Metagenome Family F085862

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085862
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	59 residues
Representative Sequence	MSNLAEKSEKNPVTTETEEKKWELFESREARLRDQKHLEMAYEWLRNRGKTVLLQGGIES
Number of Associated Samples	65
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.79 %
% of genes near scaffold ends (potentially truncated)	18.02 %
% of genes from short scaffolds (< 2000 bps)	77.48 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.459 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (15.315 % of family members)
Environment Ontology (ENVO)	Unclassified (23.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01402	RHH_1	24.32
PF04366	Ysc84	5.41
PF13401	AAA_22	5.41
PF07589	PEP-CTERM	2.70
PF01966	HD	1.80
PF12146	Hydrolase_4	1.80
PF00753	Lactamase_B	1.80
PF13502	AsmA_2	0.90
PF01833	TIG	0.90
PF02371	Transposase_20	0.90
PF14236	DUF4338	0.90
PF13336	AcetylCoA_hyd_C	0.90
PF10576	EndIII_4Fe-2S	0.90
PF01738	DLH	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	5.41
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.46 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.35 %
Unclassified	root	N/A	40.54 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	47.75 %
Unclassified	root	N/A	40.54 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	2.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	47.75 %
Unclassified	root	N/A	40.54 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	27.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.54 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.52 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.70 %
Deltaproteobacteria bacterium RBG_16_48_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	1.80 %
Deltaproteobacteria bacterium RBG_16_49_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	1.80 %
Deltaproteobacteria bacterium ADurb.Bin135	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	0.90 %
Deltaproteobacteria bacterium CG03_land_8_20_14_0_80_45_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG03_land_8_20_14_0_80_45_14	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000311\|WSSedA1Ba3DRAFT_1101659	Not Available	551	Open in IMG/M
3300002465\|LO132_10047923	Not Available	1729	Open in IMG/M
3300002961\|JGI11641J44799_10075537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	953	Open in IMG/M
3300003859\|Ga0031653_10200713	Not Available	522	Open in IMG/M
3300003861\|Ga0031654_10054831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1119	Open in IMG/M
3300004481\|Ga0069718_12955239	Not Available	692	Open in IMG/M
3300006224\|Ga0079037_100332454	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300006224\|Ga0079037_100435102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1248	Open in IMG/M
3300006224\|Ga0079037_101763459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300006930\|Ga0079303_10052193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1449	Open in IMG/M
3300009053\|Ga0105095_10019695	Not Available	3627	Open in IMG/M
3300009053\|Ga0105095_10048998	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2272	Open in IMG/M
3300009053\|Ga0105095_10119528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1433	Open in IMG/M
3300009053\|Ga0105095_10433246	Not Available	727	Open in IMG/M
3300009078\|Ga0105106_10278635	Not Available	1213	Open in IMG/M
3300009078\|Ga0105106_10898299	Not Available	630	Open in IMG/M
3300009082\|Ga0105099_10085364	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1713	Open in IMG/M
3300009082\|Ga0105099_10571740	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300009087\|Ga0105107_10308504	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1102	Open in IMG/M
3300009091\|Ga0102851_10273601	Not Available	1634	Open in IMG/M
3300009091\|Ga0102851_12644806	Not Available	575	Open in IMG/M
3300009111\|Ga0115026_10005925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4963	Open in IMG/M
3300009153\|Ga0105094_10090008	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1725	Open in IMG/M
3300009171\|Ga0105101_10374992	Not Available	692	Open in IMG/M
3300009760\|Ga0116131_1043291	Not Available	1485	Open in IMG/M
3300012931\|Ga0153915_10167299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2394	Open in IMG/M
3300012931\|Ga0153915_10372330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	1611	Open in IMG/M
3300012931\|Ga0153915_10531097	Not Available	1347	Open in IMG/M
3300012931\|Ga0153915_11044338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	952	Open in IMG/M
3300012931\|Ga0153915_11460389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	799	Open in IMG/M
3300012931\|Ga0153915_11970684	Not Available	683	Open in IMG/M
3300012931\|Ga0153915_12132779	Not Available	656	Open in IMG/M
3300012931\|Ga0153915_12228289	Not Available	641	Open in IMG/M
3300012931\|Ga0153915_12951251	Not Available	554	Open in IMG/M
3300012964\|Ga0153916_10019014	All Organisms → cellular organisms → Bacteria	5762	Open in IMG/M
3300012964\|Ga0153916_10122832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2496	Open in IMG/M
3300012964\|Ga0153916_10349074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	1528	Open in IMG/M
3300012964\|Ga0153916_10919076	Not Available	956	Open in IMG/M
3300012964\|Ga0153916_11807658	Not Available	683	Open in IMG/M
3300012964\|Ga0153916_13293000	Not Available	508	Open in IMG/M
3300017929\|Ga0187849_1126048	Not Available	1056	Open in IMG/M
3300017939\|Ga0187775_10436601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300017939\|Ga0187775_10475422	Not Available	530	Open in IMG/M
3300017944\|Ga0187786_10321857	Not Available	643	Open in IMG/M
3300017961\|Ga0187778_10217552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1220	Open in IMG/M
3300017961\|Ga0187778_10588223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	745	Open in IMG/M
3300017966\|Ga0187776_10314563	Not Available	1022	Open in IMG/M
3300017966\|Ga0187776_11202880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300017966\|Ga0187776_11373539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300018032\|Ga0187788_10074765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1190	Open in IMG/M
3300018055\|Ga0184616_10065226	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1246	Open in IMG/M
3300018064\|Ga0187773_10030367	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2379	Open in IMG/M
3300018068\|Ga0184636_1021298	Not Available	1990	Open in IMG/M
3300018068\|Ga0184636_1048886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1382	Open in IMG/M
3300018070\|Ga0184631_10043740	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1615	Open in IMG/M
3300018089\|Ga0187774_10101003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1421	Open in IMG/M
3300018089\|Ga0187774_10591431	Not Available	716	Open in IMG/M
3300018089\|Ga0187774_10786589	Not Available	641	Open in IMG/M
3300018090\|Ga0187770_11594778	Not Available	532	Open in IMG/M
3300022208\|Ga0224495_10221694	Not Available	783	Open in IMG/M
3300025164\|Ga0209521_10468624	Not Available	668	Open in IMG/M
3300025174\|Ga0209324_10090017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2104	Open in IMG/M
3300026348\|Ga0256813_1006592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	883	Open in IMG/M
3300027713\|Ga0209286_1001825	All Organisms → cellular organisms → Bacteria	6772	Open in IMG/M
3300027713\|Ga0209286_1158541	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300027715\|Ga0208665_10069342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1055	Open in IMG/M
3300027723\|Ga0209703_1324333	Not Available	542	Open in IMG/M
3300027726\|Ga0209285_10051651	Not Available	1217	Open in IMG/M
3300027731\|Ga0209592_1025068	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2246	Open in IMG/M
3300027740\|Ga0214474_1110750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1033	Open in IMG/M
3300027792\|Ga0209287_10340647	Not Available	576	Open in IMG/M
3300027871\|Ga0209397_10651178	Not Available	528	Open in IMG/M
3300027877\|Ga0209293_10025602	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300027900\|Ga0209253_10113334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2216	Open in IMG/M
3300031707\|Ga0315291_10335942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	1464	Open in IMG/M
3300031885\|Ga0315285_10657851	Not Available	682	Open in IMG/M
3300031949\|Ga0214473_10285355	Not Available	1889	Open in IMG/M
3300032069\|Ga0315282_10027357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7458	Open in IMG/M
3300032069\|Ga0315282_10028669	All Organisms → cellular organisms → Bacteria	7173	Open in IMG/M
3300032070\|Ga0315279_10075574	All Organisms → cellular organisms → Bacteria	3015	Open in IMG/M
3300032783\|Ga0335079_10036922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5613	Open in IMG/M
3300032829\|Ga0335070_10002996	All Organisms → cellular organisms → Bacteria	19690	Open in IMG/M
3300033406\|Ga0316604_10040835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2384	Open in IMG/M
3300033406\|Ga0316604_10308857	Not Available	862	Open in IMG/M
3300033414\|Ga0316619_11839962	Not Available	549	Open in IMG/M
3300033433\|Ga0326726_10083212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2840	Open in IMG/M
3300033433\|Ga0326726_10117177	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	2401	Open in IMG/M
3300033433\|Ga0326726_10162203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2045	Open in IMG/M
3300033433\|Ga0326726_10194113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1871	Open in IMG/M
3300033433\|Ga0326726_10195864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1863	Open in IMG/M
3300033433\|Ga0326726_10221147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1754	Open in IMG/M
3300033433\|Ga0326726_10495228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1168	Open in IMG/M
3300033433\|Ga0326726_10712721	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	968	Open in IMG/M
3300033434\|Ga0316613_10631628	Not Available	732	Open in IMG/M
3300033480\|Ga0316620_10102024	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300033480\|Ga0316620_10157957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1831	Open in IMG/M
3300033480\|Ga0316620_10669286	Not Available	983	Open in IMG/M
3300033480\|Ga0316620_11778759	Not Available	611	Open in IMG/M
3300033480\|Ga0316620_12231519	Not Available	544	Open in IMG/M
3300033486\|Ga0316624_10001225	All Organisms → cellular organisms → Bacteria	9959	Open in IMG/M
3300033486\|Ga0316624_10145172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1760	Open in IMG/M
3300033486\|Ga0316624_10813525	Not Available	831	Open in IMG/M
3300033489\|Ga0299912_10849573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	693	Open in IMG/M
3300033513\|Ga0316628_100209665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2349	Open in IMG/M
3300033513\|Ga0316628_100943197	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_48_10	1143	Open in IMG/M
3300033521\|Ga0316616_103536534	Not Available	588	Open in IMG/M
3300033991\|Ga0334965_0049505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2006	Open in IMG/M
3300034078\|Ga0373900_065479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	674	Open in IMG/M
3300034090\|Ga0326723_0119442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG03_land_8_20_14_0_80_45_14	1147	Open in IMG/M
3300034090\|Ga0326723_0171376	Not Available	958	Open in IMG/M
3300034099\|Ga0373902_136115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.20%
Engineered	Engineered	1.80%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	54.95%
Terrestrial	Environmental → Terrestrial	43.24%
Bioremediation	Engineered → Bioremediation	1.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.65%
Soil	Environmental → Terrestrial → Soil	32.43%
Peat	Environmental → Terrestrial → Peat	9.01%
Sediment	Environmental → Aquatic → Sediment	3.60%
Marine	Environmental → Aquatic → Marine	2.70%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.80%
Metal	Engineered → Bioremediation → Metal	1.80%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	27.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	18.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.01%
Lake	Environmental → Aquatic → Freshwater → Lake	5.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.80%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.80%
Microbialites	Environmental → Aquatic → Freshwater → Microbialites	0.90%
Sediment	Environmental → Aquatic → Marine → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	27.93%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	18.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	18.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.01%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.70%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.70%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.80%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Microbialites → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	15.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	15.32%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	13.51%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	12.61%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	9.01%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.41%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	4.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.60%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.70%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.70%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.80%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Microbialites → Unclassified → Freshwater Lake	0.90%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000311	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300002465	Anoxic frehswater biofilm from Lago dell Orsa, Frasassi caves, Italy	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300026348	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 C6	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M
3300034078	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.1	Engineered	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034099	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedA1Ba3DRAFT_11016591	3300000311	Wetland	MSYLAEKPEKNPVTTEAKEKKWEIFESREASLRDQKHLEMAYEWLRNRGKTDPLKGAIES
LO132_100479231	3300002465	Freshwater Lake	MSNLAERYEKNPVTEETEEKGWELFENEEARLRDQKHLEMAYEWLRRRGKSVLLKGAIESP*
JGI11641J44799_100755372	3300002961	Wetland	MSYLAEKPEKNPVTTEAKEKKWEIFESREASLRDQKHLEMAYEWLRNRGKTDPLKGAIESL*
Ga0031653_102007131	3300003859	Freshwater Lake Sediment	MSHLAEKSEKKPVTTETEEKQWEIFENREANLRDQKHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0031654_100548312	3300003861	Freshwater Lake Sediment	MSNLAEKSEKNPVTTEAEEKKWELFENREARLRDQKHLEMACEWLRNRGKMVLLQGAIESL*
Ga0069718_129552393	3300004481	Sediment	MSNLAERYEKNPVTKETEEKGWELFENEEARLRDQKHLEMAYEWLRSRGKSVLLKGAIESP*
Ga0079037_1003324541	3300006224	Freshwater Wetlands	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKADLLKGTIESL*
Ga0079037_1004351024	3300006224	Freshwater Wetlands	MNHLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0079037_1017634592	3300006224	Freshwater Wetlands	MNHLLEKPEKNPVTTETEEKKWEIFENGEARLRDQKHLEMAYEWLRNRGKTDLLKGAIESF*
Ga0079303_100521933	3300006930	Deep Subsurface	MNHLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0105095_100196951	3300009053	Freshwater Sediment	MSHLAEKSEKNRVTTETEKKKWEIFENREASLRDQKHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0105095_100489982	3300009053	Freshwater Sediment	MSKLSEKFEENSLITEIEEKEWKLFENREAKLRDQRHLEMAYEWLRSRRKIVPLKDGIESL*
Ga0105095_101195283	3300009053	Freshwater Sediment	MNPLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0105095_104332461	3300009053	Freshwater Sediment	MNHLAEKCEKKTVTTEAEEKKWEIFENREAILRDQKHLEMAYEWLRNRGKTNLLKGSIERL*
Ga0105106_102786352	3300009078	Freshwater Sediment	MSHLAEKSEKNRVTTETEKKKWEIFENREASLRDQKHLEMAYEWLRNRGKKDLLKGAIESL*
Ga0105106_108982993	3300009078	Freshwater Sediment	MSKLSEKFEENSLIREIEEKEWKLFENREEKLRDQRHLEMAYEWLRSRRKIVPLKDGIE
Ga0105099_100853641	3300009082	Freshwater Sediment	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEW
Ga0105099_105717402	3300009082	Freshwater Sediment	GMNHLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKADLLKGAIESL*
Ga0105107_103085042	3300009087	Freshwater Sediment	MSHLAEKSKKNRVTTETEKKKWEIFENREASLRDQKHLEMAYEWLRNKGKTDLLKGAIESL*
Ga0102851_102736012	3300009091	Freshwater Wetlands	MNPLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0102851_126448062	3300009091	Freshwater Wetlands	MSHLAEKPEKNPVTKETEEKKWEIFENREARLRDQKHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0115026_100059253	3300009111	Wetland	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKADLLKGAIESL*
Ga0105094_100900083	3300009153	Freshwater Sediment	MSKLSEKFEENYLITEIEEKEWKLFENREAKLRDQKHLEMAYEWLRRRGKI*
Ga0105101_103749922	3300009171	Freshwater Sediment	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKTDLLKGAIESL*
Ga0116131_10432911	3300009760	Peatland	MGNPAEKYWENPVTTEIKGKKWELFENTEARLRNHEHLEKAYKWLRNRGKTVPLKGEIESL*
Ga0153915_101672994	3300012931	Freshwater Wetlands	MGNLAEKSEKNPFTPEAEEKKSELFENREARLRDQKHLEMAYEWLRNRGKIV
Ga0153915_103723303	3300012931	Freshwater Wetlands	MSNLAEKSEKNPLTKETEEKKWELFENREARLRDQKHLEMAYEWLRSKGKIALFKGAIESL*
Ga0153915_105310974	3300012931	Freshwater Wetlands	MGNPAEKFWENPITTEIKGKKWELFENMEARLRNQEHLQKAYEWLRNRGKIVPSECGIESL*
Ga0153915_110443382	3300012931	Freshwater Wetlands	LGNLAEKTGKNQVTAEMEEKKWELFESTEAKLRDMEHLEMAYEWLRNRQKPAQLKRAIEDL*
Ga0153915_114603892	3300012931	Freshwater Wetlands	MSNLIEKFEKNPVATEIEEKERKLFENKEAELRNQRHLELAYEWLRSRGKIVLLKDGIESF*
Ga0153915_119706841	3300012931	Freshwater Wetlands	MSNLAEKLEKRPVTTDREEKKWELFENREARLRDQMHLEMAYEWLRSRGKTDLLKGAIENL*
Ga0153915_121327792	3300012931	Freshwater Wetlands	VERKEVSGMSNLAEKSERNPVTTETEEKKWELFENWEARLKDQKHLEMACEWLRSRGKTDLLKGAIENV*
Ga0153915_122282891	3300012931	Freshwater Wetlands	MSNLAEKSEKKPVTTETEERKWELFENREARLRDQKHLEMAYEWLRNRGKMVVLQGAIESL*
Ga0153915_129512511	3300012931	Freshwater Wetlands	MGNPAEKFWANPVTTEIKEQKWEVFEHTEARLRNQEHLQKAYEWLRNRGKI
Ga0153916_100190148	3300012964	Freshwater Wetlands	SAKRKEVSRMGNPAEKFWENPITTEIKGKKWELFENMEARLRNQEHLQKAYEWLRNRGKIVPSECGIESL*
Ga0153916_101228322	3300012964	Freshwater Wetlands	MSNLAEKLEKRPVTTDREEKKWEFFENREARLRDQMHLEMAYEWLRSRGKTDLLKGAIENL*
Ga0153916_103490742	3300012964	Freshwater Wetlands	VERKEVSGMSNLAEKSERNPVTTETEEKKWELFESWEARLRDQKHLEMAYEWLRSRGKTDLLKAAIENV*
Ga0153916_109190761	3300012964	Freshwater Wetlands	MSNLAEKSEKNPFTTGAEEKKCELFENREARLRDQKHLEMAYEWLRNRGKIVLLKGAIESL*
Ga0153916_118076581	3300012964	Freshwater Wetlands	MSNLAGRYEKNPVPTETEEKEWELFENEEARLRDQKHLEMAYEWLRSRGKSVLLKGAIESP*
Ga0153916_132930001	3300012964	Freshwater Wetlands	MSNLAEKSGKNPFTAEAEEKKCELFENREARLRDQKHLEMAYEWLRNRGKIMLLKGAIESL*
Ga0187849_11260481	3300017929	Peatland	MGNPAEKYWENPVTTEIKGKKWELFENTEARLRNHEHLEKAYKW
Ga0187775_104366013	3300017939	Tropical Peatland	MSNVIERSEKIPITTEMEDKKRELFENMEARLRDQKHLEMAYEWLRNRGKMTLSKGAVEN
Ga0187775_104754221	3300017939	Tropical Peatland	MSNLAEETVKNPVTKETEEKKSEAFTSREARLRNQKHLEMAYEWLRNRGKRVESKGAVEN
Ga0187786_103218571	3300017944	Tropical Peatland	MSNVIERSEKIPITTEMEDKKRELFENMEARLRDQKHLEMAYEWLRNR
Ga0187778_102175524	3300017961	Tropical Peatland	MSNLAERHKKNPVAREIEEMRWEAFESKEARLRDQKHLEMAYEWLRNRGKKVLLRGAIEN
Ga0187778_105882232	3300017961	Tropical Peatland	MSNPAEKFREVPVTREIKAKRWEFFENREARSRNQRHLEKAYEWLSRGKIVPLKGGTESPKLNQPT
Ga0187776_103145634	3300017966	Tropical Peatland	MSNLAERQKKNPVARKTEEMRWEAFEGKEARLRDQKHLEMAYEWLRNRGKMVLLRGAIEN
Ga0187776_112028801	3300017966	Tropical Peatland	MGNPAEKFLEKPVTTELKGKKWELFENTEARLRNQEHLEKAYDWLKSRGKIVPLKGGTES
Ga0187776_113735392	3300017966	Tropical Peatland	MSNLAEKSDKNPVTTETEKKKWELFENKEARLRDQKHLEMAYEWLRNRGKMVLLQGGIKR
Ga0187788_100747653	3300018032	Tropical Peatland	MSNLAEKSEKNPVTTETEEKKWEPFENREARLRDQKHLEMAYEWLRNRGKIVLLQGGIKS
Ga0184616_100652263	3300018055	Groundwater Sediment	MSNLAEKSEKNPVTTEAEEKKWELFENREARLRDQKHLEMACEWLRNRGKMVLLQGAIES
Ga0187773_100303673	3300018064	Tropical Peatland	MSNLAEKPKKNPVTAETGKKKWELFEDREARLRNQRHLEMAYEWLKNRGKIAPFQGSLEN
Ga0184636_10212984	3300018068	Groundwater Sediment	MSNLAEKSKKNPVTTEAEEKKWELFENREARLRDQKHLEMAYEWLRNRGKMALLQGAIES
Ga0184636_10488861	3300018068	Groundwater Sediment	MSNLAEKSEKNPVTTEAEEKKWELFENREARLRDQKHLEMACEWLRNRGK
Ga0184631_100437403	3300018070	Groundwater Sediment	MSNLAEKSEKNPVTTEAEEKKWELFENREARLRDQKHLEMACEWLRNRGKMALLQGAIES
Ga0187774_101010032	3300018089	Tropical Peatland	MSNLAEKPEKNPVPTEMEEKKWELFESREARLRDQKHLEMAYEWLRNRGKMVLLKRAIEN
Ga0187774_105914312	3300018089	Tropical Peatland	MSNVIERSEKIPITTEMEDKKRELFENMEARLRDQKHLEMAYEWLRNRGKMTLLKGAVEN
Ga0187774_107865891	3300018089	Tropical Peatland	MSNLTEKPEKNPVTTEMEKKKRDLFEDREARLRDQKHLEMAYEWLRNRGKTALFQGSVEN
Ga0187770_115947783	3300018090	Tropical Peatland	MSNLAERHKKNPVAREIEEMRWEAFESKEARLRDQKHLEMAYEWLRNRGKKVLLRGAI
Ga0224495_102216942	3300022208	Sediment	MSNLLEKFEKNSLITEIGEKEWELFENREAKLRNQKHLEMAYEWLRRRGKIELLKGRIES
Ga0209521_104686241	3300025164	Soil	VERKEVSGMSNLAEKSERNPVTIETEEKKWELFESWEARLRDQKHLEMAYEWLRSRGKTDLLKGASENS
Ga0209324_100900173	3300025174	Soil	MSNLAEKSERNPVTTETEEKKWELFESWEARLRDQKHLEMAYEWLRSRGKTDLLKGASEN
Ga0256813_10065922	3300026348	Sediment	MSHLAEKSERNPATTEPEEKQWEIFDNREASLRNQKHLEMAYEWLRNKGKTDLLKGASES
Ga0209286_10018251	3300027713	Freshwater Sediment	MNPLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIES
Ga0209286_11585412	3300027713	Freshwater Sediment	MSKLSEKFEENSLIREIEEKEWKLFENREEKLRDQRHLEMAYEWLRSRRKIVPLKDGI
Ga0208665_100693422	3300027715	Deep Subsurface	MNHLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIES
Ga0209703_13243332	3300027723	Freshwater Sediment	MSKLSEKFEENSLITEIEEKEWKLFENREAKLRDQRHLEMAYEWLRSRRKIVPLKD
Ga0209285_100516511	3300027726	Freshwater Sediment	MNHLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIES
Ga0209592_10250684	3300027731	Freshwater Sediment	MSKLSEKFEENSLITEIEEKEWKLFENREAKLRDQRHLEMAYEWLRSRRKIVPLKDGIES
Ga0214474_11107502	3300027740	Soil	MGNLAEKSGENPVTTETEEKKWELFENREARLRDQKHLEMAYEWLRNRGKIVLLKGAVEN
Ga0209287_103406472	3300027792	Freshwater Sediment	MSKLSEKFEENSLITEIEEKEWKLFENREAKLRDQRHLEMAYEWLRNRGKTDLLKGAIES
Ga0209397_106511782	3300027871	Wetland	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKADLLKGTIES
Ga0209293_100256024	3300027877	Wetland	MSHLVEKPEKTPVTPETEERKWEIFENREARLRDQKHLEMAYEWLRNRGKADLLKGAIES
Ga0209253_101133343	3300027900	Freshwater Lake Sediment	MSHLAEKSEKKPVTTETEEKQWEIFENREANLRDQKHLEMAYEWLRNRGKTDLLKGAIES
Ga0315291_103359423	3300031707	Sediment	MSNLSEKFEKNSVITEIEEKEWKLFENRGAKLRDQKHLEMAYEWLRRRGKI
Ga0315285_106578511	3300031885	Sediment	MSNLSEKFEKNSVITEIEEKEWKLFENRGAKLRDQKHLEMAYEWLRRRGCRRYPKLT
Ga0214473_102853554	3300031949	Soil	MSNLAEKSEKNPVTTEAEEKKWELFGNREARLRDQKHLEMAHEWLRNRGKMVLLKGAIES
Ga0315282_100273579	3300032069	Sediment	MGNPAEKFWKNPVTTEIKGKKWELFENTEARLRNQEHLEKAYEWLRNRGKIVPLECGIES
Ga0315282_100286694	3300032069	Sediment	VSNLIEKFEKNPVATEIEEKEWKLFENREAKLRDQRHLELAYEWLRSRRKIVLLKDGIES
Ga0315279_100755744	3300032070	Sediment	MSNLIEKFEKNPVATEIEEKEWKLFENREAKLRDQRHLELAYEWLRSRRKIVLLKDGIES
Ga0335079_100369224	3300032783	Soil	MSDLAEKSDKNAVTQGADGKKWHLIKNREARLRDLKHFELAYEWLKSRGKIVIEN
Ga0335070_100029964	3300032829	Soil	VNNLIGKFEKNPVATEIEEKEWKLFDNREAKLRDQTHLELAYEWLKSRRKIVLLKD
Ga0316604_100408354	3300033406	Soil	EVSGMNHLAEKLEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRGKTDLLKGAIESL
Ga0316604_103088571	3300033406	Soil	MNHLAEKPEKNPVTIETEEKKWEIFENREARLRDQRHLEMAYEWLRNRG
Ga0316619_118399621	3300033414	Soil	MSYLAEKPEKNPVTTETKEKKWEIFESREASLRDQKHLEMAYEWLRNRRKTDPLKGAIES
Ga0326726_100832126	3300033433	Peat Soil	MSNLAEKSEKNPVTTETEEKKWELFESREARLRDQKHLEMAYEWLRNRGKTVLLQGGIES
Ga0326726_101171773	3300033433	Peat Soil	MSNLAEKSEKNPVTTETEEKKWEPFENREARLRDQKHLEMAYEWLRNRGKMVLLQGGIKS
Ga0326726_101622032	3300033433	Peat Soil	MNNPAEKFCENPATTEIKGKKGELFENTEARLRNQEHLEKAYEWLRNKGKIVPLKGGIES
Ga0326726_101941134	3300033433	Peat Soil	LIGKFEKNPVATEIEEKEWNLFENREAKLRDQTHLELAYEWLKSRRKIVLLKD
Ga0326726_101958644	3300033433	Peat Soil	MRNLAEKSERNAATIETEEKKWELFENTEARLRDQEHFKLAYEWLKRRGKIVLLKGVVES
Ga0326726_102211472	3300033433	Peat Soil	MNNLADKSEKNAVTIEIEEKKWELFENREARLRDREHFELAYEWLRNRGKIVPLKSVIES
Ga0326726_104952282	3300033433	Peat Soil	MGNPAEKFWENPVTTEIKGKKWELFENTEARLRNQEHLEKAYEWLRNRGKIVPLE
Ga0326726_107127212	3300033433	Peat Soil	MGNPAEKFWENPVTTEMKGKKWELFENTEARLRNQEHLEKAYEWLRNRGKIVPLE
Ga0316613_106316281	3300033434	Soil	MSHLAEKSVQNPVMTEMEKKQREIFEDREASLRDQKHLEMAYEWLRNRGKTDLLKG
Ga0316620_101020244	3300033480	Soil	MSNLAEKPEKIHITTEMDEKKWELFESREARLRDQKHLEMAYEWLRNRGKMMRLKGATEN
Ga0316620_101579572	3300033480	Soil	MSNLIEKFEKNPVATEIEEKERKLIENREAKLRNQRHLELAYEWLRSRGKIVLLKDGIES
Ga0316620_106692861	3300033480	Soil	MSHLAEKPEKNPVTKETEEKKWEIFENREARLRDQKHLEMAYEWLRNRGKTDPLKGAIES
Ga0316620_117787592	3300033480	Soil	MGNLAEKSWKNPVTVETEEKKWELFENREARLRDQKHLEMAYEWLKNRGKIGLLKGAIDN
Ga0316620_122315193	3300033480	Soil	MSHLVEKPEKNPVATKTEERKWEIFENREARLRDQKHLEMAYEWLRNRGKTDLLKGAIES
Ga0316624_100012253	3300033486	Soil	MSNLAEKPEKIHITTEMDEKKWELFESREARLRDQKHLEMAYEWLRNRGKMMRLKVATEN
Ga0316624_101451723	3300033486	Soil	MGNPAEKFWENPITTEIKGKKWELFENTEARLRNQEHLQKAYEWLRNRGKIVPSECGIES
Ga0316624_108135252	3300033486	Soil	MGNLAEKSEKNPFTPEAEEKKCELFENREARLRDQKHLEMAYEWLRNRGKIVLLKSAIES
Ga0299912_108495732	3300033489	Soil	MSKLAEKCEKHPVTTETEEKKREFFENKEARLRDQEHLELAYEWLRSRGKTVLLKSATEN
Ga0316628_1002096653	3300033513	Soil	MGNPAEKFWENPITTEIKGKKWELFENMEARLRNQEHLQKAYEWLRNRGKIVPSECGIES
Ga0316628_1009431971	3300033513	Soil	MSNLAEKPEKIHITTEMDEKKWELFESREARLRDQKHLEMAYEWLRNRGKMMRLKVAT
Ga0316616_1035365341	3300033521	Soil	MSHLAEKSVQNPVMTEMEKKQREIFEDREASLRDQKHLEMAYEWLRNRGKTDLLKGAIES
Ga0334965_0049505_1281_1445	3300033991	Sediment	MSNLSEKFEKNSLITEIEEIEEKEWKLFENREAKLRDQKHLEMAYEWLRRRGKI
Ga0373900_065479_158_343	3300034078	Sediment Slurry	MSNLIEKFEKNPVATEIEEKERKLFENREAKLRNQRHLELAYEWLRSRGKIVLLKDGIES
Ga0326723_0119442_810_989	3300034090	Peat Soil	VSGLSNLIGKFEKNPVATEIEEKEWNLFENREAKLRDQTHLELAYEWLKSRRKIVLLKD
Ga0326723_0171376_1_135	3300034090	Peat Soil	MNNLADKSEKNAVTIEIEEKKWELFENREARLRDREHFELAYEWL
Ga0373902_136115_1_180	3300034099	Sediment Slurry	NPAEKFWENPVTTEIKGKKWEPFENTEARSRNQEHLEKAYEWLRNRGKIVLLECGIESL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085862

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences