Metagenome Family F085555

Basic Information
Family ID	F085555
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	83 residues
Representative Sequence	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEK
Number of Associated Samples	64
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	53.85 %
% of genes near scaffold ends (potentially truncated)	6.31 %
% of genes from short scaffolds (< 2000 bps)	9.01 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (95.495 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (78.378 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.01% β-sheet: 0.00% Coil/Unstructured: 18.99%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF06067	DUF932	7.21
PF01402	RHH_1	5.41
PF13443	HTH_26	4.50
PF08401	ArdcN	1.80
PF01612	DNA_pol_A_exo1	0.90
PF14025	DUF4241	0.90
PF04545	Sigma70_r4	0.90
PF09588	YqaJ	0.90
PF02195	ParBc	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	1.80

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.50 %
All Organisms	root	All Organisms	4.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.50 %
Viruses	superkingdom	All Organisms → Viruses	2.70 %
cellular organisms	root	All Organisms → cellular organisms	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002484\|JGI25129J35166_1020313	All Organisms → Viruses → Predicted Viral	1530	Open in IMG/M
3300002518\|JGI25134J35505_10007596	All Organisms → cellular organisms → Bacteria	3781	Open in IMG/M
3300005425\|Ga0066859_10021571	All Organisms → Viruses → Predicted Viral	1977	Open in IMG/M
3300005425\|Ga0066859_10034030	Not Available	1565	Open in IMG/M
3300005596\|Ga0066834_10231115	Not Available	584	Open in IMG/M
3300010155\|Ga0098047_10179839	Not Available	814	Open in IMG/M
3300017718\|Ga0181375_1075601	Not Available	548	Open in IMG/M
3300020262\|Ga0211537_1004811	All Organisms → Viruses	3824	Open in IMG/M
3300022227\|Ga0187827_10774287	Not Available	534	Open in IMG/M
3300025112\|Ga0209349_1003906	Not Available	6709	Open in IMG/M
3300025131\|Ga0209128_1157881	Not Available	673	Open in IMG/M
3300025265\|Ga0208467_1019668	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300026208\|Ga0208640_1069805	Not Available	792	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	91.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.31%
Strait	Environmental → Aquatic → Marine → Strait	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	90.99%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.80%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	78.38%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	9.91%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.31%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.70%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.80%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental	Open in IMG/M
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental	Open in IMG/M
3300005551	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A	Environmental	Open in IMG/M
3300005592	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005595	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B	Environmental	Open in IMG/M
3300005596	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020262	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)	Environmental	Open in IMG/M
3300020295	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX555980-ERR599109)	Environmental	Open in IMG/M
3300020330	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556097-ERR599147)	Environmental	Open in IMG/M
3300020338	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX555920-ERR599099)	Environmental	Open in IMG/M
3300020344	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556104-ERR598987)	Environmental	Open in IMG/M
3300020361	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025265	Marine microbial communities from the Deep Pacific Ocean - MP2098 (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026202	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B (SPAdes)	Environmental	Open in IMG/M
3300026208	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72 (SPAdes)	Environmental	Open in IMG/M
3300026210	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251 (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300026254	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86 (SPAdes)	Environmental	Open in IMG/M
3300026256	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes)	Environmental	Open in IMG/M
3300026267	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)	Environmental	Open in IMG/M
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25129J35166_10203134	3300002484	Marine	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNKIQYLADDIDKQREARDREIEQFRAKEFKE*
JGI25133J35611_100886263	3300002514	Marine	EKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKWILKK*
JGI25134J35505_100075962	3300002518	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFRAKEFKE*
JGI25134J35505_101004721	3300002518	Marine	NMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKWILKK*
JGI25134J35505_101016182	3300002518	Marine	NMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREARDREIEQFRAKEFKE*
JGI25130J35507_10293573	3300002519	Marine	MERYTDKDVIKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARFIVKLLNYDKEVNTRIQYLADDIDKQKN*
JGI25130J35507_10528923	3300002519	Marine	VIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREARDREIEQFRAKEFKE*
JGI25130J35507_10720943	3300002519	Marine	KRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEK*
Ga0066858_100706691	3300005398	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQY
Ga0066858_101534011	3300005398	Marine	ETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREDMARYIVKLLNYDKNVNNRIQYLADDIDKQREETINKKKEEK*
Ga0066867_102049952	3300005400	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDENVNNRIQYLADDIDKQNDLL*
Ga0066848_100845373	3300005408	Marine	TDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEK*
Ga0066848_100889332	3300005408	Marine	ETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNYDKEVNTRIQYLADDIDKQWKEMINKKKEEK*
Ga0066848_101101251	3300005408	Marine	YTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRTEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEK*
Ga0066829_100140871	3300005422	Marine	ETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFRAKEFKE*
Ga0066829_101374163	3300005422	Marine	MERYTDKDVIKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARFIVKLLNCDENVNNRIQYLADDIDKQRKT*
Ga0066829_101685173	3300005422	Marine	TETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQWKEMINKKKEEK*
Ga0066826_101786962	3300005424	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKWILKK*
Ga0066859_100215715	3300005425	Marine	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFRAKEFKE*
Ga0066859_100340306	3300005425	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEK*
Ga0066847_100523971	3300005426	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNYDKEVNTRIQYLADDIDKQREEENES*
Ga0066854_100558941	3300005431	Marine	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQ
Ga0066843_101344821	3300005551	Marine	VKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEENESKNKRRTT*
Ga0066843_102215672	3300005551	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNYDKEVNTRIQYLADDIDKQNDLLEALKALM
Ga0066838_101069474	3300005592	Marine	TDKDVIKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARFIVKLLNCDENVNNRIQYLADDIDKQRKT*
Ga0066838_101656852	3300005592	Marine	MERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREARDREIEQFRAKEFKE*
Ga0066838_102096883	3300005592	Marine	RFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQRKEENESKNKRRTT*
Ga0066837_100692593	3300005593	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREEEK*
Ga0066833_101058113	3300005595	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQRKEENESKNKRRTT*
Ga0066834_102311153	3300005596	Marine	MTTKKPVGVSMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLN
Ga0066850_101082995	3300005605	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFRAKEFKE*
Ga0082015_10046992	3300006090	Marine	MERYTDKDVTKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARFIVKLLNCDENVNNRIQYLADDIDKQRKT*
Ga0082015_10367633	3300006090	Marine	FEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFRAKEFKE*
Ga0082015_10581253	3300006090	Marine	MTTKKPVGVSMERYIETDVIKRFEKVVKDRMTVRVFNAMSRTYRDVFLLSEVRAEMTRYIVKLLNCDENVNNRIQYLADDIDKQNDLLEALKALM
Ga0082015_10682282	3300006090	Marine	MERYTETDVIKRFEKAVKDRMTIRVFNAMPRTYRTVFLLSEVRKEMTRYIVKLLNCDENVNNRIQYLADDIDKQKS*
Ga0098033_12161011	3300006736	Marine	MERYTDKDVTKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARFIVKLLNCDENVNNR
Ga0098035_12951061	3300006738	Marine	YTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREDMARYIVKLLNYDKEVNTRIQYLADDIDKQREETINKKKEEKVR
Ga0098058_10968604	3300006750	Marine	MERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREDMARYIVKLLNYDKNVNNRIQYLADDIDKQREETINKKKEEK*
Ga0098040_10503604	3300006751	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREARDREIEQFRAKEFKE*
Ga0098039_10647054	3300006753	Marine	MKIKRIGGNMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVN
Ga0098039_10812192	3300006753	Marine	MERYTETDVIKRFEKAVKDRMTIRVFNAMPRTYRTVFLLSEVRKEMTRYIVKLLNCDENVNNRIQYLADDIDKQKN*
Ga0098039_11551461	3300006753	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNARPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNR
Ga0098039_11816363	3300006753	Marine	MEIYTETDIIKRFEKVVKDRMTVRVFNAMPRTYKDVFLLSEVREEMTRYIVKLLNCDKNVNNKIQYLADDIDKQREEEKKRKSGNTH
Ga0098044_12704272	3300006754	Marine	MERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREDMARYIVKLLNYDKNVNNRIQYLADDIDKQREETINKKKEEKVR
Ga0098045_10202954	3300006922	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKWILKK*
Ga0098034_10896941	3300006927	Marine	TDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKILKK
Ga0098059_11381283	3300010153	Marine	MERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNYDKEVNTRIQYLADDIDKQNDLL*
Ga0098047_1001273410	3300010155	Marine	LGQNKGGSMERYTDKDVTKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARFIVKLLNCDENVNNRIQYLADDIDKQRKT*
Ga0098047_101798392	3300010155	Marine	MKIKRIGGNMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFRAKEFKE*
Ga0098047_103614872	3300010155	Marine	MTTKKPVGVSMERYIETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDENVNNRIQYLADDIDKQNDLL*
Ga0163108_104972493	3300012950	Seawater	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIAKLLNCDKEVNTR
Ga0181374_10210601	3300017702	Marine	GGNMERYTETDVIKRFEKAVKDRMTIRVFNAMPRTYRTVFLLSEVREDMARFIVKLLNYDKEVNTRIQYLADDIDKQKN
Ga0181374_10676381	3300017702	Marine	RFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREDMARYIVKLLNYDKNVNNRIQYLADDIDKQREETINKKKEEKXVR
Ga0181374_10703001	3300017702	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEENESXKNKRRTXT
Ga0181367_10633872	3300017703	Marine	MTTKKPVGVSMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDENVNNRIQYLADDIDKQNDLLXEAXLKAXLM
Ga0181375_10756012	3300017718	Marine	TETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFRAKEFKE
Ga0181432_10845132	3300017775	Seawater	MERYTDKDVIKRFEKAVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQKN
Ga0181432_12129532	3300017775	Seawater	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIV
Ga0211537_10048111	3300020262	Marine	MERYTDKDVIKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARYIVKLLNCDENVNNRIQYLADDIDKQR
Ga0211530_10213222	3300020295	Marine	MERYTDKDVIKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARYIVKLLNCDENVNNRIQYLADDIDKQRKT
Ga0211572_10840344	3300020330	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLN
Ga0211571_11193723	3300020338	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKXILKK
Ga0211570_10833681	3300020344	Marine	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDENVNNRIQYLADDIDKQNDLLXEAXLKAXLM
Ga0211531_10936301	3300020361	Marine	MERYTDKDVIKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARFIVKLLNCDENVNNRIQYLADDIDKQR
Ga0211538_11221522	3300020364	Marine	MERYTETDVIKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARYIVKLLNCDENVNNRIQYLADDIDKQREETINKKKEEK
Ga0187833_100181532	3300022225	Seawater	MERYTETDVIKRFEKAVKDRMTIRVFNAMPRTYRTVFLLSEVRKEMTRYIVKLLNCDENVNNRIQYLADDIDKQKN
Ga0187833_100777533	3300022225	Seawater	MERYTDKDVTKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARFIVKLLNCDENVNNRIQYLADDIDKQRKT
Ga0187833_101206451	3300022225	Seawater	MKIKRIGGNMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREARDREIEQFRAKEFKE
Ga0187833_102859581	3300022225	Seawater	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEK
Ga0187833_104067353	3300022225	Seawater	MTTKKPVGVSMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNKIQYLADDIDKQNDLL
Ga0187833_104251551	3300022225	Seawater	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQWKEMINKKKEEKXVH
Ga0187827_101674155	3300022227	Seawater	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNYDKEVNTRIQYLADDIDKQREEENESXKNKRRTXT
Ga0187827_104109784	3300022227	Seawater	MTTKKPVGVSMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDENVNNRIQYLADDIDKQNDLLXEA
Ga0187827_104776992	3300022227	Seawater	MERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREARDREIEQFRAKEFKEYLGMSHLKHKV
Ga0187827_106583822	3300022227	Seawater	MTTKKPVGVSMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDENVNNRIQYLADDIDKQNDLL
Ga0187827_107742872	3300022227	Seawater	MEIYTETDVIKRFEKVVKDRMTVRVFNAMPRTYKDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQRKEENESXKNKRRTXT
Ga0208920_10665471	3300025072	Marine	GNMEIYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKXILKK
Ga0208668_10167131	3300025078	Marine	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIV
Ga0208668_10222645	3300025078	Marine	MGRYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREDMARYIVKLLNYDKNVNNRIQYLADDIDKQREETINKKKEEK
Ga0208668_10382682	3300025078	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREARDREIEQFRAKEFKEYLGMSHLKHKV
Ga0208668_10541963	3300025078	Marine	MTTKKPVGVSMERYIETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDENVNNRIQYLADDIDKQNDLL
Ga0208156_10032802	3300025082	Marine	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREARDREIEQFRAKEFKEYLGMSHLKHKV
Ga0208156_10104452	3300025082	Marine	MERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREDMARYIVKLLNYDKNVNNRIQYLADDIDKQREETINKKKEEK
Ga0208156_10136843	3300025082	Marine	MEIYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEK
Ga0208156_10731492	3300025082	Marine	MKIKRIGGNMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFRAKEFKE
Ga0208010_10532602	3300025097	Marine	MERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREDMARYIVKLLNYDKNVNNRIQYLADDIDKQREETINKKKEEKXVR
Ga0208553_10390872	3300025109	Marine	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQREARDREIEQFRAKEFKE
Ga0209349_10039061	3300025112	Marine	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNKIQYLADDIDKQR
Ga0209349_10109837	3300025112	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKWILKK
Ga0208433_10902082	3300025114	Marine	MTTKKPVGVSMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREDMARYIVKLLNYDKNVNNRIQYLADDIDKQREETINKKKEEKXVR
Ga0209434_10456202	3300025122	Marine	MERYTDKDVIKRFEKAVKDRMTARVFNAMPRTYRDVFLLSEVREDMARFIVKLLNCDENVNNRIQYLADDIDKQRKT
Ga0209434_10622374	3300025122	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFR
Ga0209434_10659332	3300025122	Marine	MTTKKPVGVSMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNKIQYLADDIDKQREEEKXEK
Ga0209434_11292691	3300025122	Marine	YTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEENESXKNKRRTXT
Ga0209434_11958801	3300025122	Marine	MERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFR
Ga0209128_10590873	3300025131	Marine	VIKRFEKVVKDRMTVRVFNAMPRTYKDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQRKEENES
Ga0209128_11578813	3300025131	Marine	TDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREARDREIEQFRAKEFKE
Ga0209756_10188341	3300025141	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNK
Ga0209756_10473781	3300025141	Marine	TDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKWILKK
Ga0208467_10196684	3300025265	Deep Ocean	MKIKRIGGNMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQWKEM
Ga0207894_10654902	3300025268	Deep Ocean	MEIYAEKDVIKQFEKIVKDRMTMKVFNAMPRTYRNVLLLSEIRKDMARFIVKLLNYENVNTRIQCLADDIDKQRKT
Ga0207894_10683051	3300025268	Deep Ocean	MTTKKPVGVSMERYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNKIQYLADDIDKQNDLLXEAXLKAXLM
Ga0209757_101745811	3300025873	Marine	MEIYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKXILKK
Ga0207984_10569154	3300026202	Marine	YTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQNDLL
Ga0208640_10698053	3300026208	Marine	MKIKRIGGNMEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDINVNNK
Ga0208642_100238723	3300026210	Marine	YTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKWILKK
Ga0208132_11287152	3300026211	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQWKEMINKKKEEKXILKK
Ga0208522_10143282	3300026254	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEK
Ga0208639_11395572	3300026256	Marine	MEIYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKWILKK
Ga0208278_10368391	3300026267	Marine	YTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVREEMTRYIVKLLNCDKNVNNRIQYLADDIDKQREEEKXILKK
Ga0208641_10665225	3300026268	Marine	MEKYTETDVIKRFEKVVKDRMTVRVFNAMPRTYRDVFLLSEVRAEMTRYIVKLLNCDKNVNNRIQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085555

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign