Metagenome Family F085912

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F085912
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	89 residues
Representative Sequence	AKPLTELADETGGHAEIIKGLEHEHYTPDSDTPQGGRLKAAVESIAATLRHRYLLGYEPLDGKPGWRTIHVDVDRPPNASAHARKGYYAGA
Number of Associated Samples	102
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.00 %
% of genes near scaffold ends (potentially truncated)	79.28 %
% of genes from short scaffolds (< 2000 bps)	91.89 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.396 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (12.613 % of family members)
Environment Ontology (ENVO)	Unclassified (26.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.441 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.53% β-sheet: 0.00% Coil/Unstructured: 76.47%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01980	TrmO	19.82
PF13646	HEAT_2	5.41
PF01145	Band_7	3.60
PF13174	TPR_6	2.70
PF13432	TPR_16	1.80
PF13414	TPR_11	1.80
PF03965	Penicillinase_R	1.80
PF12840	HTH_20	1.80
PF00441	Acyl-CoA_dh_1	1.80
PF00884	Sulfatase	0.90
PF04308	RNaseH_like	0.90
PF05569	Peptidase_M56	0.90
PF07638	Sigma70_ECF	0.90
PF13714	PEP_mutase	0.90
PF05163	DinB	0.90
PF02698	DUF218	0.90
PF01402	RHH_1	0.90
PF01575	MaoC_dehydratas	0.90
PF13589	HATPase_c_3	0.90
PF13472	Lipase_GDSL_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1720	tRNA (Thr-GGU) A37 N6-methylase	Translation, ribosomal structure and biogenesis [J]	19.82
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.80
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.80
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	1.80
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.90
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.90
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.40 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.40 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.40 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.97 %
Unclassified	root	N/A	3.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	71.17 %
Unclassified	root	N/A	3.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.90 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.17 %
Unclassified	root	N/A	3.60 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	1.80 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.90 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.17 %
Unclassified	root	N/A	3.60 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.17 %
Unclassified	root	N/A	3.60 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1.80 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.17 %
Unclassified	root	N/A	3.60 %
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	1.80 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.17 %
Unclassified	root	N/A	3.60 %
Phenylobacterium sp. LH3H17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	1.80 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104549434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300004156\|Ga0062589_101302999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300004157\|Ga0062590_102238021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300004480\|Ga0062592_101338887	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300004643\|Ga0062591_100870319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300005093\|Ga0062594_100259624	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300005186\|Ga0066676_11160789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300005330\|Ga0070690_100671860	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005366\|Ga0070659_102025918	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005406\|Ga0070703_10184237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300005406\|Ga0070703_10249316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300005445\|Ga0070708_100312421	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300005467\|Ga0070706_100207665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1829	Open in IMG/M
3300005471\|Ga0070698_100322398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1476	Open in IMG/M
3300005536\|Ga0070697_101386350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300005536\|Ga0070697_101535018	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005549\|Ga0070704_100017675	All Organisms → cellular organisms → Bacteria → Acidobacteria	4541	Open in IMG/M
3300005552\|Ga0066701_10784990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005556\|Ga0066707_10793763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300005568\|Ga0066703_10617534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300005615\|Ga0070702_100663477	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300005836\|Ga0074470_10393996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1578	Open in IMG/M
3300005840\|Ga0068870_10173600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300005844\|Ga0068862_100622334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300006051\|Ga0075364_10010373	All Organisms → cellular organisms → Bacteria	5626	Open in IMG/M
3300006177\|Ga0075362_10029483	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300006178\|Ga0075367_10046880	All Organisms → cellular organisms → Bacteria	2541	Open in IMG/M
3300006195\|Ga0075366_10000098	All Organisms → cellular organisms → Bacteria	35338	Open in IMG/M
3300006844\|Ga0075428_101686383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300006852\|Ga0075433_11029242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300006853\|Ga0075420_100500460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300006853\|Ga0075420_101869010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300006871\|Ga0075434_100800642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300006871\|Ga0075434_101675819	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006880\|Ga0075429_100557962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300009038\|Ga0099829_10880182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	743	Open in IMG/M
3300009111\|Ga0115026_10455639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300009156\|Ga0111538_11659389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300009162\|Ga0075423_10286300	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300010333\|Ga0134080_10107470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300010360\|Ga0126372_12379123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300011119\|Ga0105246_10269715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1360	Open in IMG/M
3300011444\|Ga0137463_1320865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012199\|Ga0137383_10058998	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2752	Open in IMG/M
3300012207\|Ga0137381_10518678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300012363\|Ga0137390_11060238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300012929\|Ga0137404_11059040	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300012930\|Ga0137407_12297602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300014324\|Ga0075352_1292395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300014326\|Ga0157380_10091848	All Organisms → cellular organisms → Bacteria	2507	Open in IMG/M
3300014745\|Ga0157377_11006636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300015200\|Ga0173480_11225090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300015372\|Ga0132256_102044400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300017947\|Ga0187785_10185279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300017959\|Ga0187779_11296185	Not Available	515	Open in IMG/M
3300018059\|Ga0184615_10314285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300018063\|Ga0184637_10802609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300018079\|Ga0184627_10085071	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300019362\|Ga0173479_10588590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300021082\|Ga0210380_10349445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300022880\|Ga0247792_1137907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300025885\|Ga0207653_10305316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300025910\|Ga0207684_10637716	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300025916\|Ga0207663_11036453	Not Available	659	Open in IMG/M
3300025922\|Ga0207646_10019793	All Organisms → cellular organisms → Bacteria	6247	Open in IMG/M
3300025936\|Ga0207670_10908039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300026075\|Ga0207708_11922146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300026304\|Ga0209240_1042946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1712	Open in IMG/M
3300026320\|Ga0209131_1076030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1820	Open in IMG/M
3300026320\|Ga0209131_1176806	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300027846\|Ga0209180_10433558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. LH3H17	742	Open in IMG/M
3300027866\|Ga0209813_10031878	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300027902\|Ga0209048_10795089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300028380\|Ga0268265_10160791	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300028802\|Ga0307503_10602571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300030002\|Ga0311350_10610653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300031713\|Ga0318496_10536238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300031740\|Ga0307468_101999007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300031765\|Ga0318554_10846915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300031854\|Ga0310904_11154567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031892\|Ga0310893_10061964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1277	Open in IMG/M
3300031908\|Ga0310900_10180608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1462	Open in IMG/M
3300031913\|Ga0310891_10194047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300031940\|Ga0310901_10411284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300031943\|Ga0310885_10274643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300031965\|Ga0326597_11589702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300032003\|Ga0310897_10588457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300032012\|Ga0310902_10787377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300032068\|Ga0318553_10339615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300032075\|Ga0310890_10106034	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300032075\|Ga0310890_11046327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300032122\|Ga0310895_10331486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300032770\|Ga0335085_11219426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300032828\|Ga0335080_10288477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1785	Open in IMG/M
3300033004\|Ga0335084_11073748	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300033004\|Ga0335084_12047988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300033408\|Ga0316605_10689450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300033412\|Ga0310810_10966732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300033417\|Ga0214471_11281962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300033433\|Ga0326726_11681344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300033486\|Ga0316624_11632980	Not Available	594	Open in IMG/M
3300033486\|Ga0316624_12125439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300033513\|Ga0316628_103780929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300033513\|Ga0316628_104174625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300033803\|Ga0314862_0128445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300033813\|Ga0364928_0199561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300034148\|Ga0364927_0031373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1320	Open in IMG/M
3300034165\|Ga0364942_0128348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300034177\|Ga0364932_0324907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300034419\|Ga0373914_0158610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.38%
Host-Associated	Host-Associated	20.72%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.17%
Plants	Host-Associated → Plants	20.72%
Aquatic	Environmental → Aquatic	7.21%
Bioremediation	Engineered → Bioremediation	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.61%
Sediment	Environmental → Aquatic → Sediment	4.50%
Roots	Host-Associated → Plants → Roots	4.50%
Floodplain	Environmental → Terrestrial → Floodplain	3.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.60%
Freshwater	Environmental → Aquatic → Freshwater	2.70%
Peat	Environmental → Terrestrial → Peat	1.80%
Metal	Engineered → Bioremediation → Metal	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.64%
Loam	Environmental → Terrestrial → Soil → Loam	14.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.50%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	4.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	4.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.60%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.50%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	4.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.90%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034419	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.3	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1045494341	3300000364	Soil	LEHYTPGSDEPPGGEVLRAAVESIATTLRHRYLLGYEPPEGKSRWRTLHVDVTHPEAAARARKGYYGGA*
Ga0062589_1013029992	3300004156	Soil	VRGLQHYSPSDDLPGGDRLKQAVESIAMTLRHRYLLGYEPPEGKQGWRAIEVEVTKRDTTPRARKGYYAGG*
Ga0062590_1022380211	3300004157	Soil	KPLIELADETGGRAEILNEREHYVPDSDEPEGQIKGAVEAIAMTLRYRYLLGYEPPPGDKGWRTIKVEVDRPASEARARKGYYPEG*
Ga0062592_1013388871	3300004480	Soil	PLVELADDTGGRAEIVRGLQHYSPGDSLPGGDHLKQAVESIAMTLRHRYLLGYEPPDGQQGWRAIEVEVTKRDTTPRARKGYYAGG*
Ga0062591_1008703191	3300004643	Soil	GGGGGFHGQRRGFDEKPLLELADDTGGRAEIVRGLQHYSPSDDLPGGDRLKQAVESIAMTLRHRYLLGYEPPEGKQGWRAIEVEVTKRDTTPRARKGYYAGG*
Ga0062594_1002596242	3300005093	Soil	GRAEIVRGLQHYSPGDSLPGGDHLKQAVESIAMTLRHRYLLGYEPPDGQQGWRAIEVEVTKRDTTPRARKGYYAGG*
Ga0066676_111607891	3300005186	Soil	EILKGIQHYTPGSDEPAGSDRLKEAVESIAMTLRHRYLLGYEPPEGKPRWRTIRVDVDRSDANARARKGYYAGG*
Ga0070690_1006718602	3300005330	Switchgrass Rhizosphere	TGGHAEIIKGLELEHYTPDSDTPQGGRLKAAVESIAATLRHRYLLGYEPLDGKPGWRTIHVDVDRPPNASAHARKGYYAGA*
Ga0070659_1020259182	3300005366	Corn Rhizosphere	LQHYTPDSDTPQGGKLKAAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0070703_101842373	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	IELADDTGGRAEILKGIQHYTPGSDDAPGSDRLKEAVESIATTLRHRYLLGYEPPEGKPKWRTIQVDVDRPQASARARKGYYAGG*
Ga0070703_102493162	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	GPRRGFDDRPLVELADDTGGRAEIVRGLQHYSPGDSLPGGDHLKQAVESIAMTLRHRYLLGYEPPDGKHGWREIEVEVTKRDTTPHARKGYYAGG*
Ga0070708_1003124213	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LIELADDTGGRAEIIKGLEHEHYTPDSDTPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPNATPRARKGYYAGA*
Ga0070706_1002076654	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LSGGPGGRNLPRRGFDGKPLIELADDTGGRAEILKGIQHYTPGSDDAPGSDRLKEAVESIATTLRHRYLLGYEPPEGKPKWRTIQVDVDRPQASTRARKGYYAGG*
Ga0070698_1003223981	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GGGRGGRGGMRHEEFDAKPLTELADDTGGHAEIIKGSGLAHYSPDSDAPTSGPLKAAVESIASTLRHRYLIGYEPLEGKPGWRTIRVDVDRPPDATPRARKGYYAGD*
Ga0070697_1013863503	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ADDTGGRAEILKGIQHYTPGSDDAPGSDRLKEAVESIATTLRHRYLLGYEPPEGKPKWRTIQVDVDRPQASARARKGYYAGG*
Ga0070697_1015350182	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GRGGRGGMRHEEFDAKPLTELADDTGGHAEIIKGSGLAHYSPDSDAPTSGPLKAAVESIASTLRHRYLIGYEPLEGKPGWRTIRVDVDRPPDATPRARKGYYAGD*
Ga0070704_1000176754	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VKGSEHYSPGQEWPGSDRLKAAVETIALTLRYRYLLGYEPPEGKPGWRSIRVEVDRPAAHPRTRKGYYAGA*
Ga0066701_107849902	3300005552	Soil	AKPLTELADDTGGRAEIIKGLEREHYTPDSETPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPDAVPRARKGYYAGA*
Ga0066707_107937631	3300005556	Soil	EGFDAKPLTELADDTGGRAEIIKGLEREHYTPDSETPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPDAVPRARKGYYAGA*
Ga0066703_106175341	3300005568	Soil	DDTGGRAEILKGIQHYIPGSDEPPGSDRLKEAVESIAMTLRHRYLLGYEPPEGKPKWRTIRVDVDRPDANPRARKGYYAGG*
Ga0070702_1006634772	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	EHYTPDSDTPQGGRLKAAVESIAATLRHRYLLGYEPLDGKPGWRTIHVDVDRPPNASAHARKGYYAGA*
Ga0074470_103939962	3300005836	Sediment (Intertidal)	GMSRKGFDAKPLQELADDTGGRAEIVKGLQHYSPDSDTPGSDELKRAVESIAMTLRHRYLLGYDPPDGKHGWREIRVEVDKPGTTPRARKGYYAGG*
Ga0068870_101736001	3300005840	Miscanthus Rhizosphere	KPLTELAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0068862_1006223343	3300005844	Switchgrass Rhizosphere	GRGGPGGMRGEGFDAKPLTELAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0075364_100103731	3300006051	Populus Endosphere	PGGMRGEGFDAKPLTELADETGGHAEIIKGLELQHYTPDSDTPQGGKLKAAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0075362_100294835	3300006177	Populus Endosphere	LADETGGHAEIIKGLELQHYTPDSDTPQGGKLKAAVESIAATLRHRYLLGYEPGDGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0075367_100468805	3300006178	Populus Endosphere	MGGRGGPGGMRGEGFDAKPLTELADETGGHAEIIKGLELQHYTPDSDTPQGGKLKAAVESIAATLRHRYLLGYEPGDGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0075366_1000009830	3300006195	Populus Endosphere	MRGEGFDAKPLTELADETGGHAEIIKGLELQHYTPDSDTPQGGKLKAAVESIAATLRHRYLLGYEPGDGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0075428_1016863831	3300006844	Populus Rhizosphere	MGTREGFDDRPLLELAEDTGGRAEILKELHYTPGSDGPGERQLQDAVERIAMTLRYRYLLGYEPPEGKKGWRAIRVEVERPASTARAKKGYYGGA*
Ga0075433_110292421	3300006852	Populus Rhizosphere	GMRREGFDAKPLIELADDTGGRAEIIKGLEREHYTPDSDTPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPNATPRARKGYYAGD*
Ga0075420_1005004602	3300006853	Populus Rhizosphere	GGFRGPRRGFDDKPLLELADDTGGRAEIVRGLQHYSPGDDIPGQDRLKQAVESIAMTLRHRYLLGYEPPDGKGGWREIEVEVSKRDTTPHARKGYYAGG*
Ga0075420_1018690102	3300006853	Populus Rhizosphere	GGPGGMRGEGFDAKPLTELADETGGHAEIIKGLELQHYTPDSDTPQGGKLKAAVESIAATLRHRYLLGYEPGDGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0075434_1008006423	3300006871	Populus Rhizosphere	AKPLNELADDTGGHAEIIKGLELEHYTPDSDTPQGGRLKAAVESIATTLRHRYLLGYEPLDGKPGWRTIHVDVERPPNATAHARKGYYAGA*
Ga0075434_1016758192	3300006871	Populus Rhizosphere	TGGHAEIIKGLEHEHYTPDSDTPQGGRLKAAVESIAATLRHRYLLGYEPLDGKPGWRTIHVDVDRPPNASAHARKGYYAGA*
Ga0075429_1005579621	3300006880	Populus Rhizosphere	RRGFDEKPLLELADDTGGRAEIVRGLQHYSPGDDIPGQDRLKQAVESIAMTLRHRYLLGYEPPDGKRGWREIEVEVTKRDTTPHARKGYYAGG*
Ga0099829_108801822	3300009038	Vadose Zone Soil	ADETGGRAEILKGAEHYTPESDTPGAGRLKGAVETIAITLRHRYLLGYEPPEGKSGWRTIQVDVDRRAASARARKGYYAGG*
Ga0115026_104556391	3300009111	Wetland	LADDTGGRAEIVRGLEHYTPATVTPGSDRLKQAVESIAMTLRHRYLLGYEPPEGKRGWREIRVEVDRPAMTAHARKGYYAGG*
Ga0111538_116593892	3300009156	Populus Rhizosphere	AKPLTELADETGGHAEIIKGLEHEHYTPDSDTPQGGRLKAAVESIAATLRHRYLLGYEPLDGKPGWRTIHVDVDRPPNASAHARKGYYAGA*
Ga0075423_102863001	3300009162	Populus Rhizosphere	LELQHYTPDSDTPQGGKLKAAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0134080_101074702	3300010333	Grasslands Soil	MRREGFDAKPVTELAYYTGGRAEIIKGLEHEHYTPDSETPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPDATPRARKGYYAGA*
Ga0126372_123791232	3300010360	Tropical Forest Soil	FDAKPLTELADDTGGRAQILKGLEHYSPDSDTPGSGKLKAAVESIASTLRHRYLIGYEPLDGKPGWRTIKVDVDRPPDANARARKGYYAG*
Ga0105246_102697152	3300011119	Miscanthus Rhizosphere	MRGEGFDAKPLTELAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0137463_13208651	3300011444	Soil	MRRGGFDAKPLTELADDTGGHAEIIKGLEQEHYTPDSDTPQGGRLKAAVESIAATLRHRYLLGYEPIDGKPGWRTIHVDVDRPPDATARARKGYYAGA*
Ga0137383_100589981	3300012199	Vadose Zone Soil	DTGGRAEILKGIQHYTPGSDEPPGSDRLKEAVESIAMTLRHRYLLGYEPPEGKPRWRTIRVDVDRSDANARARKGYYAGG*
Ga0137381_105186781	3300012207	Vadose Zone Soil	ILKGIQHYTPGSDEAPGSDRLKEAVESIAMTLRHRYLLGYEPPEGKPRWRTIRVDVDRPDASARARKGYYAGG*
Ga0137390_110602381	3300012363	Vadose Zone Soil	GGRAQILKGIQHYTPDTEDAPGSDRLKEAVESIAMTLRHRYLLGYEPPEGKARWRTIRVDVDRPDADARARKGYYAGG*
Ga0137404_110590401	3300012929	Vadose Zone Soil	GLEREHYTPDSETPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPDATPRARKGYYAGA*
Ga0137407_122976021	3300012930	Vadose Zone Soil	MRREGFDAKPLTELADDTGGRAEIIKGLEHEHYTPDSETPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPDATPRARKGYYAGA*
Ga0163162_124482672	3300013306	Switchgrass Rhizosphere	VRGLQHYSPGDSLPGGDHLKQAVESIAMTLRHRYLLGYEPPDGQQGWRAIEVEVTKRDTTPRARKGYYAGG*
Ga0075352_12923951	3300014324	Natural And Restored Wetlands	LADETGGRAVIVKGLEHYTPGKDDAPGSGPLKAAVESIAMTLRHRYLLGYDAPASRRAWRTIHVDVDRSDATARARAGYYAGE*
Ga0157380_100918486	3300014326	Switchgrass Rhizosphere	MRGEGFDAKPLTDLAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0157377_110066361	3300014745	Miscanthus Rhizosphere	MRGEGFDAKPLTELAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGRPGWRTIRVDVERPPNASAHARKGYYAGA*
Ga0173480_112250902	3300015200	Soil	MRREGFDAKPLTELADDTGGHAEIIKGLEQEHYTPDSDTPQGGRLKAAVESIAATLRHRYLLGYEPLDGKPGWRNIHVDVDRPPDATAHARKGYYAGA*
Ga0132256_1020444001	3300015372	Arabidopsis Rhizosphere	MPRRGFDDRPLLELADDTGGRAEIVKDLQHYSPGDELPGSDRLKQAVESIAMTLRHRYLLGYEPPDGKHGWREIEVEVTKRDTTPHARKGYYAGG*
Ga0187785_101852791	3300017947	Tropical Peatland	REGFDAKPLLELADETGGHAQILKGLDHYTPGSDTPASGPLKAAVESIAMTLRHRYLVGYEPPPGKPGWRTIRVEVSHPPSATARTRKGYYASS
Ga0187779_112961851	3300017959	Tropical Peatland	VKGLDHYTPGSDDPPQSGRIKAAAESIAMILRHRYLLGYEPPVEKREWRTIHVDVTRADCTARARKGYYSGD
Ga0184615_103142852	3300018059	Groundwater Sediment	MRREGFDAKPLEDLADETGGRAEIVKGLGHYTPGVEGPTSGPLKAATESIAITLRHRYLIGYEPPDGNRGWKTIRVDVDRPSTTARARKGYYSGN
Ga0184637_108026092	3300018063	Groundwater Sediment	PGGGPPGGSVWRRPAGFDARPLLDLAEETGGRAEIVKGFELEHYTPGGDGPGNSRLKEAVESIAMILRHRYLIGYESPEGKRGWRKIRVEVDRPAASARARKGYYAGG
Ga0184627_100850713	3300018079	Groundwater Sediment	ETGGRAEILKGLEHATLGNAARGSERLKQAVESIALTLRHRYLLGYEPPQGQEGWRTIRVDVDRPAAKAHARKGYYGEN
Ga0173479_105885902	3300019362	Soil	GGRPGGGRPQGMGGRSGFDAKPLQELADETGGRAEIISGLEHYKPGEDLPGGGQLRQAVESIALTLRLRYLVGYEPPEGKPGWRKVRIDVDRPDGATTRSRKGYFAEK
Ga0210380_103494451	3300021082	Groundwater Sediment	MPRRGFDERPLLELADDTGGRAEIVKDLQHYSPGDEVPGQDRLKQAVESIAMTLRHRYLLGYEPPDGKHGWREIEVEVTKRDTTPHARKGYYAGG
Ga0247792_11379072	3300022880	Soil	GGPGGMRGEGFDAKPLTELADETGGHAEIIKGLELQHYTPDSDTPQGGKLKAAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA
Ga0207653_103053162	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	GPRRGFDDRPLVELADDTGGRAEIVRGLQHYSPGDSLPGGDHLKQAVESIAMTLRHRYLLGYEPPDGKHGWREIEVEVTKRDTTPHARKGYYAGG
Ga0207684_106377161	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	WIELADDTGGRAEIIKGLEHEHYTPDSDTPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPNATPRARKGYYAGA
Ga0207663_110364531	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GKPLTELADDTGGHAEIIKGLEHYTPDSETPGSGRLKSAVESIASTLRHRYLIGYEPLEGKGGWRTIRVDVDLGELAPVPQAGK
Ga0207646_100197932	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRREGFDAKPLIELADDTGGRAEIIKGLEHEHYTPDSDTPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPNATPRARKGYYAGA
Ga0207670_109080392	3300025936	Switchgrass Rhizosphere	MRREGFDAKPLTELADETGGHAEIIKGLEHEHYTPDSDTPQGGRLKAAVESIAATLRHRYLLGYEPLDGKPGWRTIHVDVDRPPNASAHARKGYYAGA
Ga0207708_119221462	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GARAEIVKGSEHYSPGQEWPGSDRLKAAVETIALTLRYRYLLGYEPPEGKPGWRTIRVEVDRPAAHPRTRKGYYAGA
Ga0209240_10429462	3300026304	Grasslands Soil	EGFDAKPLIELADDTGGRAEIIKGLEREHYTPDSETPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPNATPRARKGYYAGA
Ga0209131_10760303	3300026320	Grasslands Soil	MRREGFDAKPLTELADDTGGRAEIIKGLEHEHYTPDSETPQGGRLKAAAESIAATLRHRYLLGYEPLEGKPGWRTIHVDVDRPPDAVPRARKGYYAGA
Ga0209131_11768061	3300026320	Grasslands Soil	IKGIDHYTPGSDEPPGSDRLKGAVESIAMTLRHRYLLGYEPPEGKPTWRTIRVDVDRPAATARTRKGYYAGG
Ga0209180_104335581	3300027846	Vadose Zone Soil	DETGGRAEILKGAEHYTPESDTPGAGRLKGAVETIAITLRHRYLLGYEPPEGKSGWRTIQVDVDRRAASARARKGYYAGG
Ga0209813_100318785	3300027866	Populus Endosphere	IKGLELQHYTPDSDTPQGGKLKAAVESIAATLRHRYLLGYEPGDGKPGWRTIRVDVERPPNASAHARKGYYAGA
Ga0209048_107950891	3300027902	Freshwater Lake Sediment	GRSGGGHRPAGFDAKPLEELADETGGRAEILKGAEHYTPGEDEPGDAPLKAAVESIAVTLRHRYLLGYEPPEGKPGWRPIRVEVDRPTATARARKGYYAGG
Ga0268265_101607915	3300028380	Switchgrass Rhizosphere	AEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGRPGWRTIRVDVERPPNASAHARKGYYAGA
Ga0307503_106025711	3300028802	Soil	AEILKEREHYSPDSDEPQGKLKEAVESIAMTLRHRYLLGYEPPAGAKGWRAIKVEVDRPPSEARTRKGYYAGS
Ga0311350_106106532	3300030002	Fen	MGGRSGFDGKPLQELADETGGRAEIIKGLEHYTPGEELPGGDRLKKAVESIALTLRHRYLVGYEPPEGKPGWRTLKIEVDRPSDATTRSRKGYFAEK
Ga0318496_105362381	3300031713	Soil	LVELAEDTGGRAEIVKGLQHYSPGDELPGSDRLKQAVESIAMTLRHRYLIGYEPPDTKRGWHEIKVEVDKPDMTPHARKGYYEGS
Ga0307468_1019990071	3300031740	Hardwood Forest Soil	GFDDRPLVELADDTGGRAEIVRGLQHYSPGDPLPGGDHLKQAVESIAMTLRHRYLLGYEPPDGQRGWREIEVEVTKRDTTPRARKGYYAGG
Ga0318554_108469151	3300031765	Soil	LQHYSPGDELPGSDRLKQAVESIAMTLRHRYLIGYEPPDTKRGWHEIKVEVDKPDMTPHARKGYYEGS
Ga0310904_111545672	3300031854	Soil	GPGGMRGEGFDAKPLTDLAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA
Ga0310893_100619642	3300031892	Soil	DEKPLLELADDTGGRAEIVRGLQHYSPGDDVPGQDRLKQAVESIAMTLRHRYLLGYEPPDGKHGWREIGVEVTKRDTTPHARKGYYAGG
Ga0310900_101806081	3300031908	Soil	GFDDRPLVELADDTGGRAEIVRGLRHYSPGDSLPGGDHLKQAVESIAMTLRHRYLLGYEPPDGQQGWRAIEVEVTKRDTTPRARKGYYAGG
Ga0310891_101940471	3300031913	Soil	GYRGPRRGFDDRPLVELADDTGGRAEIVRGLRHYSPGDSLPGGDHLKQAVESIAMTLRHRYLLGYEPPDGKHGWREIEVEVTKRDTTPHARKGYYAGG
Ga0310901_104112842	3300031940	Soil	PGGMRGEGFDAKPLTELAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA
Ga0310885_102746433	3300031943	Soil	PLTDLAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA
Ga0326597_115897022	3300031965	Soil	MNRKGFDARPLLELADETGGRAEILKERQHYAPDSDEPQGRLKEAVETIATTLRHRYLVGYEPAQVIKGWRTIKVEVERPAAEARARKGYYAGD
Ga0310897_105884572	3300032003	Soil	GGMPRRGFDDRPLLELADDTGGRAEIVKDLQHYSPGDELPGSDRLKQAVESIAMTLRHRYLLGYEPPDGKHGWREIEVEVTKRDTTPHARKGYYAGG
Ga0310902_107873772	3300032012	Soil	FDEKPLLELADDTGGRAEIVRGLQHYSPGDDVPGQDRLKQAVESIAMTLRHRYLLGYEPPDGKHGWREIEVEVTKRDTTPHARKGYYAGG
Ga0318553_103396152	3300032068	Soil	DTGGRAEIVKGLQHYSPGDELPGSDRLKQAVESIAMTLRHRYLIGYEPPDTKRGWHEIKVEVDKPDMTPHARKGYYEGS
Ga0310890_101060341	3300032075	Soil	RGEGFDAKPLTELAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA
Ga0310890_110463272	3300032075	Soil	PRGMGKPEGFDDRPLLELAEDTGGRAEILRELHYTPGSDGPGERQLQDAVERIAMTLRYRYLLGYEPPEGKKGWRAIRVEVERPASTARAKKGYYGGA
Ga0310895_103314862	3300032122	Soil	AKPLTDLAEETGGHAEIIKGLDREHYTPDSDTPQGGKLKEAVESIAATLRHRYLLGYEPGEGKPGWRTIRVDVERPPNASAHARKGYYAGA
Ga0335085_112194263	3300032770	Soil	LDHYAPGSDTPASGPLKAAVESIAMTLRHRYLVGYEPPPGKPGWRSIRVEVSHPPSATARTRKGYYASS
Ga0335080_102884771	3300032828	Soil	DTGGRAEIVKGLQHYSPGDELPGSDRLKQAVESIAMTLRHRYLIGYDPPESKRGWHEIKVEVDKPDMTPHARKGYYEGS
Ga0335084_110737483	3300033004	Soil	TGARAEIVRGLEHYTPASDTPGADKLKQAVESIAMTLRHRYLIGYEPPEGKRGWREIRVEVDKPSLTAVARRGYYSGT
Ga0335084_120479881	3300033004	Soil	DDTGGRAEIVSGLQHYTVDGEAPGSDRLKQAVESIATTLRHRYLLGYEPPEGKHGWREIKVEVDRPDATAHARKGYYAGG
Ga0316605_106894501	3300033408	Soil	DDTGGRAEIVKGLEHYTPDTVTPGNDRLKQAVESIAMTLRHRYLLGYEPPEGKRGWREIRVEVDRPAMTAHARKGYYAGG
Ga0310810_109667321	3300033412	Soil	RAEIVKGVAHYTPDSEIPGSDQLKEAVETIAVTLRHRYLLGYEPPDGKSGWREIRVDVDRPDVVARTRKGYYSGG
Ga0214471_112819622	3300033417	Soil	PGGMNRKGFDARPLLDLAEETGGRAEILKERQHYTPDSDEPQGRLKEAVETIAMTLRHRYLVGYEPAQVIKGWRTIKVEVERPAAEARARKGYYAGD
Ga0326726_116813441	3300033433	Peat Soil	DETGGRAEIVKGLEHYTPGTDEAPGSGPLKAAVESIATTLRHRYLLGYEPPAGKHEWRTIHVDVDRPDATARARRGYYAGD
Ga0316624_116329802	3300033486	Soil	KPLNELADETGGRAEIVKGLEHYTPGTDEAPGSGPLKAAAESIAMTLRHRYLLGYEPPASKGEWRTIHVDVDRTDATARARKGYYAGD
Ga0316624_121254392	3300033486	Soil	EIVKGLEHYTPDTVTPGNDRLKQAVESIAMTLRHRYLLGYEPPEGKRGWREIRVQVEKPALSALARKGYYAGT
Ga0316628_1037809292	3300033513	Soil	TGGRAEIVRGLGHYAPATVTPGDDRLKQAVESIAMTLRHRYLLGYDPPEGKNGWREIRVEVEKPALTALARKGYYAGT
Ga0316628_1041746251	3300033513	Soil	GRGAGPLSFDDKPLKQLADDTGGRAEIVRGLEHYTASAATPGSDKLKQAVESIATTLRHRYLLGYEPPEGKRGWREIRVQVDKPSLTALARKGYYAGT
Ga0314862_0128445_68_370	3300033803	Peatland	MGGHGGHKAFDEKPLLELADDTGGRAEIVRGLPHYTPDSEAPKSDRLKEAVESIAVTLRHRYLLGYDPPEGKPGWREIRVEVDRPETTARARKGYYAAGG
Ga0364928_0199561_193_501	3300033813	Sediment	GGSVWRRPAGFDARPLLDLAEETGGRAEIVKGFELEHYTPGGDGPGNSRLKEAVESIAMILRHRYLIGYESPEGKRGWRKIRVDVDRPAASARARKGYYSGG
Ga0364927_0031373_444_731	3300034148	Sediment	MRRGFDGEPLTELADETGGRAQILKGIDHYTPGSDAPPGSDRLKEAVESIAMTLRHRYLLGYEPPDGKPAWRTIRVDVDRPAATARARKGYYAGG
Ga0364942_0128348_206_427	3300034165	Sediment	VKGFELEHYTPGGDGPGNSRLKEAVESIAMILRHRYLIGYESPEGKRGWRKIRVDVDRPAASARARKGYYSGG
Ga0364932_0324907_156_443	3300034177	Sediment	MPRRGFDDRPLTELAEDTGGRAEIVKGVQHYSPGDELPGSDRLKQAVESIAMTLRHRYLLGYEPPDGTRGWHEIRVEVLKPDTTPHARKGYYAGG
Ga0373914_0158610_279_578	3300034419	Sediment Slurry	GGPATGRLGFDDKPLTQLADDTGGRAEIVKGLEHYTPDTVTPGTDRLKQAVESIAMTLRHRYLLGYEPPEGKRGWREIRVEVDRPAMTAHARKGYYAGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085912

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences