Metagenome / Metatranscriptome Family F085761

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085761
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	121 residues
Representative Sequence	MAGKADFTEDEWKDLQQGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHRESDSQLVRELSATHGTGFGLVASPKEVVEGTTNALGAAVAVLGAKAPDELEAYRSLVLDVA
Number of Associated Samples	99
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.43 %
% of genes near scaffold ends (potentially truncated)	70.27 %
% of genes from short scaffolds (< 2000 bps)	81.08 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.189 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.838 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.94.1.0: automated matches	d4nn3a_	4nn3	0.58184
c.94.1.0: automated matches	d4pfia_	4pfi	0.57269
c.94.1.0: automated matches	d2zzva_	2zzv	0.57047
c.94.1.0: automated matches	d4n8ga1	4n8g	0.56454
c.94.1.0: automated matches	d5i7ia_	5i7i	0.55627

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01435	Peptidase_M48	8.11
PF07883	Cupin_2	4.50
PF04879	Molybdop_Fe4S4	1.80
PF00892	EamA	1.80
PF11799	IMS_C	1.80
PF00082	Peptidase_S8	1.80
PF07732	Cu-oxidase_3	0.90
PF07690	MFS_1	0.90
PF08240	ADH_N	0.90
PF08241	Methyltransf_11	0.90
PF00069	Pkinase	0.90
PF13738	Pyr_redox_3	0.90
PF07987	DUF1775	0.90
PF14742	GDE_N_bis	0.90
PF00596	Aldolase_II	0.90
PF00027	cNMP_binding	0.90
PF00440	TetR_N	0.90
PF01979	Amidohydro_1	0.90
PF13783	DUF4177	0.90
PF11146	DUF2905	0.90
PF01557	FAA_hydrolase	0.90
PF00294	PfkB	0.90
PF07729	FCD	0.90
PF00106	adh_short	0.90
PF14520	HHH_5	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.60
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.90
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.90
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.90
COG4549	Uncharacterized conserved protein YcnI, contains cohesin/reeler-like domain	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.19 %
Unclassified	root	N/A	10.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.19 %
Unclassified	root	N/A	10.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.19 %
Unclassified	root	N/A	10.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.45 %
Unclassified	root	N/A	10.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.55 %
Unclassified	root	N/A	10.81 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.23 %
Unclassified	root	N/A	10.81 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	24.32 %
Unclassified	root	N/A	10.81 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.90 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.32 %
Unclassified	root	N/A	10.81 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.60 %
unclassified Nitriliruptorales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales	0.90 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.32 %
Unclassified	root	N/A	10.81 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	1.80 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.80 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.90 %
unclassified Intrasporangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.32 %
Unclassified	root	N/A	10.81 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	1.80 %
Intrasporangiaceae bacterium URHB0013	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae → Intrasporangiaceae bacterium URHB0013	0.90 %
Micromonospora lupini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	0.90 %
Micromonospora viridifaciens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora viridifaciens	0.90 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_10610_length_1215_cov_7.748971	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10565219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300000858\|JGI10213J12805_10395918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300001213\|JGIcombinedJ13530_108256053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300002547\|JGI24973J35851_1014260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1162	Open in IMG/M
3300002547\|JGI24973J35851_1031290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300004156\|Ga0062589_100385940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1130	Open in IMG/M
3300004643\|Ga0062591_100674118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300005169\|Ga0066810_10121825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae → Intrasporangiaceae bacterium URHB0013	598	Open in IMG/M
3300005331\|Ga0070670_101039861	Not Available	746	Open in IMG/M
3300005441\|Ga0070700_101040346	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005456\|Ga0070678_102004613	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005457\|Ga0070662_100712794	Not Available	849	Open in IMG/M
3300005466\|Ga0070685_10061433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2200	Open in IMG/M
3300005466\|Ga0070685_10383318	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005543\|Ga0070672_101254607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300005548\|Ga0070665_101114219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300005615\|Ga0070702_100398844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	983	Open in IMG/M
3300005615\|Ga0070702_100504272	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005618\|Ga0068864_101318781	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300005764\|Ga0066903_100005441	All Organisms → cellular organisms → Bacteria	11053	Open in IMG/M
3300006358\|Ga0068871_101284911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300006574\|Ga0074056_10898353	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006847\|Ga0075431_101777512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300006881\|Ga0068865_101409389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300009147\|Ga0114129_11809088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300009801\|Ga0105056_1040566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300009812\|Ga0105067_1022032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300009837\|Ga0105058_1078447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300010154\|Ga0127503_10926824	Not Available	508	Open in IMG/M
3300010360\|Ga0126372_10452175	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300010398\|Ga0126383_12291374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	626	Open in IMG/M
3300010400\|Ga0134122_13088269	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300010403\|Ga0134123_10095041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2358	Open in IMG/M
3300011993\|Ga0120182_1019128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300012045\|Ga0136623_10110775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1196	Open in IMG/M
3300012045\|Ga0136623_10315774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300012092\|Ga0136621_1001192	All Organisms → cellular organisms → Bacteria	10562	Open in IMG/M
3300012093\|Ga0136632_10009181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4113	Open in IMG/M
3300012212\|Ga0150985_109305357	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012530\|Ga0136635_10165446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300012678\|Ga0136615_10010288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	4809	Open in IMG/M
3300012903\|Ga0157289_10220165	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012916\|Ga0157310_10288816	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300012958\|Ga0164299_10913589	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300012971\|Ga0126369_10362958	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300012985\|Ga0164308_12042124	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012988\|Ga0164306_10590677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300013308\|Ga0157375_10896796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1031	Open in IMG/M
3300013308\|Ga0157375_11978844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora viridifaciens	692	Open in IMG/M
3300015200\|Ga0173480_10574986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300015374\|Ga0132255_103468228	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300018051\|Ga0184620_10288477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300018072\|Ga0184635_10005722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4048	Open in IMG/M
3300018072\|Ga0184635_10158036	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300018073\|Ga0184624_10179703	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300018075\|Ga0184632_10001608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9269	Open in IMG/M
3300018422\|Ga0190265_10013036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6347	Open in IMG/M
3300018432\|Ga0190275_13546695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300018481\|Ga0190271_12886304	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300019259\|Ga0184646_1630444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300019263\|Ga0184647_1082543	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300020020\|Ga0193738_1150328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300021082\|Ga0210380_10047174	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300022899\|Ga0247795_1091071	Not Available	539	Open in IMG/M
3300025899\|Ga0207642_10318344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	908	Open in IMG/M
3300025931\|Ga0207644_10808911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300025933\|Ga0207706_10432873	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300025934\|Ga0207686_10981993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300025935\|Ga0207709_11387598	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300025940\|Ga0207691_10874918	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300025941\|Ga0207711_11010499	Not Available	771	Open in IMG/M
3300025981\|Ga0207640_10774146	Not Available	829	Open in IMG/M
3300026121\|Ga0207683_10586369	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300027006\|Ga0209896_1034177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300027277\|Ga0209846_1043459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300027577\|Ga0209874_1014463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	2289	Open in IMG/M
3300027638\|Ga0208612_1000286	All Organisms → cellular organisms → Bacteria	24351	Open in IMG/M
3300027638\|Ga0208612_1006124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4489	Open in IMG/M
3300027897\|Ga0209254_10486156	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300028708\|Ga0307295_10211052	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300028770\|Ga0302258_1174973	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300028771\|Ga0307320_10222236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300028875\|Ga0307289_10180009	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300028878\|Ga0307278_10227164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300028889\|Ga0247827_11044982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300030002\|Ga0311350_11154849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300030006\|Ga0299907_10202410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1638	Open in IMG/M
3300030336\|Ga0247826_10084604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	1918	Open in IMG/M
3300031081\|Ga0308185_1020343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300031170\|Ga0307498_10270981	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031424\|Ga0308179_1013299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300031772\|Ga0315288_11010588	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031834\|Ga0315290_10307251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1389	Open in IMG/M
3300031997\|Ga0315278_10191009	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300032143\|Ga0315292_10982512	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300032173\|Ga0315268_10998268	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300032177\|Ga0315276_10827427	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300032256\|Ga0315271_10411467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1135	Open in IMG/M
3300032256\|Ga0315271_11173276	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300032397\|Ga0315287_10149104	All Organisms → cellular organisms → Bacteria	2702	Open in IMG/M
3300032397\|Ga0315287_10874363	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300032397\|Ga0315287_11172237	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300032397\|Ga0315287_12101028	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300033233\|Ga0334722_10014652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6979	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.48%
Host-Associated	Host-Associated	22.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	46.85%
Aquatic	Environmental → Aquatic	30.63%
Plants	Host-Associated → Plants	22.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.14%
Freshwater	Environmental → Aquatic → Freshwater	25.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.11%
Sediment	Environmental → Aquatic → Sediment	4.50%
Peat	Environmental → Terrestrial → Peat	2.70%
Marine	Environmental → Aquatic → Marine	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.53%
Lake	Environmental → Aquatic → Freshwater → Lake	11.71%
Ice	Environmental → Aquatic → Freshwater → Ice	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.21%
Loam	Environmental → Terrestrial → Soil → Loam	6.31%
Sand	Environmental → Terrestrial → Soil → Sand	6.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	11.71%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.21%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.90%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.22%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	11.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.31%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	5.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.50%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.70%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.90%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.90%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002547	Polar desert microbial communities from Antarctic Dry Valleys - UQ889	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011993	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep1	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01079350	2140918013	Soil	MAGKADFTEDEWNDLQQGVTGAGLLVSSAHRDFTDSFGEAKAVASHLAAHRSSESELVRDLAGTHSTGFGLVASPKEVEGAISSLSSSVALLEARAPDEVD
ICChiseqgaiiFebDRAFT_105652191	3300000363	Soil	VSAAHRDFTDSFGEASSIAKQLAAHRQSESQLIRDLSSTHGTGFGLIASPDEVTEGTIKALDGAVAVLHEKAPDELEAYRQLVLDVATATAEAKGGVRDEETAAIERIKRALGGSTETSAGNE*
INPhiseqgaiiFebDRAFT_1052519711	3300000364	Soil	MAGKTEFTEDEWKNLQQGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHRESDSQLVRELSGTHGTGFGLVASPKEVVEGTMSALGAAVAVLGAKAP
JGI10213J12805_103959181	3300000858	Soil	MAGKADFTEDEWNELQQGVTGAGLLVSTAHRDFTDSFGEASTVAKQLAAHRESESQLVRELSGTRSTGFGLVASPKEVSEGTINALGAAVAVLGEKAPDELEAYRGLVLDVATAVAAAKGGVRDE
JGIcombinedJ13530_1082560532	3300001213	Wetland	MAGKADFTEDEWKDLQQGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHRESDSQLVRELSATHGTGFGLVASPKEVVEGTTNALGAAVAVLGAKAPDELEAYRSLVLDVA
JGI24973J35851_10142602	3300002547	Polar Desert	MAGKADFTEDEWKELQQGVTGAGMLVSTAHRDFTDAFGEASAVAKQLAVHRENESQLVRELSETRGTGFGLIASPKEVVEGTISALGTAVAVLGDKAPEELESYRRLVLDVATAVAEAKGGVKDEETAAIERI
JGI24973J35851_10312901	3300002547	Polar Desert	MAGKADFTEDEWKELQQGVTGSGMLVSAAHRDFTDAFGEASTVAKQLAAHRESESQLVRELSGTRGTGFGLVASPKEVVEGTMNALGAGVAVLGEKAPEELEAYRGLVLDVATAVAEAKGGVKDEEKAAIERITAALGGV*
Ga0062589_1003859403	3300004156	Soil	GVTGAGMLVSAAHRDFTDSFGEASSIAKQLAAHRQSESQLIRDLSSTHGTGFGLIASPDEVTEGTIKALDGAVAVLHEKAPDELEAYRQLVLDVATATAEAKGGVRDEETAAIERIKRALGGSTETSAGNE*
Ga0062591_1006741181	3300004643	Soil	GVTGAGMLVSAAHRDFTDSFGEASSIAKQLAAHRKSESQLIRDLSSTHGTGFGLIASPDEVTEGTIKALDGAVAVLHEKAPDELEAYRHLVLDVATATAEAKGGVRDEETAAIERIERALGGSTETSAGDQ*
Ga0066810_101218251	3300005169	Soil	MAGKTDFTEDEWKNLQQGVTGAGLLVSPAHRDFTDSFGEASAVAKQLAAHRESDSQLVRELSGTHSTGFGLVASPKEVVEGTVNALGAAVAVLAAKAPDELDAYRRLVLDVAT
Ga0070670_1010398612	3300005331	Switchgrass Rhizosphere	MAGKADFTEDEWKELQQGVTGAGLLVSSAHRDFTDSFGEAKAVASHLAAHRSSESELVRELAGTHSTGFGLVASPKEVEGVLGSLSSSVAVLEAKAPDEVGAYRELVLDVA
Ga0070700_1010403461	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VAAKTDFTEDEWKELQQGVTGAGLLVSTAHRDFTDSFSEAKAVATQLAAHRDSQSELVRDLSGTHGTGFGLVASPKEVVERTMSGLSASVALLTEKAPDELEAYRALVLDVANA
Ga0070678_1020046131	3300005456	Miscanthus Rhizosphere	MAGKADFTEDEWDALQKGVTGAGMLVSVAHRDFTDSFGEAKAIAKDLAANRENASQLIRELAETHGTGFGLVASPTEVNEGTMTALATAVATLTAKAPDELEAYKAFVLEVAHAVA
Ga0070662_1007127941	3300005457	Corn Rhizosphere	MAGKADFTEDEWKELQQGVTGAGLLVSSAHRDFTDSFGEAKAVASHLAAHRSSESELVRELAGTHSTGFGLVASPKEVEGVLGSLSSSVAVLAAKAPDEVEAYRELVLDVATAA
Ga0070685_100614335	3300005466	Switchgrass Rhizosphere	MAGKADFTEDEWKELQQGVTGAGLLVSSAHRDFTDSFGEAKAVASHLAAHRSSESELVRELAGTHSTGFGLVASPKEVEGVLGSLSSSVAVLEAKAPDEVEAYRELVLDVATAAA
Ga0070685_103833181	3300005466	Switchgrass Rhizosphere	MAGKADFTEDEWKGLQQGVTGAGMLVSTSHRDFTDSFGEAKAVAKQLQAHRASDSQLVRDLSGTHGTGFGLVASPSEVMEGTMSALHASVTLLAAKAPDELEAYRALVLDVANAVAEAKGGVKD
Ga0070672_1012546072	3300005543	Miscanthus Rhizosphere	MAGKADFTEDEWDALQKGVTGAGMLVSVAHRDFTDSFGEAKAIAKDLAANRENASQLIRELAETHGTGFGLVASPTEVNEGTMTALATAVATLTAKAPDELE
Ga0070696_1019519851	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MAGKADFTDEEWKELQQGVTGAGLLVSTAHRDFTDSFGEANALAKYLAEQHAKGETALVRELAHTHGTGFGLTSSPREVEQGTLEALGGAIEILSAKAPDELDAY
Ga0070665_1011142192	3300005548	Switchgrass Rhizosphere	MAGKADFTEDEWKELQQGVTGAGLLVSAAHRDFTDSFGEAKAVAKDLAAHRQSESELVRALAETHSTGFGLVASPTEVEGVLGSLGSAVAMLEAKAPDEVEPYRAFVLDIATAAAEAKGG
Ga0070702_1003988441	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VAAKTDFTEDEWKELQQGVTGAGLLVSTAHRDFTDSFSEAKAVATQLAAHRDSQSELVRDLSGTHGTGFGLVASPKEVVERTMSGLSASVALLTEKAPDELEAYRALVLDVANAVAEAKGGVQDEET
Ga0070702_1005042721	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MAGKADFTEDEWKELQQGVTGAGMLVSTSHRDFTDSFGEAKAVAKQLQAHRASDSQLVRDLSGTHGTGFGLVASPSEVMEGTMSALHASVALLAAKAPDELEAYRGLVLDVA
Ga0068864_1013187811	3300005618	Switchgrass Rhizosphere	MAGKSDFTSDEWEALQRGVVGAGMLVSTAHPGFTEGFGEAKAIASDLGKHRDSQSELVRELASQHGTGFGVVASPKEVAGTIDALAGAVATLTQKAPDEVEPYRSLVLDVANAAAEAKGGVA
Ga0068866_111408831	3300005718	Miscanthus Rhizosphere	MAGKADFTEDEWKGLQQGVTGAGMLVSTSHRDFTDSFGEAKAVAKQLQAHRASDSQLVRDLSGTHGTGFGLVASPSEVMEGTMSALHASVTLLAAKAPG
Ga0066903_1000054419	3300005764	Tropical Forest Soil	MAGKADFTDEEWNALQRGVTGSGMLVSAAHRDFTDSFGEAKAIAQHLAAHRDNESQLVRELSSTHGSGFGLVASPKEVSEGTMAALGTAVRILGEKAPAELDPYRRLVLDVANAAAEAKGGVTEEETAAIELIETALGPAPGA*
Ga0068871_1012849112	3300006358	Miscanthus Rhizosphere	MLVSTSHRDFTDSFGEAKAVAKQLQAHRASDSQLVRDLSGTHGTGFGLVASPSEVIEGTMSALHASVALLAAQAPDELEAYRALVLDVANAVAEAKGGVKDEERAAIQKVSDALG
Ga0074056_108983531	3300006574	Soil	MAGKTDFTEDEWKNLQQGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHRESDSQLVRELSGTHSTGFGLVASPKEVVEGTVNALGAAVAVLAAKAPDEL
Ga0075431_1017775121	3300006847	Populus Rhizosphere	LLVSAAHRDFTDSFGEASTVAKQLAAHRESDSELVRELSGTHGTGFGLVASPKEVVEGTMSALGAAVTVLGAKAPDELDAYRGLVLDVATAVAEAKGGVKDEETAAIGRITEALGVA*
Ga0068865_1014093892	3300006881	Miscanthus Rhizosphere	MAGKADFTEDEWKELQQGVTGAGLLVSAAHRDFTDSFGEAKAVAKDLAAHRQSESELVRALAETHSTGFGLVASPTEVEGALGSLGSAVAMLEAKAPDEV
Ga0114129_118090881	3300009147	Populus Rhizosphere	QGVTGSGLLVSTAHRDFTDSFGEASSIAKQLAAHRDSESELVRDLSSTRGTGFGLIASPNKVVEGTIKALGGAVTALEQKAPDELEAYRDLVLDVVSAVAEAKGGIRDEETAAIERIKSALGASDATSGEQ*
Ga0105056_10405662	3300009801	Groundwater Sand	MAGKADFTEGEWEGLQRGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTINALGAAVAVLGEKSPDELEAYRGLVLDVATAVAEAKGGVMDEEKAAIDRITAALGA
Ga0105073_10239501	3300009802	Groundwater Sand	MAGKADFTEGEWEGLQRGVTGAGLLVSAAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTITALGASVAVLGEKAP
Ga0105067_10220323	3300009812	Groundwater Sand	MAGKADFTEGEWEGLQRGVTGAGLLVSAAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVADGTINALGASVAVLGAKAPDELEAYRGLVLDVASAVAAAKGGVRDEETAAI
Ga0105058_10784471	3300009837	Groundwater Sand	MAGKADFTEGEWEGLQRGVTGAGLLVSAAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTINALGAAVAVLGEKSPDELEAYRGLVLDVATAVAAAKGGVKDEEKAAIDRITTALGAV*
Ga0127503_109268242	3300010154	Soil	MAGKADFTEVEWDALQKGVTGAGMLVSVAHRDFTDSFGEAKAIAKQLAAHSESDSQLVRELSKAHGTGFGLVASPTEVEQGTTAALATAMTTLAAKAPDDVEPYRALVLEVANAVA
Ga0126372_104521752	3300010360	Tropical Forest Soil	MAGKADFTDEEWNALQRGVTGSGMLVSAADRDFTDSFGEAKAIAQHLAAHRDSESQLVRELSSTHGSGFGLVASPKEVSEGTMAALGIAVGVLGEKAPEELDPYRTLVLDVANAAAEAKGGVTEEETAAIELIETALGPAPGA*
Ga0126383_122913741	3300010398	Tropical Forest Soil	PTHIAAEGREEMAGKADFTDEEWNALQRGVTGSGMLVSAAHRDFTDSFGEAKAIAQHLAAHRDNESQLVRELSSTHGSGFGLVASPKEVSEGTMAALGTAVRILGEKAPAELDPYRRLVLDVANAAAEAKGGVTEEETAAIELIETALGPAPGA*
Ga0134122_130882691	3300010400	Terrestrial Soil	MAGKADFTEDEWKGLQQGVTGAGMLVSTSHHDFTDSFGEAKAVAKQLQAHRASDSQLVRDLSGTHGTGFGLVASPSEVMEGTMSALHASVTLLAAKAPDELEAYRALVLDVANAVAEAKGGV*
Ga0134123_100950415	3300010403	Terrestrial Soil	MAGKADFTEDEWKELQQGVTGAGLLVSSAHRNFTDSFGEAKAVASHLAAHRSSESELVRELAGTHSTGFGLVASPKEVEGVLGSLSSSVAVLEAKAPDEVEAYRELVLDV
Ga0120182_10191281	3300011993	Terrestrial	MAGKSDFTDDEWKDLQQGVTGAGLLVSTAHRDFTDSFGEASTVAKQLTAHRESESQLVRELSGTHGTGFGLVASPKEVVEGTITALGAAVAVLGAKAPDELEAYRKLVLDVATAGAEAEGGG
Ga0136623_101107752	3300012045	Polar Desert Sand	MAGKADFTEDEWKELQQGVTGAGMLVSTAHRDFTDAFGEASAVAKQLAVHRENESQLVRELSETRGTGFGLIASPKEVVEGTISALGTAVAVLGDKAPEELESYRRLVLDVATAVAEAKGGVKDEETAAIERITAALGEPSDG*
Ga0136623_103157741	3300012045	Polar Desert Sand	MAGKADFTEDEWKELQQGVTGSGMLVSAAHRDFTDAFGEASTVAKQLAAHRESESQLVRELSGTRGTGFGLVASPKEVVEGTMNALGAAVAVLGEKAPEELEAYRGLVLDVATAVAEAKGGVKDEEKAAIERITAALGGV*
Ga0136621_10011927	3300012092	Polar Desert Sand	MAGKADFTEDEWKELQQGVTGSGMLVSAAHRDFTDAFGEASTVAKQFAAHRESESQLVRELSGTRGTGFGLVASPKEVVEGTMNALGAGVAVLGEKAPEELEAYRGLVLDVATAVAEAKGGVKDEEKAAIERITAALGGV*
Ga0136632_100091812	3300012093	Polar Desert Sand	MAGKADFTEDEWKELQQGVTGSGMLVSAAHRDFTDAFGEASTVAKQLAAHRESESQLVRELSGTRGTGFGLVASPKEVVEGTMNALGAAVAVLGEKAPEELEAYRVSCSTSRLRWRRPRAG*
Ga0150985_1093053571	3300012212	Avena Fatua Rhizosphere	MAGKADFTEEEWDALQKGVTGSGMLVSVAHRDFTDSFGEAKAIAKDLAANRQNASQLIRELAETHGTGFGLVASPTEVTEGTVAALSTAVATLTAKAPDELDAY
Ga0136635_101654462	3300012530	Polar Desert Sand	MAGKADFTEDEWKELQQGVTGSGMLVSAAHRDFTDAFGEASTVAKQLAAHRESESQLVRELSGTRGTGFGLVASPKEVVEGTMNALGAAVAVLGEKAPEELEAYRGLVLDVATAVAEAKGGVKDEE
Ga0136615_100102882	3300012678	Polar Desert Sand	MAGKADFTEDEWKELQQGVTGSGMLVSAAHRDFTDAFGEASTVAKQLAAHRESESQLVRELSGTRGTGFGLVASPKEVVEGTMNALGAAVAVLGEKAPEELEAYRGLVFDVATAVAEAKGGVQDEEQAAIERITAALG*
Ga0157289_102201651	3300012903	Soil	MAGKADFTEEEWDALQKGVTGSGMLVSVADRDFTDSFGEAKAIAKDLAANRENASQLVRELAETHGTGFGLVASPNEVNEGTMAALATSVATLTAKAPDE
Ga0157310_102888162	3300012916	Soil	MAGKADFTEEEWDALQKGVTGSGMLVSVAHRDFTDSFGEAKAIAKDLGANRENTSQLVRELAETYGTGFGLVASPTEVNEGTMAALATAVATLTAKAPDELDAYK
Ga0164299_109135891	3300012958	Soil	MAGKTDFTEDEWKNLQQGVTGAGLLVSTAHRDFTDSFGEASSIAKQLAQHRESDSQLVRELSGTHGTGFGLVASPKEVVEETMNALGAAVTVLGAKAPDELDAYRGLVLDVA
Ga0126369_103629581	3300012971	Tropical Forest Soil	MAGKADFTDEEWNALQRGVTGSGMLVSAAHRDFTDSFGEAKAIAQHLAAHRDSESQLVRELSSTHGSGFGLVASPKEVSEGTMAALGTAVRILGEKAPAELDPYRRLVLDVANAAAEAKGGVTEEETAAIELIETALGPAPGA*
Ga0164308_120421242	3300012985	Soil	MAGKADFTEDEWDALQKGVTGSGMLVSVSHRDFTESFGEAKAIAKDLAANRENASQLVRELAETHGTGFGLVASPTEVNEGTMTALATAVTTLTAKAPDELE
Ga0164306_105906771	3300012988	Soil	MAGKADFTEEEWDALQKGVTGSGMLVSVADRDFTDSFGEAKAIAKDLAANRENASQLVRELAETHGTGFGLVASTNEVNEGTMAALATSVATLTAKAPDDLEAYRAF
Ga0157375_108967962	3300013308	Miscanthus Rhizosphere	MAGKADFTEEEWDALQKGVTGSGMLVSVADRDFTDSFGEAKAIAKDLAANRENASQLVRELAETHGTGFGLVASPNEVNEGTMAALTTSVATLTAKAPDELEA
Ga0157375_117333942	3300013308	Miscanthus Rhizosphere	VAGKTDFTEDEWKNLQQGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHRESNSQLVRELSGTHGTGFGLVASPKEVVEGTMSALGDAVAVLGAKAPD
Ga0157375_119788441	3300013308	Miscanthus Rhizosphere	VAAKTDFTEDEWKELQQGVTGAGLLVSTAHRDFTDSFSEAKAVATQLAAHRDSQSELVRDLSGTHGTGFGLVASPKEVVERTMSGLSASVALLTEKAPDELEAYRALVLDVANAVAEAKGGVKDEERAAIQK
Ga0173480_105749862	3300015200	Soil	MAGKSDFTEDEWKNLQQGVTGAALLVSAAHRDFTDSFGEASSVAKQLAAHRESDSQLVRELSGTHGTGFGLVASPNEVAEGTMSALGAAVAVLGVKAPDELDAYRDLVLDVATAV
Ga0132255_1034682281	3300015374	Arabidopsis Rhizosphere	MAGKTDFTEDEWKNLQQGVTGAGLLVSTAHRDFTDSFGEASSIAKQLAQHRESDSQLVRELSGTHGTGFGLVASPKEVVEETMNALGAAVTVLGAKAPDELDAYRGLVLDVATA
Ga0184620_102884772	3300018051	Groundwater Sediment	MAAKTDFTEDEWKELQQGVTGAGLLVSTAHRDFTDSFGEAKAVASQLAAHRDSESELVRDLSGTHGTGFGLVASPKEVVEGTISALGASVTLLGEKAPDELGAYRALVLDVAKAVAEAKGGV
Ga0184635_100057225	3300018072	Groundwater Sediment	MAGKADFTEGEWEGLQRGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTINALGAAVAVLGEKSPDELEAYRGLVLDVATAVAAAKGGVKDEEKAAIDRITTALGAV
Ga0184635_101580361	3300018072	Groundwater Sediment	MAARTDFTEDEWKELQQGVTGAGLLVSTAHRDFTDSFGEAKAVASQLAAHRDSESELVRDLSGTHGTGFGLVASPKEVVEGTMSALSASVALLTQKAPDELEAYRALVLDVANAVAEAKGGVK
Ga0184624_101797031	3300018073	Groundwater Sediment	MAARTDFTEDEWKDLQQGVTGAGLLVSTAHRDFTDSFGEAKAVASQLAAHRDSESELVRDLSGTHGTGFGLVASPKEVVEGTMNALGASVALLTQKAPDELEAYRALVLDVANAV
Ga0184632_100016083	3300018075	Groundwater Sediment	MAGKADFTEGEWEGLQRGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTINALGAAVAVLGEKSPDELEAYRGLVLDVATAVAEAKGGVKDEEKAAIDRITTALGAV
Ga0190265_100130364	3300018422	Soil	MAGKADFTEDEWKELQQGITGAGLLVSTAHRDFTDTFGEASTVAKQLASHRESESQLVRELSGTHGTGFGLVATPKEVAEGTINALDAAAKVLGAKAPNELQAYRHLVLDVATAVAEAKGGVKDEEKAAIERITAALGAG
Ga0190275_135466951	3300018432	Soil	MAGKADFTEQEWEDLQQGVTGAGLLVSTAHRDFTDSFGEASSIANQLAAHRDSESELVRDLSSTRGTGFGLIASPKEVVEGTIEALGSAVAALEQKAPDELEPYRGFVLDVV
Ga0190271_128863041	3300018481	Soil	MAGKADFSKDEWEALQKGVMGSGMLVSVAHRDFTDGFGEASTLAKDLGAHRESESQLVRELAETHGTGFGAIASPKEVEEGTLGALATSVTLLSEKAPDELDAYRALVLDVANAVA
Ga0184646_16304441	3300019259	Groundwater Sediment	MAGKADFTEDEWKELQQGVTGAGMLVSTAHRDFTDSFGEASTVAKQLAAHRDNESQLVRELSGTRGTGFGVVASPKEVVEGTINALGAAVSVLGEKAPDELEAYRGLVLDVATAVAEAKGGVKDE
Ga0184647_10825431	3300019263	Groundwater Sediment	MAAKTDFTEDEWKELQQGVTGAGLLVSTAHRDFTDSFGEAKAVASQLAAHRDSESELVRDLSGTHGTGFGLVASPKEVVEGTMSALSASVALLTQKAPDELEAYRA
Ga0193738_11503281	3300020020	Soil	REWEDLQQGVTGAGLLVSTAHRDFTDSFGEASSIAKQLAAHRNSESELVRDLSSTRGTGFGLIASPDEVVEGTIKALGAAVAVLNQKAPDELEPYRDLVLDLVTAVAEAKGGVRDEETAAIERITSALGTAGEH
Ga0210380_100471744	3300021082	Groundwater Sediment	MAAKTDFTEDEWKELQQGVTGAGLLVSTAHRDFTDSFGEAKAVASQLAAHRDSESELVRDLSGTHGTGFGLVASPKEVVEGTMSALGASVALLTQKAPDELEAYRTLVLDVANAVAEAKGGVKEEESAAI
Ga0247795_10910712	3300022899	Soil	MAGKADFTDEEWKELEQGVTGAGLLVSTAHRDFTDSFGEAKAVAAELAAHRDSASELVRDLSGTHSTGFGLIASPKEVVEGTISSLGASVALLGEKAPDELEA
Ga0207642_103183443	3300025899	Miscanthus Rhizosphere	MAGKADFTEDEWKGLQQGVTGAGMLVSTSHRDFTDSFGEAKAVAKQLQAHRASDSQLVRDLSGTHGTGFGLVASPSEVMEGTMSALHASVTLLAAKAPGELEAY
Ga0207644_108089111	3300025931	Switchgrass Rhizosphere	MAGKADFTEEEWDALQKGVTGSGMLVSVAHRDFTDSFGEAKAIAKDLGANRENASQLVRELAEAHGTGFGLVASPTEVTDGTMAALATAVAALTAKAPDELEAYRAFVLE
Ga0207706_104328731	3300025933	Corn Rhizosphere	MAGKADFTEDEWKELQQGVTGAGLLVSSAHRDFTDSFGEAKAVASHLAAHRSSESELVRELAGTHSTGFGLVASPKEVEGVLGSLSSSVAVLAAKAPDEVEFCELPKTSTGKVKKYELRGQERG
Ga0207686_109819932	3300025934	Miscanthus Rhizosphere	MAGKADFTEEEWKELQQGVTGAGLLVSTAHRDFTDSFGEAKAVAAELAAHRDSASELVRDLSGTHSTGFGLVASPKEVVEGTISSLGASVALLGEKAPDELDAYRALVLDVATRVAEAK
Ga0207709_113875981	3300025935	Miscanthus Rhizosphere	MAGRAAFNEEEWDALQKGVTGSGMLVSVAHRDFTDSFGEAKAIAKDLAANRENTSQLVRELAETHGTGFGVVASPTEVNEGTMAALATAVATLTAKAPDELDAYRA
Ga0207691_108749182	3300025940	Miscanthus Rhizosphere	MAGKADFTEDEWDALQKGVTGAGMLVSVAHRDFTDSFGEAKAIAKDLAANRENASQLIRELAEAHGTGFGLVASPTEVNEGTMTALATAVATLTAKAPDELE
Ga0207711_110104991	3300025941	Switchgrass Rhizosphere	MAGKADFTEDEWKELQQGVTGAGLLVSSAHRDFTDSFGEAKAVASHLAAHRSSESELVRELAGTHSTGFGLVASPKEVEGVLGSLSSSVAVLEAKAPDEVEAYRELVLDVAR
Ga0207640_107741461	3300025981	Corn Rhizosphere	MAGKADFTEDEWKELQQGVTGAGLLVSSAHRDFTDSFGEAKAVASHLAAHRSSESELVRELAGTHSTGFGLVASPKEVEGVLGSLSSSVAVLEAKAPDEVEAYRELVLDVARAA
Ga0207683_105863693	3300026121	Miscanthus Rhizosphere	MAGKADFTEDEWKELQQGVTGAGMLVSTSHRDFTDSFGEAKAVAKLLQAHRASDSQLVRDLSGTHGTGFGLVASPSEVMEGTMSALHASVTLLAAKAPDELEAYRALVLDVAN
Ga0209896_10341771	3300027006	Groundwater Sand	MAGKADFTEGEWEGLQRGVTGAGLLVSAAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTINALGAAVAVLGEKSPDELEAYRGLVLDVATAVAA
Ga0209846_10434591	3300027277	Groundwater Sand	MAGKADFTEGEWEGLQRGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTITALGASVAVLGEKAPDELEAYRGLVLDVATAVAEAKG
Ga0209874_10144631	3300027577	Groundwater Sand	MAGKADFTEGEWEGLQRGVTGAGLLVSAAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTINALGAAVAVLGEKSPDELEAYRGLVLDVATAVAAAKGGVKDEEKAAIDRITTALGAV
Ga0208612_100028618	3300027638	Polar Desert	MAGKADFTEDEWKELQQGVTGAGMLVSTAHRDFTDAFGEASAVAKQLAVHRENESQLVRELSETRGTGFGLIASPKEVVEGTISALGTAVAVLGDKAPEELESYRRLVLDVATAVAEAKGGVKDEETAAIERITAALGEPSDG
Ga0208612_10061245	3300027638	Polar Desert	MAGKADFTEDEWKELQQGVTGSGMLVSAAHRDFTDAFGEASTVAKQLAAHRESESQLVRELSGTRGTGFGLVASPKEVVEGTMNALGAGVAVLGEKAPEELEAYRGLVLDVATAVAEAKGGVKDEEKAAIERITAALGGV
Ga0209254_104861561	3300027897	Freshwater Lake Sediment	MTGKADFSEDEWKALQKGVTGSGMFVSIADRDFTDSFGEANTIAKQLAAHRESESRLVRELSETHGTGFGMTASPQEIEEGTMSALASAVTALGEKAPEELEAYRRFVLDVAEAVAEAKGGIKEAETAAIEKIAVALGSA
Ga0307295_102110521	3300028708	Soil	MAARTDFTEDEWKDLQQGVTGAGLLVSTAHRDFTDSFGEAKAVATQLAAHRDSESELVRDLSGTHGTGFGLVASPKEVVEGTMNALGASVALLTQKAPDELEAYRAL
Ga0302258_11749731	3300028770	Fen	MAGKADFTEQEWSTLQKGVTGAGMLVSVAHRDFTDSFGEAKAIAQDLAKHRASDSALVRDLASAHGTGFGAFASPNEVEHGTLDALTAAVATLGQKAPDELEAYRALVLEVA
Ga0307320_102222362	3300028771	Soil	MAARTDFTEDEWKDLQQGVTGAGLLVSTAHRDFTDSFGEAKAVATQLAAHRDSESELVRDLSGTHGTGFGLVASPQEVVDGTISALGASVALLAQKAPDELE
Ga0307289_101800092	3300028875	Soil	MAGKADFSEDEWQGLQQGVTGAGLLVSTAHRDFTDSFGEAKAVAKELAAHRESESELVRDLSGAHGTGFGLVASPKEVVEGTISALGASVALLGQKAPDELEAYRALV
Ga0307278_102271642	3300028878	Soil	MAGKADFSEDEWKELQQGVTGAGLLVSTAHRDFTDSFGEAKAVAKELAAHRESESELVRDLSGAHGTGFGLVASPKEVVEGTISALGASVALLGQKAPDELEPYRALVLEVATAVAEAKGGVKEEESAAIERIRN
Ga0247827_110449821	3300028889	Soil	MAGKGDFTEGEWEGLQRGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTINALGAAVAVLGEKARDELEAYRGLVLDVATAVAEAKGGVKDEEKAAIDRITTALGA
Ga0311350_111548492	3300030002	Fen	MAGKADFTEQEWSSLQKGVTGAGMLVSVAHRDFTDSFGEAKAIASDLAAHRESESALVRDLASAHGTGFGAFASPNEVEHGTIDALTAAVSTLTEKAPDELEAYRAL
Ga0299907_102024102	3300030006	Soil	MAGKADFTEDEWKELQQGITGAGLLVSTAHRDFTDTFGEASTVAKQLASHRESDSQLVRELSGTHGTGFGLVATPKEVAEGTINALDAAAKMLGAKAPNELQAYRHLVLDVATAVAEAKGGVKDEEKAAIERITAALGAG
Ga0247826_100846043	3300030336	Soil	EGLQRGVTGAGLLVSTAHRDFTDSFGEASAVAKQLAAHREDESQLVRELSGTHGTGFGLVASPKEVVEGTINALGAAVAVLGEKARDELEAYRGLVLDVATAVAEAKGGVKDEEKAAIDRITTALGPV
Ga0311366_116951671	3300030943	Fen	MAGKADFTEEEWDALEKGVTGSGMLVSVAHRDFTDSFGEAKAIAKDLAANRENASQLVRELAEMHGTGFGLVASPKEVDEGTMASLAAAVAALTAKAP
Ga0308185_10203432	3300031081	Soil	MAAKTDFTEDEWKELQQGVTGAGLLVSTAHRDFTDSFGEAKAVATQLAAHRESGSELVRDLSGTHGTGFGLVASPKEVVEGTISALAASVALLAQKAPDELEAYRALVLDVANAVAEAKGGVK
Ga0307498_102709811	3300031170	Soil	MAGKADFTEDEWKNLQQGVAGAGLLVSAAHRDFTDSFAEASTIAKQLAAHRESESQLVRELSGTHGNGFGLVASPKEVGEGTMSALGAAVAVLGAKAP
Ga0308179_10132993	3300031424	Soil	MAARTDFTEDEWKDLQQGVTGAGLLVSTAHRDFTDSFGEAKAVATQLAAHRDSESELVRDLSGTHGTGFGLVASPKEVVEGTMNALGASVALLTQKAPDELEAYRALVLDVANAVAEAKGRVKEEESAAIE
Ga0315288_110105881	3300031772	Sediment	MAGKADFSKDEWEELQKGVTGAGMLVSVSHRDFTDSFGEASTLAKDLGAHRESESQLVRELAETHGTGFGFTASPNEVEEGTLGALAASVTLLTEKAPDELDAYRAFVL
Ga0315290_103072511	3300031834	Sediment	MTGKADFTEDEWEALQKGVTGAGMLVSVAHRDFTDSFGEASAIAKELAAHRESESQLVRELSETHGTGFGLVASPKEVGEGTITALEAAVTALGEKALDELEAYRRLVLEVANAVAEAKGGVKEEETAAIEKITAAMEAA
Ga0315278_101910092	3300031997	Sediment	MAGKADFTEDEWEALQKGVTGAGMLVSVAHRDFTDSFGEASAIAKELAAHRESESQLVRELSETHGTGFGLVASPKEVGEGTITALEAAVTALGEKALDELEAYRRLVLEVANAVAEAKGGVKEEETAAIEKITAAMEAA
Ga0315292_109825121	3300032143	Sediment	MAGKDDFSKDEWEELQKGVTGAGMLVSVSHRDFTDSFGEASTLAKDLGAHRGSESQLVRELAETHGTGFGFTASPNEVEEGTLGALAASVTLLTEKAPDELDAYRAFVLDVANAVAGAKGGVQPEETAAIEKITAALGDAG
Ga0315268_109982681	3300032173	Sediment	MAGKADFTEDEWEALQKGVTGAGMLVSVADRDFTDSFGEANALAKQLATHRENESQLVRDISATHGTGFGMTASPEEILEGTINALATAVETLGEKAPSELEAYRSLVLD
Ga0315276_108274271	3300032177	Sediment	MAGKDDFSKDEWEELQKGVTGAGMLVSVSHRDFTDSFGEASTLAKDLGAHRESESQLVRELAETHGTGFGFTASPNEVEEGTLGALAASVTLLTEKAPDELDAYRAFVLDVANAVAGAKGGVQPEETAAIEKITAALGDAG
Ga0315271_104114671	3300032256	Sediment	MAGKADFTEDEWDALQKGVTGAGMLVSVADRDFTDSFGEASALAKQLAAQRESESELVRDLSATHGTGFGMTASPEEILQGTIDALTSAVATLGEKAPDELEAYRGL
Ga0315271_111732762	3300032256	Sediment	MAGKDDFSKDEWEELQKGVTGAGMLVSVSHRDFTDGFGEASTLAKDLGAHRGSESQLVRELAETHGTGFGFTASPNEVEEGTLGALSASVTLLTEKAPDELDAYRAFVLDVANAVAGAKGGVQPEETAAIEKITAALGDAG
Ga0315287_101491042	3300032397	Sediment	MAGKADFSKDEWEELQKGVTGAGMLVSVSHRDFTDSFGEASTLAKDLGAHRESESQLVRELAETHGTGFGFTASPNEVEEGTLGALAASVTLLTEKAPDELDAYRAFVLDVANAVAGAKGGVQPEETAAIEKITAALGDAG
Ga0315287_108743632	3300032397	Sediment	MAQKSDFTEEEWKSLRKGVTGAGMLVSIGHKDFTDSFGEANAMAKQLVAERANASQLVRELTAEHGTGFGMFSSPKEVETETMASLQAAVVLLTDKAPDDLDAYRGLVLDVANAVAEAKGGVQ
Ga0315287_111722372	3300032397	Sediment	MAGKADFTKDEWEELEKGVTGAGMLVSVSHRDFTDSFGEASTLAKDLGAHRESESQLVRELAETHGTGFGLTASPNEVEEGTMSALAASVTLLSEKAPDELDAYRAFVLDVANAVAGAKGGVQPEETAAIEKVTTALGLS
Ga0315287_121010282	3300032397	Sediment	MAGKPDFTEDEWDALQKGVTGAGMLVSVADRDFTDSFGEASALAKQLAAHRESESELVRDLSTTHGTGFGMTASPEEILEGTINALTSAVGTLGEKAPDEL
Ga0334722_100146522	3300033233	Sediment	MAQKSDFTEEEWKSLRKGVTGAGMLVSIGHKDFTDSFGEANAMAKQLVAERANASQLVRELTAEHGTGFGMFNSPKEVETETMASLQAAVVLLTDKAPDDLDAYRGLVLDVANAVAEAKGGVQAEETAAIERITAALGVS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085761

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences