Metagenome / Metatranscriptome Family F085939

Basic Information
Family ID	F085939
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	41 residues
Representative Sequence	DNGRGETINDTGVRHLRVEVQKNSPFSKLLERLSERMKKP
Number of Associated Samples	104
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.70 %
% of genes near scaffold ends (potentially truncated)	97.30 %
% of genes from short scaffolds (< 2000 bps)	90.09 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (67.568 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.225 % of family members)
Environment Ontology (ENVO)	Unclassified (24.324 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.541 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.18% β-sheet: 5.88% Coil/Unstructured: 77.94%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01432	Peptidase_M3	24.32
PF00005	ABC_tran	4.50
PF00903	Glyoxalase	3.60
PF01545	Cation_efflux	2.70
PF03960	ArsC	1.80
PF07617	DUF1579	0.90
PF13701	DDE_Tnp_1_4	0.90
PF13577	SnoaL_4	0.90
PF05114	DUF692	0.90
PF13578	Methyltransf_24	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	24.32
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	24.32
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	2.70
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	2.70
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	2.70
COG1393	Arsenate reductase or related protein, glutaredoxin family	Inorganic ion transport and metabolism [P]	1.80
COG3220	Uncharacterized conserved protein, UPF0276 family	Function unknown [S]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.57 %
Unclassified	root	N/A	32.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.57 %
Unclassified	root	N/A	32.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.57 %
Unclassified	root	N/A	32.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.54 %
Unclassified	root	N/A	32.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.21 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.41 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.41 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.60 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.41 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.60 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.41 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.60 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.41 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.60 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.41 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.60 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10039680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2646	Open in IMG/M
3300003465\|P52013CM_1066403	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300005166\|Ga0066674_10091879	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300005171\|Ga0066677_10702852	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005179\|Ga0066684_10938386	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005187\|Ga0066675_11456158	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005542\|Ga0070732_10282560	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300005586\|Ga0066691_10320155	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300005614\|Ga0068856_101111495	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300005843\|Ga0068860_102072357	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300005921\|Ga0070766_10109354	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300006042\|Ga0075368_10471794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	558	Open in IMG/M
3300006176\|Ga0070765_100660292	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300006176\|Ga0070765_101168937	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300006358\|Ga0068871_102084583	Not Available	540	Open in IMG/M
3300006755\|Ga0079222_10352744	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300006806\|Ga0079220_11493790	Not Available	579	Open in IMG/M
3300007788\|Ga0099795_10076787	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270	Open in IMG/M
3300009143\|Ga0099792_10001332	All Organisms → cellular organisms → Bacteria → Proteobacteria	9115	Open in IMG/M
3300009545\|Ga0105237_10258269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1745	Open in IMG/M
3300009545\|Ga0105237_10707867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300009551\|Ga0105238_10704042	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300009551\|Ga0105238_11301891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	753	Open in IMG/M
3300010358\|Ga0126370_12223998	Not Available	541	Open in IMG/M
3300010362\|Ga0126377_12929439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	551	Open in IMG/M
3300010396\|Ga0134126_12704237	Not Available	538	Open in IMG/M
3300010403\|Ga0134123_11423705	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300010877\|Ga0126356_10117541	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300012169\|Ga0153990_1138076	Not Available	543	Open in IMG/M
3300012202\|Ga0137363_11440927	Not Available	579	Open in IMG/M
3300012204\|Ga0137374_11267544	Not Available	511	Open in IMG/M
3300012349\|Ga0137387_11264429	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012351\|Ga0137386_10770296	Not Available	691	Open in IMG/M
3300012927\|Ga0137416_10498557	All Organisms → cellular organisms → Bacteria → Proteobacteria	1048	Open in IMG/M
3300012929\|Ga0137404_12321580	Not Available	502	Open in IMG/M
3300012988\|Ga0164306_10778999	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300013105\|Ga0157369_12274706	Not Available	549	Open in IMG/M
3300014325\|Ga0163163_13284519	Not Available	504	Open in IMG/M
3300015264\|Ga0137403_11291030	Not Available	576	Open in IMG/M
3300015356\|Ga0134073_10071446	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300016294\|Ga0182041_10465715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1089	Open in IMG/M
3300016319\|Ga0182033_10573024	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300017961\|Ga0187778_10239126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1164	Open in IMG/M
3300017972\|Ga0187781_11426059	Not Available	513	Open in IMG/M
3300018086\|Ga0187769_10544702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	876	Open in IMG/M
3300018433\|Ga0066667_10532547	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300019789\|Ga0137408_1339681	Not Available	5308	Open in IMG/M
3300020199\|Ga0179592_10505104	Not Available	517	Open in IMG/M
3300021088\|Ga0210404_10853124	Not Available	521	Open in IMG/M
3300021358\|Ga0213873_10308562	Not Available	512	Open in IMG/M
3300021377\|Ga0213874_10059266	All Organisms → cellular organisms → Bacteria → Proteobacteria	1195	Open in IMG/M
3300021384\|Ga0213876_10205748	Not Available	1046	Open in IMG/M
3300021404\|Ga0210389_11056124	Not Available	629	Open in IMG/M
3300021405\|Ga0210387_10543689	All Organisms → cellular organisms → Bacteria → Proteobacteria	1033	Open in IMG/M
3300021406\|Ga0210386_10712514	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300021406\|Ga0210386_11552084	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300021441\|Ga0213871_10229407	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300021474\|Ga0210390_10705441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	841	Open in IMG/M
3300021477\|Ga0210398_11362167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	556	Open in IMG/M
3300022724\|Ga0242665_10265784	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300022917\|Ga0247777_1117022	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300023079\|Ga0247758_1009489	All Organisms → cellular organisms → Bacteria → Proteobacteria	2641	Open in IMG/M
3300023264\|Ga0247772_1037056	All Organisms → cellular organisms → Bacteria → Proteobacteria	1004	Open in IMG/M
3300023270\|Ga0247784_1022107	All Organisms → cellular organisms → Bacteria → Proteobacteria	1489	Open in IMG/M
3300024227\|Ga0228598_1022996	Not Available	1226	Open in IMG/M
3300024249\|Ga0247676_1066285	Not Available	594	Open in IMG/M
3300024330\|Ga0137417_1076494	Not Available	2416	Open in IMG/M
3300025906\|Ga0207699_10863014	Not Available	667	Open in IMG/M
3300025913\|Ga0207695_10062685	Not Available	3837	Open in IMG/M
3300025924\|Ga0207694_10324287	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300025928\|Ga0207700_10061024	Not Available	2858	Open in IMG/M
3300027516\|Ga0207761_1045119	Not Available	860	Open in IMG/M
3300028573\|Ga0265334_10268158	Not Available	586	Open in IMG/M
3300028794\|Ga0307515_10240367	Not Available	1583	Open in IMG/M
3300028794\|Ga0307515_10936516	Not Available	501	Open in IMG/M
3300030007\|Ga0311338_11092400	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300030740\|Ga0265460_13077865	Not Available	502	Open in IMG/M
3300030843\|Ga0075392_10515003	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300030862\|Ga0265753_1012895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1133	Open in IMG/M
3300030906\|Ga0302314_10328306	All Organisms → cellular organisms → Bacteria → Proteobacteria	1747	Open in IMG/M
3300031057\|Ga0170834_107006795	Not Available	554	Open in IMG/M
3300031469\|Ga0170819_16521377	Not Available	621	Open in IMG/M
3300031546\|Ga0318538_10348666	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300031548\|Ga0307408_101629320	Not Available	613	Open in IMG/M
3300031668\|Ga0318542_10586621	Not Available	581	Open in IMG/M
3300031723\|Ga0318493_10195386	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300031723\|Ga0318493_10894587	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031753\|Ga0307477_10616892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	730	Open in IMG/M
3300031754\|Ga0307475_10526614	All Organisms → cellular organisms → Bacteria → Proteobacteria	948	Open in IMG/M
3300031793\|Ga0318548_10014452	All Organisms → cellular organisms → Bacteria	3196	Open in IMG/M
3300031796\|Ga0318576_10458786	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300031835\|Ga0318517_10037216	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300031879\|Ga0306919_11423560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	523	Open in IMG/M
3300031890\|Ga0306925_10375521	All Organisms → cellular organisms → Bacteria → Proteobacteria	1525	Open in IMG/M
3300031894\|Ga0318522_10055775	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300031894\|Ga0318522_10082568	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300031912\|Ga0306921_10042804	All Organisms → cellular organisms → Bacteria → Proteobacteria	5116	Open in IMG/M
3300032009\|Ga0318563_10000854	All Organisms → cellular organisms → Bacteria → Proteobacteria	12605	Open in IMG/M
3300032025\|Ga0318507_10246059	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300032035\|Ga0310911_10364902	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300032042\|Ga0318545_10023171	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300032054\|Ga0318570_10091142	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300032055\|Ga0318575_10104857	All Organisms → cellular organisms → Bacteria → Proteobacteria	1374	Open in IMG/M
3300032076\|Ga0306924_12057438	Not Available	587	Open in IMG/M
3300032089\|Ga0318525_10138631	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300032174\|Ga0307470_10131570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1497	Open in IMG/M
3300032805\|Ga0335078_12093568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	601	Open in IMG/M
3300032829\|Ga0335070_10230458	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300032895\|Ga0335074_10229903	Not Available	2213	Open in IMG/M
3300033290\|Ga0318519_10848152	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300033412\|Ga0310810_10265272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1876	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.18%
Host-Associated	Host-Associated	19.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.18%
Plants	Host-Associated → Plants	18.92%
Fungi	Host-Associated → Fungi	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.81%
Roots	Host-Associated → Plants → Roots	6.31%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.60%
Peat	Environmental → Terrestrial → Peat	1.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.80%
Mycelium	Host-Associated → Fungi → Mycelium	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.91%
Loam	Environmental → Terrestrial → Soil → Loam	7.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.41%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.80%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.50%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.80%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.80%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.80%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.90%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.90%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023079	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4	Environmental	Open in IMG/M
3300023264	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L151-409C-6	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030843	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100396803	3300001661	Forest Soil	ASQLAIDDGTGETLNDSGVRHLRVEVQKNSPFMRLLERLSERMKKP*
P52013CM_10664033	3300003465	Ore Pile And Mine Drainage Contaminated Soil	GASDLEIDNGRGEVLNDTGVRHLRVEVQKNTPFAKLLDRLSERVRRN*
Ga0066674_100918792	3300005166	Soil	LTIDVGTGETLNDSGVRHLRVEVQKNSPFTRLLERLSERMKKL*
Ga0066677_107028521	3300005171	Soil	IDNGTGETLNDTGVRHLRVEVQKNSPFTRLLERLSERMKKL*
Ga0066684_109383861	3300005179	Soil	IDNGTGETLNDSGVRHLRVEVQKNSPFTRLLERLSERVKKL*
Ga0066675_114561581	3300005187	Soil	LGASQLTIDNGTGETLNDSGVRHLRVEVQKNSPFTRLLERLSERVKKL*
Ga0070732_102825602	3300005542	Surface Soil	ETLNESGVRHLRVEVQKNSPFSKLLERLSERMRKP*
Ga0066691_103201553	3300005586	Soil	GETLNDTGVRHLRVQVQKNTPFTRLLERLSERIRKP*
Ga0068856_1011114951	3300005614	Corn Rhizosphere	AGELEMDNGSGEALNETGVRHLRVEVQKNTPFGRLLERLSERVRKP*
Ga0068860_1020723571	3300005843	Switchgrass Rhizosphere	GELEMDTGNGETMNESGVRHLRVEVQKNTPFGRLLERLSERVRKP*
Ga0070766_101093543	3300005921	Soil	DTGSGEGLNDSGVRHLKVSIQKNSAFSRLLERLSERVGKS*
Ga0075368_104717942	3300006042	Populus Endosphere	IDTGRGEIVNDTGVRHLRVQVQKNTPFTKLLDRLSERVRRN*
Ga0070765_1006602923	3300006176	Soil	ETINDSGVRHLRIEVQKNSPFTKLLERLSERMKKP*
Ga0070765_1011689371	3300006176	Soil	TLNESGVRHLRVEVQKNSPFSKLLERLSERMKKQ*
Ga0068871_1020845832	3300006358	Miscanthus Rhizosphere	SQLSMDTGRGETINDSGVRHLRVEVQKNSPFSKLLERLSERMKKS*
Ga0079222_103527441	3300006755	Agricultural Soil	IDAGRGETLNDTGVRHLRVEVQKNSPFSKLLERLSERMKKS*
Ga0079220_114937901	3300006806	Agricultural Soil	IDSSTGESLNDTGVRHLRVELQKNTPFSRLLERLSERVKKS*
Ga0099795_100767873	3300007788	Vadose Zone Soil	QLTIDDGTGETLNDSGVRHLRIEVQKNSPFTRLLERLSERMKKV*
Ga0099792_100013321	3300009143	Vadose Zone Soil	GETLNDSGVRHLRIEVQKNSPFTRLLERLSERMKKV*
Ga0105237_102582693	3300009545	Corn Rhizosphere	GELEMDGGNGVSMNESGVRHLRVEVQKNTPFGRLLERLSERVRKP*
Ga0105237_107078673	3300009545	Corn Rhizosphere	ALNETGVRHLRVEVQKNTPFGRLLERLSERVRKP*
Ga0105238_107040423	3300009551	Corn Rhizosphere	AGELEMDGGNGVSMNESGVRHLRVEVQKNTPFGRLLERLSERVRKP*
Ga0105238_113018912	3300009551	Corn Rhizosphere	MTIDNGRGELLNDTGVRHLEVTVQKNSPFGRLLERITERVRLG*
Ga0126370_122239981	3300010358	Tropical Forest Soil	EILNDTGVRHLQVSVKKETPFTRLLDRLSERMGKE*
Ga0126377_129294391	3300010362	Tropical Forest Soil	SELEIDKGRGELLNDTGVRHLRVEVQKDTPFSRLLDRLSERVRKT*
Ga0134126_127042372	3300010396	Terrestrial Soil	IDGGRGESINDTGVRHLRVEVQKNTPFSRLLERLSERTRKN*
Ga0134123_114237053	3300010403	Terrestrial Soil	LGASELEIDRDRGATLNDTGVRHLRVQVSKNTPFAKLLDRLSERVRRG*
Ga0126356_101175411	3300010877	Boreal Forest Soil	ILGAGELEVDNGNGESLNDTGVRHLRVEIQKNTPFSRLLERLSERTKKN*
Ga0153990_11380761	3300012169	Attine Ant Fungus Gardens	TLNDSGVRHLRVEVQKNSPFSKLLERLSERLKKV*
Ga0137363_114409271	3300012202	Vadose Zone Soil	ILGAGELEMDNGTGETMNESGVRHLRVEVQKNTPFSRLLERLSERVRKP*
Ga0137374_112675441	3300012204	Vadose Zone Soil	NGRGELLNDTGVRHLRVEVQKNTPFAKLLDRISERVRKN*
Ga0137387_112644292	3300012349	Vadose Zone Soil	DVGTGETLNDSGVRHLRVEVQKNSPFTRLLERLSERMKKL*
Ga0137386_107702961	3300012351	Vadose Zone Soil	EMDNGNGETMNESGVRHLRVEVQKNTPFGRLLERLSERVRKP*
Ga0137416_104985571	3300012927	Vadose Zone Soil	NGTGETLNDSGVRHLRVEVQKNSPFTRLLERLSERMKKV*
Ga0137404_123215801	3300012929	Vadose Zone Soil	GETMNESGVRHLRVEVQKNTPFSRLLERLSERVRKP*
Ga0164306_107789991	3300012988	Soil	AGELTIDTGNGETLNASGVRHLRVEVQKNSPFSKLLERLSERMKKP*
Ga0157369_122747062	3300013105	Corn Rhizosphere	ESINDTGVRHLRVEIQKNTPFSRLLERLSERTRKN*
Ga0163163_132845191	3300014325	Switchgrass Rhizosphere	ELEIDNGSGETLNDSGVRHLRVEVQKNTPFSRLLERLSERVKKP*
Ga0137403_112910303	3300015264	Vadose Zone Soil	NGTGETMNESGVRHLRVEVQKNTPFSRLLERLSERVRKP*
Ga0134073_100714462	3300015356	Grasslands Soil	YNGTGETLNDTGVRHLRVEVQKNSPFTRLLERLSERMKKL*
Ga0182041_104657151	3300016294	Soil	DGRTATINDSGVRHLRVEVQKNSPFSRLLERLSDRLKKS
Ga0182033_105730242	3300016319	Soil	ASQLTIDDGRGETINDSGVRHLRVEVQKNSPFSKLLERLSERLKKP
Ga0187778_102391261	3300017961	Tropical Peatland	GADELEIDNGRGERLNDTGVRHLKVAVKKDTPFARLLDRLSDRVNRG
Ga0187781_114260592	3300017972	Tropical Peatland	TLNDSGVRHLRVELRKNSPFSRLLERLSERLKKSP
Ga0187769_105447021	3300018086	Tropical Peatland	RGELLNDTGVRHLKMSVKKDTPFTRLLDRLSDRINRG
Ga0066667_105325471	3300018433	Grasslands Soil	TIDDGRGETINDTGVRHLRVEVQKNSPFTKLLERLSERLKKT
Ga0137408_13396811	3300019789	Vadose Zone Soil	MDNGTGETMNESGVRHLRVEVQKNTPFSRLLERLSERVRKP
Ga0179592_105051042	3300020199	Vadose Zone Soil	SQLTIDDGSGETLNDSGVRHLRIEVQKNSPFTRLLERLSERMKKV
Ga0210404_108531243	3300021088	Soil	GEIVNDTGVRHLQVEVQKNSPFSRLLERLSERAKKS
Ga0213873_103085622	3300021358	Rhizosphere	QLEIDNGRGESLNDSGVRHLRVQVQKNTPFSKLLDRLSERIRK
Ga0213874_100592661	3300021377	Plant Roots	ASQLSIDNGRGETLNDSGVRHLRVEVQKNSPFSKLLERLSERLKKS
Ga0213876_102057481	3300021384	Plant Roots	SQLSIDNGRGETLNDSGVRHLRVQVQKNSPFSRLLERLSERVKKT
Ga0210389_110561243	3300021404	Soil	RGEVVNDTGVRHLRVEVQKNSPFSRLLERLSERVKKS
Ga0210387_105436891	3300021405	Soil	ELEVDNGNVQTLNDTGVRHLRVEVQKNTPFSRLLERLSERTKKN
Ga0210386_107125141	3300021406	Soil	GAGELEVDHGNSQSLNEAGVRHLRVEVQKNTPFSRLLERLSERTKKN
Ga0210386_115520842	3300021406	Soil	DNGRGETLNDTGVRHLRVEIQKNTPFSRLLERLSERTKKN
Ga0213871_102294071	3300021441	Rhizosphere	SIDTGTGETLNDSGVRHLRIEVQKDSPFARLLERLSERTKKT
Ga0210390_107054413	3300021474	Soil	ELEVDNGRGETLNDTGVRHLRVEIQKNTPFSRLLERLSERSKKN
Ga0210398_113621672	3300021477	Soil	LEVDNGRGETLNDTGVRHLRVEIQKNTPFSRLLERLSERSKKN
Ga0242665_102657842	3300022724	Soil	ETLNDSGVRHLRVEVQKNSPFSRLLERLSERMKKA
Ga0247777_11170223	3300022917	Plant Litter	LEMLGASDLEIDNGRGETLNDTGVRHLRVEVQKNTPFAKLLDRISERVRKN
Ga0247758_10094891	3300023079	Plant Litter	DLEIDNGRGEILNDTGVRHLRVEVQKNTPFGKLLDRISERVRKN
Ga0247772_10370563	3300023264	Plant Litter	LEILGASDLEIDNGRGEILNDTGVRHLRVEVQKNTPFGKLLDRISERVRKN
Ga0247784_10221073	3300023270	Plant Litter	IDNGRGETLNDTGVRHLRVEVQKNTPFAKLLDRISERVRKN
Ga0228598_10229963	3300024227	Rhizosphere	GRGEILNDTGVRHLRVEMQKNSPFSRLLERLSERVKKP
Ga0247676_10662851	3300024249	Soil	ASQLSMDTGRGETINDSGVRHLRVEVQKNSPFSKLLERLSERMKKS
Ga0137417_10764941	3300024330	Vadose Zone Soil	MDSGHGETMNESGVRHLRVEVQKNTPFGRLLERLSERVRKP
Ga0207699_108630141	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LSMDTGRGETINDSGVRHLRVEVQKNSPFSKLLERLSERMKKS
Ga0207695_100626853	3300025913	Corn Rhizosphere	GASELEIDGGRGESINDTGVRHLRVEVQKNTPFGRLLERLSERVRKP
Ga0207694_103242871	3300025924	Corn Rhizosphere	AGELEMDGGNGVSMNESGVRHLRVEVQKNTPFGRLLERLSERVRKP
Ga0207700_100610243	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	DNGRGETINDTGVRHLRVEVQKNSPFSKLLERLSERMKKP
Ga0207761_10451191	3300027516	Tropical Forest Soil	LGADQLEIDSGRELLNDTGVRHLKVTIQKNTPFTRLLDRLSERLNKS
Ga0265334_102681581	3300028573	Rhizosphere	ILGASELEIDSGRGESINDTGVRHLRVEVQKNTPFSRLLERLSERTRKN
Ga0307515_102403671	3300028794	Ectomycorrhiza	GERLNDTGVRHLKVSLQKNSPFSRLLDRLSDRVGK
Ga0307515_109365162	3300028794	Ectomycorrhiza	DLEIDNGRGELLNDTGVRHLRVEVQKNTPFAKLLDRISERVRKN
Ga0311338_110924001	3300030007	Palsa	GASQLSIDVGTGETINDSGVRHLQVEVQKNSPFSKLLERLSERLRKP
Ga0265460_130778652	3300030740	Soil	SIDTGNGETLNDSGVRHLSVEVQKNSPFSRLLERLSERMRKPPAGR
Ga0075392_105150031	3300030843	Soil	GASELEIDGGRGESINDTGVRHLRVEVQKNTPFSRLLERLSERTKKN
Ga0265753_10128953	3300030862	Soil	SIDTGNGETLNESGVRHLRIEAQKGSPFARLLERLSERAKKA
Ga0302314_103283061	3300030906	Palsa	NGRGETLNDTGVRHLRVEVQKNTPFSRLLERLSERSKKN
Ga0170834_1070067951	3300031057	Forest Soil	ILGAGELEMDNGRGETINETGVRHLRVEVQKNTPFGRLLERLSERVRKP
Ga0170819_165213771	3300031469	Forest Soil	GETMNESGVRHLRVEVQKNTPFGRLLERLSERVRKP
Ga0318538_103486661	3300031546	Soil	NGTGETLNESGVRHLRVQVQKNSPFSRLLERLSERLRKT
Ga0307408_1016293201	3300031548	Rhizosphere	DNGRGELLNDTAVRHLEVTVQKNSPFSRLLERLTERVRRG
Ga0318542_105866211	3300031668	Soil	GETLNDTGVRHLRIEQQKNSPFGRLLERLSERVKKQ
Ga0318493_101953861	3300031723	Soil	GETINDSGVRHLRVEVQRNSPFSKLLERLSERLKKP
Ga0318493_108945871	3300031723	Soil	ILGASQLTIDDGRGETINDSGVRHLRVEVQKNSPFSKLLERLSERLKKP
Ga0307477_106168923	3300031753	Hardwood Forest Soil	SELTIEDGSGEVVNDTGVRHLRVEVQRNSPFSRLLERLSERVKKS
Ga0307475_105266141	3300031754	Hardwood Forest Soil	NGRGQNINDSGVRHLRVEVQKNSPFSKLLERLSERMKKS
Ga0318548_100144524	3300031793	Soil	QLSIDSGRGETLNDTGVRHLRVQVQKNSPFSKLLERLSERLKKS
Ga0318576_104587862	3300031796	Soil	DSGNGETLNESGVRHLRVEVQKNTPFRRLLERLSERVRKT
Ga0318517_100372161	3300031835	Soil	ETLNDSGVRHLRVEVQKNSPFSKLLERLSERLKKS
Ga0306919_114235601	3300031879	Soil	GESINDSAVRHLRVEVQKNSPFSKLLERLSERLKKS
Ga0306925_103755211	3300031890	Soil	RGEIINDSGVRHLRVEVQKNSPFSKLLERLSERMKKS
Ga0318522_100557751	3300031894	Soil	RGATINDSGVRHLRVEVQKNSPFSKLLERLSERLKKS
Ga0318522_100825681	3300031894	Soil	LGASHLSMDTGRGEIINDSGVRHLRVEVQKNSPFSKLLERLSERMKKS
Ga0306921_100428041	3300031912	Soil	PTINDSGVRHLRVEVQRNSPFSKLLERLSERMKKS
Ga0318563_1000085410	3300032009	Soil	LTIEDGRTATINDSGVRHLRVEVQKNSPFSRLLERLSERMKKS
Ga0318507_102460592	3300032025	Soil	GQNINDSGVRHLRVEVQKNSPFSKLLERLSERLKKP
Ga0310911_103649021	3300032035	Soil	RTATINDSGVRHLRVEVQKNSPFSRLLERLSERMKKS
Ga0318545_100231711	3300032042	Soil	TIDTGRGENINDSGVRHLRVEVQKNSPFSKLLERLSERLRKS
Ga0318570_100911421	3300032054	Soil	GETLNDTGVRHLRVQVQKNSPFSKLLERLSERLKKS
Ga0318575_101048571	3300032055	Soil	EILGASQLTIDSGRGETLNDTGVRHLRVEVQKNSPFSKLLERLSERMKKS
Ga0306924_120574382	3300032076	Soil	GRELLNDTGVRHLKVTVQKNTPFTRLLDRLSERLNKS
Ga0318525_101386311	3300032089	Soil	ASQLTIDTGRGATINDSGVRHLRVEVQKNSPFSKLLERLSERLKKS
Ga0307470_101315701	3300032174	Hardwood Forest Soil	EDGRGEIVNDTGVRHLRVEVQKNSPFSRLLERLSERVKKP
Ga0335078_120935683	3300032805	Soil	DDRGEIVNDTGVRHLQVEVQKNSPFSRLLERLSERAKKS
Ga0335070_102304582	3300032829	Soil	QGSNELINESGVRHLRVEVQKNSPFSKLLDRLSERMKKP
Ga0335074_102299033	3300032895	Soil	LAIDTGSGDSANDTGVRHLRVEVQKNTPFSRLLERLSERVKKA
Ga0318519_108481522	3300033290	Soil	SGRGETLNDTGVRHLRVQVQKNSPFSKLLERLSERLKKS
Ga0310810_102652723	3300033412	Soil	IDNGRGETINDTGVRHLRVEVQKNSPFSKLLERLSERMKKP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085939

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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