NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F085755

Metagenome / Metatranscriptome Family F085755

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085755
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 65 residues
Representative Sequence RFQARGNLIVKDTPFEIELEGRIRGQGQGKAGDERLLVDARGSFDWGTTTVEITAAVSAVKEA
Number of Associated Samples 100
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 91.89 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(30.631 % of family members)
Environment Ontology (ENVO) Unclassified
(43.243 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.748 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 56.04%    Coil/Unstructured: 43.96%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF03358FMN_red 75.68
PF00571CBS 11.71
PF11799IMS_C 8.11
PF00106adh_short 0.90
PF04961FTCD_C 0.90
PF06224HTH_42 0.90
PF01545Cation_efflux 0.90
PF04264YceI 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 0.90
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 0.90
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 0.90
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 0.90
COG3404Formiminotetrahydrofolate cyclodeaminaseAmino acid transport and metabolism [E] 0.90
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 0.90

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004156|Ga0062589_100654155All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300005294|Ga0065705_11121030All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300005330|Ga0070690_100231852All Organisms → cellular organisms → Bacteria1299Open in IMG/M
3300005334|Ga0068869_100661328All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300005336|Ga0070680_100141099All Organisms → cellular organisms → Bacteria2020Open in IMG/M
3300005337|Ga0070682_100198365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1414Open in IMG/M
3300005338|Ga0068868_100315802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1330Open in IMG/M
3300005341|Ga0070691_10080449All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300005439|Ga0070711_101498040All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005444|Ga0070694_100470130All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300005451|Ga0066681_10138906All Organisms → cellular organisms → Bacteria1421Open in IMG/M
3300005457|Ga0070662_100009080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6488Open in IMG/M
3300005471|Ga0070698_101037086All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300005549|Ga0070704_101873521All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005549|Ga0070704_102053340All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005553|Ga0066695_10734771All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300005576|Ga0066708_10428637All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300005614|Ga0068856_100967490All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300005764|Ga0066903_102744323All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300006031|Ga0066651_10698397All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300006032|Ga0066696_11020539All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300006046|Ga0066652_100189597All Organisms → cellular organisms → Bacteria1761Open in IMG/M
3300006046|Ga0066652_101500906All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300006358|Ga0068871_101965254All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300006578|Ga0074059_11646094All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300006852|Ga0075433_10413127All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300006854|Ga0075425_100422356All Organisms → cellular organisms → Bacteria1536Open in IMG/M
3300006854|Ga0075425_101236579All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300006904|Ga0075424_100258896All Organisms → cellular organisms → Bacteria1850Open in IMG/M
3300006904|Ga0075424_102419030All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300006914|Ga0075436_101384330All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300007076|Ga0075435_101741420All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300009093|Ga0105240_11466001All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300009137|Ga0066709_100623912All Organisms → cellular organisms → Bacteria1539Open in IMG/M
3300009162|Ga0075423_11866722All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300009553|Ga0105249_12183403All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300010335|Ga0134063_10214243All Organisms → cellular organisms → Bacteria → Proteobacteria909Open in IMG/M
3300010337|Ga0134062_10388383All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300010364|Ga0134066_10231670All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300010396|Ga0134126_11628475All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300010397|Ga0134124_12630521All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300010401|Ga0134121_11618598All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300011119|Ga0105246_11130407All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300012200|Ga0137382_11061019All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300012488|Ga0157343_1023563All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300012514|Ga0157330_1031336All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300012896|Ga0157303_10002950All Organisms → cellular organisms → Bacteria2284Open in IMG/M
3300012903|Ga0157289_10076295All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300012907|Ga0157283_10225837All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300012910|Ga0157308_10316872All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300012914|Ga0157297_10407727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300012955|Ga0164298_10693641All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300012960|Ga0164301_10920681All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300012989|Ga0164305_12063724All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300013102|Ga0157371_10183530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1497Open in IMG/M
3300013102|Ga0157371_10216519All Organisms → cellular organisms → Bacteria1375Open in IMG/M
3300013308|Ga0157375_10058972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3800Open in IMG/M
3300014497|Ga0182008_10360685All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300015373|Ga0132257_101652582All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300017944|Ga0187786_10599291All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300018027|Ga0184605_10281127All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300018028|Ga0184608_10397451All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300019882|Ga0193713_1143271All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300019996|Ga0193693_1041085All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300020006|Ga0193735_1125579All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300020022|Ga0193733_1090834All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300022756|Ga0222622_11336919All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300022901|Ga0247788_1133167All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300023071|Ga0247752_1035780All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300024178|Ga0247694_1001042All Organisms → cellular organisms → Bacteria → Proteobacteria5130Open in IMG/M
3300024179|Ga0247695_1003194All Organisms → cellular organisms → Bacteria2376Open in IMG/M
3300024246|Ga0247680_1019136All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300024287|Ga0247690_1019090All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300025906|Ga0207699_10369381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1016Open in IMG/M
3300025920|Ga0207649_10753141All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300025928|Ga0207700_10203593All Organisms → cellular organisms → Bacteria1669Open in IMG/M
3300025933|Ga0207706_10217055All Organisms → cellular organisms → Bacteria1676Open in IMG/M
3300025934|Ga0207686_11025335All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300025986|Ga0207658_11941144All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300026323|Ga0209472_1108233All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300028707|Ga0307291_1176474All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300028712|Ga0307285_10011219All Organisms → cellular organisms → Bacteria1934Open in IMG/M
3300028713|Ga0307303_10011484All Organisms → cellular organisms → Bacteria1587Open in IMG/M
3300028714|Ga0307309_10070153All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300028717|Ga0307298_10028294All Organisms → cellular organisms → Bacteria1480Open in IMG/M
3300028720|Ga0307317_10297281All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300028721|Ga0307315_10102073All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300028768|Ga0307280_10080426All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300028768|Ga0307280_10302754All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300028768|Ga0307280_10322685All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300028768|Ga0307280_10415584All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300028782|Ga0307306_10041219All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300028784|Ga0307282_10428999All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300028784|Ga0307282_10503463All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300028796|Ga0307287_10024007All Organisms → cellular organisms → Bacteria2141Open in IMG/M
3300028811|Ga0307292_10012696All Organisms → cellular organisms → Bacteria2885Open in IMG/M
3300028811|Ga0307292_10021852All Organisms → cellular organisms → Bacteria2259Open in IMG/M
3300028819|Ga0307296_10093150All Organisms → cellular organisms → Bacteria1612Open in IMG/M
3300028875|Ga0307289_10063098All Organisms → cellular organisms → Bacteria1490Open in IMG/M
3300028880|Ga0307300_10257255All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300030511|Ga0268241_10064551All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300030511|Ga0268241_10194825All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300031152|Ga0307501_10173955All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300031562|Ga0310886_10406827All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300031731|Ga0307405_10629901All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300031911|Ga0307412_12296263All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300031938|Ga0308175_100193203All Organisms → cellular organisms → Bacteria1997Open in IMG/M
3300031996|Ga0308176_10656943All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300032012|Ga0310902_10123777All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300032954|Ga0335083_10810769All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300034817|Ga0373948_0034218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1038Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil30.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.21%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.21%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.70%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.70%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.80%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.80%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.90%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.90%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.90%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.90%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012488Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610Host-AssociatedOpen in IMG/M
3300012514Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510EnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019996Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4EnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300024178Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35EnvironmentalOpen in IMG/M
3300024179Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36EnvironmentalOpen in IMG/M
3300024246Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21EnvironmentalOpen in IMG/M
3300024287Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062589_10065415523300004156SoilLDAAQDPEIRFETTAIEPLDAERFRARGNLIVKGSPYEVELEGRIRGQGQGKAGDERVLIDASGTFDWGSTAVEITAAVSAVKEA*
Ga0065705_1112103013300005294Switchgrass RhizosphereVEPLDAERFKARGNLTIKDTPFEIELEGRIRGQGQGKAGDERVLVDASGAFDWDTTTVEISAAVSAVKEA*
Ga0070690_10023185233300005330Switchgrass RhizosphereESTAVEPLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKVGDDRLLLDARGSFDWGTTTVEITAAVSAVKA*
Ga0068869_10066132833300005334Miscanthus RhizosphereDDAFRIRGELTIKETPFEVELDGRLRGVGTGQAGDERLLVDARGTFEWGTTAVEVTAAVSAAKEA*
Ga0070680_10014109943300005336Corn RhizosphereLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKAGDDRLLVDARGSFDWGTTTVEITAAVSAVKA*
Ga0070682_10019836543300005337Corn RhizosphereFLARGNLIVKATPFEVELEGRVRGHGQGKAGDERLLVDARGTFEWGSTSVEITAAVSAVKEA*
Ga0068868_10031580243300005338Miscanthus RhizosphereEPTGEDAFRIRGELTIKETPFEVELDGRLRGVGTGKAGDERLLVDARGTFEWGTTAVEVTAAVSAAKEA*
Ga0070691_1008044913300005341Corn, Switchgrass And Miscanthus RhizosphereRGNLIVKATPFEVELEGRVRGHGQGKAGDERLLVDARGTFEWGSTSVEITAAVSAVKEA*
Ga0070711_10149804023300005439Corn, Switchgrass And Miscanthus RhizosphereVKEHPFEVELEGTIRGRGQGKAGDDRLLLDARGSFDWGTTTVEITAAVSAVKA*
Ga0070694_10047013013300005444Corn, Switchgrass And Miscanthus RhizosphereEDAFRIRGELTIKETPFEVELDGRLRGVGTGKAGDERLLVDARGTFEWGTTAVEVTAAVSAAKEA*
Ga0066681_1013890643300005451SoilELTVKETPFELELDGRVRGVGTGKAGDERLVIDARGSFDWGTTTVDVTAAVSATKEA*
Ga0070662_10000908093300005457Corn RhizosphereKETPFEVELDGRLRGVGTGKAGDERLLVDARGTFEWGTTAVEVTAAVSAAKEA*
Ga0070698_10103708613300005471Corn, Switchgrass And Miscanthus RhizosphereDTPFEIELEGRIRGQGQGKAGDERVLVDARGAFDWGTATVEISAAVSAVKEA*
Ga0070704_10187352123300005549Corn, Switchgrass And Miscanthus RhizosphereTVKDTPFEIELEGRIRGQGQGKAGDERVLVDARGAFDWGTTTVEISAAVSAVKEA*
Ga0070704_10205334023300005549Corn, Switchgrass And Miscanthus RhizosphereDTPFEIELETRLRGVGRGKAGDERIVLDGRGSFEWGTTTVDLTVAVSAAREA*
Ga0066695_1073477123300005553SoilIKDTPFEIELDGHVRGAGTGKAGDERLVVDANGAFDWGTTTVQLTAAVSATKEA*
Ga0066708_1042863713300005576SoilEILFRSTTVEPTGDDSFRMRGELTVKDTPFEIELDGRIRGVGQGKAGDERLVIDARGAFEWGTTTVELTAAVSAVKEA*
Ga0068856_10096749033300005614Corn RhizosphereLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKAGDDRLLLDARGSFDWGTTTVEITAAVSAVKA*
Ga0066903_10274432313300005764Tropical Forest SoilRFESTAVEPLDERRFALRGNLFVKEQPFEVELGGTIRGRGQGKAGDDRLLLDARGSFDWGTTTVEITAAVSAVKA*
Ga0066651_1069839713300006031SoilILFRSTTVEPSGDDSFRIRGELTIKATPFEIELDGRVRGLGQGKAGDERLVVDARGAFEWGTTTVELTAAVSAVKEA*
Ga0066696_1102053913300006032SoilFRSTTVEPTGDDSFRIRGELTVKDTPFEIELDGRIRGVGQGKAGDERLVIDARGAFEWGTTTVELTAAVSAVKEA*
Ga0066652_10018959743300006046SoilTVEPTGDDSFRIRGELTVKDTPFEIELDGRIRGVGQGKAGDERLVIDARGAFEWGTTTVELTAAVSAVKEA*
Ga0066652_10150090613300006046SoilKHPEIRFETTAVEPLDAERFKARGNLTVKDTPFEIELEGRIRGQGRGKAGDERLLVDVRGSFDWGTTTVEITAAVSSAKEEA*
Ga0068871_10196525423300006358Miscanthus RhizosphereIRFESTAVEALDDERFTLRGNLFVKDTPFEVEFEGRVRGRGQGQAGDERIVIDARGAFDWAGTTVEITAAVSAAREA*
Ga0074059_1164609413300006578SoilERFRARGNLIVKDTPFEIELEGRIRGHGQGKAGDERLLVDARGAFDWGTTTVEITAAVSAVKEA*
Ga0075433_1041312713300006852Populus RhizospherePFEIELETRVRGAGQGKAGDERLVLDARGSFEWGTTNVELTVAVSATKEA*
Ga0075425_10042235613300006854Populus RhizosphereQPFEVELEGRIRGRGQGKAGDDRLLVDARGSFDWGTTTVEITAAVSAVKA*
Ga0075425_10123657923300006854Populus RhizosphereIHFASKSIEPIDRDRFLVRGDVTVKDTPFEVELEAHRRGLGQGKLGDERLLVDARGSFDWGTTKVELNISVSAARQA*
Ga0075424_10025889613300006904Populus RhizosphereVKEQPFEVELEGRIRGRGQGKAGDDRLLVDARGSFDWGTTTVEITAAVSAVKA*
Ga0075424_10241903023300006904Populus RhizosphereAVEPLDAERFKARGNLTVKDTPFEIELEGRIRGQGQGKAGDERVLVDVRGAFDWGTTTVEITAAVSAVKEA*
Ga0075436_10138433013300006914Populus RhizosphereTAIEPLDSERFLARGNLIVKGSPFEVELEGRVRGHGQGKAGDERVLIDARGAFAWGSTGVEVMAAVSAVKEA*
Ga0075435_10174142013300007076Populus RhizosphereRFESTAVELLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKAGDDRLLVDARGSFDWGTTTVEITAAVSAVKA*
Ga0105240_1146600123300009093Corn RhizosphereLDDERFTLRGNLFVKDTPFEVEFEGRVRGRGQGQAGDERIVIDARGAFDWAGTTVEITAAVSAAREA*
Ga0066709_10062391213300009137Grasslands SoilAAVPPPSDATFVVRREPTIKQTPFEVELQTRVRGTGRGKAGDERLVLDARGSFDWGTTTVELTAAVSTSKEV*
Ga0075423_1186672223300009162Populus RhizosphereAVDPVADDRFRVRGNLVIKNQPFEIELETRVRGTGLGQAGDQRLVLDGRGSFVWGTTTVELTAAVAATKET*
Ga0105249_1218340313300009553Switchgrass RhizosphereHPEIRFETTAVEPLDAEGFKARGNLIVKDTPFEIELEGRIRGQGQGKAGDERVLVDARGAFDWGTTTVEISAAVSAVKEA*
Ga0134063_1021424333300010335Grasslands SoilRGELTVKDTPFEIVLDGRVRGVGQGKAGDERLVIDARGAFEWGTTTVELTAAVSAVKEA*
Ga0134062_1038838313300010337Grasslands SoilIRFRSITVEPTGEDTFHVRGELTVKETPFELELDGRVRGVGTGKAGDERLVIDARGSFDWGTTTVDVTAAVSATKEA*
Ga0134066_1023167013300010364Grasslands SoilTAVESTGEDTFHVRGELTIKDTPFEIELDGHLRGVGTGKAGDQRLVVDASGAFDWGTTTVQLTAAVSATREA*
Ga0134126_1162847523300010396Terrestrial SoilETTAIEPLDAERFLARGNLIVKSTPFEVELEGRVRGHGQGKAGDERLLVDARGTFEWGSTSVEITAAVSAVKEA*
Ga0134124_1263052113300010397Terrestrial SoilLDAERFLARGNLIVKATPFEVELEGRVRGHGQGKAGDERLLVDARGTFEWGSTSVEITAAVSAVKEA*
Ga0134121_1161859813300010401Terrestrial SoilPEIRFESTAVEPLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKAGDDRLLVDARGSFDWGTTTVEITAAVSAVKA*
Ga0105246_1113040723300011119Miscanthus RhizosphereFEIELEGRIRGHGQGKAGDERLLVDARGTFDWGTTTVEITAAVSAVKDA*
Ga0137382_1106101913300012200Vadose Zone SoilPFEIELEGHVRGVGTGKAGDERLVVDANGAFDWGTTTVQLTAAVSATKEA*
Ga0157343_102356323300012488Arabidopsis RhizospherePEIRFESTAVEPLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKVGDDRLLLDARGSFDWGTTTVEITAAVSAVKA*
Ga0157330_103133623300012514SoilPFELELQGRLRGRGTGKGGDERIVLDVDGSFDWGTTTVEITAGVSATKQV*
Ga0157303_1000295013300012896SoilQPFEVELQGRLRGHGTGKQGDERLLLDVNGSFDWGTTTVEITAGVSATKQV*
Ga0157289_1007629513300012903SoilTTAVEPLDAERFHARGNLIVKDTPFEIELEGRVRGQGRGKAGDERVLVDVRGAFDWGTTTVEISAAVSAVKEA*
Ga0157283_1022583723300012907SoilVKDTPFEIELEGRIRGQGQGKAGDERVLVDVRGAFDWGTTTVEISAAVSAVKEA*
Ga0157308_1031687213300012910SoilRGNLFVKEQPFEIQLEGTIRGRGQGKAGDDRLLVDAHGSFDWGTTTVEITAAVSAVKA*
Ga0157297_1040772723300012914SoilELTIKDTPFEIQLDGRLRGVGTGKAGDERLLVDARGTFEWGTTTVEVTAAVSAAKEA*
Ga0164298_1069364123300012955SoilEIRFESTAVEALDDERFTLRGNLFVKDTPFEVEFEGRVRGRGQGQAGDERIVIDARGAFDWAGTTVEITAAVSAARDA*
Ga0164301_1092068113300012960SoilIELEGRIRGQGQGKMGDERLLVDARGAFDWGTTTVEITAAVSAVKEA*
Ga0164305_1206372413300012989SoilTAVEPLDAERFSARGNLFVKDTPFEVELEGRIRGRGQNQAGDDRIVIDASGAFDWGTMTVEITAAVSAVKAA*
Ga0157371_1018353043300013102Corn RhizosphereVEALDDERFTLRGNLFVKDTPFEVEFEGRVRGRGQGQAGDERIVIDARGAFDWAGTTVEITAAVSAAREA*
Ga0157371_1021651913300013102Corn RhizospherePEIRFETTAIEPLDAERFLARGNLIVKATPFEVELEGRVRGHGQGKAGDERLLVDARGTFEWGSTSVEITAAVSAVKEA*
Ga0157375_1005897213300013308Miscanthus RhizosphereKDTPFEIELEGRIRGHGQGKAGDERLLVDARGTFDWGTTTVEITAAVSAVKDA*
Ga0182008_1036068513300014497RhizosphereIRFESTAVEHLGEERFALRGNLFVKEQPFEVELEGKLRGRGRGKAGDDRLLLDAHGSFDWGTTTVEITAAVSAVKA*
Ga0132257_10165258213300015373Arabidopsis RhizosphereEPLGDDRFALRGQLFVKEQPFELELQGRLRGRGTGKGGDERIVLDVDGSFDWGTTTVEITAGVSATKQV*
Ga0187786_1059929113300017944Tropical PeatlandRFRSTGVEPIGDDRFRVRGELIVKDTPFEIELETRVRGLGQGQRGDERIVLDARGAFEWGTTTVELTVAVSAAKGA
Ga0184605_1028112723300018027Groundwater SedimentFTVRGDLVVKDTPFEVELEGRIRGHGQGKAGDDRLVLDVRGAFDWGTTTVEITGGVSASKDA
Ga0184608_1039745113300018028Groundwater SedimentKAGEPIDDERFIVRGDLVIKDTPFEVELTGRVRGHGQGKAGDERLVIDAQGSFDWGTTTVDLTAAVSAAKAA
Ga0193713_114327113300019882SoilVKDTPFEVELEGRIRGRGQNQAGDDRIVIDARGAFDWGTTTVEITAAVSAVKEA
Ga0193693_104108513300019996SoilDTPFEIELEGRIRGQGQGKAGDERLLVDARGAFDWGTTTVEITAAVSAVKEA
Ga0193735_112557913300020006SoilGEDTFHVRGELTIKDTPFEIELDGSVRGVGTGKAGDERLVVDAKGAFDWGTTTVQLTAAVSATKEA
Ga0193733_109083413300020022SoilLDDERFRARGNLTVKDTPFEIELEGLVRGHGQGKAGDERLLVDASGAFDWGTTTVELTAAVSAVKEA
Ga0222622_1133691923300022756Groundwater SedimentEIELEGLVRGHGQGKAGDERLLVDASGAFDWGTTTVELTAAVSAVKEA
Ga0247788_113316723300022901SoilVKEQPFEVELQGRVRGHGTGKAGDERIVLDVDGSFDWGTTTVEITAGVSATKQV
Ga0247752_103578013300023071SoilSTSVEPVGDDRFALRGQLFVKEQPFEVELQGRVRGHGTGKAGDERIVLDVDGSFDWGTTTVEITAGVSATKQV
Ga0247694_100104213300024178SoilLFVKEQPFEVELEGRIRGRGQGKAGDDRLLVDARGSFDWGTTTVEITAAVSAVKA
Ga0247695_100319413300024179SoilESTAVEPLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKAGDDRLLLDARGSFDWGTTTVEITAAVSAVKA
Ga0247680_101913613300024246SoilFTLRGNLFVKEQPFEVELEGRIRGRGQGKAGDDRLLVDARGSFDWGTTTVEITAAVSAVK
Ga0247690_101909013300024287SoilEIRFESTAVEPLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKVGDDRLLLDARGSFDWGTTTVEITAAVSAVKA
Ga0207699_1036938113300025906Corn, Switchgrass And Miscanthus RhizosphereLDDKRFSLRGNLFVKEHPFEVELEGTIRGRGQGKAGDDRLLLDARGSFDWGTTTVEITAAVSAVKA
Ga0207649_1075314123300025920Corn RhizosphereATPFEVELEGRVRGHGQGKAGDERLLVDARGTFEWGSTSVEITAAVSAVKEA
Ga0207700_1020359343300025928Corn, Switchgrass And Miscanthus RhizosphereEIRFESTAVELLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKAGDDRLLLDARGSFDWGTTTVEITAAVSAVKA
Ga0207706_1021705543300025933Corn RhizosphereELTIKETPFEVELDGRLRGVGTGKAGDERLLVDARGTFEWGTTAVEVTAAVSAAKEA
Ga0207686_1102533513300025934Miscanthus RhizosphereAVDALDDERFTLRGNLFVKDTPFEVEFEGRVRGRGQGQAGDERIVIDARGAFDWAGTTVEITAAVSAAREA
Ga0207658_1194114413300025986Switchgrass RhizosphereRFTLRGNLFVKDTPFEVEFEGRVRGRGQGQAGDERIVIDARGAFDWAGTTVEITAAVSAAREA
Ga0209472_110823333300026323SoilGELTVKETPFELELDGRVRGVGTGKAGDERLVIDARGSFDWGTTTVDVTAAVSATKEA
Ga0307291_117647423300028707SoilIRFESKAVEPIDDERFIVRGDLVIKDTPFEVELTGRVRGHGQGKAGDERLVIDAQGSFDWGTTTVDLTAAVSAAKAA
Ga0307285_1001121913300028712SoilEPIDDERFIVRGDLVIKDTPFEVELTGRVRGHGEGKAGDERLVIDAQGSFDWGTTTVDLTAAVSAAKAA
Ga0307303_1001148413300028713SoilLTVKDTPFEIELEGRVRGHGQGKAGDERLLVDASGAFDWGTTTVELTAAVSAVKEA
Ga0307309_1007015323300028714SoilIVKDTPFEIELEGRIRGQGQGKAGDERLLVDARGSFDWGTTTVEITAAVSAVKEA
Ga0307298_1002829413300028717SoilRFQARGNLIVKDTPFEIELEGRIRGQGQGKAGDERLLVDARGSFDWGTTTVEITAAVSAVKEA
Ga0307317_1029728113300028720SoilRGNLTIKDTPFEIELEGRIRGQGQGKAGDERLLVDARGAFDWGTTTVEITAAVSAVKEA
Ga0307315_1010207333300028721SoilEIELEGRIRGQGQGKAGDERLLVDARGSFDWGTTTVEITAAVSAVKEA
Ga0307280_1008042613300028768SoilEPVADDRFRVRGNLVIKDMPFEIELDSRVRGVGQGKAGDERVVLDGRGSFEWGTTTVELTVAVSATKEA
Ga0307280_1030275413300028768SoilDRFQARGNLIVKDTPFEIELEGRIRGQGQGKAGDERLLVDARGSFDWGTTTVEITAAVSAVKEA
Ga0307280_1032268523300028768SoilELRIKETPFEVELDGRLRGVGTGKAGDERLLVDARGTFEWGTTAVEVTAAVSAAKEA
Ga0307280_1041558413300028768SoilIRFETTVVEPLDAERFRARGNLIVKDTPFEVELEGRVRGHGQGKAGDERLLVDARGTFDWGTTTVEIAAAVSAVMEA
Ga0307306_1004121913300028782SoilVELEGRVRGHGQGKAGDERLLVDARGTFDWGTTTVEIAAAVSAVMEA
Ga0307282_1042899923300028784SoilRSTAVEPTGNDAYRIRGDLTIKETPFEVELDGRLRGVGTGKAGDERLLVDARGTFEWGTTAVEVTAAVSAAKEA
Ga0307282_1050346323300028784SoilPEIRFASTAVEPVDGERFSLRGGLFVKESPFEIELEGRIRGRGQGKAGDERLLVDVRGSFDWGTTTVEITGAVSATKEA
Ga0307287_1002400713300028796SoilPEIRFESKAVEPIDDERFIVRGDLVIKDTPFEVELTGRVRGHGQGKAGDERLVIDAQGSFDWGTTTVDLTAAVSAAKAA
Ga0307292_1001269613300028811SoilPTGDDAFRIRGELTIKETPFEVELDGRLRGVGTGKAGDERLLVDARGTFEWGTTAVEVTAAVSAAKEA
Ga0307292_1002185213300028811SoilKETPFEVELTGRVRGHGEGKAGDERLVIDAQGSFDWGTTTVDLTAAVSAAKAA
Ga0307296_1009315013300028819SoilAVEPTGNDAFRIRGELTIKETPFEVELDGRLRGVGTGKAGDERLLVDARGTFEWGTTAVEVTAAVSAAKEA
Ga0307289_1006309843300028875SoilDDRFQARGNLIVKDTPFEIELEGRIRGQGQGKAGDERLLVDARGSFDWGTTTVEITAAVSAVKEA
Ga0307300_1025725523300028880SoilAVEPTGDDAFRIRGELTIKETPFEVELDGRLRGVGTGKAGDERLIVDARGTFEWGTTAVEVTAAVSAAKEA
Ga0268241_1006455123300030511SoilFESTAVEPLDEQRFAFRGNLFVKEQPFEVELEGKIRGRGQGKAGDDRLLLDARGSFDWGTTTVEVTAAVSAVKD
Ga0268241_1019482523300030511SoilGNLIVKEQPFEVELEGRVRGQGTGQAGDQRLLLDVRGLFDWGTTTVEVTAAVSAAKEA
Ga0307501_1017395513300031152SoilDTPFEVELEGRIRGRGQNQAGDDRIVIDARGAFDWGTTTVEMTAAVSAVKEA
Ga0310886_1040682713300031562SoilFEVELQGRVRGHGTGKAGDERIVLDVEGSFDWGTTTVEITAGVSATKQV
Ga0307405_1062990123300031731RhizosphereGDDLFALRGNLFVKEQPFEVELQGRLRGRGTGKAGDERIVLDVDGSFDWGTTTVEITAGVSATKET
Ga0307412_1229626313300031911RhizosphereIGDDRFAVRGNLFVKEQPFEVELQGRLRGRGTGKAGDERIVLDVDGSFDWGTTSVEITAGVSATKEA
Ga0308175_10019320313300031938SoilIVKGSPFEVELEGRIRGHGQGKAGDERVLIDARGAFDWGSTRVEVMAAVSAVKEA
Ga0308176_1065694313300031996SoilFVKGSPFEVELEGRVRGHGQGKAGDERVLIDARGAFDWGSTRVEVMAAVSAVKEA
Ga0310902_1012377733300032012SoilPEIRFESTAVEPLDDQRFTLRGNLFVKEQPFEVELEGRIRGRGQGKAGDDRLLVDARGSFDWGTTTVEITAAVSAVKA
Ga0335083_1081076923300032954SoilKDTPFEIELETRVRGLGQGQRGDERIVLDARGAFEWGTTTVELTVAVSAAKEA
Ga0373948_0034218_2_1813300034817Rhizosphere SoilLRGNLFVKEHPFEVELEGTIRGRGQGKAGDDRLLLDARGSFDWGTTTVEITAAVSAVKA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.