Metagenome Family F085860

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085860
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	95 residues
Representative Sequence	MNEPAPPSGACLTDAQLAELQGAAPGRAPEALARHLASCERCQARALFGAERPAGRRKATPELPSLRRALLLTGLVLAAMAAFFWSLAKLTGRIE
Number of Associated Samples	70
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.95 %
% of genes near scaffold ends (potentially truncated)	28.83 %
% of genes from short scaffolds (< 2000 bps)	83.78 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.784 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (30.631 % of family members)
Environment Ontology (ENVO)	Unclassified (36.937 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.450 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.09% β-sheet: 0.00% Coil/Unstructured: 56.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13561	adh_short_C2	54.05
PF00106	adh_short	8.11
PF02265	S1-P1_nuclease	1.80
PF11412	DsbC	1.80
PF00005	ABC_tran	1.80
PF00155	Aminotran_1_2	1.80
PF02585	PIG-L	0.90
PF01139	RtcB	0.90
PF13624	SurA_N_3	0.90
PF00501	AMP-binding	0.90
PF01614	IclR	0.90
PF00581	Rhodanese	0.90
PF01610	DDE_Tnp_ISL3	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.90
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.90
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.90
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.78 %
Unclassified	root	N/A	16.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.78 %
Unclassified	root	N/A	16.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.78 %
Unclassified	root	N/A	16.22 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	70.27 %
Unclassified	root	N/A	16.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	69.37 %
Unclassified	root	N/A	16.22 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.37 %
Unclassified	root	N/A	16.22 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000231\|TB_LI09_4DRAFT_10044756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1879	Open in IMG/M
3300001213\|JGIcombinedJ13530_102602513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300001213\|JGIcombinedJ13530_103069390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300004155\|Ga0066600_10150541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300004282\|Ga0066599_101292537	Not Available	550	Open in IMG/M
3300006224\|Ga0079037_100630559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M
3300006224\|Ga0079037_100686541	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300006224\|Ga0079037_100703518	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300009078\|Ga0105106_10813265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300009091\|Ga0102851_10161849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2051	Open in IMG/M
3300009091\|Ga0102851_11349910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300009091\|Ga0102851_12888416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300009091\|Ga0102851_13239653	Not Available	523	Open in IMG/M
3300009111\|Ga0115026_10235847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300009146\|Ga0105091_10247987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300009153\|Ga0105094_10077894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1856	Open in IMG/M
3300009157\|Ga0105092_10285418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300009167\|Ga0113563_10151341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2235	Open in IMG/M
3300009455\|Ga0114939_10264243	Not Available	732	Open in IMG/M
3300012157\|Ga0137353_1057576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300012166\|Ga0137350_1047232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300012931\|Ga0153915_11423792	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300012964\|Ga0153916_11082174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300012964\|Ga0153916_11547497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300014323\|Ga0075356_1151148	Not Available	596	Open in IMG/M
3300014874\|Ga0180084_1001724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2901	Open in IMG/M
3300014875\|Ga0180083_1036393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300014880\|Ga0180082_1003343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3125	Open in IMG/M
3300015255\|Ga0180077_1059273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300017944\|Ga0187786_10015424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1944	Open in IMG/M
3300018055\|Ga0184616_10204638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300018059\|Ga0184615_10178150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300018059\|Ga0184615_10706479	Not Available	512	Open in IMG/M
3300018070\|Ga0184631_10144340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300018083\|Ga0184628_10065989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1836	Open in IMG/M
3300021082\|Ga0210380_10135150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300021090\|Ga0210377_10071371	All Organisms → cellular organisms → Bacteria	2363	Open in IMG/M
3300025130\|Ga0209594_1103970	Not Available	860	Open in IMG/M
3300026463\|Ga0256815_1032971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300027713\|Ga0209286_1126717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300027877\|Ga0209293_10060026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1597	Open in IMG/M
3300027885\|Ga0209450_10911073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300027887\|Ga0208980_10219012	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300027897\|Ga0209254_10183667	All Organisms → cellular organisms → Bacteria → Proteobacteria	1685	Open in IMG/M
3300027900\|Ga0209253_10365526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300027900\|Ga0209253_10468227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300027902\|Ga0209048_10226321	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300028803\|Ga0307281_10098271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300030613\|Ga0299915_10202596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300030613\|Ga0299915_10760787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300031834\|Ga0315290_10285292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1444	Open in IMG/M
3300031834\|Ga0315290_10628686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300031834\|Ga0315290_10859851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300031873\|Ga0315297_10654884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300031949\|Ga0214473_10326288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1747	Open in IMG/M
3300031997\|Ga0315278_10505563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1243	Open in IMG/M
3300031997\|Ga0315278_10552039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300031997\|Ga0315278_11057106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300032143\|Ga0315292_10762381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300032164\|Ga0315283_10445289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1408	Open in IMG/M
3300032164\|Ga0315283_11240675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300032173\|Ga0315268_10563582	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1128	Open in IMG/M
3300032177\|Ga0315276_10487344	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300032256\|Ga0315271_10505058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300032342\|Ga0315286_10068801	All Organisms → cellular organisms → Bacteria	3765	Open in IMG/M
3300032516\|Ga0315273_10087618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4242	Open in IMG/M
3300032516\|Ga0315273_12916620	Not Available	538	Open in IMG/M
3300032829\|Ga0335070_10537310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300032897\|Ga0335071_10275319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1637	Open in IMG/M
3300033004\|Ga0335084_10197080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2092	Open in IMG/M
3300033004\|Ga0335084_10711037	All Organisms → cellular organisms → Bacteria → Acidobacteria	1024	Open in IMG/M
3300033408\|Ga0316605_10250324	All Organisms → cellular organisms → Bacteria → Proteobacteria	1525	Open in IMG/M
3300033408\|Ga0316605_10541525	All Organisms → cellular organisms → Bacteria → Proteobacteria	1079	Open in IMG/M
3300033408\|Ga0316605_11012159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300033413\|Ga0316603_10599612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300033413\|Ga0316603_11741518	Not Available	590	Open in IMG/M
3300033413\|Ga0316603_11978144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300033414\|Ga0316619_12016391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300033416\|Ga0316622_100016084	All Organisms → cellular organisms → Bacteria	6254	Open in IMG/M
3300033416\|Ga0316622_100182711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2219	Open in IMG/M
3300033416\|Ga0316622_100350051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1643	Open in IMG/M
3300033416\|Ga0316622_102964861	Not Available	541	Open in IMG/M
3300033416\|Ga0316622_102974545	Not Available	540	Open in IMG/M
3300033419\|Ga0316601_100923855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300033419\|Ga0316601_100933111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300033419\|Ga0316601_101795513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300033433\|Ga0326726_10271347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1585	Open in IMG/M
3300033433\|Ga0326726_10293295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1524	Open in IMG/M
3300033480\|Ga0316620_10076259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2431	Open in IMG/M
3300033480\|Ga0316620_10181499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1732	Open in IMG/M
3300033480\|Ga0316620_11546567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300033483\|Ga0316629_10171124	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300033483\|Ga0316629_11186595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300033486\|Ga0316624_10113823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1939	Open in IMG/M
3300033486\|Ga0316624_10130866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1835	Open in IMG/M
3300033486\|Ga0316624_12320294	Not Available	500	Open in IMG/M
3300033487\|Ga0316630_10921674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300033489\|Ga0299912_10351461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300033489\|Ga0299912_11264348	Not Available	535	Open in IMG/M
3300033513\|Ga0316628_100033522	All Organisms → cellular organisms → Bacteria	5073	Open in IMG/M
3300033513\|Ga0316628_100182392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2501	Open in IMG/M
3300033513\|Ga0316628_100267951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2103	Open in IMG/M
3300033513\|Ga0316628_104222136	Not Available	511	Open in IMG/M
3300033521\|Ga0316616_102780286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300034076\|Ga0373898_078270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300034100\|Ga0373910_0208969	Not Available	525	Open in IMG/M
3300034177\|Ga0364932_0225355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.20%
Engineered	Engineered	1.80%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	57.66%
Terrestrial	Environmental → Terrestrial	40.54%
Bioremediation	Engineered → Bioremediation	1.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	45.05%
Soil	Environmental → Terrestrial → Soil	37.84%
Sediment	Environmental → Aquatic → Sediment	9.91%
Marine	Environmental → Aquatic → Marine	2.70%
Peat	Environmental → Terrestrial → Peat	1.80%
Metal	Engineered → Bioremediation → Metal	1.80%
Floodplain	Environmental → Terrestrial → Floodplain	0.90%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	32.43%
Lake	Environmental → Aquatic → Freshwater → Lake	14.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.41%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.70%
Pond	Environmental → Aquatic → Freshwater → Pond	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.80%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	32.43%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	14.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.91%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.50%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.70%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.80%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	0.90%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	30.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	14.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.21%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	7.21%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.41%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.50%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.70%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.70%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.80%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.80%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000231	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- LI09_4	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009455	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014323	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025130	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)	Environmental	Open in IMG/M
3300026463	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS6	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034076	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.2	Engineered	Open in IMG/M
3300034100	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.2	Engineered	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_LI09_4DRAFT_100447563	3300000231	Groundwater	MSEPAPPTGACLTDAQISELQGAAPGQAPEALARHLAACERCQARALFGAERPAGRKKPMPEMPSLKRALLLAGLVLAAVVFFFWSLAKLTGRIE*
JGIcombinedJ13530_1026025132	3300001213	Wetland	MSATFPPKGCLTDAQLAELQAAEPGRAPETLALHLASCERCQARALFGRERVAPGPRKAPPEPLTLGRLLVLLGFVLAAMGAFFWTLLKLAGRIE*
JGIcombinedJ13530_1030693901	3300001213	Wetland	GCLSDAELAELQAAPPGRAPEALARHLASCDRCQARALFGAERVARGPRKAMPEPPTMGRALLLAGLVLAAMGAFFWSLLRLAGR*
Ga0066600_101505411	3300004155	Freshwater	TPAGCLTDAQLAQLQSAVPGRAPEALARHLASCERCQARALFGAKRTVGGPRKAPPQPPSLGRALLLAGVVLAAMGAFFWTLLKLTGRIE*
Ga0066599_1012925371	3300004282	Freshwater	MSAGATTPAGCLTDAQLAQLQSAVPGRAPEALARHLASCERCQARALFGAKRTVGGPRKAPPQPPSLGRALLLAGVVLAAMGAFFWTLLKLTGRIE*
Ga0079037_1006305593	3300006224	Freshwater Wetlands	MSEHSTARGVCLTDTQLSELQRAAPGQAPEALARHLAGCERCQARALFGAPRPAWKRRPVPEPPSLARAILLAALVLAAMA
Ga0079037_1006865412	3300006224	Freshwater Wetlands	HIAGRPPSGAGLVRSASMSELATPPGECLTDAQLSDLQGAAPGQAPEALARHLAACERCQARALFGAERPAGRKRPAPEMPSLKRALFLAALVLLAFAFFFWSLAKLTGRIE*
Ga0079037_1007035182	3300006224	Freshwater Wetlands	MSEISPPPAECLTDAQLSELQAATPGQAPEALARHLASCERCQGRALFGAGRPPRKTRPLPQPPSLGRALFLAALVLAAMAAFFWSLAKLVGRLE*
Ga0105106_108132651	3300009078	Freshwater Sediment	PMSEVATPPSGCLTDAQLAELQAAAPGKAPEALARHLATCERCQARALFGAERPAGTKRPVPEFPSVRRAIFLGALVLVVMAAFFWSLAKLSGRLQ*
Ga0105106_110227471	3300009078	Freshwater Sediment	GLQAAIPGQAPEAVARHIASCERCQARALFGAGTRPGFRRPTPEPPSLGRALVLAALLVAALAAFFWTLRRLVGPGG*
Ga0102851_101618493	3300009091	Freshwater Wetlands	MSEHSTARGVCLTDTQLSELQRAAPGQAPEALARHLAGCERCQARALFGAERPAWKRRPVPELPSLGRAIFLAALVLAAMAAFFWSLAQLAGRIE*
Ga0102851_113499102	3300009091	Freshwater Wetlands	MSELATPPGECLTDAQLSDLQGAAPGQAPEALARHLAACERCQARALFGAERPAGRKRPAPEMPSLKRALFLAALVLLAFAFFFWSLAQLTGRIE*
Ga0102851_128884161	3300009091	Freshwater Wetlands	EISPPPAECLTDAQLSELQAATPGQAPEALARHLASCERCQGRALFGAGRPPRKTRPLPQPPSLGRALFLAALVLAAMAAFFWSLAKLVGRLE*
Ga0102851_132396531	3300009091	Freshwater Wetlands	MDATLPAAGCLTDAQLAELQEAAPGRAPEALARHLASCSRCQARALFGAERVAGRSRKPLPEPPSVGRVLWLVGLVLAAMAAFSWTLLKLAGR*
Ga0115026_102358472	3300009111	Wetland	MAPSQHIVARPPNGGWLLPFASMGELSSVAGECLTDGQIAELQSAVPGRAPEGLARHLASCERCQARALFGAERRARRKRPMPETPSLGRALLLAALVLAAMAAFFWSLAKLTGRIE*
Ga0105091_102479871	3300009146	Freshwater Sediment	AGRGRLERHGAPITPHRRPPAKQGVLVTFGPMSEVAAAASGCLTDAQLAEVRAAAPGQAPEALARHLATCERCQARLLFGAVRPSGPRRPLPELPSMRRAFFYGGLVLVAMAAFFWSLAKLTGRLQ*
Ga0105094_100326464	3300009153	Freshwater Sediment	VTGPLDKHGPPAGCLTDEEIAGLQAAIPGQAPEAVARHIASCERCQARALFGAGTRPGFRRPTPEPPSLGRALVLAALLVAALAAFFWTLRRLVGPGG*
Ga0105094_100778943	3300009153	Freshwater Sediment	MSEVATPPSGCLTDAQLAELQAAAPGKAPEALARHLATCERCQARALFGAERPAGTKRPVPEFPSVRRAIFLGALVLVVMAAFFWSLAKLSGRLQ*
Ga0105092_102854182	3300009157	Freshwater Sediment	MSVVATPPSGCLSDAQLAELQAAAPGKAPEALARHLATCERCQARALFGAERPAGTKRPVPEFPSVRRAIFLGGLVLVAMAAFFWSLAKLSGRLQ*
Ga0113563_101513412	3300009167	Freshwater Wetlands	MSELATPPGECLTDAQLSDLQGAAPGQAPEALARHLAACERCQARALFGAERPAGRKRPAPEMPSLKRALFLAALVLLAFAFFFWSLAKLTGRIE*
Ga0114939_102642432	3300009455	Groundwater	MSDAPRGRCLTDAELAELVAAPPGRAPEALARHLAQCERCQARALFGTERRSERASAPRELPTLKRALLLGALVLAAMAAFFWTLQKLAGRIE*
Ga0137353_10575762	3300012157	Soil	MTPPAECLSDSELAQLRAAAPGRAPEALAHHLASCDRCQARALFGAERVVGGPRKAPPQPPSVGRALLLAGVVLAAMGAFFWTLLQLTGRIQ*
Ga0137350_10472321	3300012166	Soil	MTPPAECLSDSQLAQLRAAAPGRAPEALAHHLASCDRCQARALFGAERVVGGPRKAPPQPPSVGRALLIAGVVLAAMGALFWTLLQLTGRVQ*
Ga0153915_114237922	3300012931	Freshwater Wetlands	MSGAENPRGCLSDAEIATLQTAEPGRAPEALARHLASCERCQARALFGTERRPGPRKPVPDPPSLGRALLYAALVLAAMAAFIWTMKR*
Ga0153916_110821742	3300012964	Freshwater Wetlands	MTEHSTPLGVCLTDAQLSELQRAAPGQAPETLARHLAGCERCQARALFGAERPPGKKKPVPEFPSVRRAIFLGALVLVAMAAFFWSLAKLTGRLQ*
Ga0153916_115474971	3300012964	Freshwater Wetlands	MGELSSVAGECLTDGQIAELQSAVPGRAPEGLARHLASRERCQARALFGAERRARKKRPMPETPSLGRALFLAALVLAAMAAFFWSLAKL
Ga0075356_11511481	3300014323	Natural And Restored Wetlands	MSATFPPKGCLTDAQLAELQAAEPGRAPETLALHLASCERCQARALFGRERVASGPRQAPPEPLTLGRLLVL
Ga0180084_10017243	3300014874	Soil	MTPPAECLSDSELAQLRAAAPGRAPEALAHHLASCDRCQARALFGAERVVGGPRKAPPQPPSVGRALLLAGVVLAAMGAFFWTLLQLTGRVQ*
Ga0180083_10363932	3300014875	Soil	MTPPAECLSDSQLAQLRAAAPGRAPEALAHHLASCDRCQARALFGAERVAGGPRKAPPQPPSVGRALLIAGVVLAAMGALFWTLLQLTGRVQ*
Ga0180082_10033434	3300014880	Soil	MNAGAMTHPAECLSDSQLAQLRAAAPGRAPEALAHHLASCDRCQARALFGAERVVGGPRKAPPQPPSVGRALLIAGVVLAAMGAFFWTLLKLTGGIQ*
Ga0180077_10592731	3300015255	Soil	MTPPAECLSDSELAQLRAAAPGRAPEALAHHLASCDRCQARALFGAERVAGGPRKAPPQPPSVGRALLIAGVVLAAMGALFWTLLKLTGRIQ*
Ga0187786_100154243	3300017944	Tropical Peatland	MSDTPAPPSGCLTDEQLAEVRGAEPGKAPESLARHLATCERCQARALFGADRPRARKKPALEFPSIRKALFLGALVIVAMAVFFWSLAKLSGRLQ
Ga0184616_102046382	3300018055	Groundwater Sediment	RPNGADAATLCGMSATIPPPGCPTDAQLTELQAAPPGRAPDALARHLASCNRCQARALFGAERVAGRSRKPPPEPPSVGRVLLLVGLVLAAMAAFFWTLLKLAGR
Ga0184615_101781502	3300018059	Groundwater Sediment	MTPPAGCLTDAQLAELQAVAPGRAPEALARHLASCDRCQARALFGAERVAGGPRKAPAEPPSVGRAFLLAGLVLAVMGAFFWTLLKLAGRTP
Ga0184615_107064791	3300018059	Groundwater Sediment	MSATIPPPGCLTDAQLTELQAAAPGRAPEALVRHLASCDRCQARALFGAERLAGGPRKAPPEPPSVGRALLLAGLVLAAMGAFLWTLLKLAGR
Ga0184631_101443402	3300018070	Groundwater Sediment	MSATIPPPGCLTDAQLTELQAAAPGRAPEALARHLASCDRCQARALFGAERVVGGPRKAPPEPPSVGRAVLLAGLVLAAMGAFLWTLLKLAGR
Ga0184628_100659892	3300018083	Groundwater Sediment	MSATVPPKGCLTDAQLAELAAAAPGRAPEALARHLTSCDRCQARALFGSERAAGGPRKPIPQPPTLGRALLLAGLLLGAMGAFFWSVLKLAGR
Ga0210380_101351502	3300021082	Groundwater Sediment	MSATVPPKGCLTDAQLAELAATAPGRAPEALARHLASCERCQARALFGSERAAGGPRKPIPEPPTLGRALLLAGLLLAAMGAFLWSVLKLAGR
Ga0210377_100713713	3300021090	Groundwater Sediment	MGATLPPTGCLTDAQLAELREAAPGRAPEPLARHLASCSRCQARALFGAERVAGRSRKPPPEPPSVGRVILLVGLVVAAVAAFFWTLLKLAGR
Ga0209594_11039702	3300025130	Groundwater	MSDAPRGRCLTDAELAELVAAPPGRAPEALARHLAQCERCQARALFGTERRSERASAPRELPTLKRALLLGALVLAAMAAFFWTLQKLAGRIE
Ga0256815_10329712	3300026463	Sediment	MSELSPAADQCLTDGQIAELQSAVPGQVPEGLARHLASCERCQARALFGAERRSRKKRPMPQAPSLGRALFLAALVLAAMAAFFWSLAKLTGRIE
Ga0209286_10260682	3300027713	Freshwater Sediment	VTGPLDKHGPPAGCLTDEEIAGLQAAIPGQAPEAVARHIASCERCQARALFGAGTRPGFRRPTPEPPSLGRALVLAALLVAALAAFFWTLRRLVGPGG
Ga0209286_11267171	3300027713	Freshwater Sediment	MSEVATPPSGCLTDAQLAELQAAAPGKAPEALARHLATCERCQARALFGAERPAGTKRPVPEFPSVRRAIFLGALVLVVMAAFFWSLAKLSGRLQ
Ga0209293_100600261	3300027877	Wetland	MSELATPPGECLTDAQLSDLQGAAPGQAPEALARHLAACERCQARALFGAERPVGRKRAMPEIPFLRRAIFLAVLVLVAMAAFLWSLAKLTGRID
Ga0209450_109110731	3300027885	Freshwater Lake Sediment	PLISPHRGPPTKRRRAGTLVRSAAMSQPASALGDCLTDAQLSELREAAPGQAPEALARHLAACERCQARALFGAERPVGKRKPMPEMPSLKRALLLGALALFAMAFFFWSLAKLTGRIE
Ga0208980_102190122	3300027887	Wetland	MSELASAPGECLTDAQLSDLRTAAPGQAPEELARHLAACERCQARALFGAERPAGRKRPTPELPSVKRALLLGALVLVAMAFFFWSLAKLTGRIE
Ga0209254_101836672	3300027897	Freshwater Lake Sediment	VLCPPPTGCLTDTQLVQLQAAVPGRVPEALARHLASCERCQARALFGVARSVGGPRKAPPEPPSVGRALLLAGLVLAAMGAFFWTLLRLAGRIG
Ga0209253_103655263	3300027900	Freshwater Lake Sediment	MSATIPPPGCLTDAQLTELQAAAPGRAPEALARHLASCDRCQARALFGAERVAGRPRKAPREPPSVGRALLLAGLVLAAIG
Ga0209253_104682271	3300027900	Freshwater Lake Sediment	SQPASALGDCLTDAQLSELREAAPGQAPEALARHLAACERCQARALFGAERPVGKKKPMPAMPSLKRALLLGALVLFAVAFFFWSLAKLTGRIE
Ga0209048_102263212	3300027902	Freshwater Lake Sediment	MSDTKAASPAAPGCLTDAQIAELHSVAPGRAPDALARHLASCERCQARALFGAERRPGRTKDRPQPPTLRRALLLAALVLAAMAAFFWTLQKLAGRIE
Ga0307281_100982713	3300028803	Soil	MSATVPPKGCLTDAQLAELAATAPGRAPEALARHLASCERCQARALFGSERAAGGPRKPIPEPPTLGRALLLAGLLLAA
Ga0299915_102025962	3300030613	Soil	MSEVATPPTGCLTDAQLAELQAAAPGKAPEALARHLASCERCQARALFGAARPSGTKKPVPEFPSVRRAVFLAALVIFAMAAFVWSLAKLTGRLL
Ga0299915_107607871	3300030613	Soil	MSEPAPPSGDCLNDAQLAELQGAAPGRAPEALARHLASCERCQARALFGAERPAGRRKATPELPSLRRALLLTGLVLAAMAAFFWSLAKLTGRIE
Ga0315290_102852922	3300031834	Sediment	MTTPAGCLTDAQLVQLQAAVPGRAPERLARHLASCSRCQARALFGAERVVGGPRKAPPQPPSVGRALLLAGLVLAATGAFFWTLLKLTRRIE
Ga0315290_106286862	3300031834	Sediment	MSAGAVPHPAGCLTDAQLAQLQSAVPGRAPEALARHLASCDRCQARALFGAERFVRGPKKAPPEPPSLGRALLLAGVVLAAMGAFFWTLLKLTGRIG
Ga0315290_108598512	3300031834	Sediment	MPRLLPFAGMNAGAVPLPAGCLTAAQLAQLQSAVPGRVPEALARHLASCERCQARALFGAERVVGGPRKTPPEPPSVGRAVLLAGLVLAAMGAFFWTLLKLTGRPG
Ga0315297_106548841	3300031873	Sediment	AGRVGTTGERLLPFAGMSAGAVPPPAGCLTDAQLAQLQSAVPGRAPEALARHLASCDRCQARALFGAERFVRGPKKAPPELPSLGRALLLAGVVLAAMGAFVWTLLKLAGRID
Ga0214473_103262883	3300031949	Soil	MVPRADCLTDAQLTELQAAAPGRAPEALARHLASCDRCQARALFGSERAARGPRKALPEPPSVGRVLLLAALVLAVMGAFFWTLLKLGGRIE
Ga0315278_105055633	3300031997	Sediment	GAVPPPAGCLTDAQLAQLQSAVPGRAPEALARHLASCDRCQARALFGAERFVRGPKKAPPEPPSLGRALLLAGVVLAAMGAFFWTLLKLTGRIG
Ga0315278_105520391	3300031997	Sediment	MTTPAGCLTDAQLGQLQSAVPGRAPETLARHLASCERCQARALFGAEHVVGRPRKAPREPPSVGRALLLAGLVLAAMGAFFWTLLKLTRRIE
Ga0315278_110571062	3300031997	Sediment	MNAGAVPLPAGCLTAAQLAQLQSAVPGRVPEALARHLASCERCQARALFGAERVVGGPKKTPPEPPSVGRAVLLTGLVLAAMGAFFWTLLKLTGRPG
Ga0315292_107623811	3300032143	Sediment	MSAGAVPPPAGCLTDAQLAQLQSAVPGRAPEALARHLASCDRCQARALFGAERFVRGPKKAPPEPPSLGRALLLAGVVLAAMGAFFWTLLKLTGRIG
Ga0315283_104452893	3300032164	Sediment	MSAGAVPPPAGCLTDAQLAQLQSAVPGRAPEALARHLASCDRCQARALFGAERFVRGPKKAPPEPPSLGRALLLAGVVLAAMGAFFWTLLKLTGRIE
Ga0315283_112406752	3300032164	Sediment	MNAGAVPLPAGCLTAAQLAQLQSAVPGRVPEALARHLASCERCQARALFGAERVVGGPRKTPPEPPSVGRAVLLAGLVLAAMGAFFWTLLKLTGRPG
Ga0315268_105635822	3300032173	Sediment	MNAGAVPHPAGCLTDAQLARLQSAVPGRVPEALALHLASCERCQARALFGAERVVGGPRKAPPEPPSVGRAVLLAGLVLAAMGAFFWTLLKLTGRPGWRPG
Ga0315276_104873442	3300032177	Sediment	MNAGAVPHPAGCLTDAQLAQLQSAVPGRVPEALARHLASCERCQARALFGAERVVGGPRKTPPEPPSVGRAVLLAGLVLAAMGAFFWTLLKLTGRPG
Ga0315271_105050582	3300032256	Sediment	MTTPAGCLTDAQLGQLQSAVPGRAPETLARHLASCERCQARALFGAERVVGGPRKAPPQPPSVGRALLLAGLVLAATGAFFWTLLKLTRRIE
Ga0315286_100688012	3300032342	Sediment	MTPPAGCLTDAQLVQLQSAVPGRVPEALALHLASCERCQARALFGAERVVGGPRKAPPEPPSVGRAVLLAGLVLAAMGAFFWTLLKLTGRPG
Ga0315273_100876184	3300032516	Sediment	MNAGAMTPPAGCLTDAQIVQLHAAVPGRAPETLARHLASCSRCQARALFGAERVVGGPRKAPPQPPSVGRALLLAGLVLAATGALFWTLLKLTGRIG
Ga0315273_129166201	3300032516	Sediment	MTTPAGCLTDAQLGQLQSAVPGRAPETLARHLASCERCQARALFGAEHVVGRPRKAPREPPSVGRALLLAGLVLAAMGAFFWTLLKLTRRI
Ga0335070_105373102	3300032829	Soil	MGEVTAPPSGCLTDAQLAELHAAPPGQAPEALARHLATCERCQARALFGAQRASGPKKPPPEFPSLRRTFFYALLVLVAMAAFFWSLAKLSGQLH
Ga0335071_102753191	3300032897	Soil	EVTAPPSGCLTDAQLAELHAAPPGQAPEALARHLATCERCQARALFGAQRASGPKKPPPEFPSLRRTFFYALLVLVAMAAFFWSLAKLSGQLH
Ga0335084_101970803	3300033004	Soil	MSDTAARTSGCLTDEQLAEVRSAEPGKTPEALARHLASCERCQARALFGAERPAAEKKPVPEFPSLRKALFLGALVIVAMAVFFWSLAKLSGRLQ
Ga0335084_107110371	3300033004	Soil	RPPSPGGLVTSRAMSDTPAPPGGCLTDEQLAEVRGADPGKAPESLARHLAACERCQARALFGADRPRARKKPAPEFPSLRKALFLGALVIVAMAVFFWSLAKLSGRLQ
Ga0316605_102503241	3300033408	Soil	VRSAPMSEHSTARGVCLTDTQLSELQRAAPGQAPEALARHLAGCERCQARALFGAERPAWKRRPVPELPSLGRAIFLAALVLAAMAAFFWSLAQLAGRIE
Ga0316605_105415252	3300033408	Soil	MDATLPAAGCLTDAQLAELQEAAPGRAPEALARHLASCSRCQARALFGAERVAGRSRKPLPEPPSVGRVLWLVGLVLAAMAAFSWTLLKLAGR
Ga0316605_110121592	3300033408	Soil	RPSHHIAGRPPSGAGLVRSASMSELATPPGECLTDAQLSDLQGAAPGQAPEALARHLAACERCQARALFGAERPAGRKRPAPEMPSLKRALFLAALVLLAFAFFFWSLAKLTGRIE
Ga0316603_105996122	3300033413	Soil	MSEHSTARGVCLTDTQLSELQRAAPGQAPEALARHLAGCERCQARALFGAERPAWKRRPVPELPSLGRAIFLAALVLAAMAAFFWSLAQLAGRIE
Ga0316603_117415182	3300033413	Soil	MSEPASAPGECLTDAQLSDLRTAAPGQAPEALARHLAACERCQARALFGAERPVGRKRATPEMPSLRRAIFLAVLVLVAMAAFLWSLAKLTGRID
Ga0316603_119781441	3300033413	Soil	PPSGAGLVRSASMSELATPPGECLTDAQLSDLQGAAPGQAPEALARHLAACERCQARALFGAERPAGRKRPAPEMPSLKRALFLAALVLLAFAFFFWSLAKLTGRIE
Ga0316619_120163911	3300033414	Soil	RPPSGAGLVRSAPMSEPASAPGECLTDAQLSDLRTAAPGQAPEALARHLAACERCQARALFGAERPVGRKRAMPEMPSLRRAIFLAVLVLVAMAAFLWSLAKLTGRID
Ga0316622_1000160843	3300033416	Soil	MSELATPPGECLTDAQLSDLQGAAPGQAPEALARHLAACERCQARALFGAERPAGRKRPAPEMPSLKRALFLAALVLLAFAFFFWSLAKLTGRIE
Ga0316622_1001827114	3300033416	Soil	MSEPASAPGECLTDAQLSDLRTAAPGQAPEALARHLAACERCQARALFGAERPVGRKRAMPEMPSLRRAIFLAVLVLVAMAAFLWSLAKLTGRID
Ga0316622_1003500512	3300033416	Soil	MSEISPPPAECLTDAQLSELQAATPGQAPEALARHLASCERCQGRALFGAGRPPRKTRPLPQPPSLGRALFLAALVLAAMAAFFWSLAKLVGRLE
Ga0316622_1006166642	3300033416	Soil	MTGPLDKHGPPAGCLTDEEIAGLQAAIPGQAPEAVARHLASCERCQARALFGAGTRPGFRRPTPEPPSLGRAFVLAALLVAALAAFFWTLRRLVGPGG
Ga0316622_1029648612	3300033416	Soil	MSQTASPPGDCLTDAQLSELREAAPGQAPEALARHLAVCQRCQARALFGAERPAGKRKPMPEMPSLKRALLLGALALFAMAFFFWSLAKLTGRIE
Ga0316622_1029745452	3300033416	Soil	MGELSSVAGECLTDGQIAELQSAVPGRAPEGLARHLASCERCQARALFGAERRARKKRPMPETPSLGRALLLAAL
Ga0316601_1009238551	3300033419	Soil	MDATLPAAGCLTDAQLAELQEAAPGRAPEALARHLASCSRCQARALFGAERVAGRSRKPLPEPPSVGRVLWLVGLVLAAIAAFSWTLLKLAGR
Ga0316601_1009331111	3300033419	Soil	ELQRAAPGQAPEALARHLAGCERCQARALFGAERPAWKRRPVPEPPSLGRAIFLAALVLAAMAAFFWSLAQLAGRIE
Ga0316601_1017955132	3300033419	Soil	SHHIAGRPPSGAGLVRSAPMSELATPPGECLTDAQLSDLQGAAPGQAPEALARHLAACERCQARALFGAERPAGRKRPAPEMPSLKRALFLAALVLLAFAFFFWSLAKLTGRIE
Ga0326726_102713473	3300033433	Peat Soil	MSDTAGRTSGCLTDEQLADLRSAEPGKAPAALARHLASCERCQARALFGAERPAAKKKPVPEFPSLKKALFLGALVIVAMAVFFWSLAKLSGRLQ
Ga0326726_102932952	3300033433	Peat Soil	MSSPAPPPAGCLTDEQLSELQSALPGQAPEALARHLASCERCQARALFGAERPTGLRQPRPQLPSLGRAAFLGALVLVAIAAFFWSLAKLTGRIQ
Ga0316620_100762592	3300033480	Soil	MGELSSVAGECLTDGQIAELQSAVPGRAPEGLARHLASCERCQARALFGAERRARKKRPMPETPSLGRALFLAALVLAAMAAFFWSLAKLTGRIE
Ga0316620_101814993	3300033480	Soil	MSDSAAGPARCLTDEQLTEVGAAEPGKAPEALARHLATCERCQARALFGAQRASAKRQPVPEFPSLRKAMWLGALVLVAMAFFFWSLAKLTGRLQ
Ga0316620_115465672	3300033480	Soil	MSDSGARPRACLTDEQLAEVRAAVPGQAPEALARHLATCERCQERALFGAARPPGRKKKTAEFPSLKKAVFLGALVLAAMAVFFWSLAKLSGRLQ
Ga0316629_101711243	3300033483	Soil	LATPPGECLTDAQLSDLQGAAPGQAPEALARHLAACERCQARALFGAERPAGRKRPAPEMPSLKRALFLAALVLLAFAFFFWSLAKLTGRIE
Ga0316629_111865952	3300033483	Soil	GRPPSGAGLVRSAPMSEHSTARGVCLTDTQLSELQRAAPGQAPEALARHLAGCERCQARALFGAERPAWKRRPVPELPSLGRAIFLAALVLAAMAAFFWSLAQLAGRIE
Ga0316624_101138232	3300033486	Soil	MGEAPAPPSGCLTDAQLAQLQAAAPGQAPEALARHLATCERCQARALFGAERPSGPKKPPPEFPSLRRAIFYAALVLVAMGAFFWSLAKLTGHLQ
Ga0316624_101308662	3300033486	Soil	MSDSAARPRACLTDEQLAEVRAAVPGQAPEALARHLATCERCQERALFGAARPPGRKKKTAEFPSLKKAVFLGALVLAAMAVFFWSLAKLSGRLQ
Ga0316624_123202941	3300033486	Soil	MSDSAAGPARCLTDEQLTEVGAAEPGKAPEALARHLATCERCQARALFGAQRASAKRQPVPEFPSLRKAMWLGALVLVAMAFFFW
Ga0316630_109216742	3300033487	Soil	MVELTSPPGGCLTDAQLSELQRGAPGQVPEALARHLAACERCQARALFGAERPVGRKRAMPEMPSFRRAIFLAVLVLVAMAAFLWSLAKLTGRID
Ga0299912_103514613	3300033489	Soil	MSEPAPPAACLTDAQLSELQSAAPGQAPEALARHLAACERCQARALFGAERPAGRKRPAPEMPSLRRALFLAALVLLALAFFFWSLAKLTGRIE
Ga0299912_112643481	3300033489	Soil	MNEPAPPSGACLTDAQLAELQGAAPGRAPEALARHLASCERCQARALFGAERPAGRRKATPELPSLRRALLLTGLVLAAMAAFFWSLAKLTGRIE
Ga0316628_1000335222	3300033513	Soil	MSEAPAPPSGCLTDAQLAQLQAAAPGQAPEALARHLATCERCQARALFGAERPSGPKKPPPEFPSLRRAIFYAALVLVAMGAFFWSLAKLTGHLQ
Ga0316628_1001823923	3300033513	Soil	MSEVATPPGGCLTDAQLAELRAAAPGQAPQALARHLATCERCQARALFGADRPPGRTKPVPEFPSVRRAIFLGALVLVAMAAFFWSLAKLTGRLR
Ga0316628_1002679514	3300033513	Soil	MGELSSVAGECLTDGQIAELQSAVPGRAPEGLARHLASCERCQARALFGAERRARRKRPMPETPSLGRALLLAALVLAAMAAFFWSLAKLTGRIE
Ga0316628_1042221362	3300033513	Soil	MGEVAVPPSGCLTDAQLAELQAAAPGQAPAALARHLATCERCQARALFGAERPSGPKKPPPEFPSVRRAIFYAALVLVAMAAFFWSLAKLTGR
Ga0316616_1027802861	3300033521	Soil	MSEISPPPAECLTDAQLSELQAATPGQAPEALARHLASCERCQGRALFGAGRPPRKTRPLPQPPSLGRALFLAALVLAAMAAFFWSLAKLTGRIE
Ga0373898_078270_296_538	3300034076	Sediment Slurry	QLAELQAAAPGQAPEALARHLASCERCQARALFGGERPSGAKKPVPEFPSVRRAVFLAVLVLFAMAAFFWSLAKLVGRLE
Ga0373910_0208969_137_424	3300034100	Sediment Slurry	MSEISPPPAECLTDAQLAELQAATPGQAPEALARHLASCERCQGRALFGAGRPPRKTRPLPQPPSLGRALFLAALVLAAMAAFFWSLAKLVGRLE
Ga0364932_0225355_35_322	3300034177	Sediment	MSSLSPPPAECLTDAQISELHEAAPGQAPEALARHLASCERCQARALFGAERPAGARKPRPELPSFGRAVFLAALVLAAMAAFFWSLAKLLGRID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085860

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences