Metagenome / Metatranscriptome Family F085831

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085831
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	115 residues
Representative Sequence	FRHFGSGKRLFKAVASSQSGALARRETTQRLERLVQAELSRLQATRKLDAFKLQTVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPTAL
Number of Associated Samples	92
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.90 %
% of genes near scaffold ends (potentially truncated)	99.10 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.018 % of family members)
Environment Ontology (ENVO)	Unclassified (44.144 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.856 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.25% β-sheet: 0.00% Coil/Unstructured: 42.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
a.121.1.1: Tetracyclin repressor-like, C-terminal domain	d3c07a2	3c07	0.66765
f.44.1.0: automated matches	d2b2ha_	2b2h	0.65296
a.121.1.1: Tetracyclin repressor-like, C-terminal domain	d3q0wa2	3q0w	0.65204
a.121.1.1: Tetracyclin repressor-like, C-terminal domain	d2np3a2	2np3	0.64998
a.93.1.2: Myeloperoxidase-like	d1q4ga1	1q4g	0.63749

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF12681	Glyoxalase_2	2.70
PF01872	RibD_C	2.70
PF12833	HTH_18	2.70
PF01479	S4	2.70
PF13602	ADH_zinc_N_2	1.80
PF02353	CMAS	0.90
PF08240	ADH_N	0.90
PF07883	Cupin_2	0.90
PF03841	SelA	0.90
PF08241	Methyltransf_11	0.90
PF12840	HTH_20	0.90
PF08352	oligo_HPY	0.90
PF03706	LPG_synthase_TM	0.90
PF01594	AI-2E_transport	0.90
PF13460	NAD_binding_10	0.90
PF01183	Glyco_hydro_25	0.90
PF00211	Guanylate_cyc	0.90
PF08450	SGL	0.90
PF08818	DUF1801	0.90
PF00041	fn3	0.90
PF04542	Sigma70_r2	0.90
PF00903	Glyoxalase	0.90
PF00107	ADH_zinc_N	0.90
PF00856	SET	0.90
PF08281	Sigma70_r4_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.70
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.70
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.90
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.90
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.90
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.90
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.90
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.90
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.90
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.90
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.90
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.90
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.90
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.90
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.90
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.90
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.90
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	71.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	69.37 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	68.47 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	67.57 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.90 %
Chlorobia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia	0.90 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	67.57 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.90 %
Chlorobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales	0.90 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	67.57 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.90 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	0.90 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	67.57 %
Chlorobium/Pelodictyon group	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group	0.90 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.90 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	67.57 %
Chlorobium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium	0.90 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.90 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	67.57 %
Chlorobium ferrooxidans	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → Chlorobium ferrooxidans	0.90 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.90 %
Chloroflexi bacterium RBG_16_70_13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004157\|Ga0062590_101717237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	640	Open in IMG/M
3300004157\|Ga0062590_102792601	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300004479\|Ga0062595_100552574	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300004643\|Ga0062591_100985305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	800	Open in IMG/M
3300004643\|Ga0062591_100991667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	798	Open in IMG/M
3300004643\|Ga0062591_101536989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300005181\|Ga0066678_10883594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300005330\|Ga0070690_100152136	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300005331\|Ga0070670_101721854	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005337\|Ga0070682_101552257	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005356\|Ga0070674_101687658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	573	Open in IMG/M
3300005364\|Ga0070673_100807352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	866	Open in IMG/M
3300005365\|Ga0070688_100476172	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300005440\|Ga0070705_100983516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	684	Open in IMG/M
3300005445\|Ga0070708_101409858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	650	Open in IMG/M
3300005450\|Ga0066682_10565319	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005456\|Ga0070678_101827391	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005457\|Ga0070662_100242782	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300005459\|Ga0068867_101060504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	738	Open in IMG/M
3300005536\|Ga0070697_100848017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	809	Open in IMG/M
3300005547\|Ga0070693_101315008	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005548\|Ga0070665_101358770	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005549\|Ga0070704_101914548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300005555\|Ga0066692_11019801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300005557\|Ga0066704_10450324	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005563\|Ga0068855_101876072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	608	Open in IMG/M
3300005564\|Ga0070664_100361159	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300005578\|Ga0068854_100656277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	901	Open in IMG/M
3300005578\|Ga0068854_102089615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300005586\|Ga0066691_10476137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	746	Open in IMG/M
3300005616\|Ga0068852_102009334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300005834\|Ga0068851_11031352	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005840\|Ga0068870_11372087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300006031\|Ga0066651_10118071	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300006237\|Ga0097621_101280516	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300006358\|Ga0068871_102315580	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006605\|Ga0074057_11969587	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006605\|Ga0074057_12201705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	780	Open in IMG/M
3300006904\|Ga0075424_101529949	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300009011\|Ga0105251_10336540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300009011\|Ga0105251_10600930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300009012\|Ga0066710_101155935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1198	Open in IMG/M
3300009012\|Ga0066710_103609801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300009098\|Ga0105245_12814450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539	Open in IMG/M
3300009156\|Ga0111538_12774153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300009174\|Ga0105241_11679150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300009176\|Ga0105242_12651541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300009553\|Ga0105249_10300192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1610	Open in IMG/M
3300011107\|Ga0151490_1251657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300011119\|Ga0105246_12152182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300012198\|Ga0137364_11085018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300012200\|Ga0137382_11182754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300012353\|Ga0137367_10379536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1004	Open in IMG/M
3300012896\|Ga0157303_10007762	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300012907\|Ga0157283_10263984	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012913\|Ga0157298_10355933	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → Chlorobium ferrooxidans	541	Open in IMG/M
3300012916\|Ga0157310_10263343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300012930\|Ga0137407_10623117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1013	Open in IMG/M
3300012957\|Ga0164303_10626999	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300012961\|Ga0164302_10456781	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300012961\|Ga0164302_10867750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	689	Open in IMG/M
3300012961\|Ga0164302_10959026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	662	Open in IMG/M
3300012977\|Ga0134087_10321294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	731	Open in IMG/M
3300012984\|Ga0164309_10123809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1676	Open in IMG/M
3300012984\|Ga0164309_11006279	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012984\|Ga0164309_11627712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300012985\|Ga0164308_10346981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_70_13	1196	Open in IMG/M
3300012987\|Ga0164307_10655011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	817	Open in IMG/M
3300012987\|Ga0164307_11209851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300012988\|Ga0164306_10285056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1199	Open in IMG/M
3300013306\|Ga0163162_13496377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300013308\|Ga0157375_11432132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	814	Open in IMG/M
3300013308\|Ga0157375_11825446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	721	Open in IMG/M
3300014745\|Ga0157377_11527233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300014969\|Ga0157376_11096279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	822	Open in IMG/M
3300015077\|Ga0173483_10522266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300015373\|Ga0132257_100651208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1305	Open in IMG/M
3300015373\|Ga0132257_100872196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1127	Open in IMG/M
3300015373\|Ga0132257_102402661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	684	Open in IMG/M
3300015373\|Ga0132257_103498466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	571	Open in IMG/M
3300015374\|Ga0132255_105423154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300017792\|Ga0163161_10985757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	719	Open in IMG/M
3300018071\|Ga0184618_10342847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300018469\|Ga0190270_10931672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	889	Open in IMG/M
3300018469\|Ga0190270_12382359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300018482\|Ga0066669_10907276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	789	Open in IMG/M
3300019356\|Ga0173481_10066798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1288	Open in IMG/M
3300022906\|Ga0247766_1037471	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300023057\|Ga0247797_1066460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300023097\|Ga0247757_10282445	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300023265\|Ga0247780_1180286	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300023275\|Ga0247776_10117022	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300025903\|Ga0207680_11047220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300025910\|Ga0207684_10848355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	770	Open in IMG/M
3300025931\|Ga0207644_11708761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300025933\|Ga0207706_11563419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	536	Open in IMG/M
3300025961\|Ga0207712_11508790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300025972\|Ga0207668_10242510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1459	Open in IMG/M
3300025972\|Ga0207668_11068725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300026023\|Ga0207677_10326956	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300026088\|Ga0207641_11864910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300026095\|Ga0207676_12553226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300026121\|Ga0207683_10277312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1532	Open in IMG/M
3300026121\|Ga0207683_11775384	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300028768\|Ga0307280_10138961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	833	Open in IMG/M
3300031892\|Ga0310893_10377172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300031908\|Ga0310900_11633694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300031911\|Ga0307412_10971679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	749	Open in IMG/M
3300032005\|Ga0307411_11671339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300032075\|Ga0310890_10510008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	916	Open in IMG/M
3300034090\|Ga0326723_0332059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.86%
Host-Associated	Host-Associated	44.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.95%
Plants	Host-Associated → Plants	44.14%
Aquatic	Environmental → Aquatic	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.02%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.60%
Roots	Host-Associated → Plants → Roots	1.80%
Sediment	Environmental → Aquatic → Sediment	0.90%
Peat	Environmental → Terrestrial → Peat	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.91%
Loam	Environmental → Terrestrial → Soil → Loam	8.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.60%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.02%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.41%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.60%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022906	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L223-509R-6	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062590_1017172371	3300004157	Soil	HLGSGRRLFQAVAGSQSGPFARRETIRRLEDLARAELSRVQAARKLDAFRLEMVVRFLVGTFIGFMDWWMREENEHVPPEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0062590_1027926012	3300004157	Soil	FRHFGSGRRLFKAVASSQSGALARRETTQRLEDLARAELTRLHAGRKLDAFKLEVVVRFLVGTFIGFMDWWLRDENRQLSAEQVDQSFRSLVLPGVSNVLELEIAVPKSP*
Ga0062595_1005525742	3300004479	Soil	AVASSQSGALARRETTQRLEDLARAELTRLHAGRRLDAFKLEVVVRFLVGTFIGFMDWWLRDENRQLSAEQVDQSFRSLVLPGVSNVLELEIAVPKSP*
Ga0062591_1009853051	3300004643	Soil	PFARRETIRRLEDLARAELSRVQAARKLDAFRLEMVVRFLVGTFIGFMDWWMREENEHVPPEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0062591_1009916671	3300004643	Soil	ASSQSGALARRETTQRLEHLARAELSRLQVARKLDAFRVETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0062591_1015369892	3300004643	Soil	SQSGALARRETTQRLEDLARAELTRLHAGRKLDAFKLEVVVRFLVGTFIGFMDWWLRDENRQLSAEQVDQSFRSLVLPGVSNVLELEIAVPKSP*
Ga0066678_108835942	3300005181	Soil	DKDDLLMAILADLEVPGPDTSSWKPDDPAFGWTLELFRHFGSGKRLFKAVASSQSGALARLETTQRLERLAQAELSRLKAARRLDAFKLQTVVRFLVGTFIGFMDWWMRAENEHLPAEQVDHAFRSLVLPGVANVLELELELPKSL*
Ga0070690_1001521361	3300005330	Switchgrass Rhizosphere	AFGWTLALFRHFGSGKRLFKAVAGGQSGSLARRETTRRLEELVQAELLRLKVTRKLDAFRLQTVVRFLVGTFVGFMDWWMREENDHLPAEQVDHAFRALVLPGVANVLELKLDVPESL*
Ga0070670_1017218542	3300005331	Switchgrass Rhizosphere	GSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0070682_1015522571	3300005337	Corn Rhizosphere	HFGSGRRLFKAVAGSQSGALARRETTRRLEHLAGAELSRVGAGRKLDALRLEIVGRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPRAL*
Ga0070674_1016876581	3300005356	Miscanthus Rhizosphere	DDLLMAILADLEMPGLDPTSWKADDPAFGWTLALFRHFGSGKRLFKAVAGGQSGSLARGETTRRLEELTEAELSRIKATRKLDAFKLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVAKVLELELELPKSL*
Ga0070673_1008073523	3300005364	Switchgrass Rhizosphere	QSGSLARRETTRRLEELVQAELLRLKVTRKLDAFRLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVANVLELKLDVPESL*
Ga0070688_1004761722	3300005365	Switchgrass Rhizosphere	AFGWTLALFRHFGSGKRLFKAVAGGQSGSLARGETTRRLEELTEAELSRLKATRKLDAFKLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVAKVLELELELPKSL*
Ga0070705_1009835162	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	WQPDDPAFGWTLDLFRHFGSGKRLFKAVASGDSGALARRETTQRLEVLVRAELSRLKAARKLDAFRIETVTRFLVGTFIGFMDWWMREENEHLPAEVVDHAYRSLVLPGVANVLELDLELPKAL*
Ga0070708_1014098582	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FKAVASSQSGELARRETTQRLERLAHAELSRLQAGRKLDAFKLETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0066682_105653191	3300005450	Soil	YAHFIDKDDLLMAILADLEMPGLDPSSWKPDDPAFGWTLALFRHFGSVKRLFKAVASSQSGSVARRETTARLEKLAQAELSRLKAARKLDAFRLETIVRFVVGTFIGFMDWWMREENEHLPAEQVDHAYRSLVLPGLANVLELELELPKSL*
Ga0070678_1018273912	3300005456	Miscanthus Rhizosphere	LFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0070662_1002427823	3300005457	Corn Rhizosphere	KRLFKAVASSQSGALARRETTLRLEALARAELSRLRVARRLDPFQLETVVRFLVGTFIGFMDWWMREENEHLPAEGVDHAFRSLVLPGVANVLELDLELPTRL*
Ga0068867_1010605042	3300005459	Miscanthus Rhizosphere	LGSGKRLFKAVASSQSSALARADVIRRLEILAQAELSRLHAARKLDPFRLSMMTRFLCGTFIGFMDWWMREENDHLPAEQVDHAFRSLVLPGVASVLELDLELPKSL*
Ga0070697_1008480171	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ELFRHFGSGRRLFNAVASSQSGALARRETTQRLETLARAELSRLKAARRLDGFRLEMLVRFLVGTFIGFMDWWLRAENEHLPAEQVDHAFRSLVLPGVANALELEIELPTSL*
Ga0070693_1013150081	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMREENDNLPAEQVDHAFRTLALPGVAHVLELRLNLPKSL*
Ga0070665_1013587702	3300005548	Switchgrass Rhizosphere	FGWTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0070704_1019145482	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GQSGSLARGETTRRLEELTEAELSRLKATRRLDAFKLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVAKVLELELELPKSL*
Ga0066692_110198011	3300005555	Soil	GSGKRLFKAVASSQSGALARLETTQRLERLAQAELSRLKAARRLDAFKLQTVVRFLVGTFIGFMDWWMRAENEHLPAEQVDHAFRSLVLPGVANVLELELELPKSL*
Ga0066704_104503242	3300005557	Soil	DDPAFGWTLELFRHFGSGKRLFKAVASSQSGALARLETTQRLERLAQAELSRLKAARRLDAFKLQTVVRFLVGTFIGFMDWWMRAENEHLPAEQVDHAFRSLVLPGVANVLELELELPKSL*
Ga0068855_1018760723	3300005563	Corn Rhizosphere	FRHFGSGQRLFKAVASSQSSALARRETTRRLEDLARAELSRLQAGRKLDAFRLETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELEIDLPTSL*
Ga0070664_1003611591	3300005564	Corn Rhizosphere	LLMAILADLEMPGLDPGSWKPDDPAFGWTLALFRHFGSGKRLFRAVAGGQSGSLARRETTRRLEELVQAELLRLKVTRKLDAFRLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVANVLELTLDVPGSL*
Ga0068854_1006562772	3300005578	Corn Rhizosphere	LFKAVASSQSGALARQETTRQLEELARAELSRLKAAKKLDAFKVETVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRSLVLPGVASVLELDLELPKSL*
Ga0068854_1020896152	3300005578	Corn Rhizosphere	KAVASSQSGALARRETTLRLEALARAELSRLRVARRLDPFQLETVVRFLVGTFIGFMDWWMREENEHLPAEGVDHAFRSLVLPGVANVLELDLELPTRL*
Ga0066691_104761371	3300005586	Soil	FRHFGSGRRLFKAVAGSQSGALARRETTRRLEDLAGAELSRVGAGRKLDALRLEIVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPHAL*
Ga0068852_1020093342	3300005616	Corn Rhizosphere	GKRLFKAVASSQSGAMARQETTRQLEELARAELSRLKAAKKLDAFKVETVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRSLVLPGVASVLELDLELPKSL*
Ga0068851_110313522	3300005834	Corn Rhizosphere	KRLFKAVASSQSGALARRETTRRLEILAQGELSRLRAAQRLDSFQLETVVRFLVGTFMGFMDWWMREENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0068870_113720871	3300005840	Miscanthus Rhizosphere	QSSALARAETIRRLEVLAQAELSRLHAARKLDPFRLSMMTRFLCGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVAKVLELDLELPKSL*
Ga0066651_101180711	3300006031	Soil	PSSWKPDDPAFGWTLALFRHFGSVKRLFKAVASSQSGSVARRETTARLEKLAQAELSRLKAARKLDAFRLETIVRFVVGTFIGFMDWWMREENEHLPAEQVDHAYRSLVLPGLANVLELELELPKSL*
Ga0097621_1012805162	3300006237	Miscanthus Rhizosphere	LLMAILADLEMPGLDPGSWKPDDPAFGWTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0068871_1023155802	3300006358	Miscanthus Rhizosphere	LFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0074057_119695871	3300006605	Soil	HFGSGKRLFKAVAGGQSGSLARRETTRRLEELVQAELSRLKVTRKLDAFRLQTVVRFLVGTFIGFMDWWMREENDHLPADQVDHAFRALVLPGVANVLELELDVPESL*
Ga0074057_122017052	3300006605	Soil	LMAILADLEMPGLDTSTWKPDDPAFGWTLALFRHFGSGKRLFKAVASSQSGALARRETTRRLEILAQAELSRLRAAQRLDAFQLETVVRFLVGTFVGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELELALPESL*
Ga0075424_1015299492	3300006904	Populus Rhizosphere	DLLMSILADLDVPGPDTSSWTANDPAFGWTLDLFRHFGSGRRLFKAVASSQSGALARRETTQRLETLARAELSRLKAAQRLDGFRLELLVRFLVGTFIGFMDWWLRAENEHLPAEQVDHAFRSLVLPGVANALELEIELPTSL*
Ga0105251_103365401	3300009011	Switchgrass Rhizosphere	KRLFKAVAGGQSGSLARRETTRRLEELVQAELLRLKVTRKLDAFRLQTVVRFLVGTFVGFMDWWMREENGHLPASQVDHAFRSLVLPGVVNVLELELELPTSV*
Ga0105251_106009301	3300009011	Switchgrass Rhizosphere	LMAILADLEMPGLDPNTWKADDPAFGWTLALFRHFGSVKRLFKAVASSSLARRETIDRLEQLVRAELSRLNAARKVDEFQLQTIVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0066710_1011559351	3300009012	Grasslands Soil	KAVASSQSGALARRETTQRLEELVRAELSRLKVARKLDAFSVEAVVRFLVGTFMGFMDWWMREENEHLPAEQVDHAFRSLALPGVANVLDLELELPMSLRGP
Ga0066710_1036098012	3300009012	Grasslands Soil	FYAHFVDKDDLLMAILADLEVPGPDTSSWKPDDPAFGWTLELFRHFGSGKRLFKAVASSQSGALARLETTQRLERLAEAELSRLKAARRLDAFKLQTVVRFLVGTFIGFMDWWMRAENEHLPAEQVDHAFRSLVLPGVANVLELELELPKSL
Ga0105245_128144501	3300009098	Miscanthus Rhizosphere	LARRETTRRLEILAQAELSRLRAAQRLDSFQLETVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0111538_127741532	3300009156	Populus Rhizosphere	ILADLDMPAPDTTTWKPDDPAFGWTLGLFRHFGSGKRLFKAVASSQSGALARRETTQRLEHLARAELSRLQVARKLDAFRVETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0105241_116791501	3300009174	Corn Rhizosphere	FKAVASSSIARRETIQRLEQLARAELLRLQAARKLDAFRVETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPTAL*
Ga0105242_126515411	3300009176	Miscanthus Rhizosphere	TLALFLHFGSVRRLFKAVASSSIARRETIQRLEQLARAELLRLQAARKLDAFRVETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0105249_103001923	3300009553	Switchgrass Rhizosphere	AFGWTLALFRHFGSGKRLFKAVAGGQTGSLARGETTRRLEELTEAELSRLKATRKLDAFKLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVAKVLELELELPKSL*
Ga0151490_12516571	3300011107	Soil	STWKPDDPAFGWTLALFRHFGSGKRLFKAVASSQSGALARRETTRRLEILAQAELSRLRAAQRLDAFQLETVVRFLVGTFVGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELELALPESL*
Ga0105246_121521821	3300011119	Miscanthus Rhizosphere	RLFKAVAGGQSGSLARGETTRRLEELTEAELSRIKATRKLDAFKLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVAKVLELDLELPKSL*
Ga0137364_110850181	3300012198	Vadose Zone Soil	KAVASSQSGALARRETTQRLERLVQAELSRLQVARKLDAFKVETVVRFLVGTFIGFMDWWMREKNENLPAEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0137382_111827541	3300012200	Vadose Zone Soil	QMPGLDPTTWKPDDPAFGWTLALFRHFGSVKRLYAVVASGPLARRETTRRLEELARAELSRLNVARTLDPFQLETVVRFLVGTFIGFMDWWIREENEQLPAEEVDHAFRSLVLPGVANILGLDLELPTSL*
Ga0137367_103795362	3300012353	Vadose Zone Soil	ALFRHFGSVKRLFKAVASSSLARRETTHRLEQLAQAELSRLKAARRLDSFQLETIVRFLVGTFIGFMDWWMREENEHLPAEQVDHAYRSLVLPGLANVLGLELELPKSL*
Ga0157303_100077624	3300012896	Soil	ESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0157283_102639842	3300012907	Soil	DPAFGWTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL
Ga0157298_103559331	3300012913	Soil	EVWTVLDGADPASSREPLVLEMPGLDPGSWKPDDPAFGWTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0157310_102633432	3300012916	Soil	GPLARQETIRRLEDLARAELSRLEARRKLDAFRLETVVRFLVGTFVGFMDWWMRDENAHLPPELVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0137407_106231171	3300012930	Vadose Zone Soil	DTGSWKPDDPAFGWTLEWFRHFGSGKRLFKAVASSQSGALARRETTQKLEKLAQAELSRLKAARRLDAFKLQTVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELELELPKSL*
Ga0164303_106269991	3300012957	Soil	GSWKPDDPAFGWTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0164302_104567813	3300012961	Soil	FKAVAGGQSGSLARRETTRRLEELVQAELLRLKVTRKLDAFRLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALALPGVANVLELKLDVPESL*
Ga0164302_108677501	3300012961	Soil	DLEMPGLDPSSWKPDDPAFGWTLALFRHFGSVKRLFKAVASSQSGALARRETTRRLEILAQAELSRLRAAQRLDPFQLETVVRFLVGTFMGFMDWWMREENEHLPAEQVDHTFRSLVLPGVSNVLKLELELPASL*
Ga0164302_109590261	3300012961	Soil	AGSQSGGLARRETTDRLETLARAELSRLKAGRRLDAFRLELVVRFLVGTFIGFMDWWLREENDHLPPEQVDHAFRSLVLPGVARVLELELDLPSAL*
Ga0134087_103212941	3300012977	Grasslands Soil	IDKDDLLMAILADLEMPGLDPSSWKPDDPAFGWTLALFRHFGSVKRLFKAVASSQSGSVARRETTARLEKLAQAELSRLKAARKLDAFRLETIIRFVVGTFIGFMDWWMREENEHLPAEQVDHAYRSLVLPGLANVLELELELPKSL*
Ga0164309_101238091	3300012984	Soil	HFGSGRRLFKAVAGSQTGALARRETTRRLEDLARAELSRLQAARKLDAFRLETVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0164309_110062791	3300012984	Soil	LALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL*
Ga0164309_116277121	3300012984	Soil	FVDKDDLLMAIFADMEMPGLDPSTWKRDDPAFGWTLALFTHFGATKRLFKAVASSSPARRETTVRLEQLAQAELSRLNALRRLDAFQLQTVVRFLVGTFIGFMDWWMREENEHLPAEQVDRAFRSLVLPGVANVLELDLELPMSL*
Ga0164308_103469811	3300012985	Soil	PAFGWTLALFEHFGAIKRLFKAVASSSPARRETTERLEQLAQAELSRLNATRRLDAFQLQTVVRFLVGTFIGFMDWWMREENEHLPAEGVDHAFRALVLPGVAKVLELDLALPRSL*
Ga0164307_106550112	3300012987	Soil	ALARRETTRRLEELAGAELSRVGAGRKLDALRLEIVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELGLELPRAL*
Ga0164307_112098511	3300012987	Soil	AHFVDKDDLLMAIFADMEMPGLDPSTWKPDDPAFGWTLALFEHFGSVKRLFKAVASSSPARGETTERLEGLVNAELSRLNALRRLDAFQLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALALPGVANVLELKLDVPESL*
Ga0164306_102850562	3300012988	Soil	VDKDDLLMAILADLEMPGLDTSTWKPDDTAFGWTLALFRHFGSGKRLFKAVASSQSGALARRETTRRLDILAQAELSRLRAAQRLDSFQLETVVRFLVGTFMGFMDWWMREENEHLPAEQVDHTFRSLVLPGVSNVLKLELELPASL*
Ga0163162_134963771	3300013306	Switchgrass Rhizosphere	LADLEMPGLDTSTWKPDDTAFGWTLALFRHFGSGKRLFKAVASSQSGALARRETTRRLEILAQAELSRLRAAQRLDSFQLETVVRFLVGTFMGFMDWWMREENEHLPAEQVDHAFRSLVLPGVSNVLKLELELPESL*
Ga0157375_114321321	3300013308	Miscanthus Rhizosphere	SSQSSALARADVIRRLEILAQAELSRLHAARKLDPFRLSMMTRFLCGTFIGFMDWWMREENEHVPPEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0157375_118254462	3300013308	Miscanthus Rhizosphere	GSGKRLFKAVAGGQSGSLARRETTRRLEELVEAELWRLKVTRKLDAFRLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVANVLELRLDLPESL*
Ga0157377_115272331	3300014745	Miscanthus Rhizosphere	TSWKADDPAFGWTLALFRHFGSGKRLFKAVAGGQSGSLARGETTRRLEELTEAELSRLKATRKLDAFKLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVAKVLELELELPKSL*
Ga0157376_110962791	3300014969	Miscanthus Rhizosphere	FGWTLQLFRHFGSGRRLFKAVASSQTGALARRETTRRLEDLARAELSRLQAARKLDAFRLEMVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPTAL*
Ga0173483_105222661	3300015077	Soil	SGWTEDDPAFGWTLELFRHLGSGKRLFRAVASSQSSALARAETIRRLEVLAQAELSRLHAARKLDPFRLSMMTRFLCGTFIGFMDWWMREENDHLPAEQVDHAFRALVLPGVAKVLELELELPKSL*
Ga0132257_1006512081	3300015373	Arabidopsis Rhizosphere	LFRHFGSGKRLVKAVASSQSSALARRETTRRLEDLARAELSRLQAARKLDPFRLETVVRFLVGTFIGFMDWWMREENEHLPPEQVDRAFRSLVLPGVANVLELDLELPTSL*
Ga0132257_1008721961	3300015373	Arabidopsis Rhizosphere	PAIAAIADAERMLGHALTATQRLERLTQAELSRLQVARKLDAFKLETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0132257_1024026612	3300015373	Arabidopsis Rhizosphere	KRLFKAVASSQSGAIARRETTSRLEDLVKAELSRLKAARRLDAFRVETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPTAL*
Ga0132257_1034984661	3300015373	Arabidopsis Rhizosphere	AAFGWTLALFRHFGSGKRLFKAVASSQSGALARRETTLRLEALARAELSRLRVARRLDPFQLETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPKAL*
Ga0132255_1054231541	3300015374	Arabidopsis Rhizosphere	PGLDPTTWKADDPAFGWTLALFRHFGSVKRLFKAVASSSLARRETIDRLEQLVRAELSRLNAARKVDEFQLQTIVRFLVGTFIGFMDWWIRDENDHLAAEQVDHAFRALVLPGVANVLELELELPKSL*
Ga0163161_109857572	3300017792	Switchgrass Rhizosphere	FGWTLALFRHFGSGKRLFKAVASSQSGALARRETTRRLEILAQAELSRLRAAQRLDSFQLETVVRFLVGTFMGFMDWWMREENEHLPAEQVDHAFRSLVLPGVSNVLKLELELPESL
Ga0184618_103428471	3300018071	Groundwater Sediment	QFGAGKRLAKALTTSQSGALARRETTRWLEDLARAELSRLRAPRKLDPVKLETVVRFIVGTFIGFMDWWLREENENLPADAVDHAFRSLVLPGVANVLGLDIEIPAAL
Ga0190270_109316722	3300018469	Soil	WTLALFRHFGSGKRLFKAVASGQSGALARRETTQRLETLAHAELSRLNAGRKLDAFKVETVVRFLVGTFIGFMDWWMREGNEHLPAEQVDHAFRSLVLPGVSNVLELELELPKAL
Ga0190270_123823591	3300018469	Soil	PAFGWTLALFRHFGSGKRLFKAVASRQSGALARRETTARLETLARAELSRLDAARTLDPFRLETIVRFLVGTFIGFMDWWMREENEHLPAEEVDHAFRSLVLPGVANVLELELELPTSL
Ga0066669_109072761	3300018482	Grasslands Soil	VASSQSGSVARRETTERLEKLAQAEPSRLKAARKLDAFRLETIVRFVVGTFIGFMDWWMREENEHLPAEQVDHAYRSLVLPGLANVLELELELPKSL
Ga0173481_100667983	3300019356	Soil	DPAFAWTLQLFRHFGSGRRLFKAVASSQTGALARQETTRRLEDLARAELSRLKAARKLDAFRLETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPTAL
Ga0247766_10374713	3300022906	Plant Litter	AFGWTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL
Ga0247797_10664602	3300023057	Soil	PFKAVASSSIARRETIQRLEQLARAELLRLQAARKLDAFRVETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPKAL
Ga0247757_102824452	3300023097	Plant Litter	LADLEMPGLDPGSWKPDDPAFGWTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL
Ga0247780_11802861	3300023265	Plant Litter	FRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL
Ga0247776_101170221	3300023275	Plant Litter	WKPDDPAFGWTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL
Ga0207680_110472201	3300025903	Switchgrass Rhizosphere	LFKAVASSSPARRETTVRLEQLAQAELSRLNALRRLDAFQLQTVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRSLVLPGVASVLELDLELPKSL
Ga0207684_108483551	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QSGELARRETTQRLERLAHAELSRLQAGRKLDAFKLETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPKAL
Ga0207644_117087611	3300025931	Switchgrass Rhizosphere	TLALFRHFGSGKRLFKAVASSQSGALARRETTRRLEILAQAELSRLRAAQRLDSFQLETVVRFLVGTFMGFMDWWMREENEHLPAEQVDHAFRSLVLPGVSNVLKLELELPESL
Ga0207706_115634192	3300025933	Corn Rhizosphere	SGAMARQETTRQLEELARAELSRLKAAKKLDAFKVETVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRSLVLPGVASVLELDLELPKSL
Ga0207712_115087901	3300025961	Switchgrass Rhizosphere	YAHFLDKDDLLMAILADLEMPGLDPGSWKPDDPAFGWTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL
Ga0207668_102425101	3300025972	Switchgrass Rhizosphere	FRHFGSGKRLFKAVASSQSGAMARQETTRQLEELARAELSRLKAAKKLDAFKVETVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRSLVLPGVASVLELDLELPKSL
Ga0207668_110687251	3300025972	Switchgrass Rhizosphere	FRHLGSGKRLFRAVASSQSSALARAETIRRLEVLAQAELSRLHAARKLDPFRLSMMTRFLCGTFIGFMDWWMREENEHLPAEQVDHAFRSLVMPGVANVLGLDIETPRAL
Ga0207677_103269562	3300026023	Miscanthus Rhizosphere	MAILADLEMPGLDPSTWKPDDAAFGWTLALFRHFGSGKRLFKAVASSQSGALARRETTLRLEALARAELSRLRVARRLDPFQLETVVRFLVGTFIGFMDWWMREENEHLPAEGVDHAFRSLVLPGVANVLELDLELPTRL
Ga0207641_118649102	3300026088	Switchgrass Rhizosphere	AVAGSQSGPFARRETIRRLEDLARAELSRLQAARKLDAFRLEMVVRFLVGTFIGFMDWWIREENEHVPPEQVDHAFRSLVLPGVANVLELDLELPKAL
Ga0207676_125532262	3300026095	Switchgrass Rhizosphere	GSGKRLFRAVAGGQSGSLARRETTRRLEELVQAELLRLKVTRKLDAFRLQTVVRFLVGTFVGFMDWWMREENDHLPAEQVDHAFRALVLPGVANVLELKLDVPESL
Ga0207683_102773123	3300026121	Miscanthus Rhizosphere	VASSQSGALARRETTQRLEDLARAELTRLHAGRRLDAFKLEVVVRFLVGTFIGFMDWWLRDENRQLSAEQVDQSFRSLVLPGVSNVLELEIAVPK
Ga0207683_117753842	3300026121	Miscanthus Rhizosphere	WTLALFRHFGSGKRLFKAVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL
Ga0307280_101389612	3300028768	Soil	LQPHQIDEVVLDQVAGDESGSIARRETIRRLEELVEAELMRLKATRKLDAFQLQTVVRFLVGTFMGFMDWWMRDENDHLPAEDVDHAFRTLALPGVANVLELRLNLPKSL
Ga0310893_103771722	3300031892	Soil	FRHFGSGKRLFKAVASSQSGALARRETTQRLERLVQAELSRLQATRKLDAFKLQTVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELDLELPTAL
Ga0310900_116336941	3300031908	Soil	ILADLEMPGLDPSSWKADDPAFGWTLALFRHFGSVKRLFKAVASSSIARRETIQRLEQLARAELLRLQAARKLDAFKVETVVRFLVGTFIGFMDWWMREENEHVPPEQVDHAFRSLALPGVANVLELDLALPKAL
Ga0307412_109716792	3300031911	Rhizosphere	FSHFGSGKRLFRAVSSSRSGELARRETKRWLEELARAELNRLRLPQSVEPMTLETVVSFLVGTFLGFMDWWMRPEHEQLTPEQVDQAFRALVLPGVSRVLRLEIELPARVNVAAG
Ga0307411_116713391	3300032005	Rhizosphere	SGKRLFKAVASSQSGALARRETTQRLEDLARAELSRVKATRKLDAFRLETVVRFLVGTFIGFMDWWMREENEHLPAEQVDHAFRSLVLPGVANVLELELELPKAL
Ga0310890_105100082	3300032075	Soil	HFGSGKRLFKAVASSQSGAMARQETTRQLEELARAELSRLKAAKKLDAFKVETVVRFLVGTFIGFMDWWMREENDHLPAEQVDHAFRSLVLPGVASVLELDLELPKSL
Ga0326723_0332059_395_685	3300034090	Peat Soil	ASSQSGALARRETTRRLEDLARAELSRLQAARKLDAFKLETVVRFLVGTFIGFMDWWMREENEHLPAEVVDHAFRSLVLPGLANVLELDIELPKAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085831

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences