Metagenome / Metatranscriptome Family F085891

Basic Information
Family ID	F085891
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	57 residues
Representative Sequence	MDSSFREQGPDTQQDPKSFLVSLPNLASIIKWLAGLIKLTEEEQEDAGIYPGRLGGE
Number of Associated Samples	87
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.09 %
% of genes near scaffold ends (potentially truncated)	19.82 %
% of genes from short scaffolds (< 2000 bps)	83.78 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Bacteria (81.982 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (19.820 % of family members)
Environment Ontology (ENVO)	Unclassified (38.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (33.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.82% β-sheet: 0.00% Coil/Unstructured: 61.18%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF12732	YtxH	37.84
PF02325	YGGT	30.63
PF04226	Transgly_assoc	8.11
PF04972	BON	5.41
PF00072	Response_reg	0.90
PF05532	CsbD	0.90
PF07311	Dodecin	0.90
PF01609	DDE_Tnp_1	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	30.63
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	8.11
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.90
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.90
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.90
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.90
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.90
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.90
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.90
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.98 %
Unclassified	root	N/A	18.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.98 %
Unclassified	root	N/A	18.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.98 %
Unclassified	root	N/A	18.02 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.92 %
Unclassified	root	N/A	18.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	18.02 %
Unclassified	root	N/A	18.02 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	6.31 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.80 %
Caldilineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.31 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	1.80 %
unclassified Caldilineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.31 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1.80 %
Caldilineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.31 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	1.80 %
Caldilineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.31 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1.80 %
Caldilineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	0.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103491494	All Organisms → cellular organisms → Bacteria	4619	Open in IMG/M
3300002120\|C687J26616_10170636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	678	Open in IMG/M
3300002123\|C687J26634_10251548	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300002124\|C687J26631_10014184	All Organisms → cellular organisms → Bacteria → Proteobacteria	2830	Open in IMG/M
3300002124\|C687J26631_10075710	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300003999\|Ga0055469_10311817	Not Available	511	Open in IMG/M
3300004061\|Ga0055487_10043196	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300004114\|Ga0062593_100210956	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300004114\|Ga0062593_100288956	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300004155\|Ga0066600_10459387	Not Available	614	Open in IMG/M
3300004157\|Ga0062590_100146845	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300005295\|Ga0065707_10858280	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005295\|Ga0065707_11043720	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006049\|Ga0075417_10093050	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300006194\|Ga0075427_10009788	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300006844\|Ga0075428_100225220	All Organisms → cellular organisms → Bacteria	2024	Open in IMG/M
3300006844\|Ga0075428_100594101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1182	Open in IMG/M
3300006876\|Ga0079217_10031669	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300006894\|Ga0079215_10045848	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300006969\|Ga0075419_10142471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1563	Open in IMG/M
3300007004\|Ga0079218_10168658	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300007004\|Ga0079218_10537945	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300009078\|Ga0105106_11004512	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300009081\|Ga0105098_10007569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3950	Open in IMG/M
3300009081\|Ga0105098_10166445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	999	Open in IMG/M
3300009081\|Ga0105098_10257621	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300009146\|Ga0105091_10018897	All Organisms → cellular organisms → Bacteria	2942	Open in IMG/M
3300009146\|Ga0105091_10310434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	771	Open in IMG/M
3300009147\|Ga0114129_10347460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1966	Open in IMG/M
3300009147\|Ga0114129_12380904	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300009153\|Ga0105094_10433780	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300009157\|Ga0105092_10010563	All Organisms → cellular organisms → Bacteria	4842	Open in IMG/M
3300009165\|Ga0105102_10872110	Not Available	517	Open in IMG/M
3300009168\|Ga0105104_10047707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2340	Open in IMG/M
3300009168\|Ga0105104_10573563	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300009171\|Ga0105101_10148291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1136	Open in IMG/M
3300009179\|Ga0115028_10285607	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300011433\|Ga0137443_1244242	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300011436\|Ga0137458_1195259	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012021\|Ga0120192_10087976	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300012045\|Ga0136623_10336403	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012204\|Ga0137374_10913992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	643	Open in IMG/M
3300012227\|Ga0137449_1025807	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300012358\|Ga0137368_10859424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	556	Open in IMG/M
3300012530\|Ga0136635_10000558	All Organisms → cellular organisms → Bacteria	10509	Open in IMG/M
3300014314\|Ga0075316_1013374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	1532	Open in IMG/M
3300014326\|Ga0157380_12485358	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300014882\|Ga0180069_1011478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1803	Open in IMG/M
3300014885\|Ga0180063_1103081	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300018084\|Ga0184629_10144097	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300018465\|Ga0190269_10734864	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300019232\|Ga0180114_1007888	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300019232\|Ga0180114_1296625	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300019238\|Ga0180112_1291172	Not Available	631	Open in IMG/M
3300019238\|Ga0180112_1339507	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300019244\|Ga0180111_1188413	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300019244\|Ga0180111_1380562	Not Available	730	Open in IMG/M
3300019257\|Ga0180115_1396730	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300019269\|Ga0184644_1483646	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300019884\|Ga0193741_1008788	All Organisms → cellular organisms → Bacteria	2658	Open in IMG/M
3300020063\|Ga0180118_1131735	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300020063\|Ga0180118_1342983	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300020065\|Ga0180113_1388390	Not Available	696	Open in IMG/M
3300020066\|Ga0180108_1204939	Not Available	876	Open in IMG/M
3300020067\|Ga0180109_1176721	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300020067\|Ga0180109_1258928	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300020068\|Ga0184649_1360499	Not Available	581	Open in IMG/M
3300021090\|Ga0210377_10074457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	2307	Open in IMG/M
3300021412\|Ga0193736_1029592	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300022185\|Ga0079039_1028894	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300025119\|Ga0209126_1044203	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300025146\|Ga0209322_10009679	All Organisms → cellular organisms → Bacteria	5025	Open in IMG/M
3300025155\|Ga0209320_10077920	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300025167\|Ga0209642_10737071	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300025313\|Ga0209431_10040595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3606	Open in IMG/M
3300025313\|Ga0209431_10998049	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300025324\|Ga0209640_10083268	All Organisms → cellular organisms → Bacteria	2764	Open in IMG/M
3300025325\|Ga0209341_10764863	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300025325\|Ga0209341_11180348	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300025946\|Ga0210126_114387	Not Available	704	Open in IMG/M
3300027526\|Ga0209968_1102274	Not Available	523	Open in IMG/M
3300027637\|Ga0209818_1209665	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300027675\|Ga0209077_1004203	All Organisms → cellular organisms → Bacteria	3801	Open in IMG/M
3300027675\|Ga0209077_1092192	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300027722\|Ga0209819_10019176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2257	Open in IMG/M
3300027722\|Ga0209819_10204458	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300027722\|Ga0209819_10287588	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300027723\|Ga0209703_1026207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2227	Open in IMG/M
3300027743\|Ga0209593_10157916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	812	Open in IMG/M
3300027743\|Ga0209593_10215636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	673	Open in IMG/M
3300027743\|Ga0209593_10256715	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300027743\|Ga0209593_10294165	Not Available	559	Open in IMG/M
3300027841\|Ga0209262_10342110	Not Available	728	Open in IMG/M
3300027880\|Ga0209481_10114508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1311	Open in IMG/M
3300027886\|Ga0209486_10458232	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300027890\|Ga0209496_10313531	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300027909\|Ga0209382_10322017	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300027909\|Ga0209382_12184886	Not Available	524	Open in IMG/M
3300027917\|Ga0209536_102036638	Not Available	687	Open in IMG/M
3300030571\|Ga0247652_1113002	Not Available	611	Open in IMG/M
3300030608\|Ga0247651_10280778	Not Available	545	Open in IMG/M
3300030635\|Ga0247627_10189255	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300031228\|Ga0299914_10156669	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300031949\|Ga0214473_10123976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3015	Open in IMG/M
3300031965\|Ga0326597_11129726	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300033417\|Ga0214471_10181151	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300033482\|Ga0316627_102337339	Not Available	561	Open in IMG/M
3300033513\|Ga0316628_102439272	Not Available	691	Open in IMG/M
3300033521\|Ga0316616_102558444	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300034157\|Ga0370506_054465	Not Available	849	Open in IMG/M
3300034158\|Ga0370507_0065779	Not Available	1109	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.19%
Host-Associated	Host-Associated	10.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	49.55%
Terrestrial	Environmental → Terrestrial	39.64%
Plants	Host-Associated → Plants	10.81%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	40.54%
Soil	Environmental → Terrestrial → Soil	39.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.91%
Sediment	Environmental → Aquatic → Sediment	5.41%
Marine	Environmental → Aquatic → Marine	3.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.90%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	36.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.32%
Loam	Environmental → Terrestrial → Soil → Loam	9.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.41%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.70%
Ice	Environmental → Aquatic → Freshwater → Ice	1.80%
Pond	Environmental → Aquatic → Freshwater → Pond	1.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.90%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	36.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	9.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.70%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	19.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	14.41%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	9.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.41%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.70%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.80%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.90%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002123	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_3	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004061	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019244	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT293_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020066	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021412	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025119	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_1 (SPAdes)	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025946	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300030571	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030608	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030635	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034157	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18	Environmental	Open in IMG/M
3300034158	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1034914949	3300000956	Soil	MDSSFREQGSDTQKAPRSFLASRRILASLIKWLAGLFRLTEEEQEEAGIYRERPGGE*
C687J26616_101706361	3300002120	Soil	MDSSFREQGPDTQQDPKSFLVSLPNLASIIKWLAGLIKLTEEEQEDAGIYPGRLGGE*
C687J26634_102515482	3300002123	Soil	MDSSFREQGPDTQQDPKSFLVSLPNLASIIKWLAGLIKLTEEEQEDAGIYPGR
C687J26631_100141845	3300002124	Soil	MHSSFREQGSGTQQDPRSFLVSLPILLASIINWLAGLIKLTEEQQEDAGIYLGRLGGE*
C687J26631_100757101	3300002124	Soil	MDSSFREQGSGTQQAPKRFLAGGLRILASLIHWLAGLISLTEEEQEAAGIYPDRLGGE*
Ga0055469_103118171	3300003999	Natural And Restored Wetlands	REQGSDTQQYSKRSWVRLLIPLSIIKWLAGLLNLTEEEQHDAGIYLDLQDHE*
Ga0055487_100431963	3300004061	Natural And Restored Wetlands	GSGTPRTPKIFFAGLQILASLISWLAGLIRLTEEEQEDAGIYLDRLGGE*
Ga0062593_1002109563	3300004114	Soil	MDSSFREQEGSDRQQDPKRSWVRLLIPLSLLKWLAGLFSLTEEEQHDAGIFLDRPDDE*
Ga0062593_1002889562	3300004114	Soil	MDSSFREQGSGTQQDSKRFLASLARLPNLIKWLVSLIKLTEEEQEEAGIYIDRLWDE*
Ga0066600_104593871	3300004155	Freshwater	MDSSAREQGSDTQQDSKRSWVSLLIPLSLIKWLAGLINLTEEEKHAAGIYFNRGDDE*
Ga0062590_1001468453	3300004157	Soil	MDSSFREQEGSDRQQDPKRFWVRLLIPLSLLKWLAGLFSLTEEEQHDAGIFLDRPDDE*
Ga0065707_108582802	3300005295	Switchgrass Rhizosphere	MDSSFREQGPGTQQDPKRFLASLPILASLIKWLVSLIKLTEEEQEQAGIYIDRMWDE*
Ga0065707_110437201	3300005295	Switchgrass Rhizosphere	MDSSFREQESGTQQDSKRFLLVDLPIIISIIERLAGLINLTEEEQEEAGIYPD
Ga0075417_100930503	3300006049	Populus Rhizosphere	MDSSLREQESGTQQDSKRFLLVNLPIIISIIEKLAGLINLTEEEQEEAGIYPDRLGGE*
Ga0075427_100097882	3300006194	Populus Rhizosphere	MDSSFREQESGTQQDSKRFLLVNLPIIISIIERLAGLINLTEEEQEEAGIYPDRLGGE*
Ga0075428_1002252204	3300006844	Populus Rhizosphere	MDSSFREQESGTQQDSKRFLLVDLPIIISIIERLAGLINLTEEEQEEAGIYPDRLGGE*
Ga0075428_1005941012	3300006844	Populus Rhizosphere	MDSSFRERESGTQQDSKRFLLVNLPIIISIIKRLAGLINLTEEEQEEAGIYPDRLGGE*
Ga0079217_100316693	3300006876	Agricultural Soil	MDHSTREQEASGTKQDPKSLLVSLPILGSLLKWLSGLVKLTEEEQEQAGIYRGRIRPE*
Ga0079215_100458484	3300006894	Agricultural Soil	MDHSTREQEASGTQQDPKSLLVSLPILGSLLKWLSGLVKLTEEEQEQAGIYRGRIRPE*
Ga0075419_101424712	3300006969	Populus Rhizosphere	MDSSFRERESGTQQDSKRFLLVNLPIIISIIERLAGLINLTEEEQEEAGIYPDRLGGE*
Ga0079218_101686582	3300007004	Agricultural Soil	MDHSTREQEASGTQQDPKSLLVSLPILGSLLQWLSGLVKLTEEEQEQAGIYRGRIRPE*
Ga0079218_105379452	3300007004	Agricultural Soil	MDSSFHEQGPGTQQAPKSFLAGLRIVASLIHWLAGLIGLTEEEREDAGVYLDRLGGE*
Ga0105106_110045122	3300009078	Freshwater Sediment	MDSSFREQESATRQAPKSFLASLQILASLILWLAGLINLTEEEQEEAGIYHGRLGGE*
Ga0105098_100075691	3300009081	Freshwater Sediment	MDSSFREQASGTQEAPKSFLAGLKILASFINRLVDLFKMTEEEREEAGIHIGRPGPGGE*
Ga0105098_101664452	3300009081	Freshwater Sediment	MDSSFREQGSGTQEAPKSFLAGLKILASLINWLAGLFNLTEEEREDAGIYFDHPEGE*
Ga0105098_102576212	3300009081	Freshwater Sediment	MDSSFPEQGSDTQEAPKSFWAGLTIFASLVKWLAGLIELTEEEREDAGIYLGRPGPGGE*
Ga0105091_100188975	3300009146	Freshwater Sediment	MDNYFDRQGQGSDTQQDQKSFLVSLPILASIIQWLASLIKLTEEEQEDAGIYLGRLRGK*
Ga0105091_103104342	3300009146	Freshwater Sediment	MDSSFREQAVGTQNEPKRFWVSLTLLASLIKRLAGLIKLTEEEQEEAGIYLGRSGRE*
Ga0114129_103474601	3300009147	Populus Rhizosphere	SAVSIHKQGRRGMDSSFREQESGTQQDSKRFLLVDLPIIISIIERLAGLINLTEEEQEEAGIYPDRLGGE*
Ga0114129_123809042	3300009147	Populus Rhizosphere	MDSSFREQEPGTQQDPKRFLAGLTIFARIIERLAGLIKWTEEEQEEAGIYPD
Ga0105094_104337802	3300009153	Freshwater Sediment	MDNSFYRQGQGSDTQQDRKRFFVSLPILASVLKWLASLIMLTEEEQENAGVYLGRLGDE*
Ga0105092_100105633	3300009157	Freshwater Sediment	MDSSFPEQGSDTQEAPKSFWAGLTILANLIKWLAGLIELTEEEREDAGIYLGRPGPGGE*
Ga0105102_108721101	3300009165	Freshwater Sediment	MDSSFHEQESGTQEAPKSFLAGLKILTSLLNWLAGLIRLTEEEREDAGIYLGRPGDE*
Ga0105104_100477075	3300009168	Freshwater Sediment	MDSSFREQGPNTQEAPRSFGAGLTILANLIKWLAGLIELTEEEREDAGSYLGRPGPGGE*
Ga0105104_105735632	3300009168	Freshwater Sediment	MDSSFREQGSGTQEAPKSFLAGLKILANLINCLAGLMNMKLTEDEREDAGIYFGRPGPGDE*
Ga0105101_101482911	3300009171	Freshwater Sediment	VDNSFPEHGAGTQQDTKSFLVSLPIIDSTIQWLASLIKLTAEEVESAGIYLGRLGGE*
Ga0115028_102856071	3300009179	Wetland	MDSSLREQVSGTQAAPPKSFLAGPKVLASLIKWLAGLVKLTEEERED
Ga0137443_12442421	3300011433	Soil	MDSSVREQGSDTQQDSNSSWVSLSIPLSLIKWLAGLIHLTEEEKHAAGIYLNRGDDE*
Ga0137458_11952591	3300011436	Soil	MDSSVREQGSDTQQDPNRSWVSLSIPLSLIKWLAGLIHLTEEEKHAAGIYLNRGDDE*
Ga0120192_100879762	3300012021	Terrestrial	MDSSIREQGSDTQKAPKGLLAGDLRILASLINWLAGLFRLMEEERENAGIYLDRLGGE*
Ga0136623_103364032	3300012045	Polar Desert Sand	MDHSTREQQASGAQQDPKRFLVSLPILGSLLQWLSSLVKLTEEEQKQAGIYRGRVRPE*
Ga0137374_109139922	3300012204	Vadose Zone Soil	MGNSIREQGSATRQDPKRFLVSLTILVSLIKWLVSLINLTEEEQQDAGIYIDRLGDE*
Ga0137449_10258073	3300012227	Soil	MDSSVREQGSDTQQDSTSSWVSLSIPLSLIKWLAGLIHLTEEEKHAAGIYLNRGDDE*
Ga0137368_108594241	3300012358	Vadose Zone Soil	MGNSIREQGSATRQDPKRFLVSLTILVSLIKWLVSLINFTEEEQQDAGIYIDRLGDE*
Ga0136635_1000055815	3300012530	Polar Desert Sand	MDHSTREQQASGAQHDPKRFLVSLPSLGSILQWLSSLVKLTEEEQKQAGTYRGRVRPE*
Ga0075316_10133742	3300014314	Natural And Restored Wetlands	MDNSFHRQGQGSDTQQDRKSFLVSLPILDSIIKWLASLIKLTEEEQEKAGIYLGRLGGK*
Ga0157380_124853581	3300014326	Switchgrass Rhizosphere	MDSSFREQESETEQQPKRSFLNLRIPASIIQWLVGILHLTEEEQENAGI
Ga0180069_10114782	3300014882	Soil	MDSSFREQGSGAQQDPKRFFVSLPILPSIIKWLASLIKLTEEEREDAGIYLGRLGGE*
Ga0180063_11030812	3300014885	Soil	MDRSYREQGSGTQQDPKRFWVSPTMLASLIKWLAGLIKLTEEEWEDAGVYIGRVGGE*
Ga0184629_101440972	3300018084	Groundwater Sediment	MDSSFREQGPGTQQDPKRFFVRLRILPGLIKWLVSLIKLTEEEQEEAGIYIDRLWDE
Ga0190269_107348642	3300018465	Soil	MDSSFREQGSDTQKAPRSFLASRRILASLIKWLAGLFRLTEEEQEEAGIYRERPGGE
Ga0180114_10078882	3300019232	Groundwater Sediment	MDSSVREQGSDTQQDSKSSWVSLLIPLSLIKWLAGLIHLTEEEKHAAGIYLNRGDDE
Ga0180114_12966252	3300019232	Groundwater Sediment	MDSSVHEQGSDTQQDPNRSWVSLSIPLSLIKWLAGLINLTEEEKHAAGIYLNRG
Ga0180112_12911721	3300019238	Groundwater Sediment	HKLGRLEMDSSVREQGSDTQQDSKSSWVSLLIPLSLIKWLAGLINLTEEEKHAAGIYLNRGDDE
Ga0180112_13395072	3300019238	Groundwater Sediment	MDSSLREQGSDRQPDPKRSWVRLLIPLSIIKWLAGLINLTEEEQHDAGIYLDR
Ga0180111_11884133	3300019244	Groundwater Sediment	MDSSFREQGPDRQQDLERSWASLLIPLSIIKWLAGLINLTEEEQHDAGIYLDRRDDE
Ga0180111_13805622	3300019244	Groundwater Sediment	MDSSFREQGSDTQQDPNRSWVSLLIPLSLIKWLAGLINLTEEEKHAAGIYLNRGDDE
Ga0180115_13967302	3300019257	Groundwater Sediment	MDSSAREQGSDTQQDPNRSWVSLSIPLSLIKWLAGLIHLTEEEKHAAGIYLKRGDDE
Ga0184644_14836461	3300019269	Groundwater Sediment	MDSSFREQGSGTQQDSKRFLASLARLPNLFKWLVSLIKLTEEEQEEAGIYIDRLWDE
Ga0193741_10087883	3300019884	Soil	MDHSTREQEASGTQQDPKSFLVRLPILGSLLQWLSSLVKLTEEEQEQAGIYRGRTRPE
Ga0180118_11317354	3300020063	Groundwater Sediment	MDSSFREQGSDRQQDPKRSWMSLLIPLSIIKWLAGLLNLTEEEQHDAGIYLDRRDDE
Ga0180118_13429831	3300020063	Groundwater Sediment	MDRSYREQGSGTQQDPKRFWVSPTMLASLKWLAGLIKLTEEEWEDAGVYIGRVGGE
Ga0180113_13883901	3300020065	Groundwater Sediment	MDSSFREQGSDTQQDPNRSWVSLSIPLSLIKWLAGLIHLTEEEKHAAGIYLNRGDDE
Ga0180108_12049393	3300020066	Groundwater Sediment	MDSSVREQGSDTQQDLNMSWVSLSIPLSLIKWLAGLIHLTEEEKHAAGIYLNRGDDE
Ga0180109_11767212	3300020067	Groundwater Sediment	MDSSFREQGSATQQDPKRFLASLAILASHLMRLASLITLTEEEQEEAGIHHGRLGGE
Ga0180109_12589282	3300020067	Groundwater Sediment	MDSSFGKQGPDMQQDPKSFLVSLPILENIIKWLAGLIKLTEEEQEDAGIYPGRLGGE
Ga0184649_13604992	3300020068	Groundwater Sediment	MDRSFRKQGSDRQHDAKRSWVSLLIPFSIITWLAGLINLTKEEQHAAGIYLDRRDDE
Ga0210377_100744573	3300021090	Groundwater Sediment	MDNSIHEQGSAAQQDPKRFLVSLTVLASILNWLAGFIWLTEEEQEEAGIFLDRPGGG
Ga0193736_10295922	3300021412	Soil	MDHSTREQEASGTQQDPKSFLVSLPILGSILQWLSSLVKLTEEEQEQAGIYRGRTRPE
Ga0079039_10288941	3300022185	Freshwater Wetlands	MDNSFHRQGQGSDTQQDRKSFLVSLPILASILQWLASLFKLTEEEQEEAGIYLGHLGGE
Ga0209126_10442032	3300025119	Soil	MDSSFREQGPNTQQDPKSFLVSLPNLASVIKWLAGLIKLTEEEQEDAGIYPGRLGGE
Ga0209322_100096796	3300025146	Soil	MDSSFREQGPDTQQDPKSFLVSLPNLASVIKWLAGLIKLTEEEQEDAGIYPGRLGGE
Ga0209320_100779202	3300025155	Soil	MDSSFREQGPDTQQDPKSFLVSLPNLASIIKWLAGLIKLTEEEQEDAGIYPGRLGGE
Ga0209642_107370712	3300025167	Soil	MDTSIREQGPGTQQNPKSFLVNLPVLDSLIKWLAGLIKLTKDEQEAAGIYLGRPGGE
Ga0209431_100405957	3300025313	Soil	MDNSFHRQGQGSDTQQDRKSFLFLVSLPILASIIQWLASLIKLTEEEQEDAGIYLGRLGG
Ga0209431_109980491	3300025313	Soil	MHSSFREQGSGTQQDPRSFLVSLPILLASIINWLAGLIKLTEEQQEDAGIYLGRLGGELI
Ga0209640_100832685	3300025324	Soil	MDSSFREQGPNTQQDPKSFLVSLPNLASVIKWLAGLIKLTEEEQEDAGIYPGRLGRE
Ga0209341_107648631	3300025325	Soil	MDNSFHRQGQGSDTQQDQKSFLVSLPILASIIQWLASLIKLTEEEQEDAGIYLGPRQAL
Ga0209341_111803481	3300025325	Soil	MHSSFREQGSGTQQDPRSFLVSLPILLASIINWLAGLIKLTEEQQEDAGIYLGRLGGE
Ga0210126_1143871	3300025946	Natural And Restored Wetlands	GTPRTPKIFFAGLQILASLISWLAGLIRLTEEEQEDAGIYLDRLGGE
Ga0209968_11022742	3300027526	Arabidopsis Thaliana Rhizosphere	MDSSFGEQERGTQQNPNRLLAGLTIFAKIIERLASLIKWTEEEQEDAGIYPYRLGGE
Ga0209818_12096652	3300027637	Agricultural Soil	MDHSTREQEASGTQQDPKSLLVSLPILGSLLKWLSGLVKLTEEEQEQAGIYRGRIRPE
Ga0209077_10042036	3300027675	Freshwater Sediment	MDSSFREQGSGTQEAPKSFLAGLKILASLINWLAGLFNLTEEEREDAGIYFDHPEGE
Ga0209077_10921922	3300027675	Freshwater Sediment	MDNYFDRQGQGSDTQQDQKSFLVSLPILGSIIQWLASLIKLTEEEQEDAGIYLGRLRGK
Ga0209819_100191762	3300027722	Freshwater Sediment	MDSSFREQASGTQEAPKSFLAGLKILASFINRLVDLFKMTEEEREEAGIHIGRPGPGGE
Ga0209819_102044581	3300027722	Freshwater Sediment	MDSSFREQGSGTQEAPKSFLAGLKILASLINWLAGLFNLTEEEREDAGIYFDHPE
Ga0209819_102875882	3300027722	Freshwater Sediment	MDSSFPEQGSDTQEAPKSFWAGLTIFASLVKWLAGLIELTEEEREDAGIYLGRPGPGGE
Ga0209703_10262076	3300027723	Freshwater Sediment	VDSSFREQGSNTQRDSKRFLASLTILASLIKWLAGLIKLTEEEQEDAGIYLGRLG
Ga0209593_101579162	3300027743	Freshwater Sediment	MDNSFHRQGQGSDTQQDQKSFLVSQPILASIIQWLASLIKLTEEEQEDAGIYLGRLRGK
Ga0209593_102156362	3300027743	Freshwater Sediment	MDSSFREQAVGTQNEPKRFWVSLTLLASLIKRLAGLIKLTEEEQEEAGIYLGRSGRE
Ga0209593_102567152	3300027743	Freshwater Sediment	MDSSFREQGSGTQEAPKSFLAGLKILANLINCLAGLMNMKLTEDEREDAGIYFGRPGPGD
Ga0209593_102941651	3300027743	Freshwater Sediment	QGSDTQEAPKSFWAGLTILANLIKWLAGLIELTEEEREDAGIYLGRPGPGGE
Ga0209262_103421103	3300027841	Freshwater	REQGSDTQQDSKRSWVSLLIPLSLIKWLAGLINLTEEEKHAAGIYFNRGDDE
Ga0209481_101145083	3300027880	Populus Rhizosphere	MDSSFREQESGTQQDSKRFLLVDLPIIISIIERLAGLINLTEEEQEEAGIYPDRLGGE
Ga0209486_104582323	3300027886	Agricultural Soil	MDSSFHEQGPGTQQAPKSFLAGLRIVASLIHWLAGLIGLTEEEREDAGVYLDRLGGE
Ga0209496_103135312	3300027890	Wetland	MDSSLRGQGSGTQAAPKSFLAGLKILASLINWLASLVRLTEEEREDAGIYLGRQGGE
Ga0209382_103220175	3300027909	Populus Rhizosphere	MDSSFRERESGTQQDSKRFLLVNLPIIISIIERLAGLINLTEEEQ
Ga0209382_121848861	3300027909	Populus Rhizosphere	MDSFFRERESGTQQDSKRFLLVNLPIIISIIERLAGLINLTEEEQEEAGIYPDRLGGE
Ga0209536_1020366383	3300027917	Marine Sediment	MDNSFHRQGSGGAQQGPKSFLVSLPILDSIIKWLASLIRLTEEEQENAGVYLGRLGDE
Ga0247652_11130022	3300030571	Soil	MDSSFREQDPGTQQNPKRFLAGLIIFARIIERLAGLIKWTEEEQEDAGIYPERLGGE
Ga0247651_102807782	3300030608	Soil	MDSSFSEQEPGTQQNPKRFLAGLIIFARIIERLAGLIKWTEEEQEEAGIYPDRLGGE
Ga0247627_101892551	3300030635	Soil	MDSSFREQGSDTQRAPRSFLASLRILASLIINWLAGLLRLTEDEQEEAG
Ga0299914_101566693	3300031228	Soil	MDGSVREQGSGTPQAPKSFLAGLPILASLIRWLAGFITLTEEEQEDAGVYLDRLGGE
Ga0214473_101239763	3300031949	Soil	MDSSFGEQGPDMQQDPKSFLVSLPILDNIIKWLAGLIKLTEEEQEDAGIYLGRLGGE
Ga0326597_111297262	3300031965	Soil	MDSSFREQGSGTQQDPKRILLSLPILASLIKWLAGLIKLTEEELEDAGIYLGRLRGE
Ga0214471_101811513	3300033417	Soil	MDSPFREQGSGTQQDPKRILVSLPILASLIKWLAGLIKLTEEEREDAGIYLGRLRGE
Ga0316627_1023373392	3300033482	Soil	SFREQESGTQEAPKSFLAGLKILTSLINWLAGLLKLTEEEREDVGIYLGRPGPGGE
Ga0316628_1024392722	3300033513	Soil	MDSSFRGQGSGTQDAPKSFLASLRFLASLINWLAGLVILTEEEQEDAGIYLGRMWDE
Ga0316616_1025584442	3300033521	Soil	MDSSFREQESGTQEAPKSFLAGLKILTSLINWLAGLLKLTEEEREDVGIYLGRPGPGGE
Ga0370506_054465_45_218	3300034157	Untreated Peat Soil	MDSSFREQESDSQQDPKRSWMSLLIPISIIKWLAGLINLTDEERQDAGIYLDRRDDE
Ga0370507_0065779_867_1040	3300034158	Untreated Peat Soil	MDSSFREQVAGTQEPPKGLEAGLKILASLINWLVGIIKLTEEEREDAGIYLGHQGDE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085891

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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