NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F085590

Metagenome / Metatranscriptome Family F085590

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085590
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 72 residues
Representative Sequence MDYAITKRSPCSVCGLDTFRHAGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCRQHLKTLIAHWLTQ
Number of Associated Samples 98
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.89 %
% of genes near scaffold ends (potentially truncated) 97.30 %
% of genes from short scaffolds (< 2000 bps) 90.99 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(21.622 % of family members)
Environment Ontology (ENVO) Unclassified
(50.450 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.946 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.33%    β-sheet: 14.29%    Coil/Unstructured: 69.39%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF14235DUF4337 13.51
PF07998Peptidase_M54 2.70
PF01894UPF0047 2.70
PF07883Cupin_2 1.80
PF09397FtsK_gamma 1.80
PF00202Aminotran_3 0.90
PF12969DUF3857 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 2.70
COG1913Predicted Zn-dependent proteaseGeneral function prediction only [R] 2.70


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918008|ConsensusfromContig318463All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium917Open in IMG/M
3300003505|JGIcombinedJ51221_10317627All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300004091|Ga0062387_100262098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1088Open in IMG/M
3300004092|Ga0062389_101096988All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium981Open in IMG/M
3300004152|Ga0062386_101191181All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium633Open in IMG/M
3300004152|Ga0062386_101587899All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300004152|Ga0062386_101795589All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300005436|Ga0070713_100176307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1919Open in IMG/M
3300005468|Ga0070707_100597790All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.1066Open in IMG/M
3300005468|Ga0070707_101016285All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300005995|Ga0066790_10257978All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium743Open in IMG/M
3300006086|Ga0075019_10068789All Organisms → cellular organisms → Bacteria2009Open in IMG/M
3300006642|Ga0075521_10284705All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300006797|Ga0066659_10051730All Organisms → cellular organisms → Bacteria2595Open in IMG/M
3300006864|Ga0066797_1281631All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300009038|Ga0099829_10932466All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300009519|Ga0116108_1061180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1177Open in IMG/M
3300009621|Ga0116116_1059619All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1120Open in IMG/M
3300009629|Ga0116119_1125117All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300009638|Ga0116113_1180837All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300009639|Ga0116122_1016649All Organisms → cellular organisms → Bacteria2689Open in IMG/M
3300009683|Ga0116224_10095730All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1440Open in IMG/M
3300009700|Ga0116217_10282867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1070Open in IMG/M
3300009759|Ga0116101_1154702All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300009764|Ga0116134_1048469All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1631Open in IMG/M
3300009839|Ga0116223_10192362All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1250Open in IMG/M
3300010379|Ga0136449_103868583All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300011269|Ga0137392_11591715All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300012202|Ga0137363_10856767All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium771Open in IMG/M
3300012917|Ga0137395_10365391All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300012918|Ga0137396_11021365All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300014164|Ga0181532_10184103All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1234Open in IMG/M
3300014493|Ga0182016_10795918All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300016730|Ga0181515_1198440All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300016750|Ga0181505_10777793All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300017938|Ga0187854_10286279All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium707Open in IMG/M
3300017940|Ga0187853_10221703All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium877Open in IMG/M
3300017955|Ga0187817_10457147All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium815Open in IMG/M
3300017955|Ga0187817_10754279All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium621Open in IMG/M
3300017996|Ga0187891_1118677All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium975Open in IMG/M
3300017996|Ga0187891_1194453All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium695Open in IMG/M
3300018004|Ga0187865_1292424All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300018005|Ga0187878_1048270All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1936Open in IMG/M
3300018014|Ga0187860_1265023All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium677Open in IMG/M
3300018016|Ga0187880_1281646All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium722Open in IMG/M
3300018019|Ga0187874_10033509All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2516Open in IMG/M
3300018019|Ga0187874_10215703All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300018023|Ga0187889_10152374All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1095Open in IMG/M
3300018023|Ga0187889_10514578All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300018024|Ga0187881_10442534All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300018033|Ga0187867_10282732All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium931Open in IMG/M
3300018035|Ga0187875_10204345All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1089Open in IMG/M
3300018035|Ga0187875_10489220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium653Open in IMG/M
3300018037|Ga0187883_10227405All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium955Open in IMG/M
3300018040|Ga0187862_10364889All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium894Open in IMG/M
3300018046|Ga0187851_10194363All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1208Open in IMG/M
3300018047|Ga0187859_10801421All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300018057|Ga0187858_10140064All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1618Open in IMG/M
3300018085|Ga0187772_10064856All Organisms → cellular organisms → Bacteria2280Open in IMG/M
3300018086|Ga0187769_10627674All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium812Open in IMG/M
3300018090|Ga0187770_10321396All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1207Open in IMG/M
3300019082|Ga0187852_1447028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300021401|Ga0210393_11205397All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300022521|Ga0224541_1020562All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300025457|Ga0208850_1069357All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium573Open in IMG/M
3300025475|Ga0208478_1074754All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300025480|Ga0208688_1036917All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1127Open in IMG/M
3300025579|Ga0207927_1131830All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300025878|Ga0209584_10150807All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300026331|Ga0209267_1335509All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300026361|Ga0257176_1052852All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300026371|Ga0257179_1010117All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium975Open in IMG/M
3300026551|Ga0209648_10172306All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1685Open in IMG/M
3300026551|Ga0209648_10180693All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1633Open in IMG/M
3300027521|Ga0209524_1085484All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300027546|Ga0208984_1117276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300027562|Ga0209735_1063695All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300027562|Ga0209735_1094798All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium650Open in IMG/M
3300027609|Ga0209221_1014311All Organisms → cellular organisms → Bacteria2072Open in IMG/M
3300027669|Ga0208981_1107367All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium712Open in IMG/M
3300027676|Ga0209333_1116844All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium723Open in IMG/M
3300027696|Ga0208696_1139110All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium790Open in IMG/M
3300027729|Ga0209248_10081603All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium980Open in IMG/M
3300027812|Ga0209656_10364823All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium654Open in IMG/M
3300027829|Ga0209773_10196260All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium844Open in IMG/M
3300027882|Ga0209590_10878256All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium566Open in IMG/M
3300027898|Ga0209067_10106291All Organisms → cellular organisms → Bacteria1464Open in IMG/M
3300027908|Ga0209006_10892233All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium714Open in IMG/M
3300028759|Ga0302224_10252529All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium704Open in IMG/M
3300028788|Ga0302189_10033118All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2756Open in IMG/M
3300028882|Ga0302154_10625183All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300029889|Ga0246001_1086247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300029889|Ga0246001_1097112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300029952|Ga0311346_10165092All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2578Open in IMG/M
3300029956|Ga0302150_10161936All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium851Open in IMG/M
3300030507|Ga0302192_10029824All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3004Open in IMG/M
3300030617|Ga0311356_10820278All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium882Open in IMG/M
3300030659|Ga0316363_10192369All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium854Open in IMG/M
3300030706|Ga0310039_10107366All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1162Open in IMG/M
3300030706|Ga0310039_10364081All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300030740|Ga0265460_12177463All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300031090|Ga0265760_10312489All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300031234|Ga0302325_11047567All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1107Open in IMG/M
3300031247|Ga0265340_10279102All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium742Open in IMG/M
3300031754|Ga0307475_10099019All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2273Open in IMG/M
3300031754|Ga0307475_10221547All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1514Open in IMG/M
3300032160|Ga0311301_12236603All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300033822|Ga0334828_124670All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium613Open in IMG/M
3300034070|Ga0334822_024276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1379Open in IMG/M
3300034091|Ga0326724_0407479All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium719Open in IMG/M
3300034282|Ga0370492_0417409All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium544Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland21.62%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.11%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.11%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil7.21%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland7.21%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.41%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil4.50%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog4.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.60%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.70%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil2.70%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.70%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.80%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.80%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.80%
PeatEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat1.80%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.90%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.90%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.90%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.90%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009621Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150EnvironmentalOpen in IMG/M
3300009629Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100EnvironmentalOpen in IMG/M
3300009638Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10EnvironmentalOpen in IMG/M
3300009639Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300016730Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017996Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40EnvironmentalOpen in IMG/M
3300018004Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100EnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300019082Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40EnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300022521Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24EnvironmentalOpen in IMG/M
3300025457Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025475Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025480Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025579Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026371Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2EnvironmentalOpen in IMG/M
3300028882Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3EnvironmentalOpen in IMG/M
3300029889Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cmEnvironmentalOpen in IMG/M
3300029952II_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029956Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2EnvironmentalOpen in IMG/M
3300030507Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300033822Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9EnvironmentalOpen in IMG/M
3300034070Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-MEnvironmentalOpen in IMG/M
3300034091Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00NEnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Bog_all_C_028198002140918008SoilMVKREPMDYPITKRSPCSVCGLDTFGHTGWFLVVENRWLDRLKILSWHSSLAAQKDMKSVCCRQHLKTLVAHWLNQASLRLPPAHSP
JGIcombinedJ51221_1031762723300003505Forest SoilMEYQIKKRPSCAVCGLDTFRHTGWFLVVENRWLDRVKILTWHSSLACQNSMKSVCCREHLKALVSHWLSQ
Ga0062387_10026209833300004091Bog Forest SoilMDYLMTRRTPCAVCGLDTFRHAGWFLVIENRWLDRLRILSWHSSLATLKDMKSVCCHQHLKTLITHWL
Ga0062389_10109698813300004092Bog Forest SoilMNHAITSSPTVKHTACSVCGLDTFRHKGWFLVVENRWLDRLKILSWHGALATQKDMKSVCCREHLKMLIGHWLTQASLRLPPS
Ga0062386_10119118123300004152Bog Forest SoilMDYPIRKRTPCSVCGLDTFRHTGWFLVAENRWLDRLKILSWHPLLARQKNLQSVCCRQHLRTLI
Ga0062386_10158789923300004152Bog Forest SoilMPMDYPIIKRSPCSVCGLDTFRHSGWFLVVENRWLDRLKILSWHSSLAMQKDMKSVCCRQHLKTLIAHWLTQASLHLPPAHDPP
Ga0062386_10179558913300004152Bog Forest SoilMDYAITKRSPCSVCGLDTFRRTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKALIAHWLTQASLRLPPADYPALPI
Ga0070713_10017630713300005436Corn, Switchgrass And Miscanthus RhizosphereMDYAIRKRPCCTVCGLDTFRHKGWFLVIENRWYDRLKILSWHCSLASQPNMRSVCCKQHLKVIVGHWLTQASLRLPPTYI
Ga0070707_10059779013300005468Corn, Switchgrass And Miscanthus RhizosphereMDNPITKRPPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKTL
Ga0070707_10101628523300005468Corn, Switchgrass And Miscanthus RhizosphereMDYAITKRSPCTVCGLDGFRRTGWFLVVENRWLDRLKILSWHSSLATQKDMESVCCRQHLKTLIAHWLTQASLRLP
Ga0066790_1025797823300005995SoilMDPITTRRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLAAQKDMKSVCSRQHLEIIVAHWLMQASLRLSPADY
Ga0075019_1006878943300006086WatershedsMELLITKRVPCSVCGVVTFRHDGWLLLVENRWLDHLKILTWHSALATRKEIKSACCREHLKTLVAHWLDHSNSRPLFR
Ga0075521_1028470533300006642Arctic Peat SoilMDYALTKRSPCSVCGLDTFRHAGWFLVVENRWLDRLKILSWHSSLASQKGMKSVCCREHL
Ga0066659_1005173063300006797SoilMDNPITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKTIIDHWLNQASL
Ga0066797_128163123300006864SoilMDYAITKRSPCSVCGLDTFRHAGWFLVVENRWRDRLKILSWHSSLANQKDMKSVCCRQHLKTLIAHWL
Ga0099829_1093246613300009038Vadose Zone SoilMDNPITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKTLIDHW
Ga0116108_106118033300009519PeatlandMDYAITKRSPCSVCGLDTVRHTGWFLVIENRWLDRLKILSWHSSLATQKDMKSVCCRQHLKTLVSHWLSQANLRLSPGRYPPL
Ga0116116_105961913300009621PeatlandMDYPITKRAPCCVCGLDSFRHIGWFLVVENRWLDRLKILFWHSSLATQKDMKSVCCRQHLTILIAHWLNQASLRLP
Ga0116119_112511723300009629PeatlandMDYAITKRSPCSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLAAQNDMRSVCCRQHLRALIAYWLTQ
Ga0116113_118083723300009638PeatlandMDYAITKRSVCSVCGVDTFRRAGWFLVAENRWLDRLKVLSWHSSLAGQKNMKSVCCRQHLKTLL
Ga0116122_101664913300009639PeatlandMDYAITKRSPCSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLASQRDMKSVCCRQHLRALI
Ga0116224_1009573033300009683Peatlands SoilMDYLITRRTPCAVCGLETFRHTGWFLVIENRWLDRLKILSWHASLATQKDMKSVCCSQHLKTLVAHWLTQASLRFPPAHCLPLPMGSDL
Ga0116217_1028286733300009700Peatlands SoilLLIFKGTPMDYAITKRSPCSVCGIDTFRRTGWFLVVENRWFDRLKILSWHSSLAAQNDMRSVCCRQHLRAL
Ga0116101_115470213300009759PeatlandMNYAITKRFPCSVCGLDTIRHAGWFLVVENRWLDRLKILSWHSSLATQKDIKSVCCRDHLKRLIAHWLTQ
Ga0116134_104846943300009764PeatlandVCGLDTFRHSGWFLVIENRWLDRLKILSWHSSLATQKDMKSVCCNQHLKTIIAHWLTQASLRL
Ga0116223_1019236213300009839Peatlands SoilMNFPTMNYPAKNYAILRRSPCSVCGIDTFRHTGWFLVIENRWLDRLKILSWHSSLATQKDMKS
Ga0136449_10386858313300010379Peatlands SoilMDYAITKRSACSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCRQHLRALIAHWLTRATLRLP
Ga0137392_1159171513300011269Vadose Zone SoilMDNPITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKTLIDHWLNQAS
Ga0137363_1085676723300012202Vadose Zone SoilMRYPLKKRSPCSVCGLDTLRHTGWFLVVENRWLDRLKILSWHSALASQKDVKSVCCRQ
Ga0137395_1036539113300012917Vadose Zone SoilMDNPITKRSPCTVCGLDTFRHAGWFLVVENRWLDRLKVLFWHSSLASQKDMKSVCCREHLKTLI
Ga0137396_1102136513300012918Vadose Zone SoilMDNLITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKT
Ga0181532_1018410323300014164BogMDYAITERAPCSVCGLGSFRHTGWLLVIENRWLDRVKIQSWHGSPATQKDMKSVCCRQHLKTANRALVMRG*
Ga0182016_1079591813300014493BogMNYAITKRFPCSVCGLDTIRHAGWFLVVENRWLDRLKIPSWHSSLATQKDIKNVCCRDHLKRLIAHWLTQASLRLPPS
Ga0181515_119844023300016730PeatlandMDYSLMDYPITKRTPCSVCGLDTFRRTGWFLVVENRWLDRLKILSWHSSLASQNNMKSVCSR
Ga0181505_1077779313300016750PeatlandMDYSLMDYPITKRTPCSVCGLDTFRRTGWFLVVENRWLDRLKILSWHSSLASQNNMKSVCSRQHLKTLIA
Ga0187854_1028627933300017938PeatlandMDCAEERMIAMISSPIARRAPCSVCGLDTFRHKGWFLVVDNRWLDRLRILSWHPSLATQKDMKSVCCR
Ga0187853_1022170313300017940PeatlandMDYAITKRSSCSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCRQHLRALIA
Ga0187817_1045714723300017955Freshwater SedimentMKYPTMDFPTKDCAITKRSPCSVCGLDTLRHTGWFIVAENRWLDRLKILSWHSSLASQKDMKSVCCRQHLKTLITTG
Ga0187817_1075427913300017955Freshwater SedimentMDYLITKRLPCSVCGRVTFRHDGWFLVIENRWLDRLKILTWHSSLAQQKDVKSACCRQHLKTLIAHW
Ga0187891_111867723300017996PeatlandMDYSIMDYAITKRSPCSVCGLDTFRRDGWFLVVENRWLDRLKILSWHSSLAAQNDMRSVCCRQHLRALIAYWLTQASLRLPPAHYP
Ga0187891_119445323300017996PeatlandMDYAITKRSPCSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCRQHLRALIAHWLTRATLRLPPTHHPPLPIG
Ga0187865_129242423300018004PeatlandMPMDYPIIKRSSCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLAMQKDMKSVCCRQHLKTLIA
Ga0187878_104827013300018005PeatlandMPMDYPIIKRSSCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLAMQKDMKSVCCRQHLKT
Ga0187860_126502323300018014PeatlandMDYAITKRSPCSVCGLDTVRHTGWFLVIENRWLDRLKILSWHSSLATQKDMKSVCCRQHLKTL
Ga0187880_128164623300018016PeatlandMAYRITTRPQCCVCGLDTLRHAGWFLAVENRWLDRLKILAWHSSLASQKDMQSVCGREHLRTLIGHWLT
Ga0187874_1003350913300018019PeatlandMDYAITKRSPCSVCGLDTVRHTGWFLVIENRWLDRLKILSWHSSLPMQKDMKSVCCRQHLKTLIAH
Ga0187874_1021570323300018019PeatlandMDYAITKRSCCSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLASQRDMKSVCCRQHLRALIAHWLTRASL
Ga0187889_1015237413300018023PeatlandMDYAITKRSPCSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCRQHLRALIAHWL
Ga0187889_1051457823300018023PeatlandMLTFKGIAMDYALIKRLPCSVCGIDTFRRAGWFLVVENRWLDRLKILSWHSSLATQKDIKSVCCREHLKTLIA
Ga0187881_1044253413300018024PeatlandMDYSIMDYPITKRSPCSVCGLDTFRRTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCSRQHLKALIAHWLSQASLRLAPGQSPPLP
Ga0187867_1028273213300018033PeatlandMISSPIARRAPCSVCGLDTFRHKGWFLVVDNRWLDRLRILSWHPSLATQKDMKSVCCRDHLKTLIAHWLTQASLRLPPSHFAPHDP
Ga0187875_1020434513300018035PeatlandMDYSLMDYPITKRAACCVCGLDTFRHKGWFLVVENRWLDRLKILSWHSSLASQNNMKSVCSRQHLKTLIAHWLTQASLR
Ga0187875_1048922023300018035PeatlandMLTLKGIAMDYAITKRSPCSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSTLATQKDMKSVCCREHLK
Ga0187883_1022740533300018037PeatlandMDYAITKRSVCSVCGVDTFRRAGWFLVAENRWLDRLKVLSWHSSLAGQKNMKSVCCRQHLKTLLSHWLSS
Ga0187862_1036488933300018040PeatlandMDYAITRRSPCSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLASQKDMKSACCREHLRALIAHWLTRASLRLP
Ga0187851_1019436333300018046PeatlandMDYAITKRSVCSVCGVDTFRRAGWFLVAENRWLDRLKVLSWHSSLAGQKNMKSVCCRQHLKTLLSHWLSSANLRLPPA
Ga0187859_1080142113300018047PeatlandMDYAITKRSPCSVCGIDTFRRTGWFLVVENRWFDRLKILSWHSSLAAQNDMRSVCCRQHLRALIAYWLTQASLR
Ga0187858_1014006413300018057PeatlandMDYPIIKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLAMQKDMKSVCCRQHLKTLIAHWLTQASLRL
Ga0187772_1006485643300018085Tropical PeatlandMAMHYPLAKRLPCSVCGADTLWREGWFVVVENRWLDRLRILSWHSSLASRRGFKSACGRQHLK
Ga0187769_1062767413300018086Tropical PeatlandMDYAITKRSPCVVCGIDTFRRTGWFLVVENRWLDRLKILSWHSALAAQKDMKSVCCREHLKALVAHWL
Ga0187770_1032139613300018090Tropical PeatlandVDHLITKPAPCSVCGRVAFYHDGWFLLVENRWLDRLKILTWHTGLARQTDVKRACCRQHLKVLIAHWL
Ga0187852_144702813300019082PeatlandMDCAEERMIAMISSPIARRAPCSVCGLDTFRHKGWFLVVDNRWLDRLRILSWHPSLATQKDMKSVCCRDHLKTLIAHWLTQA
Ga0210393_1120539723300021401SoilMDYAITRRAPCCVCGLDTFRHTGWFLVVENRWVDRIKILSWHPALATQKDMKSVCCRQHLKTLVGHWLTQASLRLPPAHNPPLAIG
Ga0224541_102056223300022521SoilMDFAIKKRSPCSVCGLDTLRRTGWFLVIENRWLDRLKILSWHSTLATQDDMKSVCCRQHLKALIAHWLTQASLRL
Ga0208850_106935723300025457Arctic Peat SoilMDYAITKRLPCSVCNLDTFRHAGWFLVVENRWLDRLKILSWHSSLATQKDMKSVCCRQHLKTL
Ga0208478_107475413300025475Arctic Peat SoilMDYAITKRPPCSVCGLDRFRHTGWFLVVENHWLDRLKILSWHSSLASQKDMKSVCCRQHLKALIAHWLS
Ga0208688_103691733300025480PeatlandMDYAITKRSPCSVCGLDTVRHTGWFLVIENRWLDRLKILSWHSSLATQKDMKSVCCRQHLKTLVSHWLSQANLRLSPGRYPP
Ga0207927_113183013300025579Arctic Peat SoilMDYAITKRSPCSVCGLDTFRHAGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCRQHLKTLIAHWLTQ
Ga0209584_1015080713300025878Arctic Peat SoilMDYALTKRSPCSVCGLDTFRHAGWFLVVENRWLDRLRILSWHPTLAIQPEMKSVGCHQHLKALIPTG
Ga0209267_133550923300026331SoilMDNPITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKT
Ga0257176_105285223300026361SoilMDNLITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKTLIDHWLNQASLRLPPA
Ga0257179_101011733300026371SoilMRYPIKKRSPCSVCGLDTLRHSGWFLVVENRWLDRLKILSWHSALASQKDVKSVCCRQ
Ga0209648_1017230633300026551Grasslands SoilMDNPIRKNSACSVCGVDTFRHTGWFLVAENRWLDRLKILSWHPSLARQKDVQSVCCRRHLKTL
Ga0209648_1018069343300026551Grasslands SoilMDNPITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKTLIDHWLNQASLRLPPARN
Ga0209524_108548413300027521Forest SoilMNNPITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSALASQKDMKSVCCREHLKTLIDHWRNQASLRLSPAR
Ga0208984_111727613300027546Forest SoilMDNLIAKRLPCSVCGLDTFRRTGWFLVVENRWLDRLKILSWHSSLASQKNMKSVCCRQHL
Ga0209735_106369523300027562Forest SoilMNNPITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHCSLASQKDMKSVCCREHLKTLIDHWLNQASLRLPPARNPPLPMG
Ga0209735_109479813300027562Forest SoilMDNPITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKTLIDHWLNQASLR
Ga0209221_101431113300027609Forest SoilMDHPSTGCIPCAVCGLDTFRHKAWFLVVENRWLDRLKILSWHCSLALQKDMQSVCCREHLKVLIGHWLT
Ga0208981_110736723300027669Forest SoilMDYAATKRPSCSVCGLNTFRHKGWFLVIENRWFDRLKILSWHASLALQANMKSVCCRQHLKTLIAHWLTQASLRIPPT
Ga0209333_111684433300027676Forest SoilMEYRITKGTSCAVCGLDTFRHTGWFLVVENRWLDRLKILSWHRTLASQINMKSVCCREHLKALVSHWL
Ga0208696_113911013300027696Peatlands SoilMDYLITRRTPCAVCGLETFRHTGWFLVIENRWLDRLKILSWHASLATQKDMKSVCCSQHLKTLVA
Ga0209248_1008160323300027729Bog Forest SoilMDYAFTRRSPCCVCGLDTFRHAGWFLVVENRWLDRLKILSWHSSLATQKEIKSVCCRQHLKALIAHWLTQASLRLPP
Ga0209656_1036482313300027812Bog Forest SoilMDYPINKRSACAVCGLDSFRHTGWFLVVENRWLDHLKILSWHSSLASQKDMKSICCRQHLKTLIGHWLTQASLRLPPAHNPPLPM
Ga0209773_1019626023300027829Bog Forest SoilMDYLMTRRTPCAVCGLDTFRHAGWFLVIENRWLDRLRILSWHSSLATLKDMKSVCCHQH
Ga0209590_1087825613300027882Vadose Zone SoilMDNPITKRSPCTVCGLDTFRHAGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKTIIDHWLNQAS
Ga0209067_1010629133300027898WatershedsMVEKGRPMKYPTMNFPTMNFPTLDCVIKRSACAVCGLDTFRHAGWFLVVENRWYDRLKILSWHSSLASQKDMKSVCCRQHLKALIAHW
Ga0209006_1089223323300027908Forest SoilMEYAIKKRSVCAVCGLDTFRHTGWFLVVENRWFDRIKILSWHSSLAAQKDMQSVCCRQHLKALIGHWLTQASLRLPPGQNIP
Ga0302224_1025252913300028759PalsaMEYRITKGTSCAVCGLDTFRHTGWFLVVENRWLDRLKILSWHRTLASQINMKSVCCREHLKALV
Ga0302189_1003311843300028788BogMNSPIGKRLPCSVCGMDTIRHSGWFLVVENRWLDRLKILTWHSALAAQGDVKAACCRSHLKTLIAHWLTQA
Ga0302154_1062518323300028882BogMNSPIGKRLPCSVCGMDTIRHSGWFLVVENRWLDRLKILTWHSALAAQGDVKAACCRSHLKTLIAHWLTQASLGLPPTEK
Ga0246001_108624713300029889PeatMDYAITKRSCCSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLASQRDMKSVCCRQHLRALIAHWLTRASLHLPP
Ga0246001_109711213300029889PeatMTVKRGPMDYPIIKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLATQKDMKSVCCRQHLKTLIAHWLTQA
Ga0311346_1016509243300029952BogMNSPIGKRLPCSVCGMDTIRHSGWFLVVENRWLDRLKILTWHSALAAQGDVKAACCRSHLKTLIAHWLTQAS
Ga0302150_1016193613300029956BogMNSPIGKRLPCSVCGMDTIRHSGWFLVVENRWLDRLKILTWHSALAAQGDVKAACCRS
Ga0302192_1002982413300030507BogMNSPIGKRLPCSVCGMDTIRHSGWFLVVENRWLDRLKILTWHSALAAQGDVKAACCRSHLKTLIAHW
Ga0311356_1082027813300030617PalsaMDFTITKRSPCCICGLDTLRRTGWFLVIENRWLDRLKILSWHSTLATQEDMKSVCCRQHLKALIAHWLTQASLRLPPARH
Ga0316363_1019236913300030659Peatlands SoilMLTLKGIAMDYAITKRSPCSVCGIDTFRRTGWFLVIENRWLDRLKILSWHSSLATQKDMKSVCCREHLKTLIAHWLSQANLRLPPARY
Ga0310039_1010736633300030706Peatlands SoilMDYAITKRSACSVCGIDTFRRTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCRQHLRALIAHWLT
Ga0310039_1036408113300030706Peatlands SoilMDYAITKRSPCSVCGIDTFRRTGWFLVVENRWFDRLKILSWHSSLAAQNDMRSVCCRQHLRALIAYWLTQASLRLPPAHYPPLPIG
Ga0265460_1217746313300030740SoilMDYSIAKRTPCSVCGLDTFRHKGWFLVVENRWLDRLKILSWHSSLAVQKDMKSVCCRQHLKTLVAHW
Ga0265760_1031248913300031090SoilMDHAMISCPTLKRKACSVCGLDTFRHKGWFLVVENRWLDRLKILSWHSALAAQKDMKGVCCREHLKALIAHW
Ga0302325_1104756713300031234PalsaMDFAIKKRSPCSVCGLDTLRRTGWFLVIENRWLDRLKILSWHSTLATQDDMKSVCCRQHLKALIA
Ga0265340_1027910213300031247RhizosphereMNYAITKRAPCCVCGQDSYRHIGWMLVVENRWLDRLKILSWNASLATHRDIKSVCCVQHLKILIAHWLNQASLRLPPGNY
Ga0307475_1009901913300031754Hardwood Forest SoilMDNPITKRPPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHSSLASQKDMKSVCCREHLKTLIDHWLNQASLRLPPARNPP
Ga0307475_1022154733300031754Hardwood Forest SoilMDYAIRKRPCCTVCGLDTFRHKGWFLVIENRWYDRLKILSWHCSLASQPNMRSVCCKQH
Ga0311301_1223660313300032160Peatlands SoilMDYPITKRSPCSVCGLDTFRHTGWFLVVENRWLDRLKILSWHASLASQKDMKSVCCRQHLKTLVAH
Ga0334828_124670_397_6123300033822SoilMHSLMIDYPITKRLPCSVCGLDTFRRKGWFLVVENRWLDRLKILSWHSSLAVQKDMKSVCCRQHLKTLISHW
Ga0334822_024276_1161_13793300034070SoilMDYPITRRSACSVCGLDTFRHTGWFLVIENRWLDRLKILSWHSSLATQKDMKSVCCRQHLKTLIAHWLTQASL
Ga0326724_0407479_501_7193300034091Peat SoilMHSLMIDYPITKRLPCSVCGLDTFRRKGWFLVVENRWLDRLKILSWHSSLAVQKDMKSVCCRQHLKTLISHWL
Ga0370492_0417409_3_2513300034282Untreated Peat SoilMGYAISKRPRCLVCGVDTVGHAGWFLVVENEWLDRLRILSWHSSLAMEKDIKSVCCRDHLRTLMAHWLSQANLRLPPAPSLAG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.