Metagenome / Metatranscriptome Family F085674

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085674
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	145 residues
Representative Sequence	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTATLLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS
Number of Associated Samples	93
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.11 %
% of genes near scaffold ends (potentially truncated)	45.95 %
% of genes from short scaffolds (< 2000 bps)	72.97 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.766 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (9.009 % of family members)
Environment Ontology (ENVO)	Unclassified (32.432 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.97% β-sheet: 0.00% Coil/Unstructured: 27.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.13.1.1: Bacteriorhodopsin-like	d2jafa_	2jaf	0.67751
f.13.1.1: Bacteriorhodopsin-like	d1h2sa_	1h2s	0.67291
f.13.1.0: automated matches	d4jq6a_	4jq6	0.66672
f.13.1.0: automated matches	d7crja_	7crj	0.66589
f.13.1.1: Bacteriorhodopsin-like	d6s6ca_	6s6c	0.66487

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF02142	MGS	3.60
PF00890	FAD_binding_2	3.60
PF00300	His_Phos_1	2.70
PF01641	SelR	2.70
PF13380	CoA_binding_2	2.70
PF00440	TetR_N	1.80
PF00266	Aminotran_5	1.80
PF01161	PBP	1.80
PF07994	NAD_binding_5	0.90
PF00278	Orn_DAP_Arg_deC	0.90
PF01053	Cys_Met_Meta_PP	0.90
PF02517	Rce1-like	0.90
PF00037	Fer4	0.90
PF00905	Transpeptidase	0.90
PF12697	Abhydrolase_6	0.90
PF13238	AAA_18	0.90
PF12867	DinB_2	0.90
PF07366	SnoaL	0.90
PF03160	Calx-beta	0.90
PF00160	Pro_isomerase	0.90
PF04023	FeoA	0.90
PF00005	ABC_tran	0.90
PF00339	Arrestin_N	0.90
PF00211	Guanylate_cyc	0.90
PF01180	DHO_dh	0.90
PF10851	DUF2652	0.90
PF00365	PFK	0.90
PF13183	Fer4_8	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	2.70
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.80
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.90
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.90
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.90
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.90
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.90
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.90
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.90
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.90
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.90
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.90
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.90
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG1260	Myo-inositol-1-phosphate synthase	Lipid transport and metabolism [I]	0.90
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.90
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.90
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.90
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.90
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.90
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.90
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.90
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.90
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.90
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.90

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
All Organisms	root	All Organisms	34.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
cellular organisms	root	All Organisms → cellular organisms	34.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.43 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.90 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	19.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	0.90 %
Metamonada	clade	All Organisms → cellular organisms → Eukaryota → Metamonada	0.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.21 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.90 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Parabasalia	phylum	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	6.31 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.41 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.90 %
unclassified Thermoplasmata	no rank	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.90 %
Trichomonadida	order	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida	0.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.31 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.80 %
Bifidobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales	1.80 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.90 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.90 %
Trichomonadidae	family	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae	0.90 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.31 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.80 %
Bifidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae	1.80 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.90 %
unclassified Euzebyales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales	0.90 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.90 %
Trichomonas	genus	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas	0.90 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.31 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1.80 %
Bifidobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium	1.80 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	0.90 %
Trichomonas vaginalis	species	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas → Trichomonas vaginalis	0.90 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.90 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.90 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.31 %
Bifidobacterium scardovii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium scardovii	1.80 %
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	1.80 %
Trichomonas vaginalis G3	isolate	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas → Trichomonas vaginalis → Trichomonas vaginalis G3	0.90 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	0.90 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.90 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.90 %
Thermoplasmata archaeon	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_14050967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	707	Open in IMG/M
3300001330\|A305W6_1009826	Not Available	1171	Open in IMG/M
3300002822\|BMAI_1032380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1891	Open in IMG/M
3300003321\|soilH1_10319866	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2621	Open in IMG/M
3300003992\|Ga0055470_10181136	Not Available	567	Open in IMG/M
3300003993\|Ga0055468_10096391	All Organisms → cellular organisms → Bacteria → Terrabacteria group	828	Open in IMG/M
3300004070\|Ga0055488_10044224	Not Available	944	Open in IMG/M
3300004114\|Ga0062593_100266401	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300004114\|Ga0062593_103014165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium scardovii	539	Open in IMG/M
3300004156\|Ga0062589_101420153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	678	Open in IMG/M
3300004156\|Ga0062589_101584921	Not Available	648	Open in IMG/M
3300004157\|Ga0062590_100218486	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300004157\|Ga0062590_100704719	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300004463\|Ga0063356_100670306	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300004463\|Ga0063356_103335066	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300004643\|Ga0062591_101825360	Not Available	621	Open in IMG/M
3300005093\|Ga0062594_102490685	Not Available	568	Open in IMG/M
3300005344\|Ga0070661_100375011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1121	Open in IMG/M
3300005444\|Ga0070694_101401939	Not Available	590	Open in IMG/M
3300005468\|Ga0070707_102305300	Not Available	506	Open in IMG/M
3300005471\|Ga0070698_102186853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	507	Open in IMG/M
3300005535\|Ga0070684_100414687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1243	Open in IMG/M
3300005564\|Ga0070664_102375354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium scardovii	503	Open in IMG/M
3300005577\|Ga0068857_101465136	Not Available	665	Open in IMG/M
3300005873\|Ga0075287_1004269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1701	Open in IMG/M
3300005888\|Ga0075289_1004057	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300006046\|Ga0066652_101763907	Not Available	561	Open in IMG/M
3300006057\|Ga0075026_100449167	Not Available	734	Open in IMG/M
3300006572\|Ga0074051_10751503	Not Available	532	Open in IMG/M
3300006914\|Ga0075436_101510582	Not Available	510	Open in IMG/M
3300007775\|Ga0102953_1003044	All Organisms → cellular organisms → Bacteria	9590	Open in IMG/M
3300009868\|Ga0130016_10468256	Not Available	816	Open in IMG/M
3300010397\|Ga0134124_11095090	Not Available	813	Open in IMG/M
3300011119\|Ga0105246_10489200	Not Available	1043	Open in IMG/M
3300011431\|Ga0137438_1005465	All Organisms → cellular organisms → Bacteria	3544	Open in IMG/M
3300011439\|Ga0137432_1221529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	611	Open in IMG/M
3300012004\|Ga0120134_1000003	All Organisms → cellular organisms → Bacteria	451617	Open in IMG/M
3300012916\|Ga0157310_10110445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	898	Open in IMG/M
3300013306\|Ga0163162_12062841	Not Available	654	Open in IMG/M
3300014260\|Ga0075307_1041793	All Organisms → cellular organisms → Eukaryota → Metamonada → Parabasalia → Trichomonadida → Trichomonadidae → Trichomonas → Trichomonas vaginalis → Trichomonas vaginalis G3	858	Open in IMG/M
3300014295\|Ga0075305_1029680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	951	Open in IMG/M
3300015077\|Ga0173483_10887060	Not Available	524	Open in IMG/M
3300015371\|Ga0132258_10451372	All Organisms → cellular organisms → Bacteria	3205	Open in IMG/M
3300015371\|Ga0132258_10734126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2487	Open in IMG/M
3300015371\|Ga0132258_10836448	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300015371\|Ga0132258_11501937	Not Available	1701	Open in IMG/M
3300015372\|Ga0132256_100588302	Not Available	1227	Open in IMG/M
3300015372\|Ga0132256_100860082	Not Available	1023	Open in IMG/M
3300015373\|Ga0132257_102684627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	648	Open in IMG/M
3300015374\|Ga0132255_101281544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	1105	Open in IMG/M
3300015374\|Ga0132255_103243792	Not Available	693	Open in IMG/M
3300017961\|Ga0187778_10595628	Not Available	741	Open in IMG/M
3300022883\|Ga0247786_1112538	All Organisms → cellular organisms → Bacteria → Terrabacteria group	595	Open in IMG/M
3300022899\|Ga0247795_1070840	Not Available	601	Open in IMG/M
3300025920\|Ga0207649_11415978	Not Available	550	Open in IMG/M
3300025927\|Ga0207687_11321638	Not Available	620	Open in IMG/M
3300025938\|Ga0207704_11561244	Not Available	567	Open in IMG/M
3300025945\|Ga0207679_11123006	Not Available	721	Open in IMG/M
3300026003\|Ga0208284_1005235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1003	Open in IMG/M
3300026025\|Ga0208778_1011147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	847	Open in IMG/M
3300026031\|Ga0208909_1007192	Not Available	1244	Open in IMG/M
3300026033\|Ga0208652_1041015	Not Available	525	Open in IMG/M
3300026063\|Ga0208656_1007816	Not Available	740	Open in IMG/M
3300026066\|Ga0208290_1017880	Not Available	740	Open in IMG/M
3300026116\|Ga0207674_10747907	Not Available	944	Open in IMG/M
3300026196\|Ga0209919_1015495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2467	Open in IMG/M
3300027876\|Ga0209974_10372892	Not Available	557	Open in IMG/M
3300029304\|Ga0119857_1057981	Not Available	564	Open in IMG/M
3300029984\|Ga0311332_10346337	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1146	Open in IMG/M
3300029989\|Ga0311365_11716853	Not Available	538	Open in IMG/M
3300030000\|Ga0311337_11276217	Not Available	643	Open in IMG/M
3300030002\|Ga0311350_11600137	Not Available	577	Open in IMG/M
3300030114\|Ga0311333_10465984	Not Available	1031	Open in IMG/M
3300030336\|Ga0247826_11052530	Not Available	648	Open in IMG/M
3300031256\|Ga0315556_1056159	Not Available	1601	Open in IMG/M
3300031341\|Ga0307418_1065620	Not Available	967	Open in IMG/M
3300031355\|Ga0307421_1032328	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon	1977	Open in IMG/M
3300031521\|Ga0311364_11032884	Not Available	820	Open in IMG/M
3300031716\|Ga0310813_12369990	Not Available	503	Open in IMG/M
3300031726\|Ga0302321_100509582	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1329	Open in IMG/M
3300031858\|Ga0310892_11108037	Not Available	562	Open in IMG/M
3300031908\|Ga0310900_11587574	Not Available	553	Open in IMG/M
3300031918\|Ga0311367_12033621	Not Available	554	Open in IMG/M
3300031943\|Ga0310885_10811580	Not Available	532	Open in IMG/M
3300031954\|Ga0306926_12680351	Not Available	542	Open in IMG/M
3300032770\|Ga0335085_10482705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1418	Open in IMG/M
3300032770\|Ga0335085_11111768	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300032828\|Ga0335080_11569947	Not Available	649	Open in IMG/M
3300033004\|Ga0335084_11042314	Not Available	822	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.07%
Host-Associated	Host-Associated	26.13%
Engineered	Engineered	1.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.16%
Plants	Host-Associated → Plants	26.13%
Aquatic	Environmental → Aquatic	9.91%
Wastewater	Engineered → Wastewater	0.90%
Bioreactor	Engineered → Bioreactor	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.71%
Peat	Environmental → Terrestrial → Peat	9.01%
Marine	Environmental → Aquatic → Marine	7.21%
Sediment	Environmental → Aquatic → Sediment	2.70%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.90%
Unclassified	Engineered → Bioreactor → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.21%
Loam	Environmental → Terrestrial → Soil → Loam	6.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.41%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.60%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.70%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.90%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.90%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.60%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.80%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.21%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.21%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.41%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.70%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.70%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.80%
Mangrove Soil	Environmental → Aquatic → Marine → Oceanic → Sediment → Mangrove Soil	0.90%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.90%
Anaerobic Bioreactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Anaerobic Bioreactor	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001330	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-5cm)- 6 month illumina	Environmental	Open in IMG/M
3300002822	Illumina_Fosmid_Bertioga	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004055	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007775	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014260	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014295	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026003	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026031	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2_rd (SPAdes)	Environmental	Open in IMG/M
3300026033	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026063	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026066	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026196	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300029304	Anaerobic bioreactor microbial community of Freshwater lake and wastewater samples from Australia - AOM-metagenome-Illumina	Engineered	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031256	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10	Environmental	Open in IMG/M
3300031341	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-20	Environmental	Open in IMG/M
3300031355	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-70	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_140509671	3300000363	Soil	RLRGMPGEPLLLEIAAIAVVIAGFTAVTATLVPPGGSWHPAMRLRQRAVVSTSFNVMFEALVPPIAFAWLGDAQAALAVASAGVAMYTTGIVIWRGRQFLRAGGNRTRTAVLLMTLGPTAALLFWANALVFRSVAVYALALCIQLSVAVVSFYSLVSAAQD*
A305W6_10098261	3300001330	Permafrost	VTGEALLLGIATIAVAVAGFTAVTSTLVPPGGAWSPAMRIRQRAIVSTSFNVVFESLAPQVIFAGTGDTVASFRIASAGVAIYATGIVIWRARQMLRAGGPRTPVALILFVVGPLATLLFWANALIFASLAVFALALCLQLSIAVVSFYSLVSA
BMAI_10323803	3300002822	Mangrove Soil	MPGEALLLNISLIAVAIAGFSGVTATLTPPGGSWHPAMRIRHRAIISTSFNVMFESLAPVIAFAILDDVRGAFVAASAVVAVYATGIVIVRARQLFKAGATLTPTMVVLFSLGPTATLLFWANALAFGSLAPYAIALCIQLLVAVVSFYSLVSAAQG*
soilH1_103198663	3300003321	Sugarcane Root And Bulk Soil	MGAEPLLLAIATIAVVVAGFTAVTSTLVPPGGSWSTGMRIRQRAIVSPSFNVMFEALVPSIVFAWLGDAHAALVVASAGVAAYATGIVTWRGRQFIRAGSYRTPATLFLFTLGPTATVLFWANALIFASVALYALALCVQLSVAVISFYSLVSAAQS*
Ga0055470_101811361	3300003992	Natural And Restored Wetlands	SIDCWPARDRLRAMPGEPLLIGIATIAVVVAGFTGVTATLVPPGGTWHPAMRIRQRAIVSTSFNVMFEALVPSIAFAWLGDARAAFVVASAGVAVYATGIVAWRGRQLLRAGGNRTRTTMVLFALGPTATLLFWANAIVVGSLAVYALALCVQLSVAVVSFYSLVSAAQG*
Ga0055468_100963912	3300003993	Natural And Restored Wetlands	MIRAMEGEALLLTIALAAVAVAGFTAVTSTLVPPGGAWHPAMRIRQRAIVSTSFNVMFESFVPSIVFFANGDARTSVAIASAGVAGYVTCIVIWRGRQLVRAGGAPSRTAIVLFALGPTATLLFWANAILFGSIAVYALALCIQLSVAVVSFYSLVSAADG*
Ga0055480_101989741	3300004055	Natural And Restored Wetlands	MPGEAFLLNVSLIAVAVAGFSGVTATLTPPGGSWHPAMRIRHRAIMSTSFNVMFESLAPLIAFAMLDDARSAFVAASAVVAVYATGIVIWRGRQLLRAGGPRTRTLAVLFALGPTA
Ga0055488_100442241	3300004070	Natural And Restored Wetlands	MLVGIATIAIAIAGFTAITSALEPPGGSWSPAMRLRQRAIVSTSFNVGLESFAPLIALAWLEDLRSALVVASLAVAIYTTAVVLFRARQFIRAGGLHTGMAGLTLFALGPIATLLFWSNAIVFASLAIFALALLVQLLVAIISFYSLVSAASS*
Ga0062593_1002664013	3300004114	Soil	VPPGGSWHPAMRLRQRAVVSTSFNVMFEALVPPIAFAWLGDAQAALAVASAGVAMYTTGIVIWRGRQFLRAGGNRTRTAVLLMTLGPTAALLFWANALVFRSVAVFALALCIQLSVAVVSFYSLVSAAQD*
Ga0062593_1030141651	3300004114	Soil	IPAMEGEALLVVIATIAVAVAGFTAVTSTLVPPGGSWSPTMRLRQRAIVSTSFNVVFEALAPLITFAWLGDERSALVVASFGVAVYATAIVLWRGRQFVRAGGYRTPSGLVLFAAGPLATLLFWANAFVFASLAVYSLALCIQLSVAVISFYSLVSTASG*
Ga0062589_1014201531	3300004156	Soil	AVTAALVPPGGSWHPAMRLRQRAVVSTSFNVMFEALAPAIVFAWLRDAQAALAVASAGVAMYTTGIVIWRGRQFLRAGGNRTRTALLLFTLGPTAALLFWANALVFRSVAVYALALCIQLSVAVVSFYSLVSAAQD*
Ga0062589_1015849211	3300004156	Soil	VPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGSWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDARSALMVASAGVAVYATGIVIWRARQFLQAGVNRTPTTMVLFTLGPTAALLFWLNALVFASVAVYALALCIQLSVAAVSFYS
Ga0062590_1002184861	3300004157	Soil	VPGEVLLVGIATIAVAIAGFTAITSTLEPPGGSWSPAMRLRQRAIVSTSFNVGFESFAPLIAFAWLDDLPSALVVASLVVAIYTTAIVLYRGRQVLRAGGLRTGPVGLFLVALGPIAALLFWANALVFASLAIFALALLVQLSVAVVSFYSLVSAASD*
Ga0062590_1007047192	3300004157	Soil	MPGEPLLLEIAAIAVVIAGFTAVTATLVPPGGSWHPAMRLRQRAVVSTSFNVMFEALVPPIAFAWLGDAQAALAVASAGVAMYTTGIVIWRGRQFLRAGGNRTRTAVLLMTLGPTAALLFWANALVFRSVAVFALALCIQLSVAVVSFYSLVSAAQD*
Ga0063356_1006703062	3300004463	Arabidopsis Thaliana Rhizosphere	MQFVPGEPLLLAIATISVVVAGFTAVTSTLAPTGGTWHPAMRIRQRAIVSTSFNVMFESLAPPIAFAATGDQGMSMIVASAGAAIYTTGIVYWRGRQIVRAGGPFTTSGLLLFGLGPAATLLFWANALIFHSVGVYALALSIQLSVAAVSFYSLVSAAQADGGQAV*
Ga0063356_1033350661	3300004463	Arabidopsis Thaliana Rhizosphere	MPGEPLLLEIAAIAVVIAGFTAVTATLVPPGGSWHPAMRLRQRAVVSTSFNVMFEALVPPIAFAWLGDAQAALAVASAGVAMYTTGIVIWRGRQFLRAGGNRTRTAVLLMTLGPTAALLFWANALVFRSVAVFALALCIQLSVAVVSFYSLVSAAQD
Ga0062591_1018253602	3300004643	Soil	MSVSPVYALDDPWTPESTTMRAMPGEPLLLAVATIAVVIAGFTAVTSTLVPPGGSWHPAMRIRQRAIVSTSSNVMFEALVPSIAFAWLGDARAAIMVASLGVAVYTSAVVVVRARQFLRAGMNRTRSAVALFALGPIAVLLFWVNGL
Ga0062594_1024906851	3300005093	Soil	VPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGSWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDARSALMVAIAGVAVYATGIVIWRARQFLQAGVNRTPTTMVLFTLGPTAALLFWLNALVFASVAVYALALCIQLSVAAVSFYS
Ga0070683_1009795452	3300005329	Corn Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNPTPTTIVLFTLGPT
Ga0070661_1003750111	3300005344	Corn Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALVPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTAALLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS*
Ga0070694_1014019391	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTAALLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS*
Ga0070707_1023053001	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPGEALLLEIAAIAVVVAGFTAVTATLVPPGGSWHPAMRIRQRAIVSTSFNVMFESLAPSIAFAWLGDARAAVAWASAGVAVYATGIVIWRGRQMVRAGSNRTRTAVVLFTLGPTATLLFWANALVFGSVAV
Ga0070698_1021868531	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPGEPLLLEIAAIAVVVAGFTAVTAALVPPGGSWHPAMRIRQRAVVSTSFNVMFESLVPSIAFAWLGDARAALVWASAGVAVYATGIVAWRGRQFLRAGGNRTRTAVVLFTLGPTATLLFWANALVYGSV
Ga0070684_1004146872	3300005535	Corn Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTATLLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS*
Ga0070684_1011287581	3300005535	Corn Rhizosphere	VPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGSWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDARFAMTVASAGVAVYATGIVIWRARQFLRAGGNRTPTTMVLFTLGPT
Ga0070664_1023753541	3300005564	Corn Rhizosphere	ATIAVAVAGFTAVTSTLVPPGGSWSPTMRLRQRAIVSTSFNVVFEALAPLITFAWLGDERSALVVASLGVAVYATAIVLWRGRQFVRAGGYRTPPGLVLFAAGPLATLLFWANAFVFASLAVYSLALCIQLSVAVISFYSLVSAANG*
Ga0068857_1011221101	3300005577	Corn Rhizosphere	VPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGSWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDARFAMTVASAGVAVYATGIVIWRARQFLRAGGNRTPTTMVLFTLGPTAALLFWLNALVF
Ga0068857_1014651361	3300005577	Corn Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTATLLFWANVLVFASVAVFALALCI
Ga0075287_10042693	3300005873	Rice Paddy Soil	MPGEALLLNISLIAVAVAGFSGVTATLTPPGGAWHPAMRIRQRAIISTSFNVMFESLAPVIAFALLDDVRGAFVTASAAAAVYATGIVIWRGRQLLRAGGQRTRSALVLFTLGPTATLLFWVNALVFGGLALYAIALCIQLSVAVVSFYSLVSTAQA*
Ga0075289_10040573	3300005888	Rice Paddy Soil	MPGEALLLNISLIAVAVAGFSGVTATLTPPGGVWHPAMRIRQRAIISTSFNVMFESLAPVIAFALLDDVRGAFVTASAAAAVYATGIVIWRGRQLLRAGGQRTRSALVLFTLGPTATLLFWVNALVFGGLALYAIALCIQLSVAVVSFYSLVSTAQA*
Ga0075290_10046191	3300005889	Rice Paddy Soil	MPGEALLLNISLIAVAVAGFSGVTATLTPPGGAWHPAMRIRQRAIISTSFNVMFESLAPVIAFALLDDVRGAFVTASAAAAVYATGIVIWRGRQLLRAGGQRTRSALVLF
Ga0075278_10844961	3300005893	Rice Paddy Soil	MPGEPLLIGIATIAVVVAGFTGVTATLVPPGGAWHPAMRIRQRAIVSTSFNVMFEALAPAIAFAWLDDARAAVVVASAGVALYATGIVIWRGRQLVKAGGPRTRTAIVLFALGPTATALFWA
Ga0066652_1017639071	3300006046	Soil	MPGEPLLLQIAAIAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAAPIVFAWLGDARSAIVVASAGVAVYTTGIVIWRGRQFRRAGGNRTRTALVLFTLGPTAALLFWGNALLFASLAVYALALCIQLSVAVVSFYSLVSAAES
Ga0075026_1004491671	3300006057	Watersheds	MPGEALLLTIATIAVAVAGFTAVTATLVPPGGGWHPAMRIRQRAIVSTSFNVMFEALVPSIAFAWLGDVHAAIVVASLGVAIYATVVVVVRGRQFLRAGGNRTRSSVVLFALGPTATLLFWANALVFASVAVYALALCIQLSVAVVSFYTLVSAAQE*
Ga0074051_107515031	3300006572	Soil	IAGFTAVTSTLVPPGGSWHPAMRIRQRAIVSTSINVMFEALVPSIAFAWLGDARAAIVVASLGVAIYTTVVVVVRGRQFLRAGMNRTRSAVALFALGPTAALLFWANALIFASLAVYALALCIQLSVAVISFYTLVSAAQD*
Ga0075436_1015105822	3300006914	Populus Rhizosphere	TSTLVPPGGAWHPAMRIRQRAIVSTSFNVMFESLAPSIVFAAIGDPRASVAVASAGVAIYATGVVTWRGRQLLRAGGILTRTGLVLFALGPTATLLFWANALVFGSVAVYALALCIQLSVAVVSLYSLVSAAQG*
Ga0102953_10030444	3300007775	Soil	MSVSNASEAGWPCDRLRRGPGESLLLTIALMAVAVAGFTAVTATLTPPGGAWHPAMRIRQRAIVSTAFNVMFESLAPSIAFLWIGDERATVVVASAGVAVYATGIVIWRGRQFMRAGGNRTPSAIVLFTLGPTATLLFWANALVVGSVAIYALALCIQLTVAVVSFYSLVSATQS*
Ga0105244_104995652	3300009036	Miscanthus Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTP
Ga0105243_114485171	3300009148	Miscanthus Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNPTPTTIVLFTLGPTAALL
Ga0130016_104682561	3300009868	Wastewater	MPGEPLLLGIATIAIVVAGFTGVTSAMTPSDGSWPPAMRIRQRAIVSTSFNVVFEALAPVIAFAWLDDPRGAFMLTSLIVAVYLTGIVTWRGRQLWRAGGNRTGSALVLFALGPIATLLFWANAIAIGGLVVYALALCIQLGVAAVSFYSLVSAAEG*
Ga0134124_110950902	3300010397	Terrestrial Soil	MEGEALLVVIATIAVAVAGFTAVTSTLVPPGGGSWSPTMRLRQRAIVSTSFNVVFEALAPLITFAWLGDERSALVVASFGVAVYATAIVLWRGRQFVRAGGYRTPSGLVLFAAGPLATLLFWANAFVFASLAVYSLALCIQLSVAVISFYSLVSTASG*
Ga0105246_104892002	3300011119	Miscanthus Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAAVALYATGIVIWRGRQFLRAGVHRTPTTIVLFTLGPTATLLFWANALVFASVAVFALALCI
Ga0105246_118088161	3300011119	Miscanthus Rhizosphere	VPGEPLLLEIAAIAVVIAGFTAVTATLVPPGGSWHPAMRIRQRAIVSTSFNVMFESLAPLVAFAWLGDARAALVVASAGAAVYLTGIVIWRGRQLRRAGGN
Ga0137438_10054653	3300011431	Soil	MPGEPLLLEIAALAVVVAGFTGVTAALVPPGGSWQPAMRIRQRAIVSTSFNVMFESLAPSIAFAWLGDARTALAWTSAGVAVYATGIVIWRGRQLLRAGGNRTRTAVVLFALGPTATLLFWANALVFGSVAVFALALCIQLSVAVVSFYSLVSAAQS*
Ga0137432_12215291	3300011439	Soil	VTSTLVPPGGSWHPAMRIRQRAIVSTSINVMFESLVPSIAFAWLGDARSAIVVASLGVAIYTTVVVVVRGRQFRRAGMNRSRSALALFALGPTAALLFWANALIFASLAVYALALCIQLSVAVISFYTLVSAAQD*
Ga0120134_10000032	3300012004	Permafrost	VTGEALLLGIATIAVAVAGFTAVTSTLVPPGGAWSPAMRIRQRAIVSTSFNVVFESLAPQVIFAGTGDTVASFRIASAGVAIYATGIVIWRARQMLRAGGPRTPVALILFVVGPLATLLFWANALIFASLAVFALALCLQLSIAVVSFYSLVSAAQS*
Ga0157302_101360002	3300012915	Soil	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVAMYATGIVIWRGRQFLRAGGNPTPTTIVLF
Ga0157310_101104452	3300012916	Soil	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALVPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLCPTAALLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS*
Ga0137416_121454811	3300012927	Vadose Zone Soil	MPGEALLLGIATIAVAVAGFTAVTSTLVPPGGAWSPAMRIRQRAIVSTSFNVVFESLAPQIIFAGTGDAVISFRWASAGVAIYATGIVIWRARQMLRAGGPRTLIALVLFVIGPTATLLFWANAL
Ga0163162_120628411	3300013306	Switchgrass Rhizosphere	MEGEALLVVIATIAVAVAGFTAVTSTLVPPGGGSWSPTMRLRQRAIVSTSFNVVFEALAPLITFAWLGDERSALVVASLGVAVYATAIVLWRGRQFARAGGYRTPSGLLLFAAGPLATLLFWANAFVFASLAVYSLALCIQLSVAVIS
Ga0075307_10417931	3300014260	Natural And Restored Wetlands	MPGEVMLVGIATIAIAIAGFTAITSALEPPGGSWSPAMRLRQRSIVSTSFNVGLESFAPLIAFAWLEELHSALVVASLVVAIYTTSVVLFRGRQFVRAGGMHTGVAGLTLFALGPTATLLFWANAIVFASLAIFALALLVQLLVAMISFYSLVSAASS*
Ga0075305_10296802	3300014295	Natural And Restored Wetlands	MPAMVGEALLLAIASVAAVIAGFAAVTATLTPPEGSWSPVQRIRQRAIVSTSFNVGLESFAPLIAFAWLEELHSALVVASLVVAIYTTSVVLFRGRQFVRAGGMHTGVAGLTLFALGPTATLLFWANAIVFASLAIFALALLVQLLVAMISFYSLVSAASS*
Ga0157379_106140951	3300014968	Switchgrass Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVAVYATGIVIWRARQFLQAGVNRTPTTMVLFTLGPTAALLF
Ga0173483_103614661	3300015077	Soil	MPGEPLLLEIAAIAVVIAGFTAVTATLVPPGGSWHPAMRLRQRAVVSTSFNVMFEALAPAIVFAWLRDAQAALAVASAGVAMYTTGIVIWRGRQFLRAGGNRT
Ga0173483_108870601	3300015077	Soil	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAAVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTAALLFWSNALVFASVAVFALALCI
Ga0132258_104513724	3300015371	Arabidopsis Rhizosphere	MPGEPLLLAIATVAVVVAGFTAVTATLVPPGGSWHPAMRIRQRAIVSTSFNVMFESFAPPIAFAWLGDARVALTVASAGVAVYATGIVTWRSRQFLRAGSNRTRTAVVLFALGPTATLLFWANALVFGSVAVYALALCIQLSVAVVSFYSLISAAES*
Ga0132258_107341261	3300015371	Arabidopsis Rhizosphere	AIAVVIAGFTGVTATLVPTGGSWQPAMRIRQLAIVSTSFNVMFESLAPLVAFAWLGDARAALVVASASVAVYLTGIVIWRGRQLWRAGGNRTRTAVVLFTLGPTATLLFWANAFVFASVAVYALALCIQLSVAAVSFYSLVSAAQS*
Ga0132258_108364482	3300015371	Arabidopsis Rhizosphere	VPGEVLLVGIATIAVAVAGFTAVTSTLEPPGGSWSAAMRLRQRAIVSTSFNVAFEALAPLIVFPWLDDERSSFVVASFLVAVYTTVIVVWRGRQFIRAGGLRTGAVGLVLFATGPIAALLFWANAIVFASLAVYALALLVQLSVALVSFYSLVSAASEAS*
Ga0132258_115019372	3300015371	Arabidopsis Rhizosphere	VPGDVLLVGIATIAVAVAGFTAVTSTLVPPGGSWSPPMRLRQRAIVSPSFNVVFEALAPLIAFAWLDDARSAMVVASLGVAIYATGVVLYRGRQFVRAGGYRTPAGLVLFGAGPIATLLFWANAIVFASLAVYALALCIQLSVAVISFYSLVSAANNG*
Ga0132256_1005883023	3300015372	Arabidopsis Rhizosphere	VPGDVLLVGIATIAVAVAGFTAVTSTLVPPGGSWSPPMRLRQRAIVSPSFNVVFEALAPLIAVAWLDDARSAMVVASLGVAIYATGVVLYRGRQFVRAGGYRTPAGLVLFGAGPIATLLFWANAIVFAS
Ga0132256_1008600822	3300015372	Arabidopsis Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALVPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTATLLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS*
Ga0132257_1026846271	3300015373	Arabidopsis Rhizosphere	MPGEPLLLAIATVAVVVAGFTAVTATLVPPGGSWHPAMRIRQRAIVSTSFNVMFESFAPPIAFAWLGDARVALTVASAGVAVYATGIVIWRSRQFLRAGSNRTRTPVVLFTLGPTATLLFWANALVFGSVAVYA
Ga0132257_1046322752	3300015373	Arabidopsis Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGTRTPTTIVLFTLGPTATLLFWA
Ga0132255_1012815442	3300015374	Arabidopsis Rhizosphere	MPGEPLLLAIATVAVVVAGFTAVTATLVPPGGSWHPAMRIRQRAIVSTSFNVMFESFAQPIAFAWLGDARVALTVASAGVAVYATGIVIWRSRQFLGAGSNRTRTAVVLFTLGPTATLLFWANALVFGSVAVYALALCIQLSVAVVSFYSLISAAES*
Ga0132255_1032437921	3300015374	Arabidopsis Rhizosphere	MRDMPGEPLLLSIATIAVVIAGFTAVTSTLVPPGGSWHPAMRIRQRAIVSTSINVMFEALVPSIAFAWLGDARSAIVVASLGVAIYTTIVVVVRGRQFLRAGMNRTRSALALFALGPIAALLFWANALMFASLAIYALALCIQLSVAVISFYTLVSAAQD*
Ga0187778_105956281	3300017961	Tropical Peatland	MPGDTLLIGIATIAVAVAGFTAVTSTLVPPGGSWSPQMRLRQRAIVSTSFNVVFEALVPLIAFAWLGDPRAALVVASLGVAIYATWIVVWRGRQFLRSGGFNSPAVLIMFTAGPIATLLFWANVALGSLAVFALALCIQLSVAVVSFYSLVSAASG
Ga0247786_11125382	3300022883	Soil	MPGEPLLIEIAAIAVVIAGFTAVTATLVPPGGSWHPAMRLRQRAVVSTSFNVMFEALVPPIAFAWLGDAQAALAVASAGVAMYTTGIVIWRGRQFLRAGGNRTRTAVLLMTLGPTAALLFWANALVFRSVAVFALALCIQLS
Ga0247745_10879252	3300022898	Soil	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAAVALYATGIVIWRGRQFLRAGVNPTPTTIVLFTLGPTAALLF
Ga0247795_10708401	3300022899	Soil	VPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGSWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDARFAMTVASAGVAVYATGIVIWRARQFLRAGGNRTPTTMVLFTLGPTAALLFWLNALVFASVAVYALALCIQ
Ga0207649_114159781	3300025920	Corn Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALVPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTATLLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS
Ga0207687_113216381	3300025927	Miscanthus Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGVNPTPTTIVLFTLGPTAALLFWANALVFASVAV
Ga0207704_115612441	3300025938	Miscanthus Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTAALLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSA
Ga0207679_111230061	3300025945	Corn Rhizosphere	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALVPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTAALLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS
Ga0208777_10079492	3300025996	Rice Paddy Soil	MPGEALLLNISLIAVAVAGFSGVTATLTPPGGAWHPAMRIRQRAIISTSFNVMFESLAPVIAFALLDDVRGAFVTASAAAAVYATGIVIWRGRQLLRAGGQRT
Ga0208284_10052352	3300026003	Rice Paddy Soil	MPGEALLLNISLIAVAVAGFSGVTATLTPPGGAWHPAMRIRQRAIISTSFNVMFESLAPVIAFALLDDVRGAFVTASAAAAVYATGIVIWRGRQLLRAGGQRTRSALVLFALGPTATLLFWVNALVFGGLALYAIALCIQLS
Ga0208778_10111472	3300026025	Rice Paddy Soil	MQGSVRVEPGDRLRGMPGEALLLNISLIAVAVAGFSGVTATLTPPGGAWHPAMRIRQRAIISTSFNVMFESLAPVIAFALLDDVRGAFVTASAAAAVYATGIVIWRGRQLLRAGGQRTRSALVLFTLGPTATLLFWVNALVFGGLALYAIALCIQLSVAVVSFYSLVSTAQA
Ga0208909_10071922	3300026031	Natural And Restored Wetlands	MPGEVMLVGIATIAIAIAGFTAITSALEPPGGSWSPAMRLRQRSIVSTSFNVGLESFAPLIAFAWLEELHSALVVASLVVAIYTTSVVLFRGRQFVRAGGMHTGVAGLTLFALGPTATLLFWANAIVFASLAIFALALLVQLLVAMISFYSLVSAASS
Ga0208652_10410151	3300026033	Natural And Restored Wetlands	MPGEVMLVGIATIAIAIAGFTAITSALEPPGGSWSPAMRLRQRSIVSTSFNVGLESFAPLIAFAWLEELHSALVVASLVVAIYTTSVVLFRGRQFVRAGGMHTGVAGLTLFALGPTATLLFWANAIVFASLAIFALALLVQLLVAMISF
Ga0208656_10078161	3300026063	Natural And Restored Wetlands	MLVGIATIAIAIAGFTAITSALEPPGGSWSPAMRLRQRAIVSTSFNVGLESFAPLIALAWLEDLRSALVVASLAVAIYTTAVVLFRARQFIRAGGLHTGMAGLTLFALGPIATLLFWSNAIVFASLAIFALALLVQLLVAIISFYSLVSAASS
Ga0208290_10178801	3300026066	Natural And Restored Wetlands	MPGEALLLNISLIAVAVAGFSGVTATLTPPGGAWHPAMRIRQRAIISTSFNVMFESLAPVIAFALLDDVRGAFVTASAAAAVYATGIVIWRGRQLLRAGGQRTRSALVLFTLGPTATLLFWVNALVFGGLALYAIALCIQLSVAVVSFYSLVSTAQA
Ga0207708_100783841	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGSWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDARSALMVASAGVAVYATGIVIWRARQ
Ga0207674_107479072	3300026116	Corn Rhizosphere	VPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGSWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDARFAMTVASAGVAVYATGIVIWRARQFLRAGGNRTPTTMVLFTLGPTAALLFWLNALVFASVAVYALALCIQLSVAAVSFYSLISAAES
Ga0209919_10154953	3300026196	Soil	MSVSNASEAGWPCDRLRRGPGESLLLTIALMAVAVAGFTAVTATLTPPGGAWHPAMRIRQRAIVSTAFNVMFESLAPSIAFLWIGDERATVVVASAGVAVYATGIVIWRGRQFMRAGGNRTPSAIVLFTLGPTATLLFWANALVVGSVAIYALALCIQLTVAVVSFYSLVSATQS
Ga0209974_103728921	3300027876	Arabidopsis Thaliana Rhizosphere	AVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALVPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTATLLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS
Ga0119857_10579811	3300029304	Anaerobic Bioreactor	MPGEPLLLGIATIAIVVAGFTGVTSAMTPSDGSWPPAMRIRQRAIVSTSFNVVFEALAPVIAFAWLDDPRGAFMLTSLIVAVYLTGIVTWRGRQLWRAGGNRTGSALVLFALGPIATLLFWANAIAIGGLV
Ga0311332_103463372	3300029984	Fen	MPGEALLIGIATIAVAIAGFTAVTATLTPPGGSWSPQMRVRQRGIVSTSFNVVFEALAPLILFAWLEDVHSAFVIASTGVALYTAAIVVMRARQFLRAGSTRTPSTMLLMALGPTACVLFALNALVFASLAVYALALCVQMSVAVISFYSLVSAAQS
Ga0311365_117168531	3300029989	Fen	MPGEALLIGIATIAVVVAGFTAVTSTLTPPGGSWSPQMRVRQRGIVSTSFNVVFEALAPLILFAWLDDVHSAFVVASAGVAVYTAAIVVMRARQFLRAGSTRTPSTMLLMALGPTACLLFALNALVLASLAVYAL
Ga0311337_112762171	3300030000	Fen	FTAVTATLTPPGGSWSPAMRVRQRGIVSTGFNVVFEALAPLILFAWLEDVHSAFVIASTGVALYTAAIVVMRARQFLRAGSTRTPSTMLLMALGPTACVLFALNALVFASLAVYALALCVQMSVAVISFYSLVSAAQS
Ga0311350_116001371	3300030002	Fen	VMATIPGMPGEALLIGIATIAVVVAGFTAVTSTLTPPGGSWSPQMRVRQRGIVSTSFNVVFEALAPLILFAWLDDVHSAFVVASAGVAVYTAAIVVMRARQFLRAGSTRTPSTMLLMALGPTACLLFALNALVFASLAVYTLALLVQMSVAVISFYSLVSAAQS
Ga0311333_104659841	3300030114	Fen	LLIGIATIAVAIAGFTAVTATLTPPGGSWSPQMRVRQRGIVSTSFNVVFEALAPLILFAWLEDVHSAFVIASTGVALYTAAIVVMRARQFLRAGSTRTPSTMLLMALGPTACVLFALNALVFASLAVYALALCVQMSVAVISFYSLVSAAQS
Ga0247826_110525301	3300030336	Soil	VTSSLVPPGGTWHPAMRVRQRAIVSTSFNVMFEALAPLIAFAWLDDVRSAIVVASLGVAFYLTAVVILRGRQLLRAGMNRTRSAVVLFALGPTATLLFWANGLVFGSLAVYALALCVQLSVAVISFYTVVSAAQD
Ga0311366_116100251	3300030943	Fen	MPGEPLLLGIAAIAVAVAGFTTVTATLVPPGGSWHPAMRIRQRAIVSTSFNVMFESLAPSIAFVWLADVHAAITLVSAGVAAYATGIVTWRGRQFLRAGGNRTRTMLVLFALGPTATLLFWANVFA
Ga0315556_10561592	3300031256	Salt Marsh Sediment	MPGEPLLLAIASIAVIVAGFTAVTSTLVPPGGSWHPVMRIRQRAIVSTSFNVMFEALAPLIVFAWLGDAHNAFVVASAGVAVYATGIVVWRGRQLLRAGGHMTGTTMVLYALGPTATLLFWANAIAFGSLALYALALCVQLTVAVISFYSLVSAAQS
Ga0307418_10656201	3300031341	Salt Marsh	LAEDVQGSRRAHPRSLFGTRAPKRGYQRTSLPRARLRGMPGESLLLGIAAIAVIVAGFTAVTSTLEPPGGSWHPAMRIRQRAIVSTSFNVMFESLAPSIVFAWLGDPRAAFVVSSAGVAVYATGIVIWRGRQLLRAGGTLTGAAMLLYALGPTATLLFWVNAFVFGSPALYALALCVQLSVAIVSFYSLVSAAQG
Ga0307421_10323281	3300031355	Salt Marsh	VAKSAAERGYQRTSLPRARLRGMPGESLLLGIAAIAVIVAGFTAVTSTLEPPGGSWHPVMRIRQRAIVSTSFNVMFESLAPSIVFAWLGDPRAAFVVSSAGVAVYATGIVIWRGRQLLRAGGTLTGAAMLLYALGPTATLLFWVNAFVFGSPALYALALCVQLSVAIVSFYSLVSAAQG
Ga0311364_110328842	3300031521	Fen	QCASGGQVPEVMATIPGMPGEALLIGIATIAVAVAGFTAVTATLTPPGGSWSPAMRVRQRGIVSTGFNVVFEALAPLILFAWLDDVHAAFVIASAGVAIYTGVIVAMRARQFLRAGSTRTPSTMLLMALGPTACVLFALNALVFASLAVYTLALCVQMSVAVISFYSLVSAAQS
Ga0310887_101677663	3300031547	Soil	VPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGSWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDARSAMTVASAGVAVYATGIVIWRARQFLRAGGNRTPTTMVLFTLGPTAA
Ga0310813_123699901	3300031716	Soil	MEGEVLLVGIATIAVAVAGFTAVTSTLVPPGGAWSPTMRLRQRAIVSTSFNVVFEALTPLIAFAWLGDVRSAIVVASFAVAIYATGVVLYRGRQFVRAGGFRTPSGLVLFAAGPLATALFWANAIVFASLAVFALALCIQLSVAVI
Ga0302321_1005095821	3300031726	Fen	MPGEALLIGIATIAVAIAGFTAVTATLTPPGGSWSPQMRVRQRGIVSTSFNVVFEALAPLILFAWLEDVHSAFVIASTGVALYTAAIVVMRARQFLRAGSTRTPSTMLLMALGPTACLLFALNALVLASLAVYALALLVQMSV
Ga0302321_1035180571	3300031726	Fen	MPGEPLLLGIAAIAVAVAGFTTVTATLVPPGGSWHPAMRIRQRAIVSTSFNVMFESLAPSIAFVWLADVHAAITLVSAGVAAYATGIVTWRGRQFLRAGGNRTRTMLVLFALGP
Ga0310892_111080371	3300031858	Soil	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIMFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTIVLFTLGPTATLLFWANALVFASVAVFALALCIQLSVAAVSFYSLVSAAQS
Ga0310900_109011431	3300031908	Soil	MPGEPLLLEIAALAVVIAGFTAVTAVLVPPGGAWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDERAALTVASAGVALYATGIVIWRGRQFLRAGGNRTPTTI
Ga0310900_115875741	3300031908	Soil	PGEPLLLEIAALAVVIAGFTAVTAVLVPPGGSWHPAMRIRQRAVVSTSFNVMFEALAPSIVFAWLGDARFAMTVASAGVAVYATGIVIWRARQFLRAGGNRTPTTMVLFTLGPTAALLFWLNALVFASVAVYALALCIQLSVAAVSFYSLISAAES
Ga0311367_120336212	3300031918	Fen	VAGFTAVTATLVPPGGSWPPAMRIRQRAIVSTSFNVMFESLAPSIAFAWLADVHAAITLVSAGVAAYATGIVTWRGRQFLRAGGNRTRTMLVLFALGPTATLLFWANVFAGSVALYAFALCIQLSVAVVSFYSLISAAQA
Ga0310885_108115801	3300031943	Soil	IGRAVGVHSRRGLPTPVTRTPMSEVDWSRDRLRAMPGEVLLVGIATIAVVVAGFTGVTSTLVPPGGSWHPAMRIRQRAIVSTSFNVMFESLAPLIAFAWLGDARAAIVVASAGVAAYATGIVIWRGRQFLRAGGNWTRTAVVLFALGPTAALLFWANAFVFGSLAVYALALCIQLSV
Ga0306926_126803511	3300031954	Soil	MPAEALLLAIATIAVVVAGFTAVTSTLAPPEGSWSPAMRIRQRAIVSTSFNVMFESLAPSIVFAWLGDVHSAIVVASAGVAVYATGIVIWRGRQMIRAGAYRTASARLYFSLGPTATLLFWVNAIVFGSVALYAVALCVQLSIAVISFYS
Ga0335085_104827052	3300032770	Soil	LRDMPAEPLLLEIAAIAVVIAGFTAVTAVLVPPGGSWHPTMRIRQRAVVSTSFNVMFEALVPSIAFAWLGDAHAALVVASAGVAVYATGIVIWRGRQLRRAGGSRTPTTLLLYALGPIATLLFWTNAIVFVSVAAYALALCVQLSVAVVSFYSLISAADG
Ga0335085_111117682	3300032770	Soil	ATIAVAIAGFTAVTSTLSPPGGAWSPQMRLRQRAIVTTSFNVVFESLVPLIAFAWLGDERSAIVVASLGVAIYATGVVLYRGRQFLRTGGFRSPAVLIMFTAGPVATLLFWANVAVGSLALFALALCIQLSIAVVSFYSLVSAASG
Ga0335080_115699472	3300032828	Soil	NRRPFHEYDPLMPSEGLLVGIATIAVAVAGFTAVTSTLVPPTGSWSPAMRIRQRAIVSTSFNVVFEALAPLVAFALVNDERSALVGASAIVAMYATWVVIYRYRQILRAGGYRSVAGLILFIAGPTAMLLFWANALVLASAGVFALALCSQLLVAVVSFYTLVSAANGGEG
Ga0335084_110423141	3300033004	Soil	MPAEPLLLEIAAIAVVIAGFTAVTAVLVPPGGSWHPTMRIRQRAVVSTSFNVMFEALVPSIAFAWLGDAHAALVVASAGVAVYATGIVIWRGRQLRRAGGSRTPTTLLLYALGPIATLLFWTNAIVFVSVAAYALALCVQLSVAVVSFYSLISAADG
Ga0335084_121051492	3300033004	Soil	VVAGFTAVTATLVPPGGAWHPSMRIRQRAIVSTSFNVMFEALAPMIAFLWLDDAHQAIVVASAGVAVYATGIVVWRARQFLRAGAIRATSTIVLFTLGPIATALFWLNALVFASV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085674

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences