Metagenome / Metatranscriptome Family F085556

Overview

Basic Information

• Family ID: F085556
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 111
• Average Sequence Length: 53 residues
• Representative Sequence: MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKG
• Number of Associated Samples: 82
• Number of Associated Scaffolds: 111

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Viruses
• % of genes with valid RBS motifs: 81.08 %
• % of genes near scaffold ends (potentially truncated): 100.00 %
• % of genes from short scaffolds (< 2000 bps): 92.79 %
• Associated GOLD sequencing projects: 65
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: environmental samples (76.577 % of family members)
• NCBI Taxonomy ID: 186616
• Taxonomy: All Organisms → Viruses → environmental samples

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (75.676 % of family members)
• Environment Ontology (ENVO): Unclassified (98.198 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (95.495 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 59.21%
  β-sheet: 0.00%
  Coil/Unstructured: 40.79%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03420	Peptidase_S77	22.52
PF03237	Terminase_6N	0.90

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.39 %
Unclassified	root	N/A	12.61 %

Level 2

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	83.78 %
Unclassified	root	N/A	12.61 %
cellular organisms	root	All Organisms → cellular organisms	3.60 %

Level 3

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → environmental samples	76.58 %
Unclassified	root	N/A	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %

Level 4

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	76.58 %
Unclassified	root	N/A	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	2.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Level 5

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	76.58 %
Unclassified	root	N/A	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	2.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Level 6

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	76.58 %
Unclassified	root	N/A	12.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.21 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	2.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001740|JGI24656J20076_1009607	All Organisms → Viruses → Predicted Viral	1297
3300002484|JGI25129J35166_1071225	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	637
3300002484|JGI25129J35166_1094402	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	529
3300002514|JGI25133J35611_10067401	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1139
3300002514|JGI25133J35611_10149219	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	644
3300002518|JGI25134J35505_10040164	Not Available	1236
3300002518|JGI25134J35505_10054542	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	990
3300002919|JGI26061J44794_1082589	All Organisms → cellular organisms → Bacteria → Proteobacteria	559
3300003495|JGI26244J51143_1064829	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	598
3300004640|Ga0066615_1005018	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	521
3300005398|Ga0066858_10231754	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	529
3300005400|Ga0066867_10196693	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	739
3300005422|Ga0066829_10199670	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	588
3300005424|Ga0066826_10068846	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1322
3300005425|Ga0066859_10184538	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	616
3300005425|Ga0066859_10260247	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	506
3300005431|Ga0066854_10054296	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1326
3300005508|Ga0066868_10123949	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	806
3300005520|Ga0066864_10152976	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	662
3300005521|Ga0066862_10025969	Not Available	2145
3300005595|Ga0066833_10061047	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1050
3300005596|Ga0066834_10164262	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	710
3300005603|Ga0066853_10086376	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1071
3300005603|Ga0066853_10102864	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	971
3300005603|Ga0066853_10164775	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	744
3300005604|Ga0066852_10171753	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	752
3300005605|Ga0066850_10256358	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	623
3300005605|Ga0066850_10276197	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	595
3300005605|Ga0066850_10305522	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	560
3300005948|Ga0066380_10158383	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	682
3300005969|Ga0066369_10058153	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1360
3300006090|Ga0082015_1025109	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	994
3300006090|Ga0082015_1028191	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	930
3300006736|Ga0098033_1153357	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	645
3300006738|Ga0098035_1062938	Not Available	1334
3300006750|Ga0098058_1139116	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	645
3300006751|Ga0098040_1027542	All Organisms → Viruses → Predicted Viral	1823
3300006751|Ga0098040_1111925	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	819
3300006751|Ga0098040_1167685	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	647
3300006789|Ga0098054_1145712	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	876
3300006789|Ga0098054_1338851	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	535
3300006793|Ga0098055_1174613	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	822
3300006900|Ga0066376_10293095	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	951
3300006900|Ga0066376_10808268	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	506
3300006927|Ga0098034_1201442	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	555
3300006927|Ga0098034_1209457	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	543
3300008050|Ga0098052_1083070	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1325
3300008216|Ga0114898_1162352	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	639
3300009173|Ga0114996_10406176	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1043
3300009409|Ga0114993_10058073	Not Available	3081
3300009409|Ga0114993_10304854	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1211
3300009409|Ga0114993_10428237	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	991
3300009409|Ga0114993_10840107	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	661
3300009706|Ga0115002_10105661	Not Available	2295
3300010150|Ga0098056_1261345	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	573
3300010151|Ga0098061_1168861	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	786
3300010883|Ga0133547_10952608	Not Available	1667
3300017703|Ga0181367_1079956	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	564
3300017704|Ga0181371_1007111	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1956
3300017704|Ga0181371_1065224	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	590
3300020330|Ga0211572_1041724	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1202
3300020338|Ga0211571_1039675	All Organisms → Viruses → Predicted Viral	1251
3300020407|Ga0211575_10135965	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1025
3300020407|Ga0211575_10346015	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	616
3300020415|Ga0211553_10157334	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	931
3300020447|Ga0211691_10467330	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	513
3300020449|Ga0211642_10393025	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	597
3300021791|Ga0226832_10084367	Not Available	1140
3300022227|Ga0187827_10496335	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	733
3300025072|Ga0208920_1100753	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	529
3300025084|Ga0208298_1072446	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	647
3300025097|Ga0208010_1045043	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	993
3300025108|Ga0208793_1002182	Not Available	10443
3300025112|Ga0209349_1060313	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1159
3300025141|Ga0209756_1302685	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	563
3300025422|Ga0209250_1047688	Not Available	749
3300025488|Ga0209141_1054195	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	889
3300025547|Ga0209556_1019592	All Organisms → Viruses → Predicted Viral	2055
3300025547|Ga0209556_1071863	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	801
3300025592|Ga0209658_1080466	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	792
3300025665|Ga0209360_1118769	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	760
3300025727|Ga0209047_1112346	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	908
3300025776|Ga0208699_1002542	Not Available	3263
3300026182|Ga0208275_1011083	Not Available	1988
3300026186|Ga0208128_1046544	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1045
3300026209|Ga0207989_1065776	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	967
3300026209|Ga0207989_1101952	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	713
3300026212|Ga0208409_1033076	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1372
3300026253|Ga0208879_1140068	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	990
3300026256|Ga0208639_1011981	All Organisms → Viruses → Predicted Viral	3346
3300026259|Ga0208896_1047128	All Organisms → Viruses → Predicted Viral	1347
3300026259|Ga0208896_1061753	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1128
3300026261|Ga0208524_1071519	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	964
3300026261|Ga0208524_1133982	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	636
3300026267|Ga0208278_1123413	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	578
3300026268|Ga0208641_1046944	All Organisms → Viruses → Predicted Viral	1343
3300026268|Ga0208641_1084551	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	920
3300026268|Ga0208641_1127834	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	703
3300026279|Ga0208411_1053110	All Organisms → Viruses → Predicted Viral	1263
3300027685|Ga0209554_1224713	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	534
3300027685|Ga0209554_1234607	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	517
3300027838|Ga0209089_10314877	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	888
3300027844|Ga0209501_10785992	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	501
3300027847|Ga0209402_10414365	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	808
3300028190|Ga0257108_1035511	Not Available	1504
3300028190|Ga0257108_1037760	Not Available	1457
3300028190|Ga0257108_1142239	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	699
3300031861|Ga0315319_10465100	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	633
3300032138|Ga0315338_1022897	Not Available	2879
3300032278|Ga0310345_11766346	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	603
3300032278|Ga0310345_11930575	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	574

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	83.78%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.01%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.31%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.90%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	83.78%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	9.01%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.31%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.90%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	75.68%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	7.21%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.31%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.70%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.70%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.80%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.90%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001740	Marine viral communities from the Deep Pacific Ocean - MSP-114	Environmental
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental
3300002919	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV	Environmental
3300003495	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA	Environmental
3300004640	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI047_135m_RNA (Metagenome Metatranscriptome)	Environmental
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental
3300005520	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251	Environmental
3300005521	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255	Environmental
3300005595	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B	Environmental
3300005596	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B	Environmental
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental
3300010883	western Arctic Ocean co-assembly	Environmental
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental
3300020330	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556097-ERR599147)	Environmental
3300020338	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX555920-ERR599099)	Environmental
3300020407	Marine microbial communities from Tara Oceans - TARA_B100001105 (ERX556033-ERR599115)	Environmental
3300020415	Marine microbial communities from Tara Oceans - TARA_B100001146 (ERX555973-ERR599166)	Environmental
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental
3300025422	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_200m_DNA (SPAdes)	Environmental
3300025488	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_10m_DNA (SPAdes)	Environmental
3300025547	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_150m_DNA (SPAdes)	Environmental
3300025592	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA (SPAdes)	Environmental
3300025665	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA (SPAdes)	Environmental
3300025727	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNA (SPAdes)	Environmental
3300025776	Marine microbial communities from the Deep Pacific Ocean - MP2097 (SPAdes)	Environmental
3300026182	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49B (SPAdes)	Environmental
3300026186	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF51B (SPAdes)	Environmental
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental
3300026212	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201 (SPAdes)	Environmental
3300026253	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)	Environmental
3300026256	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes)	Environmental
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental
3300026267	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)	Environmental
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental
3300026279	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)	Environmental
3300027685	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)	Environmental
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental
3300032138	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8	Environmental
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24656J20076_10096071	3300001740	Deep Ocean	MNKKQEFNMNKKWREFRLDEKLNEENESTWTWIYKGILGGYKKADKKGNANLDSVARATAFLI
JGI25129J35166_10712252	3300002484	Marine	MKKKEVFNMNKKWAAYRLDEKLNEENESLWTWVYKGFLDGFRKAEKK
JGI25129J35166_10944022	3300002484	Marine	MKKKEVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGK
JGI25133J35611_100674011	3300002514	Marine	MKKKQVFNMNKKWTAYRLDEKLSEENESLWTWVYKGVLGGFKKAEKKGGGSVSLDE
JGI25133J35611_101492191	3300002514	Marine	MKKKEVFNMNKKWTAYRLDEKLNEENESLWTWVYKGFLDGFRKAEKK
JGI25134J35505_100401643	3300002518	Marine	MKKKQVFNMNKKWTAYRLDEKLSEENESLWTWVYKGVLGGFKKAEKKGGGSVSLDEV
JGI25134J35505_100545422	3300002518	Marine	VKKKQVFDMTRKWKTFRLDEKLNEENESLWTWVYKGFLGGFKK
JGI26061J44794_10825892	3300002919	Marine	MKKKQVFDMNKKWREFRLDETLNEENESTWTWIYKGILGGFKKADKK
JGI26244J51143_10648291	3300003495	Marine	MKNKQVFKMNKKWREFRLDETLNEENESTWTWIYKGLLGGFKKAEKKGDA
Ga0066615_10050182	3300004640	Marine	MKENQVFKMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKG
Ga0066858_102317541	3300005398	Marine	MKKKEVFNMNKKWTAYRLDEKLNEENESLWTWVYKGFLDG
Ga0066867_101966932	3300005400	Marine	VKKKQVFDMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGI
Ga0066829_101996702	3300005422	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIA
Ga0066826_100688461	3300005424	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDEVARGV
Ga0066859_101845382	3300005425	Marine	MKKKEVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALS
Ga0066859_102602472	3300005425	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLDGFRKAEK
Ga0066854_100542961	3300005431	Marine	MKKKEVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDEIARGVAF
Ga0066868_101239491	3300005508	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLD
Ga0066864_101529762	3300005520	Marine	MKKKEVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRK
Ga0066862_100259691	3300005521	Marine	VKKKQVFDMTRKWKTFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLDEVARGVAFL
Ga0066833_100610471	3300005595	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALS
Ga0066834_101642621	3300005596	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIAL
Ga0066853_100863761	3300005603	Marine	VKKKQVFDMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKG
Ga0066853_101028642	3300005603	Marine	MKKKEVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFL
Ga0066853_101647752	3300005603	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGK
Ga0066852_101717531	3300005604	Marine	VKKKQVFDMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDEIARGVAF
Ga0066850_102563582	3300005605	Marine	MKINKKQVFNMNRKWKTFRLDEKLNEENESLWTWVYKGILGGFKKAEKKGGGSVSLDEVARGVA
Ga0066850_102761972	3300005605	Marine	MNKKHEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGG
Ga0066850_103055222	3300005605	Marine	VKKKQVFDMTRKWKTFRLDEKLNEENESLWTWVYKGFLGGFKKAEKK
Ga0066380_101583832	3300005948	Marine	MKNKQVFNMNRKWKTFRLDEKLNEENESTWTWIYKGLLGGFKKADRKGDASLDAVARGVAFLIKTEF
Ga0066369_100581533	3300005969	Marine	MKKKQVFDMNKKWREFRLDETLNEENESTWTWIYKGILGGFKKADKKGDASLDSVARATA
Ga0082015_10251092	3300006090	Marine	MKKKEVFNMNKKWTAYRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIAL
Ga0082015_10281911	3300006090	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDE
Ga0098033_11533572	3300006736	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDE
Ga0098035_10629383	3300006738	Marine	MNKKHEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGG
Ga0098058_11391161	3300006750	Marine	MMNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLDGF
Ga0098040_10275425	3300006751	Marine	MNKKHEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLDE
Ga0098040_11119251	3300006751	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGF
Ga0098040_11676852	3300006751	Marine	MKINKKQVFNMNRKWKTFRLDEKLNEENESLWTWVYKGILGGFKKAEK
Ga0098054_11457121	3300006789	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGF
Ga0098054_13388512	3300006789	Marine	MKYKTVRNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKK
Ga0098055_11746132	3300006793	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAE
Ga0066376_102930952	3300006900	Marine	MMNKKQEFYMNKKWIAYRLDEKLNEENESTWTWIYKGILGGFKKADKKGDASLDSVARATAFLIK
Ga0066376_108082682	3300006900	Marine	MNKKWIAYRLDETLNEENESTWTWIYKGILGGFKKADKKGDASLDSVARATAFLIK
Ga0098034_12014421	3300006927	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGI
Ga0098034_12094571	3300006927	Marine	MMNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLD
Ga0098052_10830701	3300008050	Marine	MMNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLDEIARGVAFLVKT
Ga0114898_11623522	3300008216	Deep Ocean	MNKKQVFKMNKKWVTYRLDEKLNEENESTWTWIYKGILGGFKKADRKGDASLDAVARGVAFLVK
Ga0114996_104061762	3300009173	Marine	MKQSNKQVFKMNKKWREYRLDETLNEENESLWTWVYKGVLGGFKKAEKKGGGSVSLDEVARGVAFLIKTE
Ga0114993_100580737	3300009409	Marine	MKNKQVFKMNKKWREFRLDETLNEENESTWTWIYKGLLGGFKKAEKKGDASLDEVARGVAFLIK
Ga0114993_103048543	3300009409	Marine	MKEKQVFKMNKKWREYRLDETLNEGNESLWTWVYKGVLGGFKKAEKQGG
Ga0114993_104282372	3300009409	Marine	MKQSNKQVFKMNKKWREYRLDETLNEENESTWTWIYKGLLGGFKKAEKKGDASLDEVARGVAFLIK
Ga0114993_108401072	3300009409	Marine	MKEKQVFKMNKKWREYRLDETLNEGNESLWTWVYKGVLGGFKKAEKQGGGSVSLDEVARGVAFL
Ga0115002_101056614	3300009706	Marine	MKEKQVFKMNKKWREYRLDETLNEGNESLWTWVYKGVLGGFKKAEKQGGGSVSLDEVARGVAFLV
Ga0098056_12613452	3300010150	Marine	MMNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLDEIAR
Ga0098061_11688612	3300010151	Marine	MMNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLDE
Ga0133547_109526081	3300010883	Marine	MKEKQVFKMNKKWREYRLDETLNEGNESLWTWVYKGVL
Ga0181367_10799562	3300017703	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLD
Ga0181371_10071111	3300017704	Marine	MKKKEVFNMNKKWTAYRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDEIARGVAFLV
Ga0181371_10652241	3300017704	Marine	MMNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGG
Ga0211572_10417241	3300020330	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLDGFRKAEKK
Ga0211571_10396751	3300020338	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLDGFR
Ga0211575_101359652	3300020407	Marine	MKHIEIRDMNKKWREYRLDEKVNEENESTWTWIYKGILGGFKKADKKGDASLDAVARGVAFLIKT
Ga0211575_103460151	3300020407	Marine	MKKKEVFNMNKKWIAYRLDEKLNEENESTWTWIYKGILGGYKKADKKGNANLDSVARATAFLIKTEF
Ga0211553_101573341	3300020415	Marine	MKHIEIRDMNKKWREYRLDETVSEENESLWTWVYKGVLGGFKKAEKKGGGSVSLDEVARGVAFLV
Ga0211691_104673301	3300020447	Marine	MNKKQVFKMNKKWVTYRLDEKVNEENESLWTWVYK
Ga0211642_103930251	3300020449	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRK
Ga0226832_100843671	3300021791	Hydrothermal Vent Fluids	MNKKQAFHMNRKWKTFRLDEKLNEENESTWTWIYKGILGGFKKA
Ga0187827_104963352	3300022227	Seawater	VKKKQVFDMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKK
Ga0208920_11007531	3300025072	Marine	MKKKEVFNMNKKWTAYRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSL
Ga0208298_10724461	3300025084	Marine	MMNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLDEIARGVAF
Ga0208010_10450433	3300025097	Marine	MNKKHEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKK
Ga0208793_10021821	3300025108	Marine	MNKKHEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLDEVARGVAFLVKTE
Ga0209349_10603133	3300025112	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSL
Ga0209756_13026851	3300025141	Marine	MKKKEVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDG
Ga0209250_10476881	3300025422	Marine	MKDRQIYEMNKKWREFRLDEKLNEENESLWTWVYKGVLGGFKKAEKKGGGSVSLD
Ga0209141_10541951	3300025488	Marine	MKENQVFKMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKK
Ga0209556_10195925	3300025547	Marine	MKENQVFKMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAE
Ga0209556_10718632	3300025547	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKG
Ga0209658_10804662	3300025592	Marine	MKENQVFKMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVS
Ga0209360_11187691	3300025665	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGG
Ga0209047_11123461	3300025727	Marine	MKNKQVFKMNKKWREFRLDETLNEENESTWTWIYKGLLGGFKKAEKKGDASLDEVARGVAFL
Ga0208699_10025421	3300025776	Deep Ocean	MKKKEVFNMNKKWTAYRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDEV
Ga0208275_10110834	3300026182	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDEVARGVAFL
Ga0208128_10465443	3300026186	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKD
Ga0207989_10657763	3300026209	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLDEIA
Ga0207989_11019521	3300026209	Marine	VKKKQVFDMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKK
Ga0208409_10330761	3300026212	Marine	MKKKEVFNMNKKWTAYRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDEVARGVAFLVKT
Ga0208879_11400682	3300026253	Marine	MMNKKQEFYMNKKWIAYRLDEKLNEENESTWTWIYKGILGGFKKADKKGDASLDSVA
Ga0208639_10119811	3300026256	Marine	MKKKQVFNMNRKWRTFRLDEKLNEENESLWTWVYKGF
Ga0208896_10471283	3300026259	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFK
Ga0208896_10617533	3300026259	Marine	VKKKQVFDMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSL
Ga0208524_10715193	3300026261	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGGFKKAEKKGGGSVSLDEVARG
Ga0208524_11339822	3300026261	Marine	MKKKEVFNMNKKWTAYRLDEKLNEENESLWTWVYKGF
Ga0208278_11234132	3300026267	Marine	MKINKKQVFNMNRKWKTFRLDEKLNEENESLWTWVYKGILGGFKKAEKKGGGSV
Ga0208641_10469441	3300026268	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLDGFRK
Ga0208641_10845511	3300026268	Marine	MKINKKQVFNMNRKWKTFRLDEKLNEENESLWTWVYKGI
Ga0208641_11278342	3300026268	Marine	VKKKQVFDMNRKWRTFRLDEKLNEENESLWTWVYKGFLDGFRKAEKKGKKDGIALSLDE
Ga0208411_10531103	3300026279	Marine	MNKKQEFNMNKKWREFRLDEKLNEENESLWTWVYKGFLGG
Ga0209554_12247132	3300027685	Marine	MKKKQVFEMNKKWTTFRLDEKLNEENESTWTWIYKGLLSGFKTADKKGDA
Ga0209554_12346071	3300027685	Marine	VKNKEIFNMNKKWIAYRLDETLNEENESTWTWIYKGILGGFKKADKKGDASLDSVA
Ga0209089_103148772	3300027838	Marine	MKQSNKQVFKMNKKWREYRLDETLNEENESTWTWIYKGLLGGFKKAEKKGDASLDEVARGVA
Ga0209501_107859921	3300027844	Marine	MKNKQVFKMNKKWREFRLDETLNEGNESLWTWVYKGVLGGFKKI
Ga0209402_104143652	3300027847	Marine	MKEKQVFKMNKKWREYRLDETLNEGNESLWTWVYKGVLG
Ga0257108_10355113	3300028190	Marine	MKQSNKQVFKMNKKWREYRLDETLNEENESLWTWVYKGILG
Ga0257108_10377601	3300028190	Marine	MNRKQEFHMNKKWREYRLDETLNEENESLWTWVYKGILGGFKKAEKKGGGS
Ga0257108_11422391	3300028190	Marine	MKHIEIRDMNKKWREYRLDEKVNEENESTWTWIYKGILGGFKKADKK
Ga0315319_104651002	3300031861	Seawater	MKQSNKQVFKMNKKWREYRLDEKLNEENESSWTFVYKGLLSGFKKAGLKAKRTDGSLDSVARAA
Ga0315338_10228976	3300032138	Seawater	MNKKQAFHMNRKWKTFRLDEKLNEENESTWTWIYKGILGGFKKADKKGDASLDAVARGVAFL
Ga0310345_117663462	3300032278	Seawater	MKKKQVFKMNKKWTAYRLDEKLNEENESLWTWVYKGVLGGFKKAEKKGGGSVSL
Ga0310345_119305751	3300032278	Seawater	VKNKEVFNMNKKWTSYRLDETLNEENESSWTFVYKGLLSGFKKAGLKAKRTDGSLDSVARAAA