Metagenome Family F085591

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085591
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	75 residues
Representative Sequence	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGTVVVWTRKRLNRPCRCTLAEWRVWAKGASKVAA
Number of Associated Samples	79
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.18 %
% of genes near scaffold ends (potentially truncated)	24.32 %
% of genes from short scaffolds (< 2000 bps)	77.48 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (21.622 % of family members)
Environment Ontology (ENVO)	Unclassified (39.640 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (37.838 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.68% β-sheet: 28.16% Coil/Unstructured: 61.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF04389	Peptidase_M28	12.61
PF00004	AAA	5.41
PF00239	Resolvase	1.80
PF04545	Sigma70_r4	1.80
PF02810	SEC-C	0.90
PF13302	Acetyltransf_3	0.90
PF01609	DDE_Tnp_1	0.90
PF13857	Ank_5	0.90
PF02796	HTH_7	0.90
PF10518	TAT_signal	0.90
PF01546	Peptidase_M20	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.80
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.80
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.90
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.90
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.90
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.90
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.90
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.27 %
Unclassified	root	N/A	29.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	29.73 %
Viruses	superkingdom	All Organisms → Viruses	3.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	29.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	53.15 %
Unclassified	root	N/A	29.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	49.55 %
Unclassified	root	N/A	29.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	45.95 %
Unclassified	root	N/A	29.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.83 %
Verrucomicrobia bacterium ADurb.Bin118	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	17.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.83 %
Verrucomicrobia bacterium ADurb.Bin118	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	17.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.83 %
Verrucomicrobia bacterium ADurb.Bin118	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	17.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Paludisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.83 %
Verrucomicrobia bacterium ADurb.Bin118	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	17.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.60 %
Paludisphaera borealis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_105234639	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300001213\|JGIcombinedJ13530_108035635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300005836\|Ga0074470_10016357	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300006642\|Ga0075521_10216230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	912	Open in IMG/M
3300006795\|Ga0075520_1085999	All Organisms → Viruses → Predicted Viral	1447	Open in IMG/M
3300009166\|Ga0105100_10874303	Not Available	559	Open in IMG/M
3300009502\|Ga0114951_10078779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1913	Open in IMG/M
3300009548\|Ga0116107_1068948	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300009548\|Ga0116107_1155353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300009552\|Ga0116138_1223958	Not Available	520	Open in IMG/M
3300009644\|Ga0116121_1115998	Not Available	842	Open in IMG/M
3300009644\|Ga0116121_1260753	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	555	Open in IMG/M
3300009645\|Ga0116106_1220098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300009669\|Ga0116148_1018099	All Organisms → Viruses → Predicted Viral	4764	Open in IMG/M
3300009669\|Ga0116148_1046642	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300009764\|Ga0116134_1197950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	700	Open in IMG/M
3300009870\|Ga0131092_10042402	All Organisms → cellular organisms → Bacteria	6319	Open in IMG/M
3300010352\|Ga0116247_10810053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300010391\|Ga0136847_11771810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2671	Open in IMG/M
3300012208\|Ga0137376_10632370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	925	Open in IMG/M
3300012923\|Ga0137359_10653883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	919	Open in IMG/M
(restricted) 3300013138\|Ga0172371_10704749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300014153\|Ga0181527_1026401	All Organisms → cellular organisms → Bacteria → PVC group	3572	Open in IMG/M
3300014155\|Ga0181524_10253312	Not Available	826	Open in IMG/M
3300014156\|Ga0181518_10034085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	3248	Open in IMG/M
3300014158\|Ga0181521_10156755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	1300	Open in IMG/M
3300014158\|Ga0181521_10300042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	825	Open in IMG/M
3300014159\|Ga0181530_10145770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1356	Open in IMG/M
3300014159\|Ga0181530_10321210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	806	Open in IMG/M
3300014162\|Ga0181538_10168103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1248	Open in IMG/M
3300014162\|Ga0181538_10252509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	971	Open in IMG/M
3300014164\|Ga0181532_10392973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300014200\|Ga0181526_10898197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300014490\|Ga0182010_10113746	All Organisms → Viruses → Predicted Viral	1367	Open in IMG/M
3300014490\|Ga0182010_10445710	Not Available	710	Open in IMG/M
3300014491\|Ga0182014_10007434	All Organisms → cellular organisms → Bacteria	11490	Open in IMG/M
3300014491\|Ga0182014_10164091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1238	Open in IMG/M
3300014496\|Ga0182011_10991270	Not Available	521	Open in IMG/M
3300014498\|Ga0182019_10499630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300014502\|Ga0182021_10448839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1534	Open in IMG/M
3300014502\|Ga0182021_11907603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300014839\|Ga0182027_10085028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3847	Open in IMG/M
3300014839\|Ga0182027_10208066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	2264	Open in IMG/M
3300014839\|Ga0182027_11085292	Not Available	813	Open in IMG/M
3300014839\|Ga0182027_12310545	Not Available	508	Open in IMG/M
3300017931\|Ga0187877_1005196	All Organisms → cellular organisms → Bacteria	9650	Open in IMG/M
3300017935\|Ga0187848_10064739	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300017935\|Ga0187848_10319907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300017940\|Ga0187853_10164178	Not Available	1057	Open in IMG/M
3300018004\|Ga0187865_1232254	Not Available	620	Open in IMG/M
3300018014\|Ga0187860_1099598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1324	Open in IMG/M
3300018014\|Ga0187860_1311693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300018019\|Ga0187874_10012115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	4901	Open in IMG/M
3300018022\|Ga0187864_10327503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300018040\|Ga0187862_10508794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	723	Open in IMG/M
3300018090\|Ga0187770_11739719	Not Available	510	Open in IMG/M
3300021520\|Ga0194053_10151888	Not Available	942	Open in IMG/M
3300021602\|Ga0194060_10609073	Not Available	504	Open in IMG/M
3300022524\|Ga0224534_1032277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1240	Open in IMG/M
3300023090\|Ga0224558_1009180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6258	Open in IMG/M
3300023091\|Ga0224559_1008633	All Organisms → cellular organisms → Bacteria	4606	Open in IMG/M
3300025327\|Ga0209751_11177964	Not Available	563	Open in IMG/M
3300025708\|Ga0209201_1013039	All Organisms → cellular organisms → Bacteria	4772	Open in IMG/M
3300025708\|Ga0209201_1031912	All Organisms → cellular organisms → Bacteria	2460	Open in IMG/M
3300025865\|Ga0209226_10111169	Not Available	1243	Open in IMG/M
3300025878\|Ga0209584_10164089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300025888\|Ga0209540_10248794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1032	Open in IMG/M
3300027815\|Ga0209726_10231016	Not Available	949	Open in IMG/M
3300027896\|Ga0209777_10649918	Not Available	757	Open in IMG/M
3300029798\|Ga0239581_1078006	Not Available	701	Open in IMG/M
3300030007\|Ga0311338_11794773	Not Available	553	Open in IMG/M
3300031234\|Ga0302325_10375087	Not Available	2238	Open in IMG/M
3300031236\|Ga0302324_103107206	Not Available	549	Open in IMG/M
3300031525\|Ga0302326_10914631	Not Available	1246	Open in IMG/M
3300031525\|Ga0302326_10970523	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	1198	Open in IMG/M
3300031834\|Ga0315290_10312081	Not Available	1377	Open in IMG/M
3300031834\|Ga0315290_11097813	Not Available	665	Open in IMG/M
3300031873\|Ga0315297_10391249	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300031997\|Ga0315278_10380005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	1459	Open in IMG/M
3300031997\|Ga0315278_11319127	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	702	Open in IMG/M
3300031997\|Ga0315278_11755276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300031997\|Ga0315278_12105955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	524	Open in IMG/M
3300032018\|Ga0315272_10401303	Not Available	676	Open in IMG/M
3300032018\|Ga0315272_10651125	Not Available	534	Open in IMG/M
3300032118\|Ga0315277_10002015	All Organisms → cellular organisms → Bacteria	28647	Open in IMG/M
3300032143\|Ga0315292_11381495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300032164\|Ga0315283_10693570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	1097	Open in IMG/M
3300032164\|Ga0315283_11670175	Not Available	646	Open in IMG/M
3300032173\|Ga0315268_12394837	Not Available	542	Open in IMG/M
3300032173\|Ga0315268_12695410	Not Available	510	Open in IMG/M
3300032177\|Ga0315276_12064545	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	580	Open in IMG/M
3300032256\|Ga0315271_10212075	Not Available	1556	Open in IMG/M
3300032256\|Ga0315271_11055962	Not Available	702	Open in IMG/M
3300032275\|Ga0315270_10570721	Not Available	734	Open in IMG/M
3300032275\|Ga0315270_10638738	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300032342\|Ga0315286_10327104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	1620	Open in IMG/M
3300032397\|Ga0315287_10745061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	1155	Open in IMG/M
3300032397\|Ga0315287_11178055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300032397\|Ga0315287_12621274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	538	Open in IMG/M
3300032805\|Ga0335078_12734891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300032829\|Ga0335070_10676731	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	966	Open in IMG/M
3300032897\|Ga0335071_11031210	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	769	Open in IMG/M
3300032897\|Ga0335071_11286674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300033402\|Ga0326728_10011470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	20213	Open in IMG/M
3300033402\|Ga0326728_10037980	All Organisms → cellular organisms → Bacteria	7674	Open in IMG/M
3300033402\|Ga0326728_10102947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin118	3429	Open in IMG/M
3300033405\|Ga0326727_10176499	All Organisms → Viruses → Predicted Viral	2420	Open in IMG/M
3300033755\|Ga0371489_0003146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	20213	Open in IMG/M
3300033755\|Ga0371489_0009445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9185	Open in IMG/M
3300034125\|Ga0370484_0184080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.59%
Engineered	Engineered	5.41%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	57.66%
Terrestrial	Environmental → Terrestrial	36.94%
Wastewater	Engineered → Wastewater	5.41%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	54.95%
Soil	Environmental → Terrestrial → Soil	24.32%
Peat	Environmental → Terrestrial → Peat	12.61%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	4.50%
Marine	Environmental → Aquatic → Marine	1.80%
Sediment	Environmental → Aquatic → Sediment	0.90%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.90%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	27.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.23%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.31%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	4.50%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%
Loam	Environmental → Terrestrial → Soil → Loam	0.90%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	22.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.50%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.50%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	4.50%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.90%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	21.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.01%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	9.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.31%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.41%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.50%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.50%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	4.50%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.70%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.80%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.80%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.90%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.90%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010352	AD_JPHWca	Engineered	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300013138 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12m	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300029798	Freshwater lake microbial communities from Alinen Mustajarvi, Finland - AM11	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1052346391	3300001213	Wetland	MRNPRINPRPGDRLAKVLTNRAGVTGVFSRRVLVLEQHGPRTTTVIWTRKRPDRPCRCTLTEWRAWAENAIVAAA*
JGIcombinedJ13530_1080356352	3300001213	Wetland	MRNPRINPRPGDRLAKVLTNHAGVTGVFSRRVLALEKRFPDGLVVVWTRKRSNHPCRCTLPEWREWAKRASKPAA*
Ga0074470_100163571	3300005836	Sediment (Intertidal)	MKKTQMNKRHRDPRRNPRPGDRLAKILTSRAGVSGVFCRRVLALEQRYRDGIIVVWTRKRSNQPCRCTLAQWRAWAKHASKPAETSHRRL*
Ga0075521_102162302	3300006642	Arctic Peat Soil	MRDPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALERRFPNHIVVVWTRKRHNRPCRCTLAEWRAWAKSASKVAEQPCRR*
Ga0075520_10859993	3300006795	Arctic Peat Soil	MRDPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALERRFPNHIVVVWTRKRDNRPCRCTLAEWRAWAKSAS*
Ga0105100_108743032	3300009166	Freshwater Sediment	MRDPRTNPRPGDRLAKVLTNRAGVSCVITRRVLALEKLYPNRIVVVWTRKRPDRPCRSTLSEWRRWANTALKVAD*
Ga0114951_100787792	3300009502	Freshwater	MRNPRINPRPGDRLAKILTNRAGVKGVFSRRVLALEKRYPNSTTVVWTRKRSNRPCRCTLSE*
Ga0116107_10689482	3300009548	Peatland	MAMRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLTLEKRFPDGIVVVWTRKRSNHPCRCTLREWRVWAKTASRVAA*
Ga0116107_11553532	3300009548	Peatland	MRDPRINPRPGDRLAKVLTNRAGVTGVFSRRVLALERRFPNRKVVVWTRKRHNRPCRCTLAEWRAWAK
Ga0116138_12239582	3300009552	Peatland	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALETRYPRGTTVVWTHKRSNRPCRCTLREWRAWAKKASKVNP*
Ga0116121_11159981	3300009644	Peatland	NPQPGDRLAKIQTNRAGVSGVFSRHVLALEKRFPGGIVVVWTRKRLNRPCRCTLREWRAWAKKASKVTS*
Ga0116121_12607532	3300009644	Peatland	GDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGTVVVWTRKRLNRPCRCTLAEWRVWAKGASKVAA*
Ga0116106_12200982	3300009645	Peatland	LAKVLTNRAGVSGVFSRRVLALEKRFPDGTVVVWTRKQLNRPCRCTLAEWRVWAKGASKVAA*
Ga0116148_10180995	3300009669	Anaerobic Digestor Sludge	MRNPRINPRPGDRLARILTNRAGVTGVFSRRVLALEKRFPDGLVVVWTRKRSDHPCRCTLPEWQAWAKSASKPAA*
Ga0116148_10466424	3300009669	Anaerobic Digestor Sludge	MRDPRINPRPGDRLAKVLTNHTGVTGVFSRRVLALEKRFPDGLVVVWTRKRSNRPCRCSLKEWRRWAKSASKPAA*
Ga0116134_11979502	3300009764	Peatland	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGTVVVWTRKRLNRPCRCTLAEWRVWAKGASKVAA*
Ga0131092_100424028	3300009870	Activated Sludge	MRDPRTNPQPGDRLAKVLTSRAGVSGVFSRRVLALEQRFPDGLVVVWTRKRSTQPCRCTLAQWRQWAKHASIAAK*
Ga0116247_108100532	3300010352	Anaerobic Digestor Sludge	MRNPRINPRPGDRLAKVLTSRAGVTGVFSRRVLVLERRYPHSTTVVWTRKCPDRPCHCTLTEWRTWAKHAIVAA
Ga0136847_117718106	3300010391	Freshwater Sediment	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGIVVVWTRKRSSQPCRCTLTGWRQWAKNASKVAEHSSRRL*
Ga0137376_106323702	3300012208	Vadose Zone Soil	MRNPRINPRPGDRLAKVLTNRAGVSCVFSRRVLAVEKSYPRTITVVWTRKRSSNPCRCTPVEWRAWAKNASRVAEL*
Ga0137359_106538832	3300012923	Vadose Zone Soil	MRNPRTHPRPGDRLAKLATNRAGVSGVFSRRVLALEKRFPDGIVVVWTRKRSTHPCRCTLRDWRAWAKSASKPAA*
(restricted) Ga0172371_107047492	3300013138	Freshwater	MRNPRVNPRPGDKLAKVLTNRAGVSGVFTRRVLALEKRHPRSVTVVWTRKHPDHPCRCTLAEWR
Ga0181527_10264012	3300014153	Bog	MRNPRINPRPGDRLVKVLTNRAGVTGVFSRRVLALERRFPNRKVVVWTRKRHNRPCRCTLAEWRAWAKNASNVAK*
Ga0181524_102533122	3300014155	Bog	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGTVVVWTRKRLNRPCRCTLAEWRVWAKSASKVAAKPLRNC
Ga0181518_100340852	3300014156	Bog	LAKVLTNRAGVSGVFSRRVLALEKHFPDGTVVVWTRKRLNRPCRCTLAEWRVWAKGASKVAA*
Ga0181521_101567552	3300014158	Bog	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKHFPDGTVVVWTRKRLNRPCRCTLAEWRVWAKGASKVAA*
Ga0181521_103000422	3300014158	Bog	MRNSRINPRPGDRLAKVLTNRAGVTGVFSRRVLALERRFPDSIIVVWTRKRDNRPCRCTLGEWRA*
Ga0181530_101457702	3300014159	Bog	MRNPRLNPRPGDRLAKILTNRAGVTGVFSRRVLALERLYPRSTTVVWTRKRHNRPCRCTLAEWRAWAKNASNVARHSYRR*
Ga0181530_103212101	3300014159	Bog	PRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGTVVVWTRKRSNHPCRCTLREWRAWAKSASKPAA*
Ga0181538_101681033	3300014162	Bog	MRDPRINPRRGDRLVRILTNRAGVPGVFSRRVLALEKRFPEGIVVVWTHKRSNRPCRCTLREWRAWAKKASKVNP*
Ga0181538_102525091	3300014162	Bog	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGTVVVWTRKRLNRPCRCTLAEWRVWAKSASKVAAKPLCNCRENQPV*
Ga0181532_103929732	3300014164	Bog	MRDPRINPRPGDRLVRILTNRAGVSGVFSRRVLALEKRFPEGIVVVWTHKRSNRPCRCTLREWRAWAKKASKVNP*
Ga0181526_108981972	3300014200	Bog	MRDPRINPRPGDRLARILTNRAGVSGVFSRRVLALEKRFRGGIVVVWTRKRRNHPCRCTLTEWRRWAKTSKVAE*
Ga0182010_101137462	3300014490	Fen	MRSPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKLYPRGTTVVWTRKRSDRPCRCTLREWRAWAKSASKVAGHSYRR*
Ga0182010_104457101	3300014490	Fen	RLAKILTNRAGVSGVFSRRVLALERRFPNSIVVVWTRKRSNRPCRCTLAEWRAWAKNASNVAGHSYRR*
Ga0182014_100074347	3300014491	Bog	MRNPRINPRPGDRLAKVLTNRAGVKGVFSRRVLALERRFPNHIVVVWTRKRHNRPCRCTLGECRAWAKSANVPADWRCRK*
Ga0182014_101640912	3300014491	Bog	MNPRPGDRLAKILTNRAGVKGVFSRRVLALERLYPRSTTVVWTRKQSNRPCRCTLAEWRAWAKNASKVAGQSYRR*
Ga0182011_109912702	3300014496	Fen	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKLYPRGTTVVWTRKRSDRPCRCTLREWRAWAKSASKVAGHSYRR*
Ga0182019_104996302	3300014498	Fen	MRSPRINPRPGDRLAKVLTNRAGVKGVFSRRVLALERRFPDRIVVVWTRKRPNRPCRCTLSEWQAWAKSASKV
Ga0182021_104488393	3300014502	Fen	MRNPRINPRPGDRLAKLLTNRAGVTGVFSRRVLALEKGSPNGAIVVWTRKRPEHPCRSTLIEWRAWAKNAHVAAN*
Ga0182021_119076032	3300014502	Fen	MRNPRINPHPGDRLAKVLTNRAGITGVFSRHVMVLEKHYPRTTTVVWTRKRPDRPCRCTL
Ga0182027_100850287	3300014839	Fen	MRNPRINPHPGDRLAKVLTNRVGVTGVFSRRVLVLEKRHSRTTIVVWTRKRPDRPCRCTLTVWRAWAKHAIVAAN*
Ga0182027_102080664	3300014839	Fen	MRSPRINPRPGDRLAKVLTNRAGVKGVFSRRVLALERRFPDRIVVVWTRKRPNRPCRCTLSEWRAWAKSASKVAA*
Ga0182027_110852921	3300014839	Fen	MAKILTNRAGVSGVFSRLVLALERRFPNSIVVVWTRKRHNRPCRCTLAEWRVWAKNASNVAGHSYHR*
Ga0182027_123105452	3300014839	Fen	MRNPRINPRPGDRLAKVLTNRAGVTGVFSRRVLALERRFPDTTNVVWTRKRHNRPCRCTLAEWRAWAKNASKVAEHSYRR*
Ga0187877_10051964	3300017931	Peatland	MAMRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLTLEKRFPDGIVVVWTRKRSNHPCRCTLREWRVWAKTASRVAA
Ga0187848_100647393	3300017935	Peatland	MMRNPRINPRPGDRLAKVLTNRAGVSGVFSRLVLALEKRFPGGIVVVWTRKRSNRPCRCTLRQWRVWAKKASKVAKLSYRK
Ga0187848_103199072	3300017935	Peatland	MRNPRINPRPGDRLVKVLTNRAGVTGVFSRRVLALERRFPNRKVVVWTRKRHNRPCRCTLAEWRAWAKNASNVAK
Ga0187853_101641783	3300017940	Peatland	MAMRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGTVVVWTRKRLNRPCRCTLAEWRVWAKGASKVAA
Ga0187865_12322542	3300018004	Peatland	MRDPRINPRPGDRLAKILTNRAGVSGVFSRRVLALEKRYPRSTTVVWTRKRSTQPCRCTLTEWRAWAKTPAVAAD
Ga0187860_10995981	3300018014	Peatland	MRDPRINPRPGDRLVRILTNRAGVSGVFSRRVLALEKRFPEGIVVVWTHKRSNRPCRCTLRE
Ga0187860_13116932	3300018014	Peatland	MRDPRINPHPGDRLAKILTNRAGVSGVFSRRVLALETHYPRSTTVVWTRKRPNRPCRCTLTEWRAWAKNA
Ga0187874_100121151	3300018019	Peatland	MRDPRINPRPGDRLAKVLTNRAGVKGVFSRRVLALERRFPDRIVVVWTRKRPNRPCRCTLSEWREWAKSASKVAA
Ga0187864_103275032	3300018022	Peatland	MRNPRINPRPGDRLVKVLTNRAGVTGVFSRRVLALERRFPNRKVVVWTRKRHNRPCRCTLAEWRAWAKNASNVARHSYRR
Ga0187862_105087942	3300018040	Peatland	MRDPRINPRPGDRLVRILTNRAGVSGVFSRRVLALEKRFPEGIVVVWTHKRSNRPCRCTLREWRAWAKKASKVNP
Ga0187770_117397192	3300018090	Tropical Peatland	MTQPKRMRNPRINPRPGDRLVKVLTNRGGVTGVFSRRVLSLEQRFGGGIVVVWTRKRPDNPCRCTLREWRAWAKTASRP
Ga0194053_101518883	3300021520	Anoxic Zone Freshwater	MRNPRINPRPGDRLAKILTNRAGVKGVFSRRVLALEKRYPNSTTVVWTRKHSNRPCRCTLKEWRAWAKNASKVAER
Ga0194060_106090731	3300021602	Anoxic Zone Freshwater	MRNPRINPRPGDRLAKLLTNRVGVTGVFSRRVLAVEKSYPRRTTVIWTRKRPERPCRCTLDEWRAWAKNA
Ga0224534_10322772	3300022524	Soil	MRNPRMNPRPGDRLAKILTNRAGVKGVFSRRVLALERLYPRSTTVVWTRKQSNRPCRCTLAEWRAWAKNASKVAGQSYRR
Ga0224558_100918010	3300023090	Soil	MRSPRINPRPGDRLAKVLTNRAGVKGVFSRRVLALERRYPRSTTVVWTRKHPNRPCRCTLGEWRAWARSASKVAA
Ga0224559_10086337	3300023091	Soil	IMRNPRINPRPGDRLAKVLTNRAGVKGVFSRRVLALERRFPNHIVVVWTRKRHNRPCRCTLGECRAWAKSANVPADWRCRK
Ga0209751_111779642	3300025327	Soil	RDPRIHPRPGDRLAKLLTNRSGVRGVFSRRVLALEKRFPHGTTVVWTRKRPSQPCRCTLTEWRAWAKNASKVADNSYRRL
Ga0209201_10130393	3300025708	Anaerobic Digestor Sludge	MRNPRINPRPGDRLARILTNRAGVTGVFSRRVLALEKRFPDGLVVVWTRKRSDHPCRCTLPEWQAWAKSASKPAA
Ga0209201_10319122	3300025708	Anaerobic Digestor Sludge	MRDPRINPRPGDRLAKVLTNHTGVTGVFSRRVLALEKRFPDGLVVVWTRKRSNRPCRCSLKEWRRWAKSASKPAA
Ga0209226_101111692	3300025865	Arctic Peat Soil	MRNPRINPRPGDRLAKVLTNRAGVTGVFSRRVLVLEKRHPRTTIVVWTRKRPDWPCRCALTEWRAWAEHAIVAAD
Ga0209584_101640891	3300025878	Arctic Peat Soil	MRDPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALERRFPNHIVVVWTRKRHNRPCRCTLAEWRAWAKSASKVAEQPCRR
Ga0209540_102487943	3300025888	Arctic Peat Soil	MRNPRINPRPGDRLAKLLTNRVGVTGVFSRRVLVLEKRYPRTTTVVWTRKRPDQPCRCTLTEWRAWAKHAIVAAN
Ga0209726_102310162	3300027815	Groundwater	VCDPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEQRFPDGTVVVWTRKRDNQPCRCTLSEWRAWAKNVSKVAEHSYRKS
Ga0209777_106499182	3300027896	Freshwater Lake Sediment	MRNPRINPHPGDRLAKLLTNRAGVTGVFSRRVLVLEKRYPRTTTVVWTRKRPDRPCRCTLTEWRAWAKHAIVAAL
Ga0239581_10780062	3300029798	Freshwater Lake	MRNPRINPRPGDRLAKILTNRAGVKGVFSRRVLALEKRYPNSTTVVWTRKHSNRPCRCTLDEWRAWAKNTSKVAER
Ga0311338_117947732	3300030007	Palsa	MRNPRINPRPGDRLAKVLTNRARVSGVFSRTVLALEKHFPDSVVVVWTRKRRNRPCRCTLTEWRLWAKTSKVAE
Ga0302325_103750872	3300031234	Palsa	MAMRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKHYPDSVVVVWTRKRRNRPCRCTLTEWRLWAKTSKVAE
Ga0302324_1031072061	3300031236	Palsa	PGDRLARVLTNRAGVSGVFSRTVLALEKHFPDSIVVVWTRKRRNQPCRCTLSEWRLWAKKSEVAE
Ga0302326_109146312	3300031525	Palsa	MATRNPRINPRPGDRLARVLTNRAGVSGVFSRTVLALEKHFPDSIVVVWTRKRRNQPCRCTLSEWRLWAKKSEVAE
Ga0302326_109705233	3300031525	Palsa	MAMRNPRINPRPGDRLAKVLTNRARVSGVFSRTVLALEKHFPDSVVVVWTRKRRNRPCRCTLTEWRLWAKTSKVAE
Ga0315290_103120813	3300031834	Sediment	MAMRDPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKRSNRPCRCTLSEWRLWAKTASKVAER
Ga0315290_110978132	3300031834	Sediment	MRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKHPNRPCRCTLSEWRVWAKTASKVAERLHRR
Ga0315297_103912492	3300031873	Sediment	MAMRDPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKRSNRPCRCTLSEWRLWAKTASKVAA
Ga0315278_103800052	3300031997	Sediment	MAMRDPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKRSNRPCRCTLSEWRLWAKSASKVAER
Ga0315278_113191273	3300031997	Sediment	TCTIMRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKHPNRPCRCTLSEWRVWAKTASKVAERLHRR
Ga0315278_117552762	3300031997	Sediment	MRDPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALERRYPRSTTVVWTRKHPNRPCRCTLREWRLWAKTASKVAER
Ga0315278_121059552	3300031997	Sediment	MRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLAIEKRYPRSTTVVWTRKRSDHPCRCTLSQWRAWAKTASKVAG
Ga0315272_104013032	3300032018	Sediment	MKKTLLPMRQRDPRRNPRPGDRLAKVLTNRAGVSGVFSRRVLALEPRFPDGTVVVWTRKRSNQPCRCPLAAWRTWAKNASKVAENSYRRL
Ga0315272_106511251	3300032018	Sediment	MRNPRINPHPGDRLAKLLTNRAGVTGVFSRRVLVLERRYPRPTTVVWTRKRPDRPCRCTLTEWRAWAKHAIVAAL
Ga0315277_100020159	3300032118	Sediment	MRDPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGIVVVWTRKRPNQPCRCTLAAWRKWAKNASKVAEHSHRRL
Ga0315292_113814951	3300032143	Sediment	MRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKRSNRPCRCTLSEW
Ga0315283_106935702	3300032164	Sediment	MAMRDPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKRSNRPCRCTLSEWRLWAKSASKAAER
Ga0315283_116701752	3300032164	Sediment	MRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKRSNRPCRCTLSEWRVWAKTASKVAER
Ga0315268_123948372	3300032173	Sediment	MSERQRDPRRNPRPGDRLGKVLTNRAGVSGVFSRHVLALEQRYRDGTVVVWTRKCPNQPCRCTLAAWRQWAKYASKVAEHSH
Ga0315268_126954101	3300032173	Sediment	MRNPRINPRPGDRLAKVLTNRAGVTGVFSRNVLVVEKHYPRTTTVVWTRKRPDRPCRCTLTEWRAWAKHAIVAAL
Ga0315276_120645452	3300032177	Sediment	MAMRDPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALERRYPRSTTVVWTRKRSNRPCRCTLSEWRVWAKNASKVAEHSHR
Ga0315271_102120753	3300032256	Sediment	MKKTLMSERQRDPRRNPRPGDRLGKVLTNRAGVSGVFSRHVLALEQRYRDGTVVVWTRKRSNQPCRCTLAAWRQWAKYASKVAEHSYRRL
Ga0315271_110559622	3300032256	Sediment	MRNPRINPRPGDRLANVLTNRAGVTGVFSRRVLVLEKRYPRTTTVVWTRKRPDRPCCCTLTEWRAWAKHAIVAAL
Ga0315270_105707211	3300032275	Sediment	MAMRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKHPNRPCRCTLSEWRLWA
Ga0315270_106387381	3300032275	Sediment	MRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALERRYPRSTTVVWTRKRSNRPCRCTLSEWRVWAKNASKVAER
Ga0315286_103271043	3300032342	Sediment	MRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKRSNRPCRCTLREWRLWAKTASKVAEHSHRR
Ga0315287_107450611	3300032397	Sediment	MRDPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALERRYPRSTTVVWTRKHPNRPCRCTLSEWRVWAKTASKVAERLHRR
Ga0315287_111780553	3300032397	Sediment	MRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKRSNRPCRCTL
Ga0315287_126212742	3300032397	Sediment	MRNPRINPRPGDRLAKVLTNRAGMTGVYSRRVLALEKRYPRSTTVVWTRKRSNRPCRCTLSEWRVWAKNASKVAA
Ga0335078_127348912	3300032805	Soil	MRNSRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGIVVVWTRKRSNRPCRCTLREWRAWAKGASKPAA
Ga0335070_106767312	3300032829	Soil	MLNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGIVVVWTRKRSNRPCRCTLREWRAWAKSASRPAA
Ga0335071_110312101	3300032897	Soil	MRDPRTNPRPGDRLTKVLTNRAGVTGIFSRRVLALEKRLPDGVIVVWTRKRPEHPCHSTLREWKA
Ga0335071_112866742	3300032897	Soil	VTLESTLVPATAWPKILTNRAGVSGVFTRTVLALEKRYPRITTVVWTRKRPNQPCRSTLTEWRAWAKNAAVAADRRCRR
Ga0326728_100114707	3300033402	Peat Soil	MAMRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGIVVVWTRKRPNRPCRCTLTEWRAWAKGASKPAA
Ga0326728_100379804	3300033402	Peat Soil	MAMRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFSDGLVVVWTRKRSDHPCRCTLKEWRAWAKGASKPAA
Ga0326728_101029473	3300033402	Peat Soil	MRNPRTNPRPGDRLAKVLTNRAGVTRVLSRRVLALEKRYPRSTTVVWTRKRSDRPCRCTLAEWRAWAKGASKPAA
Ga0326727_101764996	3300033405	Peat Soil	RINPRPGDRLAKVLTNRAGVSGVFSRRVLALERRFPDGIVVVWTRKRHNRPCRCTLGQWRAWAKNASKVAGHSYRR
Ga0316629_113803171	3300033483	Soil	MRNPRINPRPGDRLAKVLTNHAGVTGVFSRRVLALEKRFPDGLVVVWTRKRSNRPCRCSRKE
Ga0371489_0003146_3604_3831	3300033755	Peat Soil	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFPDGIVVVWTRKRPNRPCRCTLTEWRAWAKGASKPAA
Ga0371489_0009445_7069_7296	3300033755	Peat Soil	MRNPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALEKRFSDGLVVVWTRKRSDHPCRCTLKEWRAWAKGASKPAA
Ga0370484_0184080_1_180	3300034125	Untreated Peat Soil	MRDPRINPRPGDRLAKVLTNRAGVSGVFSRRVLALERRFPNHIVVVWTRKRHNRPCRCTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters