Metagenome / Metatranscriptome Family F085526

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085526
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	67 residues
Representative Sequence	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHIAHIPEKTLPNTLWT
Number of Associated Samples	77
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	74.77 %
% of genes near scaffold ends (potentially truncated)	29.73 %
% of genes from short scaffolds (< 2000 bps)	56.76 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (98.198 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil (30.631 % of family members)
Environment Ontology (ENVO)	Unclassified (51.351 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.360 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.52% β-sheet: 4.35% Coil/Unstructured: 39.13%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00291	PALP	18.92
PF02771	Acyl-CoA_dh_N	9.91
PF00441	Acyl-CoA_dh_1	9.01
PF00011	HSP20	2.70
PF01842	ACT	2.70
PF02770	Acyl-CoA_dh_M	2.70
PF08541	ACP_syn_III_C	1.80
PF08540	HMG_CoA_synt_C	1.80
PF02778	tRNA_int_endo_N	1.80
PF00464	SHMT	0.90
PF00152	tRNA-synt_2	0.90
PF01061	ABC2_membrane	0.90
PF13561	adh_short_C2	0.90
PF05221	AdoHcyase	0.90
PF04472	SepF	0.90
PF00670	AdoHcyase_NAD	0.90
PF00528	BPD_transp_1	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	21.62
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	2.70
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	1.80
COG1676	tRNA splicing endonuclease subunit SEN34	Translation, ribosomal structure and biogenesis [J]	1.80
COG3425	3-hydroxy-3-methylglutaryl CoA synthase	Lipid transport and metabolism [I]	1.80
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.90
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.90
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.90
COG1799	Cell division protein SepF/YlmF, interacts with FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	0.90
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	98.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	6.31 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3.60 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	2.70 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3.60 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	2.70 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3.60 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2.70 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
Unclassified	root	N/A	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1000717	All Organisms → cellular organisms → Archaea	4842	Open in IMG/M
3300002558\|JGI25385J37094_10001802	All Organisms → cellular organisms → Archaea	6967	Open in IMG/M
3300002558\|JGI25385J37094_10032895	All Organisms → cellular organisms → Archaea	1823	Open in IMG/M
3300002558\|JGI25385J37094_10193693	All Organisms → cellular organisms → Archaea	544	Open in IMG/M
3300002560\|JGI25383J37093_10000785	All Organisms → cellular organisms → Archaea	8093	Open in IMG/M
3300002560\|JGI25383J37093_10006233	All Organisms → cellular organisms → Archaea	3815	Open in IMG/M
3300002560\|JGI25383J37093_10031346	All Organisms → cellular organisms → Archaea	1777	Open in IMG/M
3300002560\|JGI25383J37093_10090066	All Organisms → cellular organisms → Archaea	913	Open in IMG/M
3300002561\|JGI25384J37096_10009231	All Organisms → cellular organisms → Archaea → Euryarchaeota	3719	Open in IMG/M
3300002561\|JGI25384J37096_10040496	All Organisms → cellular organisms → Archaea	1805	Open in IMG/M
3300002561\|JGI25384J37096_10080482	All Organisms → cellular organisms → Archaea	1178	Open in IMG/M
3300002562\|JGI25382J37095_10123925	All Organisms → cellular organisms → Archaea	878	Open in IMG/M
3300002562\|JGI25382J37095_10179481	All Organisms → cellular organisms → Archaea	654	Open in IMG/M
3300002562\|JGI25382J37095_10208981	All Organisms → cellular organisms → Archaea	589	Open in IMG/M
3300002908\|JGI25382J43887_10017100	All Organisms → cellular organisms → Archaea → Euryarchaeota	3809	Open in IMG/M
3300002908\|JGI25382J43887_10126074	All Organisms → cellular organisms → Archaea	1327	Open in IMG/M
3300002912\|JGI25386J43895_10179683	All Organisms → cellular organisms → Archaea	531	Open in IMG/M
3300002914\|JGI25617J43924_10037776	All Organisms → cellular organisms → Archaea	1738	Open in IMG/M
3300005167\|Ga0066672_10834859	All Organisms → cellular organisms → Archaea	576	Open in IMG/M
3300005171\|Ga0066677_10340732	All Organisms → cellular organisms → Archaea	858	Open in IMG/M
3300005178\|Ga0066688_10813410	All Organisms → cellular organisms → Archaea	583	Open in IMG/M
3300005179\|Ga0066684_10066233	All Organisms → cellular organisms → Archaea	2123	Open in IMG/M
3300005186\|Ga0066676_10242740	Not Available	1174	Open in IMG/M
3300005445\|Ga0070708_100004349	All Organisms → cellular organisms → Archaea	11126	Open in IMG/M
3300005445\|Ga0070708_101008990	All Organisms → cellular organisms → Archaea	780	Open in IMG/M
3300005468\|Ga0070707_100000074	All Organisms → cellular organisms → Archaea	88035	Open in IMG/M
3300005468\|Ga0070707_100112030	All Organisms → cellular organisms → Archaea	2647	Open in IMG/M
3300005518\|Ga0070699_101107879	All Organisms → cellular organisms → Archaea	726	Open in IMG/M
3300005542\|Ga0070732_10005477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6885	Open in IMG/M
3300005555\|Ga0066692_10048749	All Organisms → cellular organisms → Archaea	2344	Open in IMG/M
3300005558\|Ga0066698_10043013	All Organisms → cellular organisms → Archaea	2817	Open in IMG/M
3300005575\|Ga0066702_10466228	All Organisms → cellular organisms → Archaea	772	Open in IMG/M
3300005586\|Ga0066691_10105231	All Organisms → cellular organisms → Archaea	1589	Open in IMG/M
3300006755\|Ga0079222_10368156	All Organisms → cellular organisms → Archaea	981	Open in IMG/M
3300006800\|Ga0066660_10939261	All Organisms → cellular organisms → Archaea	701	Open in IMG/M
3300009038\|Ga0099829_10001981	All Organisms → cellular organisms → Archaea	11603	Open in IMG/M
3300009038\|Ga0099829_10458698	All Organisms → cellular organisms → Archaea	1056	Open in IMG/M
3300009038\|Ga0099829_10480330	All Organisms → cellular organisms → Archaea	1031	Open in IMG/M
3300009088\|Ga0099830_10023407	All Organisms → cellular organisms → Archaea	4062	Open in IMG/M
3300009089\|Ga0099828_10000444	All Organisms → cellular organisms → Archaea	25225	Open in IMG/M
3300009137\|Ga0066709_100932700	All Organisms → cellular organisms → Archaea	1267	Open in IMG/M
3300010134\|Ga0127484_1039593	All Organisms → cellular organisms → Archaea	537	Open in IMG/M
3300010303\|Ga0134082_10002610	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	6399	Open in IMG/M
3300010304\|Ga0134088_10421187	All Organisms → cellular organisms → Archaea	652	Open in IMG/M
3300010336\|Ga0134071_10238775	All Organisms → cellular organisms → Archaea	903	Open in IMG/M
3300010361\|Ga0126378_11440294	All Organisms → cellular organisms → Archaea	780	Open in IMG/M
3300012189\|Ga0137388_10590265	All Organisms → cellular organisms → Archaea	1033	Open in IMG/M
3300012198\|Ga0137364_10073542	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2344	Open in IMG/M
3300012199\|Ga0137383_10032590	All Organisms → cellular organisms → Archaea	3665	Open in IMG/M
3300012201\|Ga0137365_10028561	All Organisms → cellular organisms → Archaea	4297	Open in IMG/M
3300012201\|Ga0137365_10278245	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1242	Open in IMG/M
3300012201\|Ga0137365_11284106	All Organisms → cellular organisms → Archaea	520	Open in IMG/M
3300012204\|Ga0137374_10056324	All Organisms → cellular organisms → Archaea	3992	Open in IMG/M
3300012204\|Ga0137374_10210613	All Organisms → cellular organisms → Archaea	1665	Open in IMG/M
3300012206\|Ga0137380_10015051	All Organisms → cellular organisms → Archaea	7060	Open in IMG/M
3300012206\|Ga0137380_10027254	All Organisms → cellular organisms → Archaea	5266	Open in IMG/M
3300012206\|Ga0137380_10398548	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1222	Open in IMG/M
3300012206\|Ga0137380_10480367	All Organisms → cellular organisms → Archaea	1096	Open in IMG/M
3300012210\|Ga0137378_10006472	All Organisms → cellular organisms → Archaea	10170	Open in IMG/M
3300012211\|Ga0137377_10744578	All Organisms → cellular organisms → Archaea	914	Open in IMG/M
3300012349\|Ga0137387_10301674	All Organisms → cellular organisms → Archaea	1158	Open in IMG/M
3300012353\|Ga0137367_10349149	All Organisms → cellular organisms → Archaea	1053	Open in IMG/M
3300012356\|Ga0137371_10080055	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2534	Open in IMG/M
3300012972\|Ga0134077_10533122	All Organisms → cellular organisms → Archaea	524	Open in IMG/M
3300012976\|Ga0134076_10265978	All Organisms → cellular organisms → Archaea	735	Open in IMG/M
3300017934\|Ga0187803_10138553	All Organisms → cellular organisms → Archaea	956	Open in IMG/M
3300018088\|Ga0187771_10320839	All Organisms → cellular organisms → Archaea	1300	Open in IMG/M
3300018431\|Ga0066655_10041119	All Organisms → cellular organisms → Archaea	2327	Open in IMG/M
3300018431\|Ga0066655_10584459	All Organisms → cellular organisms → Archaea	751	Open in IMG/M
3300018431\|Ga0066655_11360899	All Organisms → cellular organisms → Archaea	513	Open in IMG/M
3300018433\|Ga0066667_10047064	All Organisms → cellular organisms → Archaea	2573	Open in IMG/M
3300018433\|Ga0066667_10474560	All Organisms → cellular organisms → Archaea	1026	Open in IMG/M
3300018468\|Ga0066662_10002583	All Organisms → cellular organisms → Archaea	8548	Open in IMG/M
3300018468\|Ga0066662_10021080	All Organisms → cellular organisms → Archaea	3658	Open in IMG/M
3300018468\|Ga0066662_12295007	All Organisms → cellular organisms → Archaea	567	Open in IMG/M
3300018482\|Ga0066669_10002390	All Organisms → cellular organisms → Archaea	7693	Open in IMG/M
3300021046\|Ga0215015_10026242	All Organisms → cellular organisms → Archaea	3390	Open in IMG/M
3300021088\|Ga0210404_10350434	All Organisms → cellular organisms → Archaea	819	Open in IMG/M
3300021171\|Ga0210405_10744692	All Organisms → cellular organisms → Archaea	754	Open in IMG/M
3300024330\|Ga0137417_1132232	All Organisms → cellular organisms → Archaea	1264	Open in IMG/M
3300024330\|Ga0137417_1298474	All Organisms → cellular organisms → Archaea	788	Open in IMG/M
3300025922\|Ga0207646_10000003	All Organisms → cellular organisms → Archaea	537256	Open in IMG/M
3300026296\|Ga0209235_1017918	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3826	Open in IMG/M
3300026296\|Ga0209235_1031233	All Organisms → cellular organisms → Archaea	2744	Open in IMG/M
3300026296\|Ga0209235_1151754	All Organisms → cellular organisms → Archaea	919	Open in IMG/M
3300026297\|Ga0209237_1157275	All Organisms → cellular organisms → Archaea	861	Open in IMG/M
3300026298\|Ga0209236_1100784	All Organisms → cellular organisms → Archaea	1300	Open in IMG/M
3300026309\|Ga0209055_1094078	All Organisms → cellular organisms → Archaea	1213	Open in IMG/M
3300026313\|Ga0209761_1131001	All Organisms → cellular organisms → Archaea	1206	Open in IMG/M
3300026314\|Ga0209268_1001152	All Organisms → cellular organisms → Archaea	13074	Open in IMG/M
3300026315\|Ga0209686_1002868	All Organisms → cellular organisms → Archaea	8025	Open in IMG/M
3300026325\|Ga0209152_10146018	All Organisms → cellular organisms → Archaea	899	Open in IMG/M
3300026335\|Ga0209804_1005167	All Organisms → cellular organisms → Archaea	7397	Open in IMG/M
3300026527\|Ga0209059_1001223	All Organisms → cellular organisms → Archaea	11753	Open in IMG/M
3300026536\|Ga0209058_1063706	All Organisms → cellular organisms → Archaea	2016	Open in IMG/M
3300026536\|Ga0209058_1209810	All Organisms → cellular organisms → Archaea	783	Open in IMG/M
3300027748\|Ga0209689_1325910	All Organisms → cellular organisms → Archaea	590	Open in IMG/M
3300027842\|Ga0209580_10041368	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2124	Open in IMG/M
3300027846\|Ga0209180_10029509	All Organisms → cellular organisms → Archaea	2949	Open in IMG/M
3300027862\|Ga0209701_10044191	All Organisms → cellular organisms → Archaea	2872	Open in IMG/M
3300027875\|Ga0209283_10005868	All Organisms → cellular organisms → Archaea	7086	Open in IMG/M
3300027875\|Ga0209283_10025627	All Organisms → cellular organisms → Archaea	3648	Open in IMG/M
3300031720\|Ga0307469_10071697	All Organisms → cellular organisms → Archaea	2299	Open in IMG/M
3300031720\|Ga0307469_10108462	All Organisms → cellular organisms → Archaea	1972	Open in IMG/M
3300031753\|Ga0307477_10000974	All Organisms → cellular organisms → Archaea	26433	Open in IMG/M
3300031753\|Ga0307477_11011838	All Organisms → cellular organisms → Archaea	545	Open in IMG/M
3300031820\|Ga0307473_11142893	All Organisms → cellular organisms → Archaea	576	Open in IMG/M
3300031962\|Ga0307479_10079458	All Organisms → cellular organisms → Archaea	3174	Open in IMG/M
3300032180\|Ga0307471_100082292	All Organisms → cellular organisms → Archaea	2838	Open in IMG/M
3300032180\|Ga0307471_101128993	All Organisms → cellular organisms → Archaea	949	Open in IMG/M
3300032180\|Ga0307471_101814007	All Organisms → cellular organisms → Archaea	761	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.10%
Aquatic	Environmental → Aquatic	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.10%
Freshwater	Environmental → Aquatic → Freshwater	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.99%
Loam	Environmental → Terrestrial → Soil → Loam	7.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	45.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.41%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	30.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.41%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10007175	3300002557	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
JGI25385J37094_100018028	3300002558	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHXGEVYATKHIAHIPEKTLPNTLWT*
JGI25385J37094_100328952	3300002558	Grasslands Soil	MVDFHYFIFIIXADAAVFGVIVFLMSYIALRLVYRMWRRSLRXPHCGEVYAARHIAHIPEKTLPNTLWT*
JGI25385J37094_101936931	3300002558	Grasslands Soil	DAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
JGI25383J37093_100007856	3300002560	Grasslands Soil	MVDFHYFIFVINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
JGI25383J37093_100062334	3300002560	Grasslands Soil	MVDFHYFIFIINADSAVFGAVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERNLPNTLWT*
JGI25383J37093_100313463	3300002560	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKALPNTLWT*
JGI25383J37093_100900661	3300002560	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHIAHIPEKTLPNTLWT*
JGI25384J37096_100092314	3300002561	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
JGI25384J37096_100404963	3300002561	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAHIPEKTLPNTLWA*
JGI25384J37096_100804823	3300002561	Grasslands Soil	ADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
JGI25382J37095_101239253	3300002562	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEAYAARHIAHIPEKALPNTLWT*
JGI25382J37095_101794812	3300002562	Grasslands Soil	ADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
JGI25382J37095_102089812	3300002562	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEIYATKHIAHIPEKTLPNTLWT*
JGI25382J43887_100171001	3300002908	Grasslands Soil	FIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
JGI25382J43887_101260741	3300002908	Grasslands Soil	DFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
JGI25386J43895_101796832	3300002912	Grasslands Soil	SAVFGAVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERNLPNTLWT*
JGI25617J43924_100377762	3300002914	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0066672_108348591	3300005167	Soil	MVDFHYFIFIINADTAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0066677_103407321	3300005171	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRHSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0066688_108134102	3300005178	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTL
Ga0066684_100662333	3300005179	Soil	VVDFHYFIFIINADSAVFGSVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERTLPNTLWT*
Ga0066676_102427402	3300005186	Soil	DAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0070708_1000043494	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAHTPEKTLPNTLWT*
Ga0070708_1010089901	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHVAHMPEKTLPNTLWT*
Ga0070707_10000007416	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHIVHIPEKTMPNTLWT*
Ga0070707_1001120303	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVDFHYFIFIINADAAVFGVIVFLMSYVALRLVYRMWRRSLRCPHCGEVYAAKHVVHIPEKAMPNTLWT*
Ga0070699_1011078792	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHIVHIPEKAMPNTLWT*
Ga0070732_100054774	3300005542	Surface Soil	MVDIHYFIFIIDGDTAIFALAVFLMSYIALRLVYRMWRRSLRCPHCGETYKPAPAPQQMAEKTLPTTLWT*
Ga0066692_100487494	3300005555	Soil	NADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
Ga0066698_100430132	3300005558	Soil	MVDFHYFIFINNADAAVFGVIVFLMSYIALRLVYRMWRRGLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0066702_104662281	3300005575	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHMAHIPEKTLPNTLWT*
Ga0066691_101052311	3300005586	Soil	MVDFHYFIFIINADAAVFGVIVFLTSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
Ga0079222_103681561	3300006755	Agricultural Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHIVHIPEKT
Ga0066660_109392612	3300006800	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLP
Ga0099829_1000198113	3300009038	Vadose Zone Soil	LVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0099829_104586981	3300009038	Vadose Zone Soil	INADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0099829_104803303	3300009038	Vadose Zone Soil	MVDFHYFIFIINADAAVFGVIVFLMSYMALRLVYRMWRRSMRCPHCGEVYAAKHIAHIPEKTLPNTLWT*
Ga0099830_100234072	3300009088	Vadose Zone Soil	MVDIHYFIFVINADSAIFGVVVFLMTYLALRLIYRMWRRTLRCPHCGEVYKAPAVSQIVEKTLPNTLWT*
Ga0099828_1000044412	3300009089	Vadose Zone Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATQHIAHIPEKTLPNTLWT*
Ga0066709_1009327001	3300009137	Grasslands Soil	VVDFHYFIFIINADSAVFGSVVFLISYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERTLPNTLWT*
Ga0127484_10395932	3300010134	Grasslands Soil	VVDFHYFIFIINADSAVFGSVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVLQVQERTLP
Ga0134082_100026109	3300010303	Grasslands Soil	FHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
Ga0134088_104211872	3300010304	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLLSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
Ga0134071_102387753	3300010336	Grasslands Soil	VDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKALPNTLWT*
Ga0126378_114402941	3300010361	Tropical Forest Soil	DMVDIHYFIFIINADTAVFGILVFLMSYVALRLVYRMWRRSLRCPHCGEAYRAQPIAHVAEKTLPNTLWT*
Ga0137388_105902651	3300012189	Vadose Zone Soil	MVDFHYFIFIINADAAVFGVIVFLMSYMALMLVYRMWRRSMRCPHCGEVYAAKHIAHIPEKTLPNTLWT*
Ga0137364_100735424	3300012198	Vadose Zone Soil	MVDFHYFIFIINADATVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATRHIAHIPEKTLPNTLWT*
Ga0137383_100325906	3300012199	Vadose Zone Soil	MVDIHYFIFIINADTAVFGVIVFLMSYIALRLVFRMWRRSLRCPHCGEIYRARPVIQVQERTLPNTLWT*
Ga0137365_100285613	3300012201	Vadose Zone Soil	MVDFHYFIFIINADSAVFGVFVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPAVVQVQERTLPNTLWT*
Ga0137365_102782452	3300012201	Vadose Zone Soil	MVDIHYFIFIINADTAVFGVIVFLMSYIALRLVFRMWRRSLRCPHCGEIYKARPVIQVQERTLPNTLWT*
Ga0137365_112841062	3300012201	Vadose Zone Soil	MVDFHYFIFIINADSAVFGAVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERTLPNTLWT*
Ga0137374_100563244	3300012204	Vadose Zone Soil	MVDIHYFIFIINADTAAFGVVVFLMSYIALRLVYMMWRRSLRCPHCGETYKAQPISHVPEKTLPNTLWT*
Ga0137374_102106132	3300012204	Vadose Zone Soil	VVDFHYFIFIINADSAVFGSAVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERALPNTLWT*
Ga0137380_100150514	3300012206	Vadose Zone Soil	MVDFHYFIFIINADSAVFGVVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPAVVQVQERTLPNTLWT*
Ga0137380_100272543	3300012206	Vadose Zone Soil	MVDFHYFIFIINADSAVFGVFVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPAVVQLQERTLPNTLWT*
Ga0137380_103985483	3300012206	Vadose Zone Soil	MVDIHYFIFIINADTAVFGVMAFLMSYIALRLVFRMWRRSLRCPHCGEIYKARPVIQVQERTLPNTLWT*
Ga0137380_104803673	3300012206	Vadose Zone Soil	FIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0137378_100064721	3300012210	Vadose Zone Soil	INADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0137377_107445783	3300012211	Vadose Zone Soil	DFHYFIFIINADAAVFGVIVFLMSYVALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
Ga0137387_103016743	3300012349	Vadose Zone Soil	MVDFHYFIFIINADATVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT*
Ga0137367_103491493	3300012353	Vadose Zone Soil	VVDFHYFIFIINADSAVFGSVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERALPNTLWT*
Ga0137371_100800553	3300012356	Vadose Zone Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPQCGEVYAARHIAHIPEKTLPNTLWT*
Ga0134077_105331221	3300012972	Grasslands Soil	DFHYFIFVINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT*
Ga0134076_102659781	3300012976	Grasslands Soil	IFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKALPNTLWT*
Ga0187803_101385532	3300017934	Freshwater Sediment	MVDIHYFIFIINGDTAIIALAVFLMSYIALRLIYRMWRRSLRCPHCGETYKPAPAPQQMPEKTIPTTLWT
Ga0187771_103208392	3300018088	Tropical Peatland	MVTVSYFIFIIDGDTAIIALVAFLLAYIALRLVYRMWRRSLRCPHCGETYKPAPAPQQIPEKTLPTTLWT
Ga0066655_100411193	3300018431	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT
Ga0066655_105844591	3300018431	Grasslands Soil	LVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAQISEKTLPNTLWT
Ga0066655_113608991	3300018431	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0066667_100470643	3300018433	Grasslands Soil	MVDFHYFIFIINADSAVFGAVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERNLPNTLWT
Ga0066667_104745602	3300018433	Grasslands Soil	VVDFHYFIFIINADSAVFGSVVFLISYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERTLPNTLWT
Ga0066662_100025839	3300018468	Grasslands Soil	MVDFHYFIFVINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0066662_100210804	3300018468	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKALPNTLWT
Ga0066662_122950071	3300018468	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIA
Ga0066669_100023902	3300018482	Grasslands Soil	VVDFHYFIFIINADSAVFGSVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERTLPNTLWT
Ga0215015_100262423	3300021046	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYVALRLVYRMWRRSLRCPHCGEVYAAKHVVHIPEKAMPNTLWT
Ga0210404_103504343	3300021088	Soil	RMVDFHYFIFIINADAAVFGVIVFLMSYVALRLVYRMWRRSLRCPHCGEVFAAKHVVHIPEKAMPNTLWT
Ga0210405_107446921	3300021171	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYVALRLVYRMWRRSLRCPHCGEVFAAKHVVHIPEKAMPNTLWT
Ga0137417_11322322	3300024330	Vadose Zone Soil	LVDFHYFIFIINADAAVFGVIIFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0137417_12984742	3300024330	Vadose Zone Soil	LVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAHIPE
Ga0207646_10000003294	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHIVHIPEKTMPNTLWT
Ga0209235_10179181	3300026296	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAHIPEKTLPNTLWA
Ga0209235_10312333	3300026296	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEAYAARHIAHIPEKALPNTLWT
Ga0209235_11517542	3300026296	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHIAHIPEKTLPNTLWT
Ga0209237_11572752	3300026297	Grasslands Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0209236_11007841	3300026298	Grasslands Soil	VDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT
Ga0209055_10940783	3300026309	Soil	DAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHMAHIPEKTLPNTLWT
Ga0209761_11310013	3300026313	Grasslands Soil	DFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAARHIAHIPEKTLPNTLWT
Ga0209268_10011529	3300026314	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRTLRCPHCGEVYAARHIAHIPEKTLPNTLWT
Ga0209686_10028688	3300026315	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRHSLRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0209152_101460182	3300026325	Soil	MVDFHYFIFIINADTAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0209804_10051671	3300026335	Soil	DAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0209059_10012233	3300026527	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHMAHIPEKTLPNTLWT
Ga0209058_10637062	3300026536	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRGLRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0209058_12098102	3300026536	Soil	DFHYFIFIINADSAVFGSVVFLMSYIALRLVYRMWRRSLRCPHCGEAYKARPVVQVQERTLPNTLWT
Ga0209689_13259102	3300027748	Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPN
Ga0209580_100413684	3300027842	Surface Soil	MVDIHYFIFIIDGDTAIFALAVFLMSYIALRLVYRMWRRSLRCPHCGETYKPAPAPQQMAEKTLPTTLWT
Ga0209180_100295093	3300027846	Vadose Zone Soil	LVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0209701_100441914	3300027862	Vadose Zone Soil	MVDIHYFIFVINADSAIFGVVVFLMTYLALRLIYRMWRRTLRCPHCGEVYKAPAVSQIVEKTLPNTLWT
Ga0209283_100058683	3300027875	Vadose Zone Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATQHIAHIPEKTLPNTLWT
Ga0209283_100256273	3300027875	Vadose Zone Soil	MVDIHYFIFVINADSAIFGVVVFLMTYLALRLIYRMWRRTLRCPHCGEVYKAPPVSQIVEKTLPNTLWT
Ga0307469_100716971	3300031720	Hardwood Forest Soil	QMVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEVYATKHIAHIPEKTLPNTLWT
Ga0307469_101084622	3300031720	Hardwood Forest Soil	MVDFHYFIFIVNADAAVFGVIVFLMSYIALRLVYRMWRRSIRCPHCGEAYATKHIAHIPEKTLPNTLWT
Ga0307477_100009743	3300031753	Hardwood Forest Soil	MVDVHYFLFIINGDTAIVALTVFLMSYIALRLVYKMWRKSLRCPHCGETYRPALAPQQMAEKTLPTSLWT
Ga0307477_110118382	3300031753	Hardwood Forest Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHIVHIPEKAMPNTLWT
Ga0307473_111428931	3300031820	Hardwood Forest Soil	YFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHIVHIPEKAMPNTLWT
Ga0307479_100794583	3300031962	Hardwood Forest Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLIYRMWRRSLRCPHCGEVYAAKHIVHIPEKAMPNTLWT
Ga0307471_1000822923	3300032180	Hardwood Forest Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYATKHIAHIPEKTLPSTLWT
Ga0307471_1011289931	3300032180	Hardwood Forest Soil	MVDFHYFIFIINADAAVFGVIVFLMSYIALRLVYRMWRRSLRCPHCGEVYAAKHVLHIPEKAMPNTLWT
Ga0307471_1018140073	3300032180	Hardwood Forest Soil	IINADAAVFGVIVFLMSYVALRLVYRMWRRSLRCPHCGEVYAAKHVVHIPEKAMPNTLWT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085526

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences