Metagenome / Metatranscriptome Family F085908

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085908
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	85 residues
Representative Sequence	VNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ
Number of Associated Samples	81
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.45 %
% of genes near scaffold ends (potentially truncated)	23.42 %
% of genes from short scaffolds (< 2000 bps)	78.38 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.054 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter (20.721 % of family members)
Environment Ontology (ENVO)	Unclassified (23.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.658 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.21% β-sheet: 40.54% Coil/Unstructured: 52.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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SCOP family	SCOP domain	Representative PDB	TM-score
b.45.2.1: PilZ domain-like	d3kyga2	3kyg	0.72
b.45.2.1: PilZ domain-like	d3kyga2	3kyg	0.72
b.45.1.4: FMN-binding split barrel	d2ptfa1	2ptf	0.66
b.45.1.4: FMN-binding split barrel	d2ptfa1	2ptf	0.66
b.45.1.0: FMN-binding split barrel	d3bpka1	3bpk	0.63
b.45.1.0: FMN-binding split barrel	d3bpka1	3bpk	0.63
b.45.1.2: FMN-binding split barrel	d1yoaa1	1yoa	0.62
b.47.1.1: Trypsin-like serine proteases	d4nsva_	4nsv	0.62
b.45.1.2: FMN-binding split barrel	d1yoaa1	1yoa	0.62
b.47.1.1: Trypsin-like serine proteases	d4nsva_	4nsv	0.62

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01668	SmpB	28.83
PF10282	Lactonase	3.60
PF01902	Diphthami_syn_2	2.70
PF01923	Cob_adeno_trans	1.80
PF08281	Sigma70_r4_2	1.80
PF13673	Acetyltransf_10	0.90
PF00034	Cytochrom_C	0.90
PF02517	Rce1-like	0.90
PF00037	Fer4	0.90
PF07691	PA14	0.90
PF01197	Ribosomal_L31	0.90
PF13517	FG-GAP_3	0.90
PF02470	MlaD	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	28.83
COG2102	Diphthamide synthase (EF-2-diphthine--ammonia ligase)	Translation, ribosomal structure and biogenesis [J]	2.70
COG0254	Ribosomal protein L31	Translation, ribosomal structure and biogenesis [J]	0.90
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
All Organisms	root	All Organisms	45.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
cellular organisms	root	All Organisms → cellular organisms	45.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	36.04 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	36.04 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	21.62 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	11.71 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	4.50 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	9.91 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	4.50 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	6.31 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	4.50 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.80 %
Chondromyces	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.05 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	6.31 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	4.50 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.80 %
Chondromyces apiculatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003322\|rootL2_10265235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1138	Open in IMG/M
3300003323\|rootH1_10211936	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	6972	Open in IMG/M
3300005333\|Ga0070677_10250554	Not Available	879	Open in IMG/M
3300005337\|Ga0070682_100006026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus	6789	Open in IMG/M
3300005337\|Ga0070682_100222950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1343	Open in IMG/M
3300005338\|Ga0068868_101117460	Not Available	726	Open in IMG/M
3300005547\|Ga0070693_100335816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1030	Open in IMG/M
3300005547\|Ga0070693_100788294	Not Available	703	Open in IMG/M
3300005548\|Ga0070665_100479012	Not Available	1255	Open in IMG/M
3300005841\|Ga0068863_100394176	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1353	Open in IMG/M
3300005995\|Ga0066790_10149523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1000	Open in IMG/M
3300006178\|Ga0075367_10608913	Not Available	694	Open in IMG/M
3300006186\|Ga0075369_10611174	Not Available	522	Open in IMG/M
3300010397\|Ga0134124_10001057	All Organisms → cellular organisms → Bacteria	22084	Open in IMG/M
3300010401\|Ga0134121_12449442	Not Available	563	Open in IMG/M
3300010877\|Ga0126356_11222394	Not Available	809	Open in IMG/M
3300012469\|Ga0150984_106697477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1314	Open in IMG/M
3300012469\|Ga0150984_122463262	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1197	Open in IMG/M
3300012469\|Ga0150984_123457666	Not Available	773	Open in IMG/M
3300012891\|Ga0157305_10019265	Not Available	1209	Open in IMG/M
3300012891\|Ga0157305_10025200	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1110	Open in IMG/M
3300012895\|Ga0157309_10184645	Not Available	643	Open in IMG/M
3300012900\|Ga0157292_10178708	Not Available	696	Open in IMG/M
3300012902\|Ga0157291_10049361	Not Available	989	Open in IMG/M
3300012909\|Ga0157290_10313073	Not Available	583	Open in IMG/M
3300012909\|Ga0157290_10466120	Not Available	508	Open in IMG/M
3300012913\|Ga0157298_10212202	Not Available	629	Open in IMG/M
3300012916\|Ga0157310_10009734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2298	Open in IMG/M
3300012929\|Ga0137404_10367548	Not Available	1263	Open in IMG/M
3300012930\|Ga0137407_10518155	Not Available	1115	Open in IMG/M
3300012943\|Ga0164241_10000396	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	84471	Open in IMG/M
3300012943\|Ga0164241_10014440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	6465	Open in IMG/M
3300012984\|Ga0164309_10000021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	92236	Open in IMG/M
3300012984\|Ga0164309_10000376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	25451	Open in IMG/M
3300012985\|Ga0164308_10000216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	30857	Open in IMG/M
3300012985\|Ga0164308_10367222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1166	Open in IMG/M
3300012988\|Ga0164306_10001466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	10481	Open in IMG/M
3300012988\|Ga0164306_10125032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1717	Open in IMG/M
3300012988\|Ga0164306_11340987	Not Available	606	Open in IMG/M
3300013306\|Ga0163162_12458167	Not Available	599	Open in IMG/M
3300014325\|Ga0163163_12791054	Not Available	545	Open in IMG/M
3300014969\|Ga0157376_10605492	Not Available	1091	Open in IMG/M
3300014969\|Ga0157376_11184838	Not Available	792	Open in IMG/M
3300014969\|Ga0157376_12507291	Not Available	555	Open in IMG/M
3300019890\|Ga0193728_1155220	Not Available	1003	Open in IMG/M
3300020199\|Ga0179592_10208443	Not Available	885	Open in IMG/M
3300021180\|Ga0210396_11727702	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300021363\|Ga0193699_10468804	Not Available	517	Open in IMG/M
3300021405\|Ga0210387_10847267	Not Available	806	Open in IMG/M
3300021475\|Ga0210392_10253744	Not Available	1247	Open in IMG/M
3300021475\|Ga0210392_10271674	Not Available	1208	Open in IMG/M
3300022870\|Ga0247782_1022171	Not Available	831	Open in IMG/M
3300022878\|Ga0247761_1000089	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15516	Open in IMG/M
3300022894\|Ga0247778_1000032	All Organisms → cellular organisms → Bacteria → Proteobacteria	234342	Open in IMG/M
3300022894\|Ga0247778_1049306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1058	Open in IMG/M
3300022897\|Ga0247764_1194853	Not Available	616	Open in IMG/M
3300022904\|Ga0247769_1072789	Not Available	890	Open in IMG/M
3300022906\|Ga0247766_1000476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	7830	Open in IMG/M
3300022908\|Ga0247779_1063273	Not Available	966	Open in IMG/M
3300022908\|Ga0247779_1115687	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300022911\|Ga0247783_1009939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2641	Open in IMG/M
3300022911\|Ga0247783_1012409	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2319	Open in IMG/M
3300022911\|Ga0247783_1026455	Not Available	1518	Open in IMG/M
3300022917\|Ga0247777_1176794	Not Available	696	Open in IMG/M
3300023070\|Ga0247755_1040909	Not Available	934	Open in IMG/M
3300023092\|Ga0247740_1002234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	7988	Open in IMG/M
3300023092\|Ga0247740_1110425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	867	Open in IMG/M
3300023097\|Ga0247757_10000093	All Organisms → cellular organisms → Bacteria → Proteobacteria	69780	Open in IMG/M
3300023264\|Ga0247772_1000059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	60403	Open in IMG/M
3300023268\|Ga0247765_1059992	Not Available	790	Open in IMG/M
3300023269\|Ga0247773_1091043	Not Available	972	Open in IMG/M
3300023269\|Ga0247773_1096869	Not Available	936	Open in IMG/M
3300023272\|Ga0247760_1000203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	67227	Open in IMG/M
3300023275\|Ga0247776_10044303	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1735	Open in IMG/M
3300025893\|Ga0207682_10303321	Not Available	749	Open in IMG/M
3300026035\|Ga0207703_11475268	Not Available	654	Open in IMG/M
3300026088\|Ga0207641_10377179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1357	Open in IMG/M
3300026095\|Ga0207676_10790518	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	925	Open in IMG/M
3300026142\|Ga0207698_12589775	Not Available	517	Open in IMG/M
3300028379\|Ga0268266_10788136	Not Available	918	Open in IMG/M
3300028652\|Ga0302166_10027730	Not Available	1131	Open in IMG/M
3300028870\|Ga0302254_10089042	Not Available	1125	Open in IMG/M
3300029980\|Ga0302298_10272431	Not Available	561	Open in IMG/M
3300029984\|Ga0311332_10048082	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2981	Open in IMG/M
3300029984\|Ga0311332_11133210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	630	Open in IMG/M
3300029987\|Ga0311334_10038111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	3384	Open in IMG/M
3300029990\|Ga0311336_11261432	Not Available	646	Open in IMG/M
3300030014\|Ga0302175_10154804	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	543	Open in IMG/M
3300030019\|Ga0311348_10359639	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300030019\|Ga0311348_10367899	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1073	Open in IMG/M
3300030114\|Ga0311333_10146310	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300030114\|Ga0311333_10350500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1185	Open in IMG/M
3300030114\|Ga0311333_11610216	Not Available	562	Open in IMG/M
3300030943\|Ga0311366_10518275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1038	Open in IMG/M
3300031231\|Ga0170824_105218644	Not Available	628	Open in IMG/M
3300031232\|Ga0302323_102140073	Not Available	636	Open in IMG/M
3300031232\|Ga0302323_103295024	Not Available	514	Open in IMG/M
3300031232\|Ga0302323_103302655	Not Available	514	Open in IMG/M
3300031456\|Ga0307513_10058795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	4083	Open in IMG/M
3300031456\|Ga0307513_10207115	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1796	Open in IMG/M
3300031456\|Ga0307513_10433424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1042	Open in IMG/M
3300031474\|Ga0170818_109383033	Not Available	587	Open in IMG/M
3300031521\|Ga0311364_10281237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1697	Open in IMG/M
3300031595\|Ga0265313_10424429	Not Available	519	Open in IMG/M
3300031616\|Ga0307508_10076813	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300031726\|Ga0302321_100681571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1151	Open in IMG/M
3300031726\|Ga0302321_102597489	Not Available	591	Open in IMG/M
3300031726\|Ga0302321_102814089	Not Available	568	Open in IMG/M
3300031938\|Ga0308175_100523413	Not Available	1264	Open in IMG/M
3300032144\|Ga0315910_11521495	Not Available	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.68%
Host-Associated	Host-Associated	24.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.68%
Plants	Host-Associated → Plants	24.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	35.14%
Plant Litter	Environmental → Terrestrial → Plant Litter	20.72%
Peat	Environmental → Terrestrial → Peat	19.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.31%
Roots	Host-Associated → Plants → Roots	6.31%
Rhizome	Host-Associated → Plants → Rhizome	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	20.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.31%
Loam	Environmental → Terrestrial → Soil → Loam	3.60%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.70%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.80%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.32%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	20.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	20.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	19.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.60%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	3.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.80%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.80%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.90%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022870	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L019-104C-5	Environmental	Open in IMG/M
3300022878	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L111-311C-4	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300022904	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L166-409R-6	Environmental	Open in IMG/M
3300022906	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L223-509R-6	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300022911	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L064-202C-5	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023070	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L096-311B-4	Environmental	Open in IMG/M
3300023092	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L148-409B-2	Environmental	Open in IMG/M
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental	Open in IMG/M
3300023264	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L151-409C-6	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300023269	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6	Environmental	Open in IMG/M
3300023272	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L171-409R-4	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028861	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029980	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rootL2_102652351	3300003322	Sugarcane Root And Bulk Soil	MNVSLTISNGGQAAIVENQGDYVVVRSSVASPPGSTLHMKHGELSVQVKVRGCKRLAEDQLPFRIEGRLVSFTRAARDLLFGKPTATSEE*
rootH1_102119361	3300003323	Sugarcane Root And Bulk Soil	MNVSLTISNGGQAAIVENQGDYVVVRSSVASPPGSTLHMKHGELSVQVKVRGCKRLAEDQLPFRIEGRLVSFTRAARDLLFGTPTATSEE*
Ga0070677_102505541	3300005333	Miscanthus Rhizosphere	SLVDGGEAAIVENQGDYVVVRSSIASPPGSTLRMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSFTRSARDALFGQT*
Ga0070682_1000060263	3300005337	Corn Rhizosphere	MNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMQHGQLPVLVKVRGCRRLSEEPLPFRIEGRLVSFTRAARETLFGQAPAD*
Ga0070682_1002229502	3300005337	Corn Rhizosphere	MNVPLSLASGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSLTRAARDALFGQTPAD*
Ga0068868_1011174601	3300005338	Miscanthus Rhizosphere	MNVPLSIVNGGEAAIVENQGDHVVLRSSVASPPGSTLSLKHGELSLQVKVRGCKRLAESELPFRIEGRLVSLTRAARDALFGLPSSD*
Ga0070693_1003358162	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNVPLSIVNGGQAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRTARDALFGREPGE*
Ga0070693_1007882941	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	TRGHATRAEGMNVALTIVRGGDAAIVENAGDYVVVRSSVASPPGSTLSMKHGELAVQVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGIASGD*
Ga0070665_1004790122	3300005548	Switchgrass Rhizosphere	MNVPLSIVPGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELSVLVKVRGCKRLAESQLPFRIEGRLISLTRVARETLFGQ*
Ga0068863_1003941762	3300005841	Switchgrass Rhizosphere	MNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVQVKVRGCKRTTEDRLPFRIEGRLVSFTRAAREALFGSDSSE*
Ga0066790_101495232	3300005995	Soil	MSEELNVALTLANGGAASIVENDGDHVTVRSSMASPPGSTLALEQRELTVQVKVRGCKRIDDSALPFRIEGRLVSLTRAGREQLFGAKPDAD*
Ga0075367_106089132	3300006178	Populus Endosphere	MSETLNVPLTLANGGAAAIVENQGDHVTLRSSAPSPPGSTLALFQRELAVQVKVRGCKRVAEDELPFRIEGRLVSLTRAGREQLFGGKSPA*
Ga0075369_106111742	3300006186	Populus Endosphere	MSETLNVPLTLANGGAAAIVENQGDHVTLRSSAPSPPGSTLALFQRELAVQVKVRGCKRVAEDELPFRIEGRLVSLTRAGRQQLFGG
Ga0134124_100010579	3300010397	Terrestrial Soil	MNVPVSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVQVKVRGCKRTTEDRLPFRIEGRLVSFTRAAREALFGSDSSE*
Ga0134121_124494422	3300010401	Terrestrial Soil	MNVALSIVSGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRSTESQLPFRIEGRLVSLTRSAREALFGHSSD
Ga0126356_112223941	3300010877	Boreal Forest Soil	VNVPLTVASGGEAAIIENQGDHVTLRSSVPSPPGSTLALLHEGLTIQVKVRGCKRLTEAEEAMPFRIEGRFVSLTRTAREKLFAP*
Ga0150984_1066974772	3300012469	Avena Fatua Rhizosphere	MNVPLSIAAGGEAAIVENQGDHVVVRSSVASPPGSTLSMRSGELVVLVKVRGCKRLAESQLPFRIEGRLVSFTRAARDALFGQEPG*
Ga0150984_1224632622	3300012469	Avena Fatua Rhizosphere	MNVPLSIVSGGDAAIVENQGDHVTLRSSVASPPGSTLSMKHGEFSVLVKVRGCKRLDEPALPFRIEGRLVSFTRAAREALFGTS*
Ga0150984_1234576662	3300012469	Avena Fatua Rhizosphere	MNVKLALAAGGDAAIVENDGDHVTVRSSVASPPGSTLALVHEGLNVQVKVRGCKRLAEPDLPFRIEGRLVSLTRAGREQLFGKADT*
Ga0157305_100192652	3300012891	Soil	VNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ*
Ga0157305_100252001	3300012891	Soil	MNVPLSLVNGGQAAIVENQGDHVVVRCSVASPPGSTLSMRYGELSLQMKVRGCKRLEESPLPFRIEGRLVSFTRAAREALFGRPASD*
Ga0157309_101846451	3300012895	Soil	IVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ*
Ga0157292_101787082	3300012900	Soil	MNVPLSLVDGGEAAIVENQGDYVVVRSSIASPPGSTLRMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSFTRSARDALFGQT*
Ga0157291_100493612	3300012902	Soil	MNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSLKHGELALQVKVRGCKRLTESQLPFRIEGRLVSLTRAARDALFGLPSSD*
Ga0157290_103130731	3300012909	Soil	GALCHAARSQGMNVQLELSAGGAAAIIEIQGDHVVLLCSVASPPGSTLNLKHGQTPVLVKVRGCKRLETSELPFRIEGRLVSFTRAARELLFKEG*
Ga0157290_104661202	3300012909	Soil	MNVPLSIANGERAALVEVSGDHVVVRSSIASPPGSTLSMKHGEHAVLVKVRGCKRLEGEDLPFRIEGRFVSLTRAARDAMLAP*
Ga0157298_102122022	3300012913	Soil	MNVPLSIVPGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELSVLVKVRGCKRLAESQLPFRIEGRLVSFTRGARDALFGQT*
Ga0157310_100097342	3300012916	Soil	MNVPLTIVSGGEAAIVENQGDFVVVRSSVASPPGSTLSMKSGELAVAVKVRGCKRLQESSLPFRIEGRLVSFTRAARETLFGQSPAD*
Ga0137404_103675482	3300012929	Vadose Zone Soil	VNVPLTVASGGEAAIIENQGDHVTLRASVPSPPGSTLALLHEGLAIQVKVRGCKRLTEAEEALPFRIEGRFVSLTRAAREKLFGP*
Ga0137407_105181551	3300012930	Vadose Zone Soil	VNVPLTVASGGEAAIIENQGDHVTLRASVPSPPGSTLALLHEGLAIQVKVRGCKRLTEAEEAMPFRIEGRFVSLTRVAREKLFAP*
Ga0164241_100003965	3300012943	Soil	MNVPLRIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMTFGALPVQVKVRGCKRLGETELPFRIEGRLVSFTRAAREAMFGSEGPSEA*
Ga0164241_100144404	3300012943	Soil	MNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMRHGELSVQVKVRGCKRLAEAELPFRIEGRLVSFTRAARETLFGNDISS*
Ga0164309_1000002140	3300012984	Soil	MNVPLSIESGGDAAIVEVQGDHVVVRSSVASPPGSTLSMKHGDFPVQVKVRGCKRLAEQQLPFRIEGRLVSFTRAAREALFGQGAT*
Ga0164309_1000037617	3300012984	Soil	MNVPLRIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMTFGALPVQVKVRGCKRLAEGELPFRIEGRLVSFTRAARDAMFGPSEA*
Ga0164308_1000021617	3300012985	Soil	MNVALTIVRGGDAAIVENAGDYVVVRSSVASPPGSTLSLKHGELAVQVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGIASGD*
Ga0164308_103672222	3300012985	Soil	MNVSLTIVSGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVQVKVRGCKRLAESQLPFRIEGRLVSFTRAAREAMFGDAASD*
Ga0164306_100014669	3300012988	Soil	MNVPLIIENGGDAAIVEVQGDHVVVRASVASPPGSTLSMKHGDLPVQVKVRGCKRLAEPQLPFRIEGRLVSFTRAAREALFGQGAI*
Ga0164306_101250323	3300012988	Soil	AAIVENQGDHVVLRSSVASPPGSTLSLKHGELSLQVKVRGCKRLAESELPFRIEGRLVSLTRAARDALFGLPSSD*
Ga0164306_113409872	3300012988	Soil	MNVPLTIESGGAAAIVEIQGDHVVVRSSVASPPGSTLSMKHGDLPVQVKVRGCKRLGEEQLPFRIEGRLVSFTRAAREALFGQGST*
Ga0163162_124581672	3300013306	Switchgrass Rhizosphere	MNVPLSIVAGGEAAIVENQGDYVVVRSSVASPPGSTLCMKHGELPVLVKVRGCKRLPESQLPFRIEGRLVSFTRVARDALFGPSATG*
Ga0163163_127910542	3300014325	Switchgrass Rhizosphere	MNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKYGELSVQVKVRGCKRLTEDQLPFRIEGRLVSFT
Ga0157376_106054922	3300014969	Miscanthus Rhizosphere	MNVPLSIANGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLAESQLPFRIEGRLVSLTRAARETLFGEAPAD*
Ga0157376_111848382	3300014969	Miscanthus Rhizosphere	MNVPLSIVNGGQAAIVENQGDYVVVRSSVASPPGSTLSMKHGELPVLVKVRGCKRLAEGQLPFRIEGRLVSFTRVARDALFGQAREGGSDPAKD*
Ga0157376_125072912	3300014969	Miscanthus Rhizosphere	MNVPLSIAKGGEAAIVENQGDHVVVRSSIASPPGSTLSMKYGELSVQVKVRGCKRLTEDQLPFRIEGRLVSFTRSAREALFGSDST*
Ga0193728_11552201	3300019890	Soil	VNVPLTIASGGDAAIIENQGDHVTLRSSVPSPPGSTLALLHEGLGIQVKVRGCKRLIEAEEALPFRIEGRFVSLTRTTREKLFGP
Ga0179592_102084432	3300020199	Vadose Zone Soil	VNVPLTVASGGEAAIIENQGDHVTLRASVPSPPGSTLALLHEGLAIQVKVRGCKRLTEAEEALPFRIEGRFVSLTRAAREKLFGP
Ga0210396_117277022	3300021180	Soil	MSEAVHVPLTLANGGPAAIVENQGDHVVVRSSVPSPPGSTLALSQQGLSVQVKVRGCKRVAEGDLPFRIEGRLVSLARTAREQLFGVKPNGA
Ga0193699_104688042	3300021363	Soil	VNVELSLAGGARAAIVENHGDHVTLRSSVASPPGSTLVLDHRGLAVQVKVRGCKRLDGELPFRIEGRLVSLTRAARE
Ga0210387_108472672	3300021405	Soil	MSEGLNVVLTLANGGAASIVENDADHVTVRSSMASPPGSTLVLRQRELTVQVKVRGCKRMDDSALPFRIEGRLVSLTRAGREQLFGAKPDAG
Ga0210392_102537442	3300021475	Soil	MSEGLNVALTLANGGAAAIVENQGDHVTVRSSIASPPGSTLTMNQQGLTVLVKVRGCKRLDDSALPFRIEGRLVSLTRAGREQLFGAKSEAT
Ga0210392_102716742	3300021475	Soil	MSEGLNVVLTLANGGAASIVENDADHVTVRSSMASPPGSTLVLRQRELTVQVKVRGCKRMDDGALPFRIEGRLVSLTRAGREQLFGAKPDAG
Ga0247782_10221711	3300022870	Plant Litter	MNVPLSIVNGGEAAIVENQGDHVVLRSSVASPPGSTLSLKHGELSLQVKVRGCKRLAESELPFRIEGRLVSLTRAARDALFGLPSSD
Ga0247761_10000899	3300022878	Plant Litter	MNVPLTISNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAARDALFGPTSAD
Ga0247778_1000032144	3300022894	Plant Litter	MNVPLTIDSGGEAAIVENQGDHVVLRSSIASPPGSTLTMKHGDLPVLVKVRGCKRLSESQLPFRIEGRLVSVTRSARDTLFGHASSD
Ga0247778_10493061	3300022894	Plant Litter	MNVPLSLVNGGQAAIVENQGDHVVVRCSVASPPGSTLSMRYGELSLQMKVRGCKRLEESPLPFRIEGRLVSFTRAAREALFGRPASD
Ga0247764_11948532	3300022897	Plant Litter	MNVLLSIAAGGEAAIVENQGDHVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQTAAD
Ga0247769_10727892	3300022904	Plant Litter	VNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ
Ga0247766_10004767	3300022906	Plant Litter	MNVPLSIVSGGEAAIVEIQGDHVVVRSSIASPPGSTLSMKHGELSVQVKVRGCKRSTEEHLPFRIEGRLVSFTRSAREALFGSDSS
Ga0247779_10632732	3300022908	Plant Litter	MNVPLSIVNGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELAVQVKVRGCKRLAEAQLPFRIEGRLVSFTRSAREALFGNDSSQ
Ga0247779_11156872	3300022908	Plant Litter	MNVPLTIVTGGEAAIVENQGDHVVVRSSIASPPGSTLSMRHGELPVLVKVRGCKRLEESQLPFRIEGRLVSFTRAARETLFGQSPAN
Ga0247783_10099391	3300022911	Plant Litter	MNVPLSIVAGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGQLSVLVKVRGCRRLTEEQLPFRIEGRLVSLTRAARETLFGQAPAD
Ga0247783_10124092	3300022911	Plant Litter	MNVPLSLVDGGEAAIVENQGDYVVVRSSIASPPGSTLRMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSFTRSARDALFGQT
Ga0247783_10264552	3300022911	Plant Litter	MNVPLTISNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQ
Ga0247777_11767941	3300022917	Plant Litter	MNVPLTIVTGGEAAIVENEGDHVVVRSSIASPPGSTLSMRHGELPVLVKVRGCKRLEESQLPFRIEGRLVSFTRAARETLFGQSPAN
Ga0247755_10409092	3300023070	Plant Litter	MNVPLTIVSGGEAAIVENQGDFVVVRSSVASPPGSTLSMKSGELAVAVKVRGCKRLQESSLPFRIEGRLVSFTRAARETLFGQSPAD
Ga0247740_10022347	3300023092	Plant Litter	MNVPLTIVTGGEAAIVENQGDHVVVRASVASPPGSTLSMRHGELPVLVKVRGCKRLEERDLPFRIEGRLVSFTRVAREALFGQASAD
Ga0247740_11104251	3300023092	Plant Litter	MNVPLSIAAGGEAAIVENQGDHVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQTAAD
Ga0247757_1000009344	3300023097	Plant Litter	MNVPLTIVTGGEAAIVENQGDHVVVRSSIASPPGSTLSMRHGELPVLVKVRGCKRLEENQLPFRIEGRLVSFTRAARETLFGQSPAN
Ga0247772_100005930	3300023264	Plant Litter	MNVPLTISNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAARDTLFGQTSAD
Ga0247765_10599921	3300023268	Plant Litter	PLSIVNGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELAVQVKVRGCKRLAEEQLPFRIEGRLVSFTRSAREALFGNDSSQ
Ga0247773_10910432	3300023269	Plant Litter	MNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELPVQVKVRGCKRLTEDLLPFRIEGRLVSFTRSAREALFGNDSSPEQ
Ga0247773_10968692	3300023269	Plant Litter	LVNGGQAAIVENQGDHVVVRCSVASPPGSTLSMRYGELSLQMKVRGCKRLEESPLPFRIEGRLVSFTRAAREALFGRPASD
Ga0247760_100020337	3300023272	Plant Litter	MNVSLSIANGGEAAIVENHGDHVVVRSSVASPPGSTLHMKHGELAVLVKVRGCKRLAEDALPFRIEGRLVSFTRVARDALFGPSASE
Ga0247776_100443031	3300023275	Plant Litter	MNVPLSIVAGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGQLSVLVKVRGCRRLTEEQLPFRIEGRLVSLTRAARE
Ga0207682_103033211	3300025893	Miscanthus Rhizosphere	NVPLSLVDGGEAAIVENQGDYVVVRSSIASPPGSTLRMKHGELPVLVKVRGCKRLAESQLPFRIEGRLVSFTRSARDALFGQT
Ga0207703_114752681	3300026035	Switchgrass Rhizosphere	MNVPLSIVSGGEAAIIENQGDHVTVRSSIASPPGSTLSMKHGEFSVLVKVRGCKRLEESELPFRIEGRLVSFTRAAREALFGTI
Ga0207641_103771792	3300026088	Switchgrass Rhizosphere	MNVPLSIVNGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGELSVQVKVRGCKRTTEDRLPFRIEGRLVSFTRAAREALFGSDSSE
Ga0207676_107905183	3300026095	Switchgrass Rhizosphere	MNVPLSIVNGGEAAIVENQGDHVVLRSSVASPPGSTLSLKHGELSLQVKVRGCKRLPDDQLPFRIEGRLVSLTRGARDALFGPGTS
Ga0207698_125897751	3300026142	Corn Rhizosphere	MNVALTIVRGGDAAIVENAGDYVVVRSSVASPPGSTLSMKHGELAVQVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGIASGD
Ga0268266_107881362	3300028379	Switchgrass Rhizosphere	MNVPLSIVPGGEAAIVENQGDHVVVRSSIASPPGSTLSMKHGELSVLVKVRGCKRLAESQLPFRIEGRLISLTRVARETLFGQ
Ga0302166_100277302	3300028652	Fen	MNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALFGHSATDVRRS
Ga0302259_10897472	3300028861	Fen	NQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALFGHSATDVRRS
Ga0302254_100890421	3300028870	Fen	VPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALFGHSATDVRRS
Ga0302298_102724312	3300029980	Fen	MKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVQVKVRGCKRLDGELPFRIEGRLVSFTRAAREALFGST
Ga0311332_100480822	3300029984	Fen	MKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLDGELPFRIEGRLVSFTRAARDALFGST
Ga0311332_111332102	3300029984	Fen	MKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVQVKVRACKRLDGELPFRIEGRLVSFTRAAREALFGST
Ga0311334_100381112	3300029987	Fen	MNVPLAIVNGGDAAIVENQGDFVVLRSSIASPPGSTLSMRHGELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAARDALFGQPSAKIES
Ga0311336_112614322	3300029990	Fen	GGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALFGHSATDVRRS
Ga0302175_101548041	3300030014	Fen	MKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLDGELPFRIEGRLVS
Ga0311348_103596391	3300030019	Fen	MNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLV
Ga0311348_103678992	3300030019	Fen	MKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLDGELPFRIEGRLVSFTRAAREALFGST
Ga0311333_101463101	3300030114	Fen	MNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRAARDALF
Ga0311333_103505002	3300030114	Fen	MKVLLSIASGGEAAIVENQGDYVVVRSSVASPPGSTLSLKHGELTVLVKVRGCKRLDGELPFRIEGRLVSFTRAARDALFGST
Ga0311333_116102162	3300030114	Fen	MMVLLSIVSGGDAAIVENQGDHVVVRSSVASPPGSTLSMKHGETPVQVKVRGCKRLDGELPFRIEGRLVSFTRTAREALFGAAS
Ga0311366_105182752	3300030943	Fen	MNVPLSIVNGGEAAIVENQGDYVVVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLTESQMPFRIDGRLVSFTRA
Ga0170824_1052186441	3300031231	Forest Soil	PERSPRGHATRAKGVNVPLTVASGGDAAIMENQGDHVTLRSSVPSPPGSTLALLHEDLAIQVKVRGCKRLTDAEQALPFRIEGRFVSLTRAAREKLFGP
Ga0302323_1021400732	3300031232	Fen	MNVPLSIVNGGQAAIVENQGDYVTVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLEDNELPFRIEGRLVSFTRAARLALFGIA
Ga0302323_1032950242	3300031232	Fen	MNVPLSIVAGGEAAIVENQGDYVVVRASVASPPGSTLSMKHGQLSVLVKVRGCRRLTEEQLPFRIEGRLVSFTRAARETLFGQAPAD
Ga0302323_1033026551	3300031232	Fen	MNVPLLVVSGGEAAIVENQGDHVVLRSSVASPPGSTLSLKHGELPVLVKVRGCRRLAEAELPFRIEGRLVSFTRLAREALFGQANEA
Ga0307513_100587954	3300031456	Ectomycorrhiza	MNVPLTIVSGGAAAIVENQGDHVVVRSSVASPPGSTLSMKHGDISVLVKVRGCKRLPEPELPFRIEGRLVSFTRAARDVLFGQASRA
Ga0307513_102071153	3300031456	Ectomycorrhiza	IVENNGDHVFVRSSVASPPGSTLTLRHGETPVLVKVRGCKRIDESELPFRIEGRLVTCTRATREAMFGALPAEPETK
Ga0307513_104334242	3300031456	Ectomycorrhiza	MNVPLSIASGGEAAIVENQGDHVVVRSSVASPPGSTLSMKHGEISVLVKVRGCKRLEENELPFRIEGRLVSFTRAAREVLFGAA
Ga0170818_1093830331	3300031474	Forest Soil	VNVPLSVASGGDAAIVENQGDHVTLRSSVPSPPGSTLALLHEDLAIQVKVRGCKRLTDAEQALPFRIEGRFVSLTRAAREKLFGP
Ga0311364_102812371	3300031521	Fen	MNVPLAIVNGGDAAIVENQGDFVVLRSSIASPPGSTLSMKHDELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGQPSSSRES
Ga0265313_104244292	3300031595	Rhizosphere	VNVELSVASGGAAAIVENQGDHVTVRSSVASPPGSTLILVHQGLTVSVKVRGCKRLDESALPFRIEGRLVSLTRAGREQLF
Ga0307508_100768134	3300031616	Ectomycorrhiza	MSEVLNVPLTLANGGAAAIVENQGDHVTVRSSVPSPPGSTLALFQQGLAVHIKVRGCKRLAESELPFRIEGRLVSLTRAEREQLFGVKPEA
Ga0302321_1006815711	3300031726	Fen	GDAAIVENQGDFVVLRSSIASPPGSTLSMKHDELAVLVKVRGCKRLAESQLPFRIEGRLVSFTRAAREALFGQPSSSRES
Ga0302321_1025974891	3300031726	Fen	MNVPLSIVSGGEAAIVENQGDHVTVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLDENELPFRIEGRLVSFTRAAREALFGAP
Ga0302321_1028140892	3300031726	Fen	MNVPLSIVNGGQAAIVENQGDYVTVRSSVASPPGSTLSMKHGELSVLVKVRGCKRLEDNELPFRIEGRLVSFTRAARLALFGIAQD
Ga0308175_1005234132	3300031938	Soil	MNVALSIVNGGEAKIVENQGDHVVVRSSVASPPGSTLSMKQGELSVLVKVRGCKRLADGELPFRIEGRLVSCTRAAREALFGRAE
Ga0315910_115214952	3300032144	Soil	MMVQLSIVNGGEAAIVENQGDFVVVRSSVASPPGSTLSMKHGELSVSVKVRGCKRLAEEPLPFRIEGRLVSFTRAAREALFGKIQSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085908

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences