Metagenome Family F085855

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085855
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	72 residues
Representative Sequence	MNNQNKQNTINIEPFINKINAYVFKFMDKSITGKLVEKNGDYLTIELKSGSVIVAHIDSLVSIWNIREKREVV
Number of Associated Samples	59
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.91 %
% of genes near scaffold ends (potentially truncated)	18.02 %
% of genes from short scaffolds (< 2000 bps)	81.08 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.270 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (24.324 % of family members)
Environment Ontology (ENVO)	Unclassified (28.829 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (39.640 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.94% β-sheet: 34.65% Coil/Unstructured: 59.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF06048	DUF927	9.01
PF08706	D5_N	3.60
PF01402	RHH_1	1.80
PF07690	MFS_1	0.90
PF13181	TPR_8	0.90
PF08327	AHSA1	0.90
PF05598	DUF772	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG5519	Predicted ATPase domain of Cch-like helicases, DUF927 family	General function prediction only [R]	9.01

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
All Organisms	root	All Organisms	29.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
cellular organisms	root	All Organisms → cellular organisms	29.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	24.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	21.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	21.62 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	21.62 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
Methanotrichales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales	19.82 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
Methanotrichaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae	19.82 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
Methanothrix	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	19.82 %
Dehalobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
unclassified Methanothrix	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix	16.22 %
unclassified Dehalobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter	5.41 %
Methanothrix soehngenii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.27 %
Methanothrix sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	11.71 %
Dehalobacter sp. 4CP	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP	5.41 %
Methanosaeta sp. PtaU1.Bin060	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	4.50 %
Methanothrix soehngenii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	1.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908038\|B3_all_c_ConsensusfromContig177006	Not Available	786	Open in IMG/M
3300001213\|JGIcombinedJ13530_100280680	Not Available	508	Open in IMG/M
3300001213\|JGIcombinedJ13530_101191320	Not Available	582	Open in IMG/M
3300001213\|JGIcombinedJ13530_102882525	Not Available	600	Open in IMG/M
3300001213\|JGIcombinedJ13530_103123847	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	783	Open in IMG/M
3300002564\|JGI24134J36421_10060335	Not Available	1020	Open in IMG/M
3300002961\|JGI11641J44799_10059502	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	1092	Open in IMG/M
3300003218\|JGI26339J46600_10095686	Not Available	733	Open in IMG/M
3300003432\|JGI20214J51088_10065943	Not Available	2531	Open in IMG/M
3300003432\|JGI20214J51088_10068996	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	2474	Open in IMG/M
3300003432\|JGI20214J51088_10127676	Not Available	1800	Open in IMG/M
3300003432\|JGI20214J51088_10305869	Not Available	1086	Open in IMG/M
3300003432\|JGI20214J51088_11174306	Not Available	505	Open in IMG/M
3300003541\|JGI20214J51650_10061534	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	2511	Open in IMG/M
3300003541\|JGI20214J51650_10092545	Not Available	2050	Open in IMG/M
3300005219\|Ga0069004_10229170	Not Available	566	Open in IMG/M
3300005263\|Ga0071346_1019703	All Organisms → cellular organisms → Archaea	21239	Open in IMG/M
3300006224\|Ga0079037_101745738	Not Available	622	Open in IMG/M
3300006930\|Ga0079303_10149930	Not Available	912	Open in IMG/M
3300006930\|Ga0079303_10247645	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	725	Open in IMG/M
3300006930\|Ga0079303_10273255	Not Available	693	Open in IMG/M
3300006930\|Ga0079303_10405470	Not Available	578	Open in IMG/M
3300009091\|Ga0102851_10226358	Not Available	1775	Open in IMG/M
3300009091\|Ga0102851_11267566	Not Available	814	Open in IMG/M
3300009091\|Ga0102851_11350563	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	790	Open in IMG/M
3300009091\|Ga0102851_13398480	Not Available	511	Open in IMG/M
3300009111\|Ga0115026_10045982	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	2377	Open in IMG/M
3300009111\|Ga0115026_10052475	Not Available	2263	Open in IMG/M
3300009111\|Ga0115026_10222151	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	1276	Open in IMG/M
3300009111\|Ga0115026_10396618	Not Available	998	Open in IMG/M
3300009111\|Ga0115026_10445266	Not Available	950	Open in IMG/M
3300009111\|Ga0115026_10465646	Not Available	931	Open in IMG/M
3300009111\|Ga0115026_10652406	Not Available	805	Open in IMG/M
3300009111\|Ga0115026_11526619	Not Available	557	Open in IMG/M
3300009131\|Ga0115027_10556352	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	837	Open in IMG/M
3300009131\|Ga0115027_11738343	Not Available	520	Open in IMG/M
3300009131\|Ga0115027_11786427	Not Available	514	Open in IMG/M
3300009167\|Ga0113563_10900628	Not Available	1010	Open in IMG/M
3300009167\|Ga0113563_11124171	Not Available	911	Open in IMG/M
3300009167\|Ga0113563_11249040	Not Available	867	Open in IMG/M
3300009167\|Ga0113563_11427161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP	813	Open in IMG/M
3300009179\|Ga0115028_10227791	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	1201	Open in IMG/M
3300009179\|Ga0115028_10847549	Not Available	717	Open in IMG/M
3300009179\|Ga0115028_11493788	Not Available	573	Open in IMG/M
3300009179\|Ga0115028_11791855	Not Available	533	Open in IMG/M
3300009179\|Ga0115028_11964366	Not Available	515	Open in IMG/M
3300009675\|Ga0116149_1060155	Not Available	2167	Open in IMG/M
3300009692\|Ga0116171_10305167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP	867	Open in IMG/M
3300009693\|Ga0116141_10548889	Not Available	578	Open in IMG/M
3300010351\|Ga0116248_10087449	Not Available	2859	Open in IMG/M
3300010352\|Ga0116247_10036881	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	4837	Open in IMG/M
3300010352\|Ga0116247_10864295	Not Available	667	Open in IMG/M
3300010353\|Ga0116236_10013972	All Organisms → cellular organisms → Archaea	10317	Open in IMG/M
3300010429\|Ga0116241_11061969	Not Available	613	Open in IMG/M
3300012931\|Ga0153915_10105671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP	2997	Open in IMG/M
3300014494\|Ga0182017_10471784	Not Available	771	Open in IMG/M
3300014502\|Ga0182021_10612723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP	1303	Open in IMG/M
3300020812\|Ga0214071_1645458	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	5819	Open in IMG/M
3300020814\|Ga0214088_1228564	All Organisms → cellular organisms → Archaea	10297	Open in IMG/M
3300023232\|Ga0224516_1043119	Not Available	574	Open in IMG/M
3300025575\|Ga0209430_1086754	Not Available	765	Open in IMG/M
3300025730\|Ga0209606_1028775	Not Available	2864	Open in IMG/M
3300025836\|Ga0209748_1183580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP	733	Open in IMG/M
3300025980\|Ga0210137_1063812	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	565	Open in IMG/M
3300027715\|Ga0208665_10064053	Not Available	1094	Open in IMG/M
3300027715\|Ga0208665_10149740	Not Available	730	Open in IMG/M
3300027825\|Ga0209039_10034465	Not Available	2408	Open in IMG/M
3300027871\|Ga0209397_10256711	Not Available	824	Open in IMG/M
3300027877\|Ga0209293_10014067	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	2684	Open in IMG/M
3300027877\|Ga0209293_10627763	Not Available	568	Open in IMG/M
3300027887\|Ga0208980_10251008	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	1029	Open in IMG/M
3300027890\|Ga0209496_10605239	Not Available	592	Open in IMG/M
3300027890\|Ga0209496_10613794	Not Available	589	Open in IMG/M
3300027890\|Ga0209496_10833092	Not Available	511	Open in IMG/M
3300027896\|Ga0209777_10321261	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	1189	Open in IMG/M
3300027899\|Ga0209668_10368423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Dehalobacter → unclassified Dehalobacter → Dehalobacter sp. 4CP	935	Open in IMG/M
3300027958\|Ga0209749_1090915	Not Available	911	Open in IMG/M
3300029446\|Ga0167332_1000800	Not Available	22943	Open in IMG/M
3300029987\|Ga0311334_10916973	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	725	Open in IMG/M
3300032143\|Ga0315292_10688490	Not Available	860	Open in IMG/M
3300032342\|Ga0315286_12177638	Not Available	511	Open in IMG/M
3300032401\|Ga0315275_12392531	Not Available	549	Open in IMG/M
3300032401\|Ga0315275_12787429	Not Available	501	Open in IMG/M
3300032516\|Ga0315273_13051351	Not Available	523	Open in IMG/M
3300033408\|Ga0316605_12314694	Not Available	523	Open in IMG/M
3300033408\|Ga0316605_12400020	Not Available	513	Open in IMG/M
3300033413\|Ga0316603_10090258	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	2388	Open in IMG/M
3300033413\|Ga0316603_10651650	Not Available	981	Open in IMG/M
3300033413\|Ga0316603_11221624	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	712	Open in IMG/M
3300033414\|Ga0316619_11073995	Not Available	705	Open in IMG/M
3300033414\|Ga0316619_11282581	Not Available	650	Open in IMG/M
3300033418\|Ga0316625_100278704	Not Available	1173	Open in IMG/M
3300033418\|Ga0316625_100453350	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	992	Open in IMG/M
3300033418\|Ga0316625_100673325	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	862	Open in IMG/M
3300033418\|Ga0316625_101891760	Not Available	583	Open in IMG/M
3300033418\|Ga0316625_102234117	Not Available	546	Open in IMG/M
3300033481\|Ga0316600_11096147	Not Available	565	Open in IMG/M
3300033482\|Ga0316627_100054672	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	2457	Open in IMG/M
3300033482\|Ga0316627_101636137	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	657	Open in IMG/M
3300033483\|Ga0316629_10837157	Not Available	710	Open in IMG/M
3300033483\|Ga0316629_11259757	Not Available	594	Open in IMG/M
3300033487\|Ga0316630_10774072	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	821	Open in IMG/M
3300033488\|Ga0316621_10696271	Not Available	734	Open in IMG/M
3300033488\|Ga0316621_11180036	Not Available	578	Open in IMG/M
3300033521\|Ga0316616_100712254	Not Available	1204	Open in IMG/M
3300033521\|Ga0316616_101408274	Not Available	899	Open in IMG/M
3300033521\|Ga0316616_102941692	Not Available	642	Open in IMG/M
3300033521\|Ga0316616_104561381	Not Available	521	Open in IMG/M
3300033557\|Ga0316617_101937313	Not Available	604	Open in IMG/M
3300033557\|Ga0316617_102240695	Not Available	564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.29%
Engineered	Engineered	11.71%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	51.35%
Terrestrial	Environmental → Terrestrial	36.94%
Wastewater	Engineered → Wastewater	9.01%
Bioreactor	Engineered → Bioreactor	1.80%
Bioremediation	Engineered → Bioremediation	0.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	37.84%
Soil	Environmental → Terrestrial → Soil	29.73%
Marine	Environmental → Aquatic → Marine	13.51%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	8.11%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	5.41%
Peat	Environmental → Terrestrial → Peat	1.80%
Anaerobic	Engineered → Bioreactor → Anaerobic	1.80%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.90%
Tetrachloroethylene And Derivatives	Engineered → Bioremediation → Tetrachloroethylene And Derivatives	0.90%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	26.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	20.72%
Wetlands	Environmental → Aquatic → Marine → Wetlands	13.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.81%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	8.11%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	5.41%
Lake	Environmental → Aquatic → Freshwater → Lake	4.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.60%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.80%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	1.80%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.90%
Tetrachloroethylene	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	24.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	20.72%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	11.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.01%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	8.11%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	5.41%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.60%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.80%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.80%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	1.80%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	24.32%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	19.82%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	11.71%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	8.11%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	8.11%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	5.41%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.50%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.70%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.80%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.80%
Anaerobic Enrichment Culture	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Anaerobic Enrichment Culture	0.90%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.90%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.90%
Biosolids	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids	0.90%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.90%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	0.90%
Bioremediated Contaminated Groundwater	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified → Bioremediated Contaminated Groundwater	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300005219	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2	Environmental	Open in IMG/M
3300005263	Freshwater pond sediment microbial communities from Middleton WI, enriched with Humic Acid Only under anaerobic conditions - HA Sample 3	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009675	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG	Engineered	Open in IMG/M
3300009692	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010352	AD_JPHWca	Engineered	Open in IMG/M
3300010353	AD_USCAca	Engineered	Open in IMG/M
3300010429	AD_USRAca	Engineered	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300020812	Anaerobic digester digestate microbial community, University of Toronto, Ontario, Canada - DG074 megahit	Engineered	Open in IMG/M
3300020814	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahit	Engineered	Open in IMG/M
3300023232	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T0	Environmental	Open in IMG/M
3300025575	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-33A (SPAdes)	Environmental	Open in IMG/M
3300025730	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025980	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027958	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-47 (SPAdes)	Engineered	Open in IMG/M
3300029446	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP13 - Kappala-digested 114	Engineered	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_all_c_01658660	2124908038	Soil	MINQYNINFEPFLNKINAYTFKFLEKSITGKLIELNGDFITVELRSGSMIVAHIDSLVSIWNIREKPKTEVA
JGIcombinedJ13530_1002806802	3300001213	Wetland	MENQNKQNNINIEPFINKINAYVFKFLDKSTTGRLVEKNGDYLTIELKSGSVLVAHVDSLISIWNVRSKSDSKVV*
JGIcombinedJ13530_1011913201	3300001213	Wetland	MENQNKQDKINIEPFINKINAYVFNFLDKSITGRLVDHNEDFLTIELKSGSLIVAHIDSLVSIWNIREK
JGIcombinedJ13530_1028825252	3300001213	Wetland	MENQNKQSEINIEPFLNKINAYAFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKREVV*
JGIcombinedJ13530_1031238472	3300001213	Wetland	MKNENKQTKINIEPFLNKINAYAFDFLDKSITGKLVDQNGAFLTIELRSGSLIVAHIDSLVSIWNIREKKEVV*
JGI24134J36421_100603351	3300002564	Arctic Peat Soil	MQXKNKQITINIEPFMNRINAYVFSFMDKSITGRLVEKNGDYITVELKSGSVIVANIDSLVSIWHIR
JGI11641J44799_100595022	3300002961	Wetland	MQNKNNQNTINIEPFMNRINAYVFKFMEKSITGKLIEKNGDYLTIELKSGSVIVAHIDSLVSIWNIRQKQEMV*
JGI26339J46600_100956862	3300003218	Bog Forest Soil	MQTENKQHNINVEPFMQKINAYKFNFMNNSITGRLIEKNGDFISVEMKSGSIIVAHIDSLVSIWNIRTKKEAV*
JGI20214J51088_100659432	3300003432	Wetland	MGNQNKQSKINIEPFMNKINAYVLSFMPHSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKREVV*
JGI20214J51088_100689962	3300003432	Wetland	MQNKDNQNTINIEPFINRINAYVFKFMEKSITGKLIEKNGDYLTIELKSGSVIVAHIDSLVSIWNIRQKQEMV*
JGI20214J51088_101276762	3300003432	Wetland	MENQNKQSKINIEPFMNKINAYVFNFMPNSITGKLVEQNGDYLKIELKSGGVIVAHIDSMVSIWNIREKKEVV*
JGI20214J51088_103058692	3300003432	Wetland	GIIMENQNKQTTINIEQFMNKINAYVFKFMDKSITGKLIEQNGDFITVELKSGSVIVAHIDSLVSIWNIREKREVI*
JGI20214J51088_111743062	3300003432	Wetland	MENQNKQSKINIEPFMNKTNAYAFNFMPRSITGKLVEQTGDYLKIELKSGGVIIAHIDSLISIWNIRPKQEMV*
JGI20214J51650_100615344	3300003541	Wetland	MQNKNNQNTINIEPFINRINAYVFKFMEKSITGKLIEKNGDYLTIELKSGSVIVAHIDSLVSIWNIRQKQEMV*
JGI20214J51650_100925452	3300003541	Wetland	MENQNKQPKINIEPFMNKINAYVFSFMPHSITGRLVEQNGDYLKIEMKSGGVIVAHIDSLISVWNIREKLEVV*
Ga0069004_102291701	3300005219	Natural And Restored Wetlands	ENQNKQSKINIEPFINKINAYVFNFMPHSITGKLVEQNGDFLKIELKSGGVIVAHIDSMVSIWNIREKKEVV*
Ga0071346_101970325	3300005263	Anaerobic Enrichment Culture	MSNQNKQNTINIEPFINKINAYVFKFMDKSITGRLVEKNGDYLTIELKSGSVIVANIESLVSIWNIREKKGVV*
Ga0079037_1017457382	3300006224	Freshwater Wetlands	MENQNKQTKINIEPFLNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKRELV*
Ga0079303_101499302	3300006930	Deep Subsurface	MSNENKLIKINIEPFMNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGFVVAHIDSLISVWNIRQKQEVV*
Ga0079303_102476451	3300006930	Deep Subsurface	FMGKINAYVFKFMDKSITSRLVEKNGDYLTIELRSGSMIVAHIESLVSIWNIREKREVV*
Ga0079303_102732552	3300006930	Deep Subsurface	MENQNKQSKINIEPFMNKINAYVFSFMPHSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKQEVV*
Ga0079303_104054701	3300006930	Deep Subsurface	MEIQNKQMKMNIEPFLNKINAYVFQFMDHSITGRLVDHNDDYITVELRSGSVIVAHIDSLVSIWNIREKREVV*
Ga0102851_102263582	3300009091	Freshwater Wetlands	MEKQNKQNTINIKPFMGKINAYVFKFMDKSITGKLIEKNGDYLTIELKSGSVIVAHIDSLVSIWNIREKREVM*
Ga0102851_112675662	3300009091	Freshwater Wetlands	MSNENKLIKINIEPFMNKINAYVFKFMEHSITGKLVEQNGDYLTIELKSGGVIVAHIDSLVSIWNIREKREVV*
Ga0102851_113505632	3300009091	Freshwater Wetlands	MENQNKKPKINIKPFMNKINAYVFNFMSNSITGKLVEQNGDYLKIELKSGSVIVAHIDSLVSIWNIREKQEVV*
Ga0102851_133984802	3300009091	Freshwater Wetlands	MEIQNKQLKINIEPFMNKINAYVFRFMDKSITGRLIEYNGDYLTIELKSGSLILADIDSLVSIWNIREKREVV*
Ga0115026_100459821	3300009111	Wetland	NKQNTINIEPFMGKINAYVFKFMDKSITGKLIEKNGDYLTIELRSGSVIVAHIDSLVSIWNIREKREVV*
Ga0115026_100524751	3300009111	Wetland	MNNKNKLNTINIEPFMNKINAYVFKFMEHSITGKLVEQNGDYLTIELKSGGVIVAHIDSLISVWNIRERRDV
Ga0115026_102221511	3300009111	Wetland	MSNENKLIKINIEPFMNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLISIWNIRPKQEVV*
Ga0115026_103966182	3300009111	Wetland	MNNQNKQNTINIEPFINKINAYVFKFMDKSITGKLVEKNGDYLTIELKSGSVIVEHIDSLVSIWNIREKREVV*
Ga0115026_104452662	3300009111	Wetland	MSNENKLIKINIEPFMGKINAYVFKFMDHSITGKLVEQNGDYLTIELKSGGVIVAHIDSLVSIWNIRQKQEVV*
Ga0115026_104656462	3300009111	Wetland	MENQNKQNTINIEPFMGKINAYVFKFMDKSITGRLVEKNGDYLTIELKSGSVIVAHIDSLVSIWNIREKREVM*
Ga0115026_106524061	3300009111	Wetland	MENQNKQNIINIEPFMGKINTYVFRFMDKSITGRLVEKNGDYLTIELRSGSVIVAHIDSLVSIWHIRQKDGAA*
Ga0115026_115266191	3300009111	Wetland	MSNENKLIKINIEPFMNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVVVAHIDSLVSIWNIREKQEVV*
Ga0115027_105563522	3300009131	Wetland	MNNENKLIKINIEPFVNKINAYVFNFMPRSITGKLVEQNGDYLTVELRSGSVIVAHIGSLVSIWNIREKKGVV*
Ga0115027_117383431	3300009131	Wetland	MKNQNKQFKIDIEPFLNKINAYVFSFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIRPKQEVV*
Ga0115027_117864271	3300009131	Wetland	MSNENKLNKINIEPFINKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKREVV*
Ga0113563_109006282	3300009167	Freshwater Wetlands	MENQNKQTKINIEPFLNKINAYVFSFMPNSITGKLVEQNGDYLKIELKSGGVIVAHIDSMISIWNIREKREVI*
Ga0113563_111241712	3300009167	Freshwater Wetlands	MENQNKQSKINIEPFMNKINAYVFNFMPHSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKREVI*
Ga0113563_112490401	3300009167	Freshwater Wetlands	RGKNMSNENKLIKINIEPFLNKINAYVFKFMEHSITGKLVEQNGDYLTIELKSGGVIVAHIDSLISVWNIRERRDVV*
Ga0113563_114271611	3300009167	Freshwater Wetlands	MEYQNKSTKINIEPFINKINAYVFKFMDKSITGKLVEKNGDFITIELKSGSVIVAHIDSLVSIWNIREKREVV*
Ga0115028_102277912	3300009179	Wetland	MENQNKQTKINIEPFLNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKQEVV*
Ga0115028_108475491	3300009179	Wetland	INIEPFMNKINAYVFKFMEHSITGKLVQQNGDYLTIELKSGGVIVAHIDSLISVWNIRERRDVV*
Ga0115028_114937882	3300009179	Wetland	MENKNKQFKINIEPFLNKINAYAFNFMPNSITGKLVEQNGDYLKIELKSGGVIVAHIDSMISIWNIRQQQEVV*
Ga0115028_117918552	3300009179	Wetland	MNNQNKQNTINIEPFINKINAYVFKFMDKSITGKLVEKNGDYITIELKSGSVIVAHIDSLVSIWNIREKREVV*
Ga0115028_119643661	3300009179	Wetland	MSNENKLIKINIEPFMNKINAYVFKFMDHSITGKLVEQKGDYLTIELKSGSIIVAHIDSLVSIWHTRQKHGVV*
Ga0116149_10601554	3300009675	Anaerobic Digestor Sludge	MENENKQSKINIEPFMNKINAYVFNFLPKSITGRLIEKNGDYLTIELKSGDLIVAHVDSLVSIWSIRERRDVV*
Ga0116171_103051672	3300009692	Anaerobic Digestor Sludge	MNNQNKQININFERFLNKINAYVFRFIDKSITGKLLSYDGNCLIIELRSGSLMVADIDSLVSIWNVREKQELF*
Ga0116141_105488892	3300009693	Anaerobic Digestor Sludge	MNNENKLIKINIEPFLNKINAYVFNFMPNSITDKLVEQNGDYLTIELKSGGVIVAHIDSMISIWNIREKREAI*
Ga0116248_100874492	3300010351	Anaerobic Digestor Sludge	MKSQNKQLKINIEPFLGKINAYVFTFMDKSITGRLIKQDGDFLTIELKSGGLIVARFDSLVSIWNIREKQGAI*
Ga0116247_100368816	3300010352	Anaerobic Digestor Sludge	MENQNKQTTINIEPFMNKINAYVFKFMYKSITGKLIEQNGDFITIELKSGSVIVAHIDSLVSIWNIREKREVV*
Ga0116247_108642952	3300010352	Anaerobic Digestor Sludge	MDNQNKQNTINIEPFMNKINAYVFRFMDRSITGRLVEKNGDYITVELKSGSVIVAHIDSLVSIWNIRGKKDVV*
Ga0116236_1001397211	3300010353	Anaerobic Digestor Sludge	MESQNKQLKINIEPFMNKINAYVFRFMDKSITCRLIEQNGDYLTIELKSGSVVVAHIDSMISIWSIRDRKEAA*
Ga0116241_110619691	3300010429	Anaerobic Digestor Sludge	MENQNKQSKINIEPFLNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIRE
Ga0153915_101056711	3300012931	Freshwater Wetlands	MENQNKQNTINIELFINKINAYVFNFMDKSITGRLVEKNGEYITIELKSGSLIVAHIDSLVSIWNIRSKSEVT*
Ga0182017_104717842	3300014494	Fen	METNNKPNKINVDPFMNAINAYAFTFLPKSITGKLIEKSGDYIKIEMKSGSVIVAHIDSLVSIWQLRQKPGVV*
Ga0182021_106127232	3300014502	Fen	MDNQNNQNTINIEPFMNRINAYVFKFMDKSITGRLVEKNGDYITVELKSGSVIVANIDSLVSIWHIRQKQGVL*
Ga0214071_16454587	3300020812	Anaerobic Digester Digestate	MKNKQNDINIEPFINKINAYVFKFMDHSITGKLTGKNGDYVLIEMKSGGIICAHIDTLLSIWHIREKPKVEEV
Ga0214088_122856410	3300020814	Granular Sludge	MENQNKQSKINIEPFKGKINAYVFRFMDKSITGRLVGQNGDYLTIELKSGGVIVAHIDSLVSIWNIRQKHEAV
Ga0224516_10431192	3300023232	Soil	METNNKPNKINVDPFMNAINAYAFTFLPKSITGKLIEKSGDYIKIEMKSGSVIVAHIDSLVSIWQLRQKPGVV
Ga0209430_10867542	3300025575	Arctic Peat Soil	MQNKNKQITINIEPFMNRINAYVFSFMDKSITGRLVEKNGDYITVELKSGSVIVANIDSLVSIWHIRQKQEVV
Ga0209606_10287753	3300025730	Anaerobic Digestor Sludge	MENENKQSKINIEPFMNKINAYVFNFLPKSITGRLIEKNGDYLTIELKSGDLIVAHVDSLVSIWSIRERRDVV
Ga0209748_11835801	3300025836	Arctic Peat Soil	MNNQNKQNTINIEPFVNKINAYVFKFMDHSITGKLAEKNGDYLTIELKSGSIIVAHIDSLVSIWHIRQKHEVV
Ga0210137_10638122	3300025980	Natural And Restored Wetlands	MQNKNNQNTINIEPFMNRINAYVFKFMEKSITGKLIEKNGDYLTIELKSGSVIVAHIDSLVSIWNIRQKQEMV
Ga0208665_100640532	3300027715	Deep Subsurface	MENQNKQTKINIEPFLNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKREMV
Ga0208665_101497402	3300027715	Deep Subsurface	MENQNKQSKINIEPFLNKINAYVFNFMPRSITGKLIEQNGDYLKIELKSGGVIVAHIDSLISVWNIRERRDVV
Ga0209039_100344653	3300027825	Bog Forest Soil	MQTENKQHNINVEPFMQKINAYKFNFMNNSITGRLIEKNGDFISVEMKSGSIIVAHIDSLVSIWNIRTKKEAV
Ga0209397_102567112	3300027871	Wetland	MKNQNKQFKIDIEPFLNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLISVWSIRQKQEVV
Ga0209293_100140673	3300027877	Wetland	MENQNKQNTINIEPFMGKINAYVFRFMDKSITGKLIEKNGDYLTIELRSGSVIVAHIDSLVSIWNIREKREVV
Ga0209293_106277632	3300027877	Wetland	MSNENKLIKINIEPFMNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLISIWNIRPKQEVV
Ga0208980_102510082	3300027887	Wetland	MQYNDKQNCINIEPFINRINAYVFKFMKKSITGKLIEKNGDYLTIELKSGSVIVAHIDSLVSIWNIRQKQEMV
Ga0209496_106052391	3300027890	Wetland	SNENKLIKINIEPFLNKINAYVFSFMPHSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKQEVV
Ga0209496_106137942	3300027890	Wetland	GHNMSNENKLIKINIEPFMNRINAYVFNFMPNSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKKVVV
Ga0209496_108330922	3300027890	Wetland	MENQNKQSKINIEPFTNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSMISIWNIRQQQEVV
Ga0209777_103212611	3300027896	Freshwater Lake Sediment	MNNQNKQSKINIEPFITKINAYVFKFLDKSITGKLVEKNGDYLTIELKSGSVIVAHIDSLISIWNIRQKQEVV
Ga0209668_103684232	3300027899	Freshwater Lake Sediment	MNNQNKQNTINIEPFINKINAYVFKFMDKSITGKLVEKNGDYITIELKSGSMIVAHIDSLVSIWHIRQKQEVV
Ga0209749_10909151	3300027958	Bioremediated Contaminated Groundwater	MDNQNKQNTINIEPFMKKINAYVFRFMDKSITGRLVEKNGDYITVELKSGSVIVAHIDSLLLIWNVREKKGVV
Ga0167332_10008007	3300029446	Biosolids	MKNQNKQIKINIEPFLGKINAYVFSFMKKSITGRLIEQNGDFLTVELKSGSVVVAHIDSLVSIWNIREKRGAV
Ga0311334_109169731	3300029987	Fen	KINVDPFMNAINAYAFTFLPKSITGKLIEKSGDYIKIEMKSGSVIVAHIDSLVSIWQLRQKPGVV
Ga0315292_106884902	3300032143	Sediment	MNNQNKQNTINIELFINKINAYVFKFMDKSITGKLVEKNGDYLTIELKSGSVIVAHIDSLVSIWNIREKQGVV
Ga0315286_121776382	3300032342	Sediment	MENQNKQNTINIEPFINKINAYVFKFMDKSITGKLVEKNGDYITIELKSGSIIVAHLDSLVSIWNIRQKQEVA
Ga0315275_123925312	3300032401	Sediment	MEIKNKQNNINVEPFINKINAYMFNFMDHSITGRLVEKNGNFITVELRSGSVIVAHIDSLISIWNIRSKSVVV
Ga0315275_127874291	3300032401	Sediment	MNNQNKQNTINIGPFINKINAYVFKFMDKSITGKLVEKNGNYITIELKSGSVIVAHIDSLVSIWNIRQKQEVV
Ga0315273_130513511	3300032516	Sediment	MNNQNKQNTINIELFINKINAYVFKFMDKSITGKLVEKNGDYLTIELKSGSVIVAHIDSLVSIWNIRQKQEVV
Ga0316605_123146942	3300033408	Soil	MSNENKLIKINIEPFMNKINAYVFNFMPHSITGKLVEQNGDYLKIELKSGGVIVANINSMVSIWNIREKRELV
Ga0316605_124000202	3300033408	Soil	MENQNKQNTINIEPFMGKINAYVFKFMDKSITGRLVEKNGDYLTIELKSGSMIVAHIESLVSIWNIREKKGGNLVDGPD
Ga0316603_100902583	3300033413	Soil	MENQNKQSKINIEPFLNKINAYVFNFMPNSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIRPKQEVV
Ga0316603_106516502	3300033413	Soil	MSNENKLSKINIEPFINKINAYVFNFMPRSITGKLIEQNGDYLKIELKSGGVVVAHIDSLISVWNIRQKQEVV
Ga0316603_112216242	3300033413	Soil	IMENQNKQNTINIERFMGKINAYVFKFMDKSITGRLVEKNGDYLTIELKSGSVIIAHIDSLVSIWNIREKREVV
Ga0316603_116440093	3300033413	Soil	MESQNKQNTINIEPFMGKINAYVFRFMDKSITGRLVEKNGDYLTIELRSGSVIVAHIDS
Ga0316619_110739952	3300033414	Soil	MSNENKLIKINIEPFLNKINAYVFSFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLISVWNIRERRDVV
Ga0316619_112825811	3300033414	Soil	MENQNKQNTINIEPFMGKINAYVFNFMPRSITGKLVEQNGDYLTVELRSGSVIVAHIGSLVSIWNIREKKGVV
Ga0316625_1002787043	3300033418	Soil	MQNNNKQTTINIEPFMNKINAYMFSFMDKSITGRLVEKNGNFITIELKSGSVIVAHIDSLVSIWSIRQKQELV
Ga0316625_1004533503	3300033418	Soil	MQNNNKQTTINIEPFMNKINAYVFKFMDKSITGKLIEKNGDYLTIELKSGSVIVAHIDSLVSIWNIRQKQEAV
Ga0316625_1006733251	3300033418	Soil	MENQNKQNTINIERFMGKINAYVFKFMDKSITGRLVEKNGDYLTIELKSGSVIIAHIDSLVSIWNIREKREVV
Ga0316625_1018917601	3300033418	Soil	MSNENKLTKINIEPFMNKINAYVFKFMEHSITGKLVEQNGDYLTIELKSGGVIVAHIDSLISVWNIRERRDVV
Ga0316625_1022341172	3300033418	Soil	MNNQNKQNTINIEPFINKINAYVFKFMDKSITGKLVEKNGDYLTIELKSGSVIVAHIDSLVSIWNIREKREVV
Ga0316600_110961472	3300033481	Soil	MENQNKQSKINIEPFMNKINAYVFNFMPHSITGKLVEQNGDYLKIELKSGGVIVAHIDSMISVWNIRQKQEVV
Ga0316627_1000546722	3300033482	Soil	MEKQNKQNTINIEPFMGKINAYVFRFMDKSITGKLVEKNGDFLTIELKSGSVIVAHIDSLVSIWNIREKREVV
Ga0316627_1016361372	3300033482	Soil	QSEINIEPFLNKINAYVFSFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKQEVV
Ga0316629_108371572	3300033483	Soil	MQNNNKQTTINIEPFMNKINAYVFKFMDKSITGKLIEKNGDYLTIELKSGSVIVAHIDSLVSIWNIREKREVP
Ga0316629_112597572	3300033483	Soil	MENQNKQTKINIEPFMNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREKQEVV
Ga0316630_107740721	3300033487	Soil	MENQNKQNTINIEPFMGKINAYVFKFMDKSITGRLVENNADYLTIELRSGSVIVAHIDSLVSIWNIREKR
Ga0316621_106962712	3300033488	Soil	MQNNNKQTTINIEPFMNKINAYVFKFMDKSITGKLIEKNGDYLTIELKSGSVIVAHIDSLVSIWNIRQKQEMV
Ga0316621_111800362	3300033488	Soil	NIEPFMGKINAYVFKFMEKSITGRLIEKNGDYLTIELRSGSVIVAHIDSMVSIWNIREKREVM
Ga0316616_1007122543	3300033521	Soil	MQNNNKQTTINIEPFMNKINAYVFKFMDKSITGKLIEKNGDYLTIELKSGSVIVSHIDSLVSIWNIRQKQEAV
Ga0316616_1014082741	3300033521	Soil	MNNKNKLTKINIEPFMNKINAYVFKFMEHSITGKLVEKNGDYLTIELKSGGVIVAHIDSLISVWNIRERRDVV
Ga0316616_1029416921	3300033521	Soil	MENQNKQSKINIEPFLNKINAYVFSFMPHSITCKLVELNGDYLKIELKSGGVIVAHIDSLVSI
Ga0316616_1045613812	3300033521	Soil	MENQNKQNTINIEPFMGKINAYVFKFMDKSITGRLVENNGDYLTIELKSGSVIVAHIDSLVSIWNIREKKGVV
Ga0316617_1019373131	3300033557	Soil	MSNENKLIKINIEPFMNKINAYVFNFMPRSITGKLIEQNGDYLKIELKSGGIIVAHIDSLVSIWNIREKREVP
Ga0316617_1022406951	3300033557	Soil	MENQNKQTKINIEPFLNKINAYVFNFMPRSITGKLVEQNGDYLKIELKSGGVIVAHIDSLVSIWNIREK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085855

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences