Metagenome Family F085881

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085881
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	56 residues
Representative Sequence	VTPAERELLSEEDEVAYAPESGQPFGGRANPWDDDDEPAGAHAYPADHHAPPGDDL
Number of Associated Samples	90
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.55 %
% of genes near scaffold ends (potentially truncated)	30.63 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.856 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (9.910 % of family members)
Environment Ontology (ENVO)	Unclassified (36.937 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.865 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.10% β-sheet: 0.00% Coil/Unstructured: 86.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00884	Sulfatase	23.42
PF00294	PfkB	5.41
PF00149	Metallophos	2.70
PF02836	Glyco_hydro_2_C	2.70
PF02837	Glyco_hydro_2_N	2.70
PF01436	NHL	1.80
PF13090	PP_kinase_C	0.90
PF01564	Spermine_synth	0.90
PF10092	DUF2330	0.90
PF00749	tRNA-synt_1c	0.90
PF00069	Pkinase	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	5.41
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.60
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
All Organisms	root	All Organisms	44.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
cellular organisms	root	All Organisms → cellular organisms	44.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.11 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	20.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8.11 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.90 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	20.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.21 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11.71 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	7.21 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.80 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	7.21 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	3.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.80 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.90 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	7.21 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	3.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.80 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.90 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
Arthrobacter dokdonellae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	7.21 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	3.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.80 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.90 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
Arthrobacter dokdonellae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	7.21 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	3.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.80 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	0.90 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.86 %
Arthrobacter dokdonellae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	7.21 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	3.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.80 %
Haliangium ochraceum DSM 14365	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum → Haliangium ochraceum DSM 14365	0.90 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_12495573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	722	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105242372	Not Available	713	Open in IMG/M
3300003324\|soilH2_10031382	Not Available	1458	Open in IMG/M
3300004156\|Ga0062589_100880544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	822	Open in IMG/M
3300004157\|Ga0062590_102234956	Not Available	573	Open in IMG/M
3300004633\|Ga0066395_10002882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5938	Open in IMG/M
3300005093\|Ga0062594_100500082	Not Available	1028	Open in IMG/M
3300005093\|Ga0062594_101580042	Not Available	678	Open in IMG/M
3300005328\|Ga0070676_10395641	All Organisms → cellular organisms → Bacteria → Proteobacteria	960	Open in IMG/M
3300005329\|Ga0070683_100210123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1849	Open in IMG/M
3300005329\|Ga0070683_100621724	Not Available	1034	Open in IMG/M
3300005329\|Ga0070683_102171026	Not Available	533	Open in IMG/M
3300005330\|Ga0070690_100009600	All Organisms → cellular organisms → Bacteria	5610	Open in IMG/M
3300005331\|Ga0070670_100235519	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum → Haliangium ochraceum DSM 14365	1594	Open in IMG/M
3300005340\|Ga0070689_100033503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	3914	Open in IMG/M
3300005340\|Ga0070689_100276177	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1393	Open in IMG/M
3300005340\|Ga0070689_100408422	Not Available	1149	Open in IMG/M
3300005341\|Ga0070691_10248796	Not Available	952	Open in IMG/M
3300005353\|Ga0070669_100070018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	2592	Open in IMG/M
3300005355\|Ga0070671_101175543	Not Available	675	Open in IMG/M
3300005364\|Ga0070673_100234717	Not Available	1592	Open in IMG/M
3300005365\|Ga0070688_101038852	Not Available	653	Open in IMG/M
3300005365\|Ga0070688_101197060	Not Available	610	Open in IMG/M
3300005367\|Ga0070667_101265533	Not Available	691	Open in IMG/M
3300005441\|Ga0070700_100417717	Not Available	1013	Open in IMG/M
3300005458\|Ga0070681_10117346	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2598	Open in IMG/M
3300005547\|Ga0070693_101525886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300005548\|Ga0070665_101043659	Not Available	829	Open in IMG/M
3300005615\|Ga0070702_100866537	Not Available	704	Open in IMG/M
3300005718\|Ga0068866_10127812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1441	Open in IMG/M
3300005719\|Ga0068861_100228530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	1577	Open in IMG/M
3300005764\|Ga0066903_100021097	All Organisms → cellular organisms → Bacteria	6946	Open in IMG/M
3300005764\|Ga0066903_103907031	Not Available	800	Open in IMG/M
3300005836\|Ga0074470_10389161	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1737	Open in IMG/M
3300005841\|Ga0068863_101650025	Not Available	650	Open in IMG/M
3300005843\|Ga0068860_100499859	Not Available	1214	Open in IMG/M
3300005844\|Ga0068862_102120712	Not Available	573	Open in IMG/M
3300006196\|Ga0075422_10036291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1739	Open in IMG/M
3300006237\|Ga0097621_100293647	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300006237\|Ga0097621_100602983	Not Available	1004	Open in IMG/M
3300009094\|Ga0111539_12955349	Not Available	550	Open in IMG/M
3300009148\|Ga0105243_10050308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	3292	Open in IMG/M
3300009156\|Ga0111538_10005365	All Organisms → cellular organisms → Bacteria	17529	Open in IMG/M
3300009156\|Ga0111538_11721587	Not Available	790	Open in IMG/M
3300009177\|Ga0105248_12567034	Not Available	581	Open in IMG/M
3300009609\|Ga0105347_1102177	Not Available	1082	Open in IMG/M
3300009792\|Ga0126374_11671680	Not Available	528	Open in IMG/M
3300010398\|Ga0126383_10072757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	2963	Open in IMG/M
3300010400\|Ga0134122_11868375	Not Available	635	Open in IMG/M
3300010401\|Ga0134121_10325166	Not Available	1369	Open in IMG/M
3300010403\|Ga0134123_10163948	Not Available	1854	Open in IMG/M
3300011430\|Ga0137423_1120484	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300011445\|Ga0137427_10032357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2054	Open in IMG/M
3300012231\|Ga0137465_1088220	Not Available	928	Open in IMG/M
3300012232\|Ga0137435_1227056	Not Available	569	Open in IMG/M
3300012354\|Ga0137366_10024406	All Organisms → cellular organisms → Bacteria	4704	Open in IMG/M
3300012469\|Ga0150984_116082259	Not Available	528	Open in IMG/M
3300012948\|Ga0126375_11330106	Not Available	605	Open in IMG/M
3300012951\|Ga0164300_11151559	Not Available	511	Open in IMG/M
3300014325\|Ga0163163_11808567	Not Available	671	Open in IMG/M
3300014325\|Ga0163163_12348332	Not Available	592	Open in IMG/M
3300015371\|Ga0132258_10475076	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3121	Open in IMG/M
3300015371\|Ga0132258_10605769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2750	Open in IMG/M
3300015371\|Ga0132258_10844839	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300015371\|Ga0132258_12048240	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1439	Open in IMG/M
3300015371\|Ga0132258_12410463	Not Available	1318	Open in IMG/M
3300015373\|Ga0132257_101184606	Not Available	967	Open in IMG/M
3300015374\|Ga0132255_100953911	Not Available	1285	Open in IMG/M
3300015374\|Ga0132255_102283020	Not Available	825	Open in IMG/M
3300015374\|Ga0132255_102996389	Not Available	721	Open in IMG/M
3300015374\|Ga0132255_104207043	Not Available	610	Open in IMG/M
3300018073\|Ga0184624_10051626	Not Available	1666	Open in IMG/M
3300018476\|Ga0190274_10760363	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300018481\|Ga0190271_10013286	All Organisms → cellular organisms → Bacteria → Proteobacteria	6003	Open in IMG/M
3300019362\|Ga0173479_10213993	Not Available	823	Open in IMG/M
3300021082\|Ga0210380_10050135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1802	Open in IMG/M
3300021082\|Ga0210380_10486460	Not Available	566	Open in IMG/M
3300021384\|Ga0213876_10444415	Not Available	690	Open in IMG/M
3300022756\|Ga0222622_10343694	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300024055\|Ga0247794_10006992	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2506	Open in IMG/M
3300024187\|Ga0247672_1007397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1752	Open in IMG/M
3300025901\|Ga0207688_10083913	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1823	Open in IMG/M
3300025907\|Ga0207645_10009116	All Organisms → cellular organisms → Bacteria	6883	Open in IMG/M
3300025907\|Ga0207645_10291525	Not Available	1085	Open in IMG/M
3300025908\|Ga0207643_10532525	Not Available	753	Open in IMG/M
3300025912\|Ga0207707_10351721	Not Available	1269	Open in IMG/M
3300025918\|Ga0207662_10001859	All Organisms → cellular organisms → Bacteria → Proteobacteria	10378	Open in IMG/M
3300025918\|Ga0207662_10011132	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4977	Open in IMG/M
3300025923\|Ga0207681_10884891	Not Available	747	Open in IMG/M
3300025925\|Ga0207650_10080306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	2472	Open in IMG/M
3300025926\|Ga0207659_10652273	Not Available	899	Open in IMG/M
3300025930\|Ga0207701_10006477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11678	Open in IMG/M
3300025930\|Ga0207701_10046388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4016	Open in IMG/M
3300025931\|Ga0207644_10766702	Not Available	806	Open in IMG/M
3300025936\|Ga0207670_10548835	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300025937\|Ga0207669_10003493	All Organisms → cellular organisms → Bacteria	6798	Open in IMG/M
3300025944\|Ga0207661_10132871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	2134	Open in IMG/M
3300025960\|Ga0207651_10179042	Not Available	1680	Open in IMG/M
3300026095\|Ga0207676_12046767	Not Available	571	Open in IMG/M
3300026121\|Ga0207683_10028399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	4837	Open in IMG/M
3300027513\|Ga0208685_1055809	Not Available	854	Open in IMG/M
3300027874\|Ga0209465_10002204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	8502	Open in IMG/M
3300027907\|Ga0207428_10086104	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2446	Open in IMG/M
3300028379\|Ga0268266_11885888	Not Available	572	Open in IMG/M
3300031547\|Ga0310887_10154954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	1205	Open in IMG/M
3300031548\|Ga0307408_101778094	Not Available	589	Open in IMG/M
3300031716\|Ga0310813_11153868	Not Available	712	Open in IMG/M
3300032000\|Ga0310903_10045948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter dokdonellae	1653	Open in IMG/M
3300032013\|Ga0310906_10422892	Not Available	885	Open in IMG/M
3300032122\|Ga0310895_10771950	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.95%
Host-Associated	Host-Associated	45.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	45.05%
Plants	Host-Associated → Plants	45.05%
Aquatic	Environmental → Aquatic	9.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.12%
Sediment	Environmental → Aquatic → Sediment	8.11%
Roots	Host-Associated → Plants → Roots	4.50%
Freshwater	Environmental → Aquatic → Freshwater	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.32%
Loam	Environmental → Terrestrial → Soil → Loam	20.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.21%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	9.01%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	8.11%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.41%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.70%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.80%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_124955732	3300000363	Soil	MTDEDEVACAPESGQIPGGRDNPWDDDDVEPPGVHAWPANHHAAPKDEL*
INPhiseqgaiiFebDRAFT_1052423722	3300000364	Soil	VSRAEYEALSDEDQVACAPESGQPMGGRDNPWDDDEEEADGAPHAFPTDHRAEPGDDL*
soilH2_100313822	3300003324	Sugarcane Root And Bulk Soil	VSPDEKELLSDEDEVACAPESGQPFGGRDNPWDDDEEPPSATHAFPTEHHAPPQDDL*
Ga0062589_1008805441	3300004156	Soil	VTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDDEPAGPHAWPADHRCAPGDDL*
Ga0062590_1022349562	3300004157	Soil	VSRAEYDALSDEEQVACAPESGQPMGGRDNPWDDDEEEVDGTPHAFPTDHRAEPGDDL*
Ga0066395_100028821	3300004633	Tropical Forest Soil	VSPNEKELLSDEDEVCYAPESGQPPGGRDNPWDDDDETAGAHAFPADHHEPPGDDL*
Ga0062594_1005000822	3300005093	Soil	VTPAERELLSEEDEVAYAPESGQPFGGRDNPWDDDDEPAGAHAFPAEHPGPPGDDL*
Ga0062594_1015800422	3300005093	Soil	VTPKEREALTDEDEMASAPESGQTPGGRANPWDDDDEDPPGLHAWPADHHAAPKDEF*
Ga0070676_103956412	3300005328	Miscanthus Rhizosphere	VTPQEREALTDEDEMASAPESGQTPGGRANPWDDDDEDPPGVHAWPADHHAAPKDEL*
Ga0070683_1002101232	3300005329	Corn Rhizosphere	VSTDETEVIGEDDDVAYAPESGQPSGGRDNPWDDDDEAGAAGPGHAFPTDHREAPGDDL*
Ga0070683_1006217242	3300005329	Corn Rhizosphere	MTPEEKSAVTDEDEAAYAPESGQPLGGRDNPWDDDDEKPGEARHAYPAEHHAPPKDEL*
Ga0070683_1021710262	3300005329	Corn Rhizosphere	VSPSEHEILTDEEECAYAPESGQPLAGRDNPWDDDETPVGPRHAFPADHHEPPGDDL*
Ga0070690_1000096007	3300005330	Switchgrass Rhizosphere	VSRAEYDALSDEEQVACAPESGQPMGGRDNPWDDDEQEAEGTPHAFPTDHRADPGDDL*
Ga0070670_1002355192	3300005331	Switchgrass Rhizosphere	VGPTEQQDLTDEDEMASAPESGQVLGGRDNPWDDDTADVAHPWPPEHHAAPKDEL*
Ga0070689_1000335031	3300005340	Switchgrass Rhizosphere	SEEDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL*
Ga0070689_1002761772	3300005340	Switchgrass Rhizosphere	VTPKEREALTDEDEMASAPESGQTPGGRANPWDDDDEDPPGVHAWPADHHAAPKDEL*
Ga0070689_1004084222	3300005340	Switchgrass Rhizosphere	MTPTQQKMTEEDEMASAPESGQVPGGRDNPWDDDDEAPCDSHLFPTKPREPPGNDL*
Ga0070691_102487961	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	ARAAGGTHVLRVTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDEPAGAHAYPADHHAPPGDDL*
Ga0070669_1000700183	3300005353	Switchgrass Rhizosphere	VTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL*
Ga0070671_1011755432	3300005355	Switchgrass Rhizosphere	VIPDDTEKLVDDDEAYAPESGQPRGGRDNPWDDDDERVAAHAFPAEHHAPPKDE
Ga0070673_1002347173	3300005364	Switchgrass Rhizosphere	YDALSDEEQVACAPESGQPMGGRDNPWDDDEQEAEGTPHAFPTDHRADPGDDL*
Ga0070688_1010388521	3300005365	Switchgrass Rhizosphere	VSRAEYDALSDEEQVACAPESGQPMGGRDNPWDDDEQEAEGTPHAFPTDHR
Ga0070688_1011970602	3300005365	Switchgrass Rhizosphere	ARTHTRRVSPDEREILTDEDEVACAPESGQPAGGRPNPWDDDDEEPVGVRHAYPADHHQPPGDDL*
Ga0070667_1012655332	3300005367	Switchgrass Rhizosphere	MTPEEKAAITDEDEAAYAPESGQPLGGRDNPWDDDDEHPGEARHAYPAEHHESPKDEL*
Ga0070700_1004177171	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VAYAPESGQPFGGRDNPWDDDDEPAGAHAFPAEHPGPPGDD
Ga0070681_101173462	3300005458	Corn Rhizosphere	VSTDETEVIGEDDDVAYAPESGQPPGGRDNPWDDDDEAGAAGPGHAFPTDHHEAPGDDL*
Ga0070693_1015258862	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VGTDEYQKLDQDEMACAPESGQPPGGRDNPWDDDEAEAEGVKHAFPTDHHAPPGD
Ga0070665_1010436592	3300005548	Switchgrass Rhizosphere	MTPIQQNMTEEDEMASAPESGQVPGGRDNPWDDDDEAPCDSHLFPTKPREPPGNDL*
Ga0070702_1008665372	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VSPDEREILTDEDEVACAPESGQPAGGRPNPWDDDDEEPVGVRHAYPADHHQPPGDDL*
Ga0068866_101278121	3300005718	Miscanthus Rhizosphere	VTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDEPAGAHAYPADHHAPPGDDL*
Ga0068861_1002285303	3300005719	Switchgrass Rhizosphere	EDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL*
Ga0066903_1000210974	3300005764	Tropical Forest Soil	VSPNEKELLSDEDEVCYAPESGQPPGGRDNPWDDDDETAGAHTFPADHHEPPGDDL*
Ga0066903_1039070312	3300005764	Tropical Forest Soil	VSPDEKELLIDEDEACYAPESGQPRGGRDNPWDDDDEPAGAHAFPADHHESPGDDL*
Ga0074470_103891612	3300005836	Sediment (Intertidal)	MANPIDVRDDEDEVCYAPESGQPIGGRDNPWDHEADEAAGTHHAFPAEHHEPPGDDL*
Ga0068863_1016500251	3300005841	Switchgrass Rhizosphere	VAYAPESGQPFGGRDNPWDDDDEPAGAHAFPAEHPGPPGDDL*
Ga0068860_1004998593	3300005843	Switchgrass Rhizosphere	VTPAERELLSEEDEITYAPESGQPFGNRDNPWDDDDEPAGAHAFPAEHPGPPGDDL*
Ga0068862_1021207122	3300005844	Switchgrass Rhizosphere	GIDLRAHVGMMANQPDVRDDEDEVSYAPESGQPIGGRDNPWDDDEDEALGAHHAFPADHHEPPGDDL*
Ga0075422_100362912	3300006196	Populus Rhizosphere	VPVAVGALRTHVERVTPKEQEALTEEDEVACAPESGQIPGGRDNPWDDDDEDPPGVHAWPADHHAAPKDEL*
Ga0097621_1002936472	3300006237	Miscanthus Rhizosphere	VTDEDEASYAPESGQPVGGRDNPWDDDDGPIGVRHAFPADHHGAPGDDL*
Ga0097621_1006029832	3300006237	Miscanthus Rhizosphere	VTPAERELLSEEDEVAYAPESGQPFGGRDNPWDDDDEPAGAHAFPAERPGPPGDDL*
Ga0075425_1028564741	3300006854	Populus Rhizosphere	MKMDDEEADELASAPESGQPRGGRENPWDDDDNGAPHPWPSDHHAAPKDEL*
Ga0111539_129553491	3300009094	Populus Rhizosphere	VTPKEREALTDEDEMASAPESGQTPGGRANPWDDDDEDPPGLHAWPADHNAAPKDEF*
Ga0105243_100503083	3300009148	Miscanthus Rhizosphere	AAPVARAAGGTHVLRVTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL*
Ga0111538_100053656	3300009156	Populus Rhizosphere	VGALRTHVERVTPKEQEALTEEDEVACAPESGQIPGGRDNPWDDDDEDPPGVHAWPADHHAAPKDEL*
Ga0111538_117215872	3300009156	Populus Rhizosphere	VTPKEREALTDEDEMASAPESGQTPGGRANPWDDDDVDPPGVHAWPADHHAAPKDEL*
Ga0105248_125670342	3300009177	Switchgrass Rhizosphere	VTPAERELLSEEDEVAYAPESGQPFGGRANPWDDDDEPAGAHAYPADHHAPPGDDL*
Ga0105347_11021771	3300009609	Soil	VTPKEREALTDEDEVACAPESGQIPGGRDNPWDDDDEGDPPGVHAWPADHHTAPKDEL*
Ga0126374_116716801	3300009792	Tropical Forest Soil	HFLRVSPHETEILSEEDELATAPESGQPYGGRDNAWDDDEPDDAGARHAFPADHHEPPGNDL*
Ga0126383_100727573	3300010398	Tropical Forest Soil	HRVSPNEKELLSDEDEVCYAPESGQPPGGRDNPWDDDDETAGAHAFPADHHEPPGDDL*
Ga0134122_118683752	3300010400	Terrestrial Soil	VTPKEREALTDEDEMASAPESGQIPGGRANPWDDDDEDPPGIHAWPADHHAAPKDEL*
Ga0134121_103251663	3300010401	Terrestrial Soil	MPSDEDELSYAPESGQPPGGRDNPWDDDDEPAGAHAFPADHHAPPGDDL*
Ga0134123_101639481	3300010403	Terrestrial Soil	APESGQPFGGRANPWDDDDEPAGAHAYPADHHAPPGDDL*
Ga0137423_11204842	3300011430	Soil	RTHVQSVPPKEREALTDEDEIACAPESGQIPGARANPWDDDDEGDPPGVHAWPANHHAAPKDEL*
Ga0137427_100323572	3300011445	Soil	VPPKEREALTDEDEVASAPESGQIPGGRDNPWDDDDKDPPGVHAWPADH
Ga0137465_10882203	3300012231	Soil	RSPSGLAGCGAAPRTHVPRVTPKERETLTDEDEMASAPESGQTPGGRANPWDDDDEDPPGVHAWPADHHAAPKDEL*
Ga0137435_12270562	3300012232	Soil	LTEEDEVACAPESGQPMGGRDNPWDDDEEEADGTPHAFPTDHRAPPGEDL*
Ga0137366_100244062	3300012354	Vadose Zone Soil	VIPEDTETLVDVDDDEAAYAPESGQPRGGRDNPWDDDDERVAAHAFPA*
Ga0150984_1160822592	3300012469	Avena Fatua Rhizosphere	VSSEDFDALTDEDQMAVAPESGQPPGGRDDPWDDGTPDAAHPWPPDHHAAPKDEL*
Ga0126375_113301062	3300012948	Tropical Forest Soil	PDETESLTDEDETAYAPESGQPRGGRDNPWDDDDEPAGAHAFPAGHGEPPGDDL*
Ga0164300_111515591	3300012951	Soil	MTPEEKSAVTDEDEAAYAPESGQPLGGRDNPWDDDDEHPGEARHAYPAEHHESPKDEL*
Ga0163163_118085671	3300014325	Switchgrass Rhizosphere	VSPDEREILTDEDEVACAPESGQPAGGRPNPWDDDDEEPEGVRHAYPADHHQPPGDDL*
Ga0163163_123483322	3300014325	Switchgrass Rhizosphere	MTDEDEMASAPESGQVPGGRANPWDDDDESPSIAHPFPTDH
Ga0132258_104750764	3300015371	Arabidopsis Rhizosphere	VSRAEYDALSDEEQVACAPESGQPMGGRANPWDDDEEEVDGTPHAFPTDHGADPGDDL*
Ga0132258_106057692	3300015371	Arabidopsis Rhizosphere	MTPEEKSAVTDEDEAAYAPESGQPLGGRDNPWDDDDEEPGEVRHAYPAEHHAPPKDEL*
Ga0132258_108448393	3300015371	Arabidopsis Rhizosphere	MNANEHQITDEDEMASAPESGQVPGGRANPWDDDDELPSTAHPFPTDHQGPPGDDL*
Ga0132258_120482402	3300015371	Arabidopsis Rhizosphere	MTDEDEMASAPESGQVPGGRANPWDDDDESPSIAHPFPTDHHAPAGDDL*
Ga0132258_124104632	3300015371	Arabidopsis Rhizosphere	VSRAEYDALSEEEELACAPESGQPMGGRVNPWDDDEEESDGTPHAFPTDHHCPPGDDL*
Ga0132257_1011846061	3300015373	Arabidopsis Rhizosphere	IHVRSVSRAEYDAMSEEEQVACAPESGQPMGGRDNPWDDDEEEVDGTPHAFPTDHGADPGDDL*
Ga0132255_1009539111	3300015374	Arabidopsis Rhizosphere	EDEASYAPESGQPVGGRDNPWDDDDGPTGVRHAFPADHHGTPGDDL*
Ga0132255_1022830202	3300015374	Arabidopsis Rhizosphere	VSRAEYDALSDEEQVACAPESGQPMGGRANPWDDDEEEVDGTPHAFPTDHRADPGDDL*
Ga0132255_1029963891	3300015374	Arabidopsis Rhizosphere	TETTTDEDEMASAPESGQPPGGRENPWDDDDEPAGPSHAYPAEHHAAPKDEL*
Ga0132255_1042070432	3300015374	Arabidopsis Rhizosphere	VSPSEHEILTDEEECAYAPESGQPLAGRDNPWDDDDVPAGPRHAFPADHHEPPGDDL*
Ga0184624_100516262	3300018073	Groundwater Sediment	VIPENTETIVDDDEAAYAPESGQPRGGRENPWDDDDEKSAGAHAFPAEHHESPKDEF
Ga0190274_107603631	3300018476	Soil	MTDEDEMASAPESGQVPGGRANPWDDDDESPSIAHPFPADHHAPPGDDL
Ga0190271_100132864	3300018481	Soil	VTPKEREALTDEDEMASAPESGQPPGGRPNPWDDDDVDPPGVHAWPADHHAAPKDEL
Ga0173479_102139931	3300019362	Soil	VLRVTPAERELLSEEDEVAYAPESGQPFGGRDNPWDDDDEPAGAHAFPAEHPGPPGDDL
Ga0210380_100501352	3300021082	Groundwater Sediment	VSTKEKEVLTDEDEMAAAPESGQIPGGREDPWEDARPDAAHPWPPEHHAAPKDEL
Ga0210380_104864602	3300021082	Groundwater Sediment	EALTDEDEMASAPESGQTPGGRANPWDDDDEDPPGVHAWPADHHAAPKDEL
Ga0213876_104444152	3300021384	Plant Roots	VSPDETTIVNDEDEVTSAPESGQPRGGRDNNPWDDDDEPPSAAHTFPAEHHAPPQDDL
Ga0222622_103436942	3300022756	Groundwater Sediment	MTDEDEMASAPESGQVPGGRPNPWDDDDESPSIAHPFPADHHAPPGDDL
Ga0247794_100069922	3300024055	Soil	MTPEEKSAVTDEDEAAYAPESGQPLGGRDNPWDDDDEKPGEARHAYPAEHHAP
Ga0247672_10073972	3300024187	Soil	VSPNEKTALSDEDEVACAPESGQPAGGRDNPWDDDDEEPAGVHAWPADHHAPPGDDL
Ga0207688_100839132	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDDEPAGPHAWPADHRCAPGDDL
Ga0207645_100091164	3300025907	Miscanthus Rhizosphere	VTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDEPAGAHAYPADHHAPPGDDL
Ga0207645_102915252	3300025907	Miscanthus Rhizosphere	VTPQEREALTDEDEMASAPESGQTPGGRANPWDDDDEDPPGVHAWPADHHAAPKDEL
Ga0207643_105325251	3300025908	Miscanthus Rhizosphere	VTPAERELLSEEDEVAYAPESGQPFGGRANPWDDDDEPAGAHAYPADHHAPPGDDL
Ga0207707_103517212	3300025912	Corn Rhizosphere	VSTDETEVIGEDDDVAYAPESGQPPGGRDNPWDDDDEAGAAGPGHAFPTDHHEAPGDDL
Ga0207662_100018599	3300025918	Switchgrass Rhizosphere	VSRAEYDALSDEEQVACAPESGQPMGGRDNPWDDDEQEAEGTPHAFPTDHRADPGDDL
Ga0207662_100111322	3300025918	Switchgrass Rhizosphere	VAYAPESGQPFGGRDNPWDDDDEPAGAHAFPAEHPGPPGDDL
Ga0207681_108848912	3300025923	Switchgrass Rhizosphere	VTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL
Ga0207650_100803062	3300025925	Switchgrass Rhizosphere	MASAPESGQVLGGRDNPWDDDTADVAHPWPPEHHAAPKDEL
Ga0207659_106522732	3300025926	Miscanthus Rhizosphere	VTPKEREALTDEDEMASAPESGQTPGGRANPWDDDDEDPPGVHAWPADHHAAPKDEL
Ga0207701_100064774	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MMANQPDVRDDEDEVSYAPESGQPIGGRDNPWDDDEDEALGAHHAFPADHHEPPGDDL
Ga0207701_100463883	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTPTQQKMTEEDEMASAPESGQVPGGRDNPWDDDDEAPCDSHLFPTKPREPPGNDL
Ga0207644_107667022	3300025931	Switchgrass Rhizosphere	VTPAERELLSEEDEVAYAPESGQPFGGRDNPWDDDDEPAGAHAFPAEHPGPPGDDL
Ga0207670_105488352	3300025936	Switchgrass Rhizosphere	VSPDEREILTDEDEVACAPESGQPAGGRPNPWDDDDEEPVGVRHAYPADHHQPPGDDL
Ga0207669_100034931	3300025937	Miscanthus Rhizosphere	AEIELLSEEDEVAYAPESGQPFGGRANPWDDDDEPAGAHAYPADHHAPPGDDL
Ga0207661_101328713	3300025944	Corn Rhizosphere	VSTDETEVIGEDDDVAYAPESGQPSGGRDNPWDDDDEAGAAGPGHAFPTDHREAPGDDL
Ga0207651_101790423	3300025960	Switchgrass Rhizosphere	VSPDEREILTDEDEVACAPESGQPMGGRDNPWDDDEQEAEGTPHAFPTDHRADPGDDL
Ga0207676_120467671	3300026095	Switchgrass Rhizosphere	MTPEEKAAITDEDEAAYAPESGQPLGGRDNPWDDDDEHPGEARHAYPAEHHESPKD
Ga0207683_100283994	3300026121	Miscanthus Rhizosphere	PESGQPFGGRDNPWDDDDEPAGAHAFPAEHPGPPGDDL
Ga0208685_10558091	3300027513	Soil	VTPKEREALTDEDEVACAPESGQIPGGRDNPWDDDDEGDPPGVHAWPADHHTAPKDEL
Ga0209465_100022043	3300027874	Tropical Forest Soil	VSPNEKELLSDEDEVCYAPESGQPPGGRDNPWDDDDETAGAHTFPADHHEPPGDDL
Ga0207428_100861042	3300027907	Populus Rhizosphere	VPVAVGALRTHVERVTPKEQEALTEEDEVACAPESGQIPGGRDNPWDDDDEDPPGVHAWPADHHAAPKDEL
Ga0268266_118858882	3300028379	Switchgrass Rhizosphere	GTHVLRVTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL
Ga0310887_101549543	3300031547	Soil	IELLSEEDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL
Ga0307408_1017780942	3300031548	Rhizosphere	MTDEDEMASAPESGQVPGGRANPWDDDDESPSDAHPFPTDHHAPPGDDL
Ga0310813_111538681	3300031716	Soil	MPSDEDELSYAPESGQPPGGRDNPWDDDDEPAGAHAFPAEHPGPPGDDL
Ga0310903_100459483	3300032000	Soil	APVAGAAAWTHVLRVTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL
Ga0310906_104228922	3300032013	Soil	EEDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL
Ga0310895_107719502	3300032122	Soil	RGAAPVARAAGGTHVLRVTPAEIELLSEEDEVAYAPESGQPFGGRANPWDDDDDEPAGTHAWPADHRCAPGDDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085881

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences