Metagenome Family F085646

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085646
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	105 residues
Representative Sequence	MDITREIKDIRDALNSIEISLQLLVAQKDGKVTSAFVSKKTISQRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFTYV
Number of Associated Samples	73
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.33 %
% of genes near scaffold ends (potentially truncated)	22.52 %
% of genes from short scaffolds (< 2000 bps)	64.86 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.099 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (43.243 % of family members)
Environment Ontology (ENVO)	Unclassified (49.550 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (47.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.02% β-sheet: 20.75% Coil/Unstructured: 46.23%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01022	HTH_5	6.31
PF13392	HNH_3	3.60
PF13385	Laminin_G_3	2.70
PF12836	HHH_3	2.70
PF00210	Ferritin	2.70
PF13692	Glyco_trans_1_4	0.90
PF02511	Thy1	0.90
PF00622	SPRY	0.90
PF00959	Phage_lysozyme	0.90
PF14528	LAGLIDADG_3	0.90
PF01464	SLT	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.50 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	4.50 %
Gammaproteobacteria bacterium TMED234	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4.50 %
Gammaproteobacteria bacterium TMED234	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	0.90 %
Unclassified	root	N/A	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10005253	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	7155	Open in IMG/M
3300001687\|WOR8_10030772	All Organisms → cellular organisms → Bacteria	7394	Open in IMG/M
3300002053\|SMTZ23_10046805	All Organisms → cellular organisms → Bacteria	5812	Open in IMG/M
3300005581\|Ga0049081_10166261	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300006033\|Ga0075012_10020597	All Organisms → cellular organisms → Bacteria	5605	Open in IMG/M
3300006637\|Ga0075461_10003388	All Organisms → cellular organisms → Bacteria	5229	Open in IMG/M
3300006637\|Ga0075461_10007109	All Organisms → cellular organisms → Bacteria	3710	Open in IMG/M
3300006734\|Ga0098073_1001141	All Organisms → cellular organisms → Bacteria	7823	Open in IMG/M
3300006734\|Ga0098073_1016769	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300006802\|Ga0070749_10032269	All Organisms → cellular organisms → Bacteria	3258	Open in IMG/M
3300006802\|Ga0070749_10035647	All Organisms → cellular organisms → Bacteria	3077	Open in IMG/M
3300006802\|Ga0070749_10123228	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300006802\|Ga0070749_10150835	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300006802\|Ga0070749_10258534	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300006802\|Ga0070749_10259428	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300006802\|Ga0070749_10273879	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300006802\|Ga0070749_10333597	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300006810\|Ga0070754_10187962	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300006916\|Ga0070750_10053551	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300006919\|Ga0070746_10032775	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300006919\|Ga0070746_10441798	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300007344\|Ga0070745_1262030	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300007346\|Ga0070753_1330041	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300007538\|Ga0099851_1043141	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300007538\|Ga0099851_1064444	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300007538\|Ga0099851_1164635	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300007539\|Ga0099849_1001873	All Organisms → cellular organisms → Bacteria	9840	Open in IMG/M
3300007541\|Ga0099848_1235076	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300007541\|Ga0099848_1259783	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300007541\|Ga0099848_1265369	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300007640\|Ga0070751_1179729	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300007640\|Ga0070751_1211354	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300007960\|Ga0099850_1024764	All Organisms → cellular organisms → Bacteria	2647	Open in IMG/M
3300007960\|Ga0099850_1032273	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300007960\|Ga0099850_1058605	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300008107\|Ga0114340_1000719	All Organisms → cellular organisms → Bacteria	26727	Open in IMG/M
3300008116\|Ga0114350_1004304	All Organisms → cellular organisms → Bacteria	16475	Open in IMG/M
3300008267\|Ga0114364_1097273	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300008450\|Ga0114880_1041089	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300009149\|Ga0114918_10315434	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010299\|Ga0129342_1046214	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300010299\|Ga0129342_1167969	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300010318\|Ga0136656_1007191	All Organisms → cellular organisms → Bacteria	4028	Open in IMG/M
3300010354\|Ga0129333_10148947	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300010389\|Ga0136549_10058715	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300010412\|Ga0136852_12107353	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300011118\|Ga0114922_10877052	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300013372\|Ga0177922_10703142	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300015050\|Ga0181338_1001303	All Organisms → cellular organisms → Bacteria	4552	Open in IMG/M
3300017777\|Ga0181357_1157448	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300017785\|Ga0181355_1021693	All Organisms → cellular organisms → Bacteria	2795	Open in IMG/M
3300019783\|Ga0181361_102476	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300020172\|Ga0211729_10068623	All Organisms → cellular organisms → Bacteria	11858	Open in IMG/M
3300020205\|Ga0211731_10472145	All Organisms → cellular organisms → Bacteria	11431	Open in IMG/M
3300021379\|Ga0213864_10005071	All Organisms → cellular organisms → Bacteria	5764	Open in IMG/M
3300022063\|Ga0212029_1033398	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300022167\|Ga0212020_1016082	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300022198\|Ga0196905_1006876	All Organisms → cellular organisms → Bacteria	3927	Open in IMG/M
3300022198\|Ga0196905_1074956	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300022200\|Ga0196901_1053216	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300022200\|Ga0196901_1119179	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300022200\|Ga0196901_1255739	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300022407\|Ga0181351_1001320	All Organisms → cellular organisms → Bacteria	7969	Open in IMG/M
3300025630\|Ga0208004_1010231	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300025646\|Ga0208161_1133208	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300025655\|Ga0208795_1085387	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300025671\|Ga0208898_1035857	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300025671\|Ga0208898_1152247	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300025674\|Ga0208162_1119268	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300025687\|Ga0208019_1004149	All Organisms → cellular organisms → Bacteria	6879	Open in IMG/M
3300025687\|Ga0208019_1097218	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300025687\|Ga0208019_1178438	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300025889\|Ga0208644_1001293	All Organisms → cellular organisms → Bacteria	21116	Open in IMG/M
3300026492\|Ga0256802_1071873	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300027659\|Ga0208975_1108029	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300027772\|Ga0209768_10369676	Not Available	580	Open in IMG/M
3300027814\|Ga0209742_10176256	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300027851\|Ga0209066_10022082	All Organisms → cellular organisms → Bacteria	5231	Open in IMG/M
3300027888\|Ga0209635_10799512	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300027888\|Ga0209635_11213724	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300027901\|Ga0209427_10099305	All Organisms → cellular organisms → Bacteria	2604	Open in IMG/M
3300027901\|Ga0209427_10269000	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300027901\|Ga0209427_10284330	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300027917\|Ga0209536_100006146	All Organisms → cellular organisms → Bacteria	18459	Open in IMG/M
3300027917\|Ga0209536_100059889	All Organisms → cellular organisms → Bacteria	4947	Open in IMG/M
3300027917\|Ga0209536_100610952	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
(restricted) 3300028569\|Ga0247843_1011965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	8744	Open in IMG/M
3300031539\|Ga0307380_10353922	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300031539\|Ga0307380_11278456	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031565\|Ga0307379_10294581	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300031565\|Ga0307379_10629421	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300031565\|Ga0307379_11316552	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031566\|Ga0307378_10722015	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300031669\|Ga0307375_10285543	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300031673\|Ga0307377_10164253	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300031673\|Ga0307377_10168012	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300031673\|Ga0307377_10363006	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300031707\|Ga0315291_10003497	All Organisms → cellular organisms → Bacteria	20271	Open in IMG/M
3300031758\|Ga0315907_10002422	All Organisms → cellular organisms → Bacteria	23487	Open in IMG/M
3300031787\|Ga0315900_10275778	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1414	Open in IMG/M
3300031834\|Ga0315290_10823103	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031857\|Ga0315909_10004510	All Organisms → cellular organisms → Bacteria	16372	Open in IMG/M
3300031857\|Ga0315909_10425821	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300031951\|Ga0315904_10116385	All Organisms → cellular organisms → Bacteria	2776	Open in IMG/M
3300031951\|Ga0315904_10391273	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300032116\|Ga0315903_10696474	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	760	Open in IMG/M
3300032116\|Ga0315903_10700314	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	757	Open in IMG/M
3300034012\|Ga0334986_0003707	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	12023	Open in IMG/M
3300034374\|Ga0348335_011291	All Organisms → cellular organisms → Bacteria	4866	Open in IMG/M
3300034374\|Ga0348335_051044	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300034418\|Ga0348337_119792	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	90.99%
Terrestrial	Environmental → Terrestrial	9.01%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	62.16%
Freshwater	Environmental → Aquatic → Freshwater	27.03%
Soil	Environmental → Terrestrial → Soil	9.01%
Sediment	Environmental → Aquatic → Sediment	1.80%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	47.75%
Oceanic	Environmental → Aquatic → Marine → Oceanic	12.61%
Lake	Environmental → Aquatic → Freshwater → Lake	9.91%
Clay	Environmental → Terrestrial → Soil → Clay	9.01%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.21%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	7.21%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.90%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	47.75%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	10.81%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	9.01%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	7.21%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.90%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	43.24%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	9.01%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	9.01%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	7.21%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.41%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.60%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.70%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.80%
Watersheds	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Watersheds	1.80%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.80%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.90%
Marine Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment	0.90%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.90%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.90%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001687	Deep Marine Sediments WOR-3-8_10	Environmental	Open in IMG/M
3300002053	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_SMTZ	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006033	Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006734	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019783	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.N	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026492	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 CS5	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027814	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-3-8_10 (SPAdes)	Environmental	Open in IMG/M
3300027851	Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15 (SPAdes)	Environmental	Open in IMG/M
3300027888	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)	Environmental	Open in IMG/M
3300027901	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300028569 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8m	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100052538	3300000116	Marine	MDITREIKDIRDALSSIETSLQLLVAQKEGKITSAFVSKKTVSQRLNIPSVAIDKLIHQGIVSKGESGLVESRHYCRVDPTERNSSKFLYDLHEITQAAWSNFTYV*
WOR8_100307728	3300001687	Marine Sediment	VIKGSPSTIYMDQTLKELKEIKQALTSIDISLQLFVSQKEGRVTSAFVSKKVISQRLNVPAVTLDKLIHQGIVSGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV*
SMTZ23_1004680512	3300002053	Marine Sediment	VIKGSPSTIYMDQTLKELKEIKQALTSIDTSLQLFVSQKEGRVTSAFVSKKVISQRLNVPAVTLDKLIHQGIVSGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV*
Ga0049081_101662612	3300005581	Freshwater Lentic	MDQTLKEIKTIREALTSIDISLQLLVSQKEGKTTSAFVSKKTISQRLNIPSVAIDKLIHQGIVSGGSSGLVEGKHYCKVDPTERNSSKFLYDPHAVMEAAWKNFTNV*
Ga0075012_100205975	3300006033	Watersheds	MEENLRQFKAIQRALDSIDTSLQLLVAQKNGKITAAFVSKKVISQRLNVPAVTVDKLIHQGIASGGKSGLVESVHYCKVDPEERNSSKFLFDSHAIMQAAWSNFTYV*
Ga0075461_100033885	3300006637	Aqueous	MDITREIKDIRDALNSIEISLQLLVAQKDGKATTAFVSKKVISQRLNIPSVTVDKLIHQGIVSKGESGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFTYV*
Ga0075461_100071095	3300006637	Aqueous	MDQTLKEIKSIREALSSIDISLQLLVAQKEGRATSAFVSKKAISERLNIPSVAIDKLIHQGIASKGESGLVEGKHYCKADPAERNSSKFLYDPHAVMNAAWKNFTYV*
Ga0098073_10011417	3300006734	Marine	MDITREIKDIRDALNSIETSLQLLVAQKEGKITSAFVSKKVISQRLNVPAVTVDKLIHQGIASGGDSGLVEGKHYCKVDPTERNSSKFLYDLHAIMQAAWSNFTYV*
Ga0098073_10167693	3300006734	Marine	MDITREIKDIRDALNSIEASLQLLVAQKGGKITSAFVSKKIVSQRLNVPAVTIDKLIHQGIASKGESGLVEGRHFCKTDPTERNSSKFLYDIHAITQAAWSNFTYV*
Ga0070749_100322693	3300006802	Aqueous	MDQTLKEIKSIREALSSIDISLQLLVAQKEGRVTSAFVSKKAISERLNIPSVAIDKLIHQGIASKGESGLVEGKHYCKADPAERNSSKFLYDPHAVMNAAWKNFTYV*
Ga0070749_100356475	3300006802	Aqueous	MDITREIKDIRNALNSIEISLQLLVAQKDGKVTSAFVSKKTISQRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFTYV*
Ga0070749_101232281	3300006802	Aqueous	MDQTLKEIKSIREALTSIDISLQLLVSQKEGKVTSAFVSKKAISERLNIPSVAIDKLIHQGIASKGESGLVEGKHYCKADPADRNSSKFLYDPHAVMNAAWKNFSYV*
Ga0070749_101508352	3300006802	Aqueous	MEITREIKDIRDALNSIETSLQLLVAQKEGKITSAFVSKKTVSQRLNIPSVTIDKLIHQGIVSKGESGLVESRHYCKVDPTERNSSKFLYDLHEITQAAWSNFIYV*
Ga0070749_102585343	3300006802	Aqueous	MDITREIKDIRDALNSIEISLQMLVAQKDNKITTAFVSKKVISQRLNIPSVTIDKLIHQGIVSGGESGLVEKKHYCKVDPSERNSSKFLYDLHAIIQAAWSNFTYV*
Ga0070749_102594282	3300006802	Aqueous	MDITREIKDIRDALSSIEISLQLLVAQKDGKVTSAFVSKKAIGQRLNIPSVTIDKLIHQGIVSGGDSGLVEGKHYCKVDPAERNSSKFLYDPHEVMQAAWSNFTYV*
Ga0070749_102738791	3300006802	Aqueous	MDITREIKDIRDALNSIEVSLQLLVSQKDGKVTSAFVSKKAISLRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFNYVPIPWRRSAD
Ga0070749_103335971	3300006802	Aqueous	MDQTLKEIKSIREALTSIDISLQLLVSQKEGKVTSAFVSKKAISQRLNIPSVAIDKLIHQGIASKGESGLVEGKHYCKADPAERNSSKFLYDPHAVMNAAWKNFTYV*
Ga0070754_101879621	3300006810	Aqueous	MDITREIKDIRDALNSIETSLQILVAQKEGKITSGFVSKKTVSQRLNIPSVAIDKLIHQGIVSKGESGLVESRHYCRVDPTERNSSKFL
Ga0070750_100535511	3300006916	Aqueous	LQLLVAQKDGKATTAFVSKKVISQRLNIPSVTVDKLIHQGIVSKGESGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFTYV*
Ga0070746_100327753	3300006919	Aqueous	MDQTLKEIKSIREALSSIDISLQLLVAQKEGRATSAFVSKKAISERLNIPSVAIDKLIHQGIASKGESGLVEGKHYCNTIPAQGNSSKFLYDPHAVMNAAWKNFTYV*
Ga0070746_104417982	3300006919	Aqueous	MEITREIKDIRDALNSIETSLQLLVAQKEGKITSAFVSKKTVSQRLNIPSVAIDKLIHQGIVSKGESGLVESRHYCRVDPTERNSSKFLYDLHEITQAAWSNFTYV*
Ga0070745_12620302	3300007344	Aqueous	MDITREIKDIRDALNSIEVSLQLLVSQKDGKVTSAFVSKKAISLRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPAERNSSKFLYDPHEVMQAAWRNFTDV*
Ga0070753_13300411	3300007346	Aqueous	SIEISLQLLVAQKDGKVTSAFVSKKAIGQRLNIPSVTIDKLIHQGIVSGGDSGLVEGKHYCKVDPAERNSSKFLYDPHEVMQAAWSNFTYV*
Ga0099851_10431412	3300007538	Aqueous	MNEHLTHLKNIQKALESIDISLQILVAQKDGKITSAFVSKKTVSQRLSVPSVTIDKLIHQGIVSGGESGLVESRHYCKTDPSERNSSKFLYDINAIMQAAWSNFTYV*
Ga0099851_10644443	3300007538	Aqueous	MDITREIKDIRDALNSIEISLQLLVSQKDGKVTSAFVSKKSISQRLNIPSVTIDKLIHQGIVSGGESGLVEGKHFCKVDPLERNSSKFLYDPHAIMQAAWSNFNYG*
Ga0099851_11646352	3300007538	Aqueous	MDITREIKDIRDALNSIEISLQLLVAQKDGKVTSAFVSKKAIGQRLNIPSVTIDKLIHQGIVSRGDSGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFTYV*
Ga0099849_100187315	3300007539	Aqueous	METTREIKDIRDALNSIETSLQLLVAQKDGKVTSAFVSKKTVSQRLNIPSVTVDKLIHQGIVSRGDSGLIEGKHYCKVDPTERNSSKFLYDIHAITQAAWSNFTYV*
Ga0099848_12350762	3300007541	Aqueous	MDITREIKDIRDALNSIEISLQLLVAQKDGKVTSAFVSKKTISQRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFTYV*
Ga0099848_12597832	3300007541	Aqueous	MDITREIKDIRDALNSIDVSLQLLVSQKNGRITSAFVSKKAISQRLNIPSVTIDKLIHQGIVSSGESGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFSYV*
Ga0099848_12653692	3300007541	Aqueous	MDITREIKDIRDALNSIEISLQLLVAQKYGKVTTAFVSKKAIGQRLNIPSVTIDKLIHQGIVSRGDSGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFTNV*
Ga0070751_11797292	3300007640	Aqueous	MDITREIKDIRDALSSIETSLQLLVAQKDGKVTSAFVSKKAISLRLNIPSVTIDKLIHQGIVSGGDSGLVEGKHYCKVDPAERNSSKFLY
Ga0070751_12113542	3300007640	Aqueous	MDITREIKDIRDALNSIEVSLQLLVSQKDGKVTSAFVSKKAISLRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFNYV*
Ga0099850_10247643	3300007960	Aqueous	MEITREIKDIRDALNSIEISLQLLVAQKDGKVTTAFVSKKTISQRLNIPSVTIDKLIHQGIVSGGDSGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFTYV*
Ga0099850_10322733	3300007960	Aqueous	MDITREIKDIRDALNSIETSLQLLVAQKEGKITSAFVSKKVISQRLNVPAVTVDKLIHQGIASGGDSGLVEGKHYCKVDPIERNSSKFLYDLHAIMQAAWSNFTYV*
Ga0099850_10586053	3300007960	Aqueous	MDITREIKDIRNALNSIETSLQLLVAQKEGRITSAFVSKKTVSQRLNIPAVTIDKLIHQGIVSQGESGLVEGKHYCRVDPTERNSSKFLFDIHAITQAAWNNFTYV*
Ga0114340_100071935	3300008107	Freshwater, Plankton	MDQTLKEIKTIREALTSIDISLQLLVSQKEGKTTSAFVSKKTISQRLNIPSVAIDKLIHQGIVSGGTSGLVEGKHYCKVDPTERNSSKFLYDPHAVMEAAWKNFTNV*
Ga0114350_100430422	3300008116	Freshwater, Plankton	MDITREIKDIRDALNSIEASLQLLVAQKGGKITNAFVSKKIVSQRLNVPAVTIDKLIHQGIASKGESGLVEGRHFCKTDPTERNSSKFLYDIHAITQAAWSNFTYV*
Ga0114364_10972732	3300008267	Freshwater, Plankton	MDITKDIKDIRDALNSIEVSLQLLVAQKDGKTTTAFVSKKAISQRLNIPSVTIDKLIHQGIVSQGESGLVEGKHYCKVDPSERNSSKFLYDPHAIMQAAWSNFSYV*
Ga0114880_10410894	3300008450	Freshwater Lake	LNSIEASLQLLVAQKGGKITNAFVSKKIVSQRLNVPAVTIDKLIHQGIASKGESGLVEGRHFCKTDPTERNSSKFLYDIHAITQAAWSNFTYV*
Ga0114918_103154342	3300009149	Deep Subsurface	VIKGSPSTIYMDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGRHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV*
Ga0129342_10462143	3300010299	Freshwater To Marine Saline Gradient	MNEHLTHLKNIQKALESIDISLQILVAQKDGKITSAFVSKKTVSQRLNVPSVTIDKLIHQGIVSGGESGLVESRHYCKTDPSERNSSKFLYDINAIMQAAWSNFTYV*
Ga0129342_11679691	3300010299	Freshwater To Marine Saline Gradient	MDITREIKDIRDALNSIEVSLQLLVAQKDGKVTSAFVSKKAISQRLNIPSVTIDKLIHQGIVSKGESGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFTYV*
Ga0136656_10071913	3300010318	Freshwater To Marine Saline Gradient	MDITREVKDIRNALNSIEISLQLLVAQKDGKVTSAFVSKKTISQRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFTYV*
Ga0129333_101489474	3300010354	Freshwater To Marine Saline Gradient	MDQLLREIKQIKEALVSIDVTLQLLVAQKEGKITSAFVSKKTIGQRLNVPSVTIDKLIHQGIVSGGSSGLVEGKHYCKVDPEERNSSKFLYDPHAVLQAAWSNFQNV*
Ga0136549_100587152	3300010389	Marine Methane Seep Sediment	MDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIVSGGESGLVEGRHYCKTDPEERNSSKFLYDPHAIMQAAWSNFKNV*
Ga0136852_121073531	3300010412	Mangrove Sediment	MDITREIRDIRDALDSIEASLQLLVAQKEGRLTSAFVSKRVVSQRLNIPSVTVDKLIHQGIVSGGESGLVESRHYCKVDPAERNSSKFLYDIHAITQAAWSNFTYV*
Ga0114922_108770521	3300011118	Deep Subsurface	MDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGKHYCKTDPEERNSSKFLYDPHAIMQAAWSNFKNV*
Ga0177922_107031422	3300013372	Freshwater	MDQTLREIKQISEALASIDTSLQLLIAQKEGKLTSAFVNKKTISQRLNVPSVTIDKLIHQGIVSGGSSGLVEGKHYCKVDPEERNSSKFLYDPHAVLQAAWKNFQNV*
Ga0181338_10013037	3300015050	Freshwater Lake	MDSALREIKQIRDAIISIDTSLQLLVSSKYSDKRTTVFVSKKVICQRLNIPTVTLDKLIFQGITSGGQSGLVQGLHYCKTDPAEQNSSKFLYDPHAIIQSAWGNFQNNV*
Ga0181357_11574482	3300017777	Freshwater Lake	MDSALREIKQIRDAIISIDTSLQLLVSSKYSDKRTTVFVSKKVICQRLNIPTVTLDKLIFQGITSGGQSGLVQGLHYCKTDPAEQNSSKFLYDPHAII
Ga0181355_10216934	3300017785	Freshwater Lake	MDQTLREIKQISEALASIDTSLQLLIAQKEGKFTSAFVNKKTISQRLNVPSVTIDKLIHQGIVSGGSSGLVEGKHYCKVDPEERNSSKFLYDPHAVLQAAWKNFQNV
Ga0181361_1024763	3300019783	Freshwater Lake	MDSALREIKQIRDAIISIDTSLQLLVSSKYSDKRTTVFVSKKVICQRLNIPTVTLDKLIFQGITSGGQSGLVQGLHYCKTDPAEQNSSKFLYDPHAIIQSAWGNF
Ga0211729_100686236	3300020172	Freshwater	MDQTLKEIKTIREALTSIDISLQLLVSQKEGKVTSAFVSKKTLGQRLNIPSVAIDKLIHQGIVSGGSSGLVEGKHYCKVEPTERNSSKFLYDPHAVMEAAWKNFTYV
Ga0211731_1047214513	3300020205	Freshwater	MDQTLKEIKTIREALTSIDISLQLLVSQKEGKVTSAFVSKKTLGQRLNIPSVAIDKLIHQGIVSGGSSGLVEGKHYCKVEPTERTSSKFLYDPHAVMEAAWKNFTYV
Ga0213864_100050712	3300021379	Seawater	MDITREIKDIRDALNSIEISLQLLVTQKDGKITTAFVSKKAISQRLNIPSVTIDKLIHQGIVSGGESGLVEKKHYCKVDPTERNSSKFLYDLHAIMQAAWSNFTYV
Ga0212029_10333982	3300022063	Aqueous	MDITREIKDIRDALNSIETSLQLLVAQKEGKITSAFVSKKVISQRLNVPAVTVDKLIHQGIASGGDSGLVEGKHYCKVDPTERNSSKFLYDLHAIMQAAWSNFTYV
Ga0212020_10160823	3300022167	Aqueous	MDITREIKDIRDALNSIEISLQLLVAQKDGKATTAFVSKKVISQRLNIPSVTVDKLIHQGIVSKGESGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFTYV
Ga0196905_10068763	3300022198	Aqueous	MNEHLTHLKNIQKALESIDISLQILVAQKDGKITSAFVSKKTVSQRLSVPSVTIDKLIHQGIVSGGESGLVESRHYCKTDPSERNSSKFLYDINAIMQAAWSNFTYV
Ga0196905_10749561	3300022198	Aqueous	REIKDIRDALNSIETSLQLLVAQKEGKITSAFVSKKVISQRLNVPAVTVDKLIHQGIASGGDSGLVEGKHYCKVDPTERNSSKFLYDLHAIMQAAWSNFTYV
Ga0196901_10532163	3300022200	Aqueous	MDITREIKDIRNALNSIEISLQLLVAQKDGKVTSAFVSKKTISQRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFTYV
Ga0196901_11191791	3300022200	Aqueous	MDITREIKDIRDALNSIETSLQLLVAQKEGKITSAFVSKKVISQRLNVPAVTVDKLIHQGIASGGDSGLVEGKHYCKVDPTERNSSKFL
Ga0196901_12557392	3300022200	Aqueous	MDQTLKEIKSIREALSSIDISLQLLVAQKEGRATSAFVSKKAISERLNIPSVAIDKLIHQGIASKGESGLVEGKHYCKADPAERNSSKFLYDPHAVMNAAWKNFT
Ga0181351_10013202	3300022407	Freshwater Lake	MDQTLREIKQISEALASIDTSLQLLIAQKEGKLTSAFVNKKTISQRLNVPSVTIDKLIHQGIVSGGSSGLVEGKHYCKVDPEERNSSKFLYDPHAVLQAAWKNFQNV
Ga0208004_10102314	3300025630	Aqueous	MDQTLKEIKSIREALSSIDISLQLLVAQKEGRATSAFVSKKAISERLNIPSVAIDKLIHQGIASKGESGLVEGKHYCKADPAERNSSKFLYDPHAVMNAAWKNFTYV
Ga0208161_11332082	3300025646	Aqueous	MDITREIKDIRDALNSIEISLQLLVAQKDGKVTSAFVSKKTISQRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFTYV
Ga0208795_10853873	3300025655	Aqueous	EIKDIRDALNSIEISLQLLVSQKDGKVTSAFVSKKSISQRLNIPSVTIDKLIHQGIVSGGESGLVEGKHFCKVDPLERNSSKFLYDPHAIMQAAWSNFNYG
Ga0208898_10358572	3300025671	Aqueous	MDITREIKDIRDALSSIEISLQLLVAQKDGKVTSAFVSKKAIGQRLNIPSVTIDKLIHQGIVSGGDSGLVEGKHYCKVDPAERNSSKFLYDPHEVMQAAWSNFTYV
Ga0208898_11522472	3300025671	Aqueous	SIETSLQLLVAQKEGKITSAFVSKKTVSQRLNIPSVTIDKLIHQGIVSKGESGLVESRHYCKVDPTERNSSKFLYDLHEITQAAWSNFIYV
Ga0208162_11192682	3300025674	Aqueous	GRGEPLPHSMETTREIKDIRDALNSIETSLQLLVAQKDGKVTSAFVSKKTVSQRLNIPSVTVDKLIHQGIVSRGDSGLIEGKHYCKVDPTERNSSKFLYDIHAITQAAWSNFTYV
Ga0208019_10041497	3300025687	Aqueous	MDITREIKDIRNALNSIETSLQLLVAQKEGRITSAFVSKKTVSQRLNIPAVTIDKLIHQGIVSQGESGLVEGKHYCRVDPTERNSSKFLFDIHAITQAAWNNFTYV
Ga0208019_10972182	3300025687	Aqueous	MDQTLKEIKSIREALSSIDISLQLLVAQKEGRVTSAFVSKKAISERLNIPSVAIDKLIHQGIASKGESGLVEGKHYCKADPAERNSSKFLYDPHAVMNAAWKNFTYV
Ga0208019_11784381	3300025687	Aqueous	MEITREIKDIRDALNSIEISLQLLVAQKDGKVTTAFVSKKTISQRLNIPSVTIDKLIHQGIVSGGDSGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFTYV
Ga0208644_100129316	3300025889	Aqueous	MDQTLKEIKSIREALTSIDISLQLLVSQKEGKVTSAFVSKKAISERLNIPSVAIDKLIHQGIASKGESGLVEGKHYCKADPAERNSSKFLYDPHAVMNAAWKNFSYV
Ga0256802_10718732	3300026492	Sediment	CLVPGGREGPLQNSMEITREIKDIRDALRSIEISLQLLVAQKDGKVTTAFVSKKAISQRLNIPSVTIDKLIHQGIVSQGESGLVEGKHYCKVDPSERNSSKFLYDPHAILQAAWSNFSYV
Ga0208975_11080292	3300027659	Freshwater Lentic	MDQTLKEIKTIREALTSIDISLQLLVSQKEGKTTSAFVSKKTISQRLNIPSVAIDKLIHQGIVSGGSSGLVEGKHYCKVDPTERNSSKFLYDPHAVMEAAWKNFTNV
Ga0209768_103696762	3300027772	Freshwater Lake	MDSALREIKQIRDAIISIDTSLQLLVSSKYSDKRTTVFVSKKVICQRLNIPTVTLDKLIFQGITSGGQSGLVQGLHYCKTDPAEQNSSKFLYDPHAIIQSAWGNFQNNV
Ga0209742_101762562	3300027814	Marine Sediment	MDITREIKDIRDALNSIEISLQLLASQKDGKITAAFVSKKAISQRLNIPAVTVDKLIHQGIISQGESGLVEGKHYCKVDPSERNSSKFLYDPHAIMQAAWSNFSYV
Ga0209066_100220826	3300027851	Watersheds	MEENLRQFKAIQRALDSIDTSLQLLVAQKNGKITAAFVSKKVISQRLNVPAVTVDKLIHQGIASGGKSGLVESVHYCKVDPEERNSSKFLFDSHAIMQAAWSNFTYV
Ga0209635_107995122	3300027888	Marine Sediment	MDITREIKDIRDALNSIEVSLQLLVSQKDGKVTSAFVSKKAISLRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFTYV
Ga0209635_112137241	3300027888	Marine Sediment	MDITREIKDIRDALNSIEISLQLLVAQKDGKITSAFVSKKAISQRLNIPSVTVDKLIHQGIVSKGESGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFTNV
Ga0209427_100993053	3300027901	Marine Sediment	MDQTLKELKEIKQALTSIDTSLQLFVSQKEGRVTSAFVSKKVISQRLNVPAVTLDKLIHQGIVSGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV
Ga0209427_102690001	3300027901	Marine Sediment	MDITREIKDIRDALNSIETSLQLLVAQKEGKITSAFVSKKVISQRLNVPAVTVDKLIHQGIASGGDSGLVEGKHYCKVDPTERNSSKFLYDLH
Ga0209427_102843302	3300027901	Marine Sediment	MDITREIKDIRDALNSIEISLQLLVAQKDGKVTSAFVSKKAIGQRLNIPSVTIDKLIHQGIVSGGDSGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFTYV
Ga0209536_1000061468	3300027917	Marine Sediment	MDITPIVKDIRDALNSIEISLQLLVAQKDGKVTTAFVSKKTISQRLNIPSVTIDKLIHQGIVSGGDSGLVEGKHYCKVDPSERNSSKFLYDPHAILQAAWSNFTYV
Ga0209536_1000598897	3300027917	Marine Sediment	MDQTLKELKEIKQALTSIDISLQLFVSQKEGRVTSAFVSKKVISQRLNVPAVTLDKLIHQGIVSGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV
Ga0209536_1006109523	3300027917	Marine Sediment	MDITREIKDIRDALNSIEISLQLLVSQKDGKVTSAFVSKKSISQRLNIPSVTIDKLIHQGIVSGGESGLVEGKHFCKVDPLERNSSKFLYDPHAIMQAAWSNFNYG
(restricted) Ga0247843_10119655	3300028569	Freshwater	MDSALREIKQIRDAITSIDTSLQLLVSSKYSDKRTTVFVSKRVICQRLNIPTVTLDKLIFQGITSGGESGLVQGLHYCRTDPAEQNSSKFLYDPHAIIQSAWSNFQNNG
Ga0307380_103539221	3300031539	Soil	IYMDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGRHYCKTDPEERNSSKFLYDPHAIMQAAWSNFKNV
Ga0307380_112784562	3300031539	Soil	SPSTIYMDQTLKELKEIKQALTSIDISLQLLVSQKEGRVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV
Ga0307379_102945813	3300031565	Soil	MDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGRHYCKTDPEERNSSKFLYDPHAIMQAAWSNFKNV
Ga0307379_106294212	3300031565	Soil	MDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGRHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV
Ga0307379_113165522	3300031565	Soil	MDQTLKELKEIKQALTSIDISLQLLVSQKEGRVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV
Ga0307378_107220152	3300031566	Soil	MDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV
Ga0307375_102855432	3300031669	Soil	MDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQSAWSNFKNV
Ga0307377_101642532	3300031673	Soil	VIKGSPSTIYMDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQSAWSNFKNV
Ga0307377_101680122	3300031673	Soil	VIKGSPSTIYMDQTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGRHYCKTDPEERNSSKFLYDPHAIMQAAWSNFKNV
Ga0307377_103630061	3300031673	Soil	QTLKELKEIKQALTSIDISLQLLVSQKEGKVTSAFVSKKVISQRLNVPAVTLDKLIHQGIASGGESGLVEGKHYCKTDPDERNSSKFLYDPHAIMQAAWSNFKNV
Ga0315291_100034979	3300031707	Sediment	MDQSLREIKQIRDALVNIDVTLQLLIAQKEGKVTSAFVNKKIISQRLNVPSVTIDKLLHQGIVSGGSSGLVEGKHYCKVDPEERNSSKFLFDPHAVMQAAWKNFQNV
Ga0315907_1000242230	3300031758	Freshwater	MDITREIKDIRDALNSIEASLQLLVAQKGGKITNAFVSKKIVSQRLNVPAVTIDKLIHQGIASKGESGLVEGRHFCKTDPTERNSSKFLYDIHAITQAAWSNFTYV
Ga0315900_102757781	3300031787	Freshwater	MDQTLKEIKTIREALTSIDISLQLLVSQKEGKTTSAFVSKKTISQRLNIPSVAIDKLIHQGIVSGGTSGLVEGKHYCKVDPTERNSSKFLYDPH
Ga0315290_108231032	3300031834	Sediment	MDQSLREIKQIRDALVNIDVTLQLLIAQKEGKVTSAFVNKKIISQRLNVPSVTIDKLLHQGIVSGGSSGLVEGKHYCKVDPEERNSSKFLFDPHAVMQA
Ga0315909_100045107	3300031857	Freshwater	MDQTLKEIKTIREALTSIDISLQLLVSQKEGKTTSAFVSKKTISQRLNIPSVAIDKLIHQGIVSGGTSGLVEGKHYCKVDPTERNSSKFLYDPHAVMEAAWKNFTNV
Ga0315909_104258211	3300031857	Freshwater	MDQTLREIKQISEALASIDTSLQLLIAQKEGKLTSAFVNKKTISQRLNVPSVTIDKLIHQGIVSGGSSGLVEGKHYCKVDPEERNSSKF
Ga0315904_101163853	3300031951	Freshwater	MDITREIKDIRDALNSIEASLQLLVAQKGGKITSAFVSKKIVSQRLNVPAVTIDKLIHQGIASKGESGLVEGRHFCKTDPTERNSSKFLYDIHAITQAAWSNFTYV
Ga0315904_103912731	3300031951	Freshwater	ISLQLLVSQKEGKTTSAFVSKKTISQRLNIPSVAIDKLIHQGIVSGGSSGLVEGKHYCKVDPTERNSSKFLYDPHAVMEAAWKNFTNV
Ga0315903_106964741	3300032116	Freshwater	MDITREIKDIRDALNSIEASLQLLVAQKGGKITSAFVSKKIVSQRLNVPAVTIDKLIHQGIASKGESGLVEGRHFCKTDPTERNSSKFLYDIHAITQAA
Ga0315903_107003142	3300032116	Freshwater	MDITREIKDIRDALNSIEASLQLLVAQKGGKITNAFVSKKIVSQRLNVPAVTIDKLIHQGIASKGESGLVEGRHFCKTDPTERNSSKFLYDIHAITQAA
Ga0334986_0003707_1974_2294	3300034012	Freshwater	MDITREIKDIRDALNSIEISLQLLVAQKDGKVTSAFVSKKTISQRLNIPSVTIDKLIHQGIVSKGESGLVEGKHYCKVDPTERNSSKFLYDPHAIMQAAWSNFTYV
Ga0348335_011291_4556_4864	3300034374	Aqueous	MDQTLKEIKSIREALSSIDISLQLLVAQKEGRATSAFVSKKAISERLNIPSVAIDKLIHQGIASKGESGLVEGKHYCKADPAERNSSKFLYDPHAVMNAAWKN
Ga0348335_051044_248_568	3300034374	Aqueous	MEITREIKDIRDALNSIETSLQLLVAQKEGKITSAFVSKKTVSQRLNIPSVTIDKLIHQGIVSKGESGLVESRHYCKVDPTERNSSKFLYDLHEITQAAWSNFIYV
Ga0348337_119792_208_528	3300034418	Aqueous	MDITREIKDIRDALNSIEVSLQLLVSQKDGKVTSAFVSKKAISLRLNIPSVTIDKLIHQGIVSGGESGLVEGKHYCKVDPAERNSSKFLYDPHAIMQAAWSNFNYV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters