Metagenome Family F085887

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085887
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	117 residues
Representative Sequence	MKRSHQMLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAVAIGKARRMRASVGLGFTAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQTKLG
Number of Associated Samples	98
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	36.94 %
% of genes near scaffold ends (potentially truncated)	30.63 %
% of genes from short scaffolds (< 2000 bps)	83.78 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.595 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (39.640 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.964 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.92% β-sheet: 0.00% Coil/Unstructured: 31.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF14534	DUF4440	27.93
PF08818	DUF1801	7.21
PF00144	Beta-lactamase	6.31
PF08897	DUF1841	3.60
PF00903	Glyoxalase	1.80
PF13620	CarboxypepD_reg	1.80
PF12681	Glyoxalase_2	1.80
PF00141	peroxidase	0.90
PF04366	Ysc84	0.90
PF13505	OMP_b-brl	0.90
PF02357	NusG	0.90
PF01012	ETF	0.90
PF13673	Acetyltransf_10	0.90
PF01161	PBP	0.90
PF00067	p450	0.90
PF10677	DUF2490	0.90
PF13578	Methyltransf_24	0.90
PF13474	SnoaL_3	0.90
PF00583	Acetyltransf_1	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	7.21
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	7.21
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	7.21
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	6.31
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	6.31
COG2367	Beta-lactamase class A	Defense mechanisms [V]	6.31
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.90
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.90
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.90
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.90
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	0.90
COG2124	Cytochrome P450	Defense mechanisms [V]	0.90
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.59 %
Unclassified	root	N/A	5.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.59 %
Unclassified	root	N/A	5.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.59 %
Unclassified	root	N/A	5.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.81 %
Unclassified	root	N/A	5.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.80 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10.81 %
Unclassified	root	N/A	5.41 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	3.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.42 %
Unclassified	root	N/A	5.41 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	4.50 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	3.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.80 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.80 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.80 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.80 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.42 %
Unclassified	root	N/A	5.41 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	4.50 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	3.60 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.80 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.80 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.90 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.42 %
Unclassified	root	N/A	5.41 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	4.50 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	3.60 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.80 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	1.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.80 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.90 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.42 %
Unclassified	root	N/A	5.41 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	4.50 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.60 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.80 %
Roseomonas gilardii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas gilardii	1.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.80 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.90 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.42 %
Unclassified	root	N/A	5.41 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	4.50 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	3.60 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.80 %
Roseomonas gilardii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas gilardii	1.80 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.80 %
Geodermatophilus ruber	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus ruber	0.90 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_10437268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
2162886012\|MBSR1b_contig_14101092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
2199352025\|deepsgr__Contig_121568	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_102012056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1121	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_102014802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300000789\|JGI1027J11758_12725050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300000891\|JGI10214J12806_10354238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	773	Open in IMG/M
3300004157\|Ga0062590_102318567	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	565	Open in IMG/M
3300005093\|Ga0062594_102961588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005168\|Ga0066809_10107814	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005169\|Ga0066810_10103502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300005289\|Ga0065704_10307282	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300005294\|Ga0065705_10014361	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300005294\|Ga0065705_10302766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300005295\|Ga0065707_10197650	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300005330\|Ga0070690_100790488	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005332\|Ga0066388_101002832	All Organisms → cellular organisms → Bacteria → Proteobacteria	1399	Open in IMG/M
3300005332\|Ga0066388_105506021	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300005333\|Ga0070677_10789814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas gilardii	541	Open in IMG/M
3300005335\|Ga0070666_11239465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005340\|Ga0070689_100856512	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005340\|Ga0070689_100904731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300005343\|Ga0070687_100080480	All Organisms → cellular organisms → Bacteria	1776	Open in IMG/M
3300005347\|Ga0070668_101998519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005353\|Ga0070669_100041863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3333	Open in IMG/M
3300005354\|Ga0070675_101312420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300005355\|Ga0070671_100749318	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300005356\|Ga0070674_100738243	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005365\|Ga0070688_100417048	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300005441\|Ga0070700_101823128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas gilardii	524	Open in IMG/M
3300005457\|Ga0070662_100398744	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005466\|Ga0070685_10671663	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300005518\|Ga0070699_100194394	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300005526\|Ga0073909_10213377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300005543\|Ga0070672_100008861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6909	Open in IMG/M
3300005544\|Ga0070686_100565144	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005616\|Ga0068852_100264042	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300005617\|Ga0068859_100210766	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300005618\|Ga0068864_101499451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	677	Open in IMG/M
3300005713\|Ga0066905_100624545	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005719\|Ga0068861_100877262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	848	Open in IMG/M
3300005764\|Ga0066903_100643163	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300005937\|Ga0081455_10093159	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300006046\|Ga0066652_100060023	All Organisms → cellular organisms → Bacteria	2912	Open in IMG/M
3300006194\|Ga0075427_10070634	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300006237\|Ga0097621_100517510	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300006844\|Ga0075428_100137861	Not Available	2652	Open in IMG/M
3300006852\|Ga0075433_10222480	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300006852\|Ga0075433_10407855	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300006854\|Ga0075425_100349930	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300006871\|Ga0075434_102144422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300006904\|Ga0075424_101074860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300006904\|Ga0075424_101698852	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300006969\|Ga0075419_11275996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus ruber	544	Open in IMG/M
3300009094\|Ga0111539_10051595	All Organisms → cellular organisms → Bacteria	4898	Open in IMG/M
3300009094\|Ga0111539_10431748	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300009100\|Ga0075418_11403613	Not Available	758	Open in IMG/M
3300009147\|Ga0114129_10590732	All Organisms → cellular organisms → Bacteria → Acidobacteria	1440	Open in IMG/M
3300009147\|Ga0114129_10862072	Not Available	1150	Open in IMG/M
3300009147\|Ga0114129_12451997	Not Available	624	Open in IMG/M
3300009156\|Ga0111538_10397427	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300009156\|Ga0111538_10965534	All Organisms → cellular organisms → Bacteria → Acidobacteria	1078	Open in IMG/M
3300009176\|Ga0105242_10272329	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300009177\|Ga0105248_10014120	All Organisms → cellular organisms → Bacteria	8790	Open in IMG/M
3300010360\|Ga0126372_11318305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300010397\|Ga0134124_12407631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300010399\|Ga0134127_11222816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300010400\|Ga0134122_11223685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300010403\|Ga0134123_10645811	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1025	Open in IMG/M
3300012478\|Ga0157328_1029993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300012948\|Ga0126375_10341295	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300012960\|Ga0164301_10896960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300013308\|Ga0157375_11423606	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300014745\|Ga0157377_10129769	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300014968\|Ga0157379_10020651	All Organisms → cellular organisms → Bacteria	5828	Open in IMG/M
3300014969\|Ga0157376_10532425	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300015371\|Ga0132258_10583102	All Organisms → cellular organisms → Bacteria	2806	Open in IMG/M
3300015373\|Ga0132257_101255077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300015374\|Ga0132255_100215830	All Organisms → cellular organisms → Bacteria	2722	Open in IMG/M
3300017792\|Ga0163161_10239723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1410	Open in IMG/M
3300018031\|Ga0184634_10305236	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	730	Open in IMG/M
3300018053\|Ga0184626_10272538	Not Available	706	Open in IMG/M
3300018067\|Ga0184611_1012567	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300018072\|Ga0184635_10003658	All Organisms → cellular organisms → Bacteria → Acidobacteria	4814	Open in IMG/M
3300018073\|Ga0184624_10021746	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M
3300018074\|Ga0184640_10361861	Not Available	657	Open in IMG/M
3300018081\|Ga0184625_10463776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300018468\|Ga0066662_12544418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	540	Open in IMG/M
3300020005\|Ga0193697_1005207	All Organisms → cellular organisms → Bacteria	3186	Open in IMG/M
3300020016\|Ga0193696_1001125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8391	Open in IMG/M
3300025903\|Ga0207680_10085135	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300025903\|Ga0207680_10672282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	742	Open in IMG/M
3300025926\|Ga0207659_10651573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	900	Open in IMG/M
3300025931\|Ga0207644_11125413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300025933\|Ga0207706_10358701	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300025934\|Ga0207686_10142756	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300025934\|Ga0207686_11499562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	556	Open in IMG/M
3300025936\|Ga0207670_10379307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1126	Open in IMG/M
3300025940\|Ga0207691_10006855	All Organisms → cellular organisms → Bacteria	10992	Open in IMG/M
3300025941\|Ga0207711_10606934	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300026023\|Ga0207677_11765485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300026121\|Ga0207683_12091507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300027821\|Ga0209811_10042224	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300027873\|Ga0209814_10309582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	688	Open in IMG/M
3300031226\|Ga0307497_10401781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300031716\|Ga0310813_11028731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300031908\|Ga0310900_11753423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300032012\|Ga0310902_11185344	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300032174\|Ga0307470_10608960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300032421\|Ga0310812_10375152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300034176\|Ga0364931_0242022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	592	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.25%
Environmental	Environmental	47.75%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.25%
Terrestrial	Environmental → Terrestrial	41.44%
Aquatic	Environmental → Aquatic	6.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.51%
Sediment	Environmental → Aquatic → Sediment	6.31%
Floodplain	Environmental → Terrestrial → Floodplain	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.51%
Loam	Environmental → Terrestrial → Soil → Loam	12.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.41%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.90%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.22%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	7.21%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012478	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0742.00000070	2162886012	Miscanthus Rhizosphere	MKRSHQMLTQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLG
MBSR1b_0554.00006320	2162886012	Miscanthus Rhizosphere	MKRSHQMLTQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLG
deepsgr_01939610	2199352025	Soil	MLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAVAIGKARRTRASVGLGFTAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQTKLGG
INPhiseqgaiiFebDRAFT_1020120562	3300000364	Soil	MKQSHQRLSQSLSILFGAVPFAFALVRAVRTGDDLRYLWVALAALLGATIAMAMRKANRTRTSISLGLTAFVLATLLATAMALLLGTQFGPGVWLVGSGFGGCLAVSSGLYALAHPRNI*
INPhiseqgaiiFebDRAFT_1020148021	3300000364	Soil	MKQSHQRLSQSLSILFGAVPFAFALVRAVRTGDDLRYLWVALAALLGATLAIAIGKTRTSLGLGFTAFVLATLFATAAALLLGTQFGPGVWLVGSGFGGCLAVSSGLYALVHPRNI*
JGI1027J11758_127250503	3300000789	Soil	MKQSHQRLSQSLSILFGAVPFAFALLRAVRTGDDLRYLWVALAALLGATIAMAMRKANRTRTSISLGLTAFVLATLLATAMALLLGTQFGPGVWLVGSGFGGCLAVSSGLYALAHPRNI*
JGI10214J12806_103542381	3300000891	Soil	MQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADCTQTFAGLGLTAFVLATLLATTVAMFLGTQLGPGVLVVASGFGGCFAASC
Ga0062590_1023185671	3300004157	Soil	MMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATTVAMFLGTQLGPGVLVVASGFGGCFAASCVLYALAQS*
Ga0062594_1029615882	3300005093	Soil	VRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0066809_101078142	3300005168	Soil	MKRSHQMLSQSLAILFGAVPFAFGLVRAVRTGDDFRYLWVALASVLGAAMAVAIGKARRTQASVGLGFTAFVLATLFATTAALFLGTQFGPGVLVVGSGFGGCLAVGSVLYALGGQTKLGG*
Ga0066810_101035022	3300005169	Soil	MKRSHQRRGSQSLSILFGAVPFAFALVRAVRTGYDLRYLWVAFGAFLGATIAVAIRKAPGTRTLLCLGLTAFVLATLLATAVALFLGTQFGPGVLVVGSGFGGCLAAGSVLYALGGQTKLGG*
Ga0065704_103072822	3300005289	Switchgrass Rhizosphere	VTIDLAPPKKRGSQSLSILIGAVPFAFALVRAVRTGDDLRYLWVALAALLGATIAMAIGKARRMRTSLGLGLTVFVLATLLATAVALFLGTRFGPGVLLVGSGCGACLAASCVLYALAHPRNI*
Ga0065705_100143614	3300005294	Switchgrass Rhizosphere	MKRSHQMLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVAFASLLGATIAIAIGKVRRTRASVVLGVTAFVFATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYTLGGQTKLGGSGDSG*
Ga0065705_103027663	3300005294	Switchgrass Rhizosphere	VTIDLAPPKKRGSQSLSILIGAVPFAFALIRAVRTGDDLRYLWVALAALLGATIAMAIGKARRMRTSLGLGLTVFVLATLLATAVALFLGTRFGPGVLLVGSGCGACLAASCVLY
Ga0065707_101976503	3300005295	Switchgrass Rhizosphere	MKRSHQMLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVAFASLLGATIAIAIGKVRRTRASVVLGVTAFVFATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYTLGGQTKLGGS
Ga0070690_1007904881	3300005330	Switchgrass Rhizosphere	TQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0066388_1010028322	3300005332	Tropical Forest Soil	LLAILFGAVPFAFGVIRAVRTGYDLRYLWVAFAALLGAAMAMAMRKTQRMRTSLRLGLTAFVLATLFATAVALLLGTQFGPGMLLVVSGYGACLAASCVLYALAHPLRLT*
Ga0066388_1055060211	3300005332	Tropical Forest Soil	MRRSYQYSASQSLSILFGAVPFAFALIRAVRTGYDLRYLWVAFAALLGAAIAMAMRRAQRIRTLLRLGLTAFVLATLFATAMALLLGTQFGLGVLLVGAGYGACLSASCVLF
Ga0070677_107898141	3300005333	Miscanthus Rhizosphere	MLTQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVAPASLLGATIAIAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0070666_112394651	3300005335	Switchgrass Rhizosphere	SILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATTVAMFLGTQLGPGLLVVAFGFGGCFAASCVLYALAQS*
Ga0070689_1008565121	3300005340	Switchgrass Rhizosphere	MKQSHQRLSQSLSILFGAVPFAFALVRAVRTGDDLRYLWVALAALLGAALAMAIGKTRTSLGLGFTAFVLATLFATAAALLLGTQFGPGLWLVASGCGGCLAVSSVLYALAHPRNI*
Ga0070689_1009047311	3300005340	Switchgrass Rhizosphere	MLTQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG
Ga0070687_1000804803	3300005343	Switchgrass Rhizosphere	MLTQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKIGG*
Ga0070668_1019985192	3300005347	Switchgrass Rhizosphere	SLSILFGAVPFAFALVRAVRTGDDFRYLWVAFGALLGATIAIAMRKAERTRTFAGLGLTAFVLATLLATAVALFLGTQFGPGVLVVGSGFGGCLAASCVLYALAQS*
Ga0070669_1000418633	3300005353	Switchgrass Rhizosphere	MMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATTVAMFLGTQLGPGLLVVAFGFGGCFAASCVLYALAQS*
Ga0070675_1013124201	3300005354	Miscanthus Rhizosphere	MLSQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRASVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0070671_1007493182	3300005355	Switchgrass Rhizosphere	MKQSHQRLSQSLSILFGAVPFAFALVRAVRTGDDFRYLWIALASLLGATIAVAIGKVRRTRASVALGFRAFVLATLFATAAALFLGTQFGPGVLVVASGFGGCLAASSVLYALGGQTKLGG*
Ga0070674_1007382431	3300005356	Miscanthus Rhizosphere	MLTQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0070688_1004170481	3300005365	Switchgrass Rhizosphere	MLTQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0070700_1018231281	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLTQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0070662_1003987443	3300005457	Corn Rhizosphere	FAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATTVAMFLGTQLGPGLLVVAFGFGGCFAASCVLYALAQS*
Ga0070685_106716632	3300005466	Switchgrass Rhizosphere	MMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYLWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATAVALFLGTQFGPGVLVVGSGFGGCLAASCVLYALAQS*
Ga0070699_1001943943	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATAVALFLGTQFGPGVLVVGSGFGGCLAASCVLYALAQS*
Ga0073909_102133771	3300005526	Surface Soil	EMKRSHQMLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAVAIGKARRMRASVGLGFTAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQAKLGG*
Ga0070672_1000088611	3300005543	Miscanthus Rhizosphere	MKRSHQMLTQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0070686_1005651441	3300005544	Switchgrass Rhizosphere	PFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATTVAMFLGTQLGPGLLVVAFGFGGCFAASCVLYALAQS*
Ga0068852_1002640423	3300005616	Corn Rhizosphere	MKRSHQMLTQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0068859_1002107664	3300005617	Switchgrass Rhizosphere	VTRVRVSTEMKQSHQRLSQSLSILFGAVPFAFALVRAVRTGDDLRYLWVALAALLGAALAMAIGKTRTSLGLGFTAFVLATLFATAAALLLGTQFGPGLWLVASGCGGCLAVSSVLYALAHPRNI*
Ga0068864_1014994511	3300005618	Switchgrass Rhizosphere	MMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADCTQTFAGLGLTAFVLATLLATTVAMFLGTQLGPGVLVVASGFGGCFAASCVLYALAQS*
Ga0066905_1006245452	3300005713	Tropical Forest Soil	MLFGAVPFAFALIRAVRTGYDLRYLWVAFAALLGAAITMPMRRAQRMRTLLPLGLTAFVLATLFATAMALLLGTQFGLGVLLVGSGYGACLAVSCMLYVLAHPPRLT*
Ga0068861_1008772622	3300005719	Switchgrass Rhizosphere	RSCRTTEMMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYLWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATAVALFLGTQFGPGVLVVGSGFGGCLAASCVLYALAQS*
Ga0066903_1006431632	3300005764	Tropical Forest Soil	MKRSYQYSASQSLSILFGAVPFAFALIRAVRTGYDLRYLWVAFAALLGAAIAMAMRRAQRMRTLLHLGLTAFVLATLFATAMALLLGTQFGLGVLLVGLGYGACLAASCVLFALAHPANLT*
Ga0081455_100931593	3300005937	Tabebuia Heterophylla Rhizosphere	MKRSYRDSGSQLLSILCGAVPFAFALVRAVRTGYDLRYLWVAFAALLGAAMAMAMRKAQRMRTSLRLGLTAFVLATLFATAVALLLGTRFGPGVLLVGSGFGACF
Ga0066652_1000600234	3300006046	Soil	MKQSHQRLSQSLSILFGAVPFAFALVRAVRTGDDLRYLWVALAALAGATIAMAIGKARRTRTSLGLGFSAFVVATLFATAVALLLGTQLGPGVWLVGSGFGGCLAASCVLYGLAHPRNT*
Ga0075427_100706341	3300006194	Populus Rhizosphere	LFALVRAVRTGDDFRYLWVAFGALLGAALAIAMRKAERTRTFVGLGLTAFVLATLLATAVAVFLGTQLGPGVLVVGSGFGGCLAASCVLYALAQS*
Ga0097621_1005175103	3300006237	Miscanthus Rhizosphere	NEMKRSHQMLTQSLAILFGAVPFAFAGVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0075428_1001378612	3300006844	Populus Rhizosphere	MKRSHQKRGSQSLSILLGAVPFAFALVRAVRTGYDLRYLWVALAALLGATMAMAMRKADRTRTSLGLALTAFVFATLLATAVALLLGTQFGPGVLLVGSGFGGCLAASCVLYALAHPQNI
Ga0075433_102224802	3300006852	Populus Rhizosphere	MKRSYQYSVSQSLSILFGAVPFAFALVRAIRTGDDLRYLWVAFAALLGAAIAEAMRRAQRVRTLLRLGLTAFVLATLLATAMALLLGTQFGPGVLLVGSGYGACLAASCVLYALAHPRNT
Ga0075433_104078552	3300006852	Populus Rhizosphere	MLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALAALVGATIAMAIGKARRTRASVGLGFRAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQTKLGG*
Ga0075425_1003499302	3300006854	Populus Rhizosphere	MKRSHQQLSQSLSILFGAVPFAFALVRAVRTGHDLRYLWVALAALLGAAIAMAMRESRPTRTVVGLGLTAFVLATLLGMAMALFLGTQLGPGVMVVGSGVGCCLAASCVLYALAHGRNI*
Ga0075434_1021444221	3300006871	Populus Rhizosphere	MKRSHEKLFQSLSILFGAVPFAFALVRAVRTGDDLRYLWVALAALLGATIAMAMRKANRTRTSIGLGLTAFVLATLLAMAMALFLGTQFSPGMWLVGTGCGGCLAASSVLYALAHPRN
Ga0075424_1010748601	3300006904	Populus Rhizosphere	MLFQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALAALVGATIAMAIGKARRTRASVGLGFRAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQTKLGG*
Ga0075424_1016988522	3300006904	Populus Rhizosphere	MKRSYQYSASQLLSILFGAVPFAFALIRAVRTGDDLRYLWVAFAALPGAAIALAMRRARRTRTLLRLGVTAFVLATLLATAMALLLGTQFGPGMLLVGSGYGACLAASCVLYILAHPQSLT*
Ga0075419_112759961	3300006969	Populus Rhizosphere	MKRSHQKRGSQSLSILLGAVPFAFALVRAVRTGWDLRYLWVALAALLGATMAMAMRKADRTRTSLGLVLTAFVFATLLATAVALLLGTQFGPGVLLVGSGYGVCLAASCVLYAFAHPRSI
Ga0111539_100515956	3300009094	Populus Rhizosphere	MMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADCTQTFAGLGLTAFVLATLLATTVAMFLGTQLGPGVLVVASGFGGCLAASCVLYALAQS*
Ga0111539_104317482	3300009094	Populus Rhizosphere	MKRSRQNLFQSLSILIGAVPFAFALVRAVRTGDDLRYLWVALAALLGATIAMAIGKGRRTRTLIGLGFTSFILATALATVVALLLGTQFGPGLWLVGSGFGGCLAASSVLHALGGRTNSADEETVNEL*
Ga0075418_114036132	3300009100	Populus Rhizosphere	MKRSHQKRGSQSLSILLGAVPFAFALVRAVRTGWDLRYLWVALAALLGATMAMAMRKAHRTRTSLGLAVTAFVLATLLATAVALFLGTQFGPGVLLVASGFGGCLAASCVLYALAHP
Ga0114129_105907322	3300009147	Populus Rhizosphere	MKRSYQYSVSQSLSILFGAVPFAFALVRAIRTGDDLRYLWVAFAALLGAAIAEAMRRAQRVRTLLRLGLTAFVLATLLATAMALLLGTQFGPGVLLVGSGYGACLAASCVLYALAHPRHLT*
Ga0114129_108620721	3300009147	Populus Rhizosphere	KRGSQSLSILLGAVPFAFALVRAVRTGYDLRYLWVALAALLGATIAMAMRKADRTRTALGLGLTAFVLATLLATAVALFLGTQFGPGVLLVGSGFGGCLAASCVLYALAHPRNI*
Ga0114129_124519972	3300009147	Populus Rhizosphere	MKRSHQKRGSQSLSILLGAVPFAFALVRAVRTGWDLRYLWVALAALLGATMAMAMRKADRTRTSLGLALTAFVFATLLATAVALLLGTQFGPGVLLVGSGFGGCLAASCVLYALAHPRN
Ga0111538_103974272	3300009156	Populus Rhizosphere	MKRSRQNLFQSLSILIGAVPFAFALVRAVRTGDDLRYLWVALAALLGATIAMAIGKARRTRTLIGLGFTSFILATALATVVALLLGTQFGPGLWLVGSGFGGCLAASSVLHALGGRTNSADEETVNEL*
Ga0111538_109655342	3300009156	Populus Rhizosphere	MKRSYQYSVSQSLSILFGAVPFAFALVRAIRTGDDLRYLWVAFAALLGAAIAEAMRRAQRVRTLLRLGLTAFVLATLLATAMALLLGTQFGPGVLLVGSGYGACLAASCVLYALADPRHLT*
Ga0105242_102723292	3300009176	Miscanthus Rhizosphere	MKRSHQMLTQSLAILFGAVPFAFAGVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0105248_100141203	3300009177	Switchgrass Rhizosphere	MKRSHQMLTQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0126372_113183052	3300010360	Tropical Forest Soil	MKPSYRSLASQSLSILFGAVPFAFAFVRAVRTGDDLRYLWLAFAALLGAAIAMAMRRALRMRTSLGLAFTAFVLATLLATAMALLLGTQFGPGVLVVGSGFGVCLAASCVLQALAYPRNT
Ga0134124_124076311	3300010397	Terrestrial Soil	MKRSHQMLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVAFASLLGATIAIAIGKIRRTRASVVLGVTAFVFATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYTLSGQTKLGGSGDSG*
Ga0134127_112228161	3300010399	Terrestrial Soil	MKRSHQMLTQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSAFGFCCAASCVFHALAHPPAPSIYRYR*
Ga0134122_112236851	3300010400	Terrestrial Soil	MKRSHQMLTQSLAILFGAVPFAFAGVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0134123_106458112	3300010403	Terrestrial Soil	MGCVPEITDRSTDNGTTKMKPSHQKRGSQSLSILFGAVPFAFALVRAVRTGHDLRYLWVALAALLGATIAMAMRRALRTRTSLSLGSTAFVLATLLATAMALFLGTQFGPGVLLVASGCGGCLAASCVLYTLAHPR*
Ga0157328_10299931	3300012478	Arabidopsis Rhizosphere	MLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAVAIGKARRMRASVGLGFTAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQAKLGG*
Ga0126375_103412951	3300012948	Tropical Forest Soil	MLFGAVPFAFALIRAVRTGYDLRYLWVAFAALLGAAITMAMRRAQRMRTLLPLGLTAFVLATLFATAMALLLGTQFGLGVLLVGSGYGACLAVSCMLYVLAHPPRLT*
Ga0164301_108969601	3300012960	Soil	MKRSHQMLSQSLAILFGAVPFAFGLVRAVRTGDDFRYLWVALASLLGATIAVAIGKARRMRASVGLGFTAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLY
Ga0157375_114236062	3300013308	Miscanthus Rhizosphere	MMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADCTQTFAGLGLTAFVLATLLATTVAMFLGTQLGPGLLVVAFGFGGCFAASCVLYALAQS*
Ga0157377_101297691	3300014745	Miscanthus Rhizosphere	AVPFAFALVRAVRTGDDFRYLWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATAVALFLGTQFGPGVLVVGSGFGGCLAASCVLYALAQS*
Ga0157379_100206514	3300014968	Switchgrass Rhizosphere	MKRSHQMLTQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRASVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0157376_105324252	3300014969	Miscanthus Rhizosphere	MLTQSLAILVGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG*
Ga0132258_105831022	3300015371	Arabidopsis Rhizosphere	MKPSHQKLSQSLSILFGVIPFAFGLVRAVRTGDDLRYVWVAFGALVGATIALAITRAQRMASVGLGLTAFTLATLLATAVALLLGTQFGPGVLVVTSGCGGCLAASCVLYARAHPRSI*
Ga0132257_1012550771	3300015373	Arabidopsis Rhizosphere	MKRSHEKLFQSLSILFGAVPFAFALVRAVRTGDDLRYLWVALAALQGATIAMAMRKANRTRTSIGLGLTAFVLATLLAMAMALFLGTQFSPGMWLVGTGCGGCLAASSVLYALA
Ga0132255_1002158303	3300015374	Arabidopsis Rhizosphere	MLSQSLAILFGAVPFAFGLVRAVRTGDDFRYLWVALASLLGATIAVAIGKARRMRASVGLGFTAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQAKLGG*
Ga0163161_102397233	3300017792	Switchgrass Rhizosphere	MLTQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRASVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG
Ga0184634_103052362	3300018031	Groundwater Sediment	MKQSHQKRGSQSLSILFGAVPFAFALIRAVRTGHDLRYLCVALAALLGATIAMAMRKAHRTRTSLGLGLTAFVLASLLGTTVALFLGTQFGPGVLLVGSGYGGCLAASCVLY
Ga0184626_102725382	3300018053	Groundwater Sediment	MKPSHQKRGSQSLSILFGAVPFAFALIRAVRTGHDLRYLWVALAALLGATIAMAMRKAHRTRTSLGLGLTAFVLASLLGTTVALFLGTQFGPGVLLVGSGYGGCLAASCVLYALAHPRNI
Ga0184611_10125671	3300018067	Groundwater Sediment	MKQSHQKRGSQSLSILFGAVPFAFALIRAVRTGHDLRYLWVALAALLGATIAMAMRKAHRTRTSLGLGLTAFVLASLLGTTVALFLGTQFGPGVLLVGSGYGGCLAASCVFYALAHPRHI
Ga0184635_100036584	3300018072	Groundwater Sediment	MKQSHQKRGSQSLSILFGAVPFAFALIRAVRTGHDLRYLWVALAALLGATIAVAIRKAHRTRTSLGLGLTAFVLATLLATAMALFLGTQFGPGVLLVASGCGGCLAASCVLYALAHPRNI
Ga0184624_100217462	3300018073	Groundwater Sediment	MKPSHQKRGSQSLSILFGAVPFAFALIRAVRTGHDLRYLWVALAALLGATIAMAMRKAHRTRTSLGLGLTAFVLATLLGTTVALFLGTQFGPGVLLVASGCGGCLAASCVLYALAHPRNI
Ga0184640_103618612	3300018074	Groundwater Sediment	MKQSHQKRGSQSLSILFGAVPFAFALVRAVRTGHDLRYLWVALAALLGATIAVAIRKAHRTRTSLGLGLTAFVLATLLGTTVALFLGTQFGPGVLLVGSGYGGCLAASCVFYALAHPRHI
Ga0184625_104637762	3300018081	Groundwater Sediment	FALIRAVRTGHDLRYLWVALAALLGATIAMAMRKAHRTRTSLGLGLTAFVLATLLGTTVALFLGTQFGPGVLLVASGCGGCLAASCVLYALAHPRNI
Ga0066662_125444181	3300018468	Grasslands Soil	MKQSHQRLSQSLSILFGAVPFAFALVRAVRTGDDLRYLWVALAALAGATIAMAIGKARRTRTSLGLGFSAFVVATLFATAVALLLGTQLGPGVWLVGSGFGGCLAASCVLYGLAHPRNT
Ga0193697_10052074	3300020005	Soil	MKPSHQKRGSQSLSILFGAVPFAFALVRAVRTGHDLRYLWVALAALLGATIAMAMRRAHRTRTSLGLGSTAFVLATLLATAMALFLGTQFGPGVLLVGSGFGVCLAASCVLYALAHPRNI
Ga0193696_10011256	3300020016	Soil	VCVPEITDRSTDNGTTKMKPSHQKRGSQSLSILFGAVPFAFALVRAVRTGHDLRYLWVALAALLGATIAMAMRRAHRTRTSLGLGSTAFVLATLLATAMALFLGTQFGPGVLLVGSGFGVCLAASCVLYALAHPRNI
Ga0207680_100851353	3300025903	Switchgrass Rhizosphere	MLTQSLAILFGAVPFAFAGVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG
Ga0207680_106722822	3300025903	Switchgrass Rhizosphere	MMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATTVAMFLGTQLGPGLLVVAFGFGGCFAASCVLYALAQS
Ga0207659_106515731	3300025926	Miscanthus Rhizosphere	MLSQSLAILFGAVPFAFAIVRAVRTGDDFRYLWVALASLLGATIAIAIGKVRRTRASVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG
Ga0207644_111254131	3300025931	Switchgrass Rhizosphere	MKQSHQRLSQSVSILFGAVPFAFALVRAVRTGDDFRYLWIALASLLGATIAVAIGKVRRTRASVALGFRAFVLATLFATAAALFLGTQFGPGVLVVASGFGGCLAASSVLYALGGQTKLG
Ga0207706_103587012	3300025933	Corn Rhizosphere	MKQSHQKRASRSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATAVALFLGTQFGPGVLVVGSGFGGCLAASCVLYALAQS
Ga0207686_101427563	3300025934	Miscanthus Rhizosphere	MKRSHQMLTQSLAILFGAVPFAFAGVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLG
Ga0207686_114995621	3300025934	Miscanthus Rhizosphere	TKMKPSHQKRGSQSLSILFGAVPFAFALVRAVRTGHDLRYLWVALAALLGATIAMAMRRALRPRTSLSLGSTAFVLATLLATAMALFLGTQFGPGVLLVASGCGGCLAASCVLYTLAHPR
Ga0207670_103793072	3300025936	Switchgrass Rhizosphere	MMQSHQKRASQSLSILFGAVPFAFALVRAVRTGDDFRYVWVAFGALLGATIAIAMRKADRTRTFAGLGLTAFVLATLLATTVAMFLGTQLGPGVLVVASGFGGCFAASCVLYALAQS
Ga0207691_100068559	3300025940	Miscanthus Rhizosphere	MLTQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG
Ga0207711_106069342	3300025941	Switchgrass Rhizosphere	MKQSHQRLSQSLSILFGAVPFAFALVRAVRTGDDLRYLWVALAALLGAALAMAIGKTRTSLGLGFTAFVLATLFATAAALLLGTQFGPGLWLVASGCGGCLAVSSVLYALAHPRNI
Ga0207677_117654851	3300026023	Miscanthus Rhizosphere	MKRSHQMLTQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRVSVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTK
Ga0207683_120915071	3300026121	Miscanthus Rhizosphere	WTPFAIVRAVRTGDDFRYLWVALASLLGATIAMAIGKVRRTRASVGLGFTAFVFATLFATAAALFLGTQFGPGVLVVGSSFGGCLAASGVLYTLGGQTKLGG
Ga0209811_100422242	3300027821	Surface Soil	MKRSHQMLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAVAIGKARRMRASVGLGFTAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQTKLG
Ga0209814_103095821	3300027873	Populus Rhizosphere	NADRSTDTRTTEMKRSHQKRGSQSLSILLGAVPFAFALVRAVRTGYDLRYLWVALAALLGATIAMAMRKADRTRTALGLGLTAFVLATLLATAVALLLGTQFGPGVLLVGSGYGACLAASCVLYALAHPRNT
Ga0307497_104017812	3300031226	Soil	MRRSHQKLSQSLAMLFGAVPFAFALVRAVRTGDDFRYLWVALASLLGATIAVAIGKARRTRASVGLGFTAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQTRLG
Ga0310813_110287311	3300031716	Soil	MLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVAFASLLGATIAIAIGKLRRTRASVVLGVTAFVFATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYTLGGQTKLGGSGDSG
Ga0310900_117534231	3300031908	Soil	MLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVAFGALLGATIAIAMRKAERTRTFAGLGLTAFVLATLLATAVALFLGTQFGPGVLVVGSGFGGCLAASCVLYALAQS
Ga0310902_111853441	3300032012	Soil	SLAILFGAGPFAFALVRAVRTGDDFRYLWVALAALVGATIAMAIGKARRTRASVGLGFRAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYALGGQTKLGG
Ga0307470_106089601	3300032174	Hardwood Forest Soil	MKQSHQRLSQSLSILFGAVPFAFALVRAVRTGDDFRYLWIALASLLGATIAVAIGKVRRTRASVGLGFTAFVLATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASGVLYTLGGQSKLGGRGESG
Ga0310812_103751522	3300032421	Soil	MLSQSLAILFGAVPFAFALVRAVRTGDDFRYLWVAFASLLGATIAIAIGKVRRTRASVVLGVTAFVFATLFATAAALFLGTQFGPGVLVVGSGFGGCLAASSVLYTLGGQTKLGGSGDSG
Ga0364931_0242022_190_552	3300034176	Sediment	MKPSHQKRGFQSLSILFGAVPFAFALVRAVRTGHDLRYLWVALAALLGATIAMAMRKAHRTQTSLGLGLTAFVLATLLGTAVALFLGTQFGPGVLLVGSGCGGCLAASCVLYALAHPPDI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085887

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences