NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F085504

Metagenome Family F085504

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085504
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 80 residues
Representative Sequence MVSDDMEVELMAKLTRLMVAAAAVSLVAPGWAQDTSKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQ
Number of Associated Samples 84
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.55 %
% of genes near scaffold ends (potentially truncated) 97.30 %
% of genes from short scaffolds (< 2000 bps) 87.39 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.396 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(52.252 % of family members)
Environment Ontology (ENVO) Unclassified
(49.550 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.252 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 33.33%    β-sheet: 15.32%    Coil/Unstructured: 51.35%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF03401TctC 68.47
PF02803Thiolase_C 8.11
PF027373HCDH_N 4.50
PF007253HCDH 2.70
PF04545Sigma70_r4 0.90
PF13474SnoaL_3 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 68.47
COG0183Acetyl-CoA acetyltransferaseLipid transport and metabolism [I] 8.11
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 7.21
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 4.50
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 4.50
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 4.50
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 4.50
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 4.50
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 4.50


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.40 %
UnclassifiedrootN/A3.60 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002908|JGI25382J43887_10088027All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1658Open in IMG/M
3300005172|Ga0066683_10217707All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1180Open in IMG/M
3300005174|Ga0066680_10846671All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium547Open in IMG/M
3300005446|Ga0066686_10050780All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2529Open in IMG/M
3300005450|Ga0066682_10562106All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium721Open in IMG/M
3300005450|Ga0066682_10733175All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium603Open in IMG/M
3300005450|Ga0066682_10738509All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium600Open in IMG/M
3300005451|Ga0066681_10173462All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1279Open in IMG/M
3300005540|Ga0066697_10699699All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium555Open in IMG/M
3300005555|Ga0066692_10543510All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium735Open in IMG/M
3300005586|Ga0066691_10821937Not Available547Open in IMG/M
3300005598|Ga0066706_10380355All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1122Open in IMG/M
3300005598|Ga0066706_10483635All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae986Open in IMG/M
3300005598|Ga0066706_10734036All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium784Open in IMG/M
3300006046|Ga0066652_101450319All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium639Open in IMG/M
3300006046|Ga0066652_101558783All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium609Open in IMG/M
3300006791|Ga0066653_10025821All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2257Open in IMG/M
3300006796|Ga0066665_10095463All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae2168Open in IMG/M
3300007265|Ga0099794_10199853All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1023Open in IMG/M
3300007265|Ga0099794_10359730All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium758Open in IMG/M
3300007265|Ga0099794_10610054All Organisms → cellular organisms → Bacteria → Proteobacteria578Open in IMG/M
3300007788|Ga0099795_10047087All Organisms → cellular organisms → Bacteria → Proteobacteria1556Open in IMG/M
3300009012|Ga0066710_100005585All Organisms → cellular organisms → Bacteria11511Open in IMG/M
3300009012|Ga0066710_103841143All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium563Open in IMG/M
3300009012|Ga0066710_104719826All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium509Open in IMG/M
3300009038|Ga0099829_10285876All Organisms → cellular organisms → Bacteria1350Open in IMG/M
3300009088|Ga0099830_11708235All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium525Open in IMG/M
3300009088|Ga0099830_11872830All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium501Open in IMG/M
3300009090|Ga0099827_10506466All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1037Open in IMG/M
3300009090|Ga0099827_11239459All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium649Open in IMG/M
3300009090|Ga0099827_11393998All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium610Open in IMG/M
3300009143|Ga0099792_10366690All Organisms → cellular organisms → Bacteria → Proteobacteria873Open in IMG/M
3300010159|Ga0099796_10006912All Organisms → cellular organisms → Bacteria2935Open in IMG/M
3300010320|Ga0134109_10090079All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1058Open in IMG/M
3300010326|Ga0134065_10039556All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1417Open in IMG/M
3300011269|Ga0137392_10044657All Organisms → cellular organisms → Bacteria → Proteobacteria3303Open in IMG/M
3300011270|Ga0137391_11517835All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium515Open in IMG/M
3300012096|Ga0137389_10085790All Organisms → cellular organisms → Bacteria2471Open in IMG/M
3300012189|Ga0137388_10781629All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium885Open in IMG/M
3300012198|Ga0137364_11138544All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium586Open in IMG/M
3300012203|Ga0137399_10289696All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1351Open in IMG/M
3300012203|Ga0137399_10674315All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium870Open in IMG/M
3300012203|Ga0137399_11734531All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium513Open in IMG/M
3300012205|Ga0137362_10728930All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium851Open in IMG/M
3300012206|Ga0137380_10183819All Organisms → cellular organisms → Bacteria → Proteobacteria1900Open in IMG/M
3300012206|Ga0137380_10257425All Organisms → cellular organisms → Bacteria → Proteobacteria1572Open in IMG/M
3300012206|Ga0137380_10327999All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1368Open in IMG/M
3300012207|Ga0137381_10248696All Organisms → cellular organisms → Bacteria → Proteobacteria1545Open in IMG/M
3300012207|Ga0137381_10360093All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1268Open in IMG/M
3300012207|Ga0137381_10833447All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium799Open in IMG/M
3300012207|Ga0137381_10938036All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium748Open in IMG/M
3300012211|Ga0137377_10090759All Organisms → cellular organisms → Bacteria → Proteobacteria2886Open in IMG/M
3300012349|Ga0137387_10179066All Organisms → cellular organisms → Bacteria → Proteobacteria1518Open in IMG/M
3300012356|Ga0137371_10822173All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium707Open in IMG/M
3300012356|Ga0137371_10822174All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium707Open in IMG/M
3300012361|Ga0137360_10132242All Organisms → cellular organisms → Bacteria1955Open in IMG/M
3300012362|Ga0137361_10032753All Organisms → cellular organisms → Bacteria → Proteobacteria4137Open in IMG/M
3300012363|Ga0137390_11456319All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium627Open in IMG/M
3300012363|Ga0137390_11915291All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium521Open in IMG/M
3300012917|Ga0137395_10098103All Organisms → cellular organisms → Bacteria → Proteobacteria1943Open in IMG/M
3300012917|Ga0137395_10792215All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium686Open in IMG/M
3300012917|Ga0137395_11265967All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium512Open in IMG/M
3300012918|Ga0137396_10137469All Organisms → cellular organisms → Bacteria → Proteobacteria1772Open in IMG/M
3300012922|Ga0137394_10137404All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2076Open in IMG/M
3300012924|Ga0137413_11600910All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium532Open in IMG/M
3300012925|Ga0137419_10105751All Organisms → cellular organisms → Bacteria1957Open in IMG/M
3300012925|Ga0137419_10632008All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium863Open in IMG/M
3300012925|Ga0137419_11858174All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium516Open in IMG/M
3300012927|Ga0137416_10755695All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium857Open in IMG/M
3300012929|Ga0137404_10137191All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2020Open in IMG/M
3300012957|Ga0164303_11306817All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium537Open in IMG/M
3300012972|Ga0134077_10329793All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium646Open in IMG/M
3300014866|Ga0180090_1041661All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium768Open in IMG/M
3300015052|Ga0137411_1090420All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium557Open in IMG/M
3300015053|Ga0137405_1430063All Organisms → cellular organisms → Bacteria → Proteobacteria1817Open in IMG/M
3300015054|Ga0137420_1133141All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1138Open in IMG/M
3300015054|Ga0137420_1309059All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1378Open in IMG/M
3300017656|Ga0134112_10488046All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium520Open in IMG/M
3300018071|Ga0184618_10166486All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium908Open in IMG/M
3300018076|Ga0184609_10345196All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium695Open in IMG/M
3300018077|Ga0184633_10556265All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium548Open in IMG/M
3300018482|Ga0066669_10745862All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium864Open in IMG/M
3300020170|Ga0179594_10126851All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium933Open in IMG/M
3300021073|Ga0210378_10013683All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3354Open in IMG/M
3300021086|Ga0179596_10278228All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300024330|Ga0137417_1303388All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1610Open in IMG/M
3300026301|Ga0209238_1087893All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1071Open in IMG/M
3300026305|Ga0209688_1025280All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1150Open in IMG/M
3300026309|Ga0209055_1242468All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium556Open in IMG/M
3300026317|Ga0209154_1088811All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1326Open in IMG/M
3300026323|Ga0209472_1293027All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium520Open in IMG/M
3300026325|Ga0209152_10050846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1456Open in IMG/M
3300026332|Ga0209803_1233216All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium643Open in IMG/M
3300026499|Ga0257181_1077043All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium576Open in IMG/M
3300026538|Ga0209056_10288826All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1139Open in IMG/M
3300026548|Ga0209161_10486183All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium545Open in IMG/M
3300026551|Ga0209648_10115398All Organisms → cellular organisms → Bacteria2176Open in IMG/M
3300027383|Ga0209213_1039264All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium894Open in IMG/M
3300027669|Ga0208981_1192840All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium512Open in IMG/M
3300027882|Ga0209590_10094208All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1777Open in IMG/M
3300027882|Ga0209590_10276152All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1076Open in IMG/M
3300027903|Ga0209488_10753461Not Available694Open in IMG/M
3300028536|Ga0137415_10498636All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1025Open in IMG/M
3300028793|Ga0307299_10322057All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium580Open in IMG/M
3300031199|Ga0307495_10249465All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium510Open in IMG/M
3300031720|Ga0307469_11971058Not Available566Open in IMG/M
3300032180|Ga0307471_101035994All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium987Open in IMG/M
3300033815|Ga0364946_029209All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1085Open in IMG/M
3300034115|Ga0364945_0133119All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium740Open in IMG/M
3300034164|Ga0364940_0029967All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1409Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil52.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil23.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.60%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.70%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.70%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.80%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.80%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.90%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014866Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10DEnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M
3300034164Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25382J43887_1008802713300002908Grasslands SoilMTTPIRFVLVGAAVLLVAPVCAQDAAKTSPVRIVTKTLIASEAQKECLSLNNRQRLRYKFRADGPLNFKVSHQEEKEIIDFKRDGTDSASGS
Ga0066683_1021770713300005172SoilMVSDDVEVELMAKLARLMVAAAAVSLVAPVWAQDTSKSSPARIVTKTLVASEAQKECLSLNNRQR
Ga0066680_1084667113300005174SoilMTTPIRFVLVGAAVLLVAPVWAQDAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGT
Ga0066686_1005078033300005446SoilMTTPIRFVLVGAAVLLVAPVCAQDAAKTSPVRIVIKTLIASEAQKECLSLNNRQRLRYKFRADGPLNFKVSHQEEKEIIDFKRDGTDSASGSFVPRK
Ga0066682_1056210613300005450SoilMVSHGMEVELMAKLLRLMVAAAAVSLVSPLGAQDASKSPPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEGKEIIDFKRDATESASGSFMP
Ga0066682_1073317513300005450SoilMAWIKTDWIWCMVSDDMEVELKAKLTRLMVAAAAVSLVAPGWAQDTSKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKF
Ga0066682_1073850913300005450SoilMTRIKTDWIWCMVSDDMEVELMAKLIRLMVAAAAVSLVAPVWAQDTSKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKF
Ga0066681_1017346213300005451SoilMVSHGMEVELMAKLLRLMVAAAAVLLVSPLGAQDASKSPPPRVVTKTLVASEAQKECLSLNNRQR
Ga0066697_1069969913300005540SoilMAKLTRLMVAAAAVSLVAPGWAQDTSKSSPARIVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQE
Ga0066692_1054351023300005555SoilMTTPIRFVLVGAAVLLVAPVCAQDAAKTSPVRIVIKTLIASEAQKECLSLNNRQRLRYKFRADGPLNFKVSHQEEKEIIDFKRDGTDSASGSFVPRKAGD
Ga0066691_1082193723300005586SoilMTTAIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRL
Ga0066706_1038035513300005598SoilMTTPIRFVLVGAAVLLVAPVWAQDAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADG
Ga0066706_1048363513300005598SoilMTTPIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADG
Ga0066706_1073403623300005598SoilMVSDDMEVELMAKLIRLMVTAAAVSLVSPVWAEDASKSSPSRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDG
Ga0066652_10145031913300006046SoilMAKLIRLMVAAAAVSLVAPVWAQDTSKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVS
Ga0066652_10155878313300006046SoilMAKLTRLMVAAAAVSLVAPGWAQDTSKSSPARIVTKTLVASEAQKECLSLNNRQRLHYKF
Ga0066653_1002582133300006791SoilMTKPIRFGVIGAAILLVAPVWAQDAAKTSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEVIDLKR
Ga0066665_1009546333300006796SoilMTTPIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGTDSASGSFVPR
Ga0099794_1019985323300007265Vadose Zone SoilMVSDDMEVELMAKLIRLMVMAAAVSLVAPVWAQETSKSAPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEKEVIDLKRDGTDSASGSFIPRKS
Ga0099794_1035973013300007265Vadose Zone SoilMEVELMAKLIRLMATAAAVSLAAPAWSQDTAKNAPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEKEVIDLKRDGTDSASGSFIPRKS
Ga0099794_1061005413300007265Vadose Zone SoilMEVELMTKPIRFGVVGAAVMLVAPVWAQDAAQTSPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEKEIIDL
Ga0099795_1004708713300007788Vadose Zone SoilMVSDDMEVEFMAKPIRLLVTAAVVSLASPVWAQDASKSPPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIID
Ga0066710_100005585123300009012Grasslands SoilMTTPIRFVLVGAAVLLVAPVCAQDAAKTSPVRIVIKTLIASEAQKECLSLNNRQRLRYKFRADGPLNFKVSHQEEKEIIDFKRDGTDSA
Ga0066710_10384114313300009012Grasslands SoilMAWIKTDWIWCMVSDDMEVELMAKLTRLMVAAAAVSLVAPGWAQDTSKSSPARVVTKTLVASEAQKECLSL
Ga0066710_10471982623300009012Grasslands SoilMVSDDMEVELMAKLIRLMVTGAAVSLVSPVWAEAASKSPPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEGKEIIDFKRDGT
Ga0099829_1028587633300009038Vadose Zone SoilMEVELMTKPIRFGLIGAAVLLVAPVWAQDAAKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRAD
Ga0099830_1170823513300009088Vadose Zone SoilMEVELMTKPLRFGVVGAAVLLVAPVWAQDAAKTSPVRVVTKTLIASEAQKECLSLNNRQRLHYKFRAD
Ga0099830_1187283023300009088Vadose Zone SoilMVSDDMEVELMAKLIRLMVMAAAVSLVAPVWAQETSKSAPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEK
Ga0099827_1050646623300009090Vadose Zone SoilMEVELMTKPIRFGLIGAAVLLVAPVWAQDAAKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGT
Ga0099827_1123945923300009090Vadose Zone SoilMVPDDMEVEFMAKLIWLMVTAAVVSLVAPVWAQDTSKSSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFR
Ga0099827_1139399823300009090Vadose Zone SoilVYGSQDTEVELMTKPIRFGVVGAAVLLVAPVWAQDAAKSSPVRVVTKTLVASEAQKECLSLNNSQRLHYKFRA
Ga0099792_1036669023300009143Vadose Zone SoilMVSDDMEVELMAKLIRLVVTAGAVSLVAPVWAQDTSQSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLS
Ga0099796_1000691253300010159Vadose Zone SoilMEVDLMAKLIRLMATVAAVSLAAPAWSQDTAKNAPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEKEVIDLKRDGTDSAS
Ga0134109_1009007923300010320Grasslands SoilMVSDDMEVELMAKLTRLMVAAAAVSLVAPVWAQDTSKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEREVIDLKRDGTESASGSFMPKRSAD
Ga0134065_1003955613300010326Grasslands SoilMVSDDMEVELMAKLIRLMVTAVAVSLVSPVWAQDASKSSPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEGKEIIDFKRDAT
Ga0137392_1004465713300011269Vadose Zone SoilMVSDDMEVELMTKPIRFGVIGAAILLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSL
Ga0137391_1151783523300011270Vadose Zone SoilMVSDDMEVELMAKLIRLVVMAGAVSLVAPVWAQDTSKSSPARVVTKTLVASEAQKECLSL
Ga0137389_1008579013300012096Vadose Zone SoilMVSDHMEVELLAKLIRLMVTAGAVSLVAPVWAQDTSKSPPARVVTKTLVASEAQKECLSLNNRQRLHYKFRAD
Ga0137388_1078162913300012189Vadose Zone SoilMVSDDMEIELMANLIRVMVTAAAVSLVAPVWAQDTSKNSPARVVTKTLVASEAQKECLSLNNRQRLHYKF
Ga0137364_1113854413300012198Vadose Zone SoilMVSDDMQVELMAKLTRLMVAAAAVSLVAPGWAQDTSKSSPARIVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQ
Ga0137399_1028969613300012203Vadose Zone SoilMVSDDMEVEFMATSIRLLVTAAAVSLASPVWAQDASKSSPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKV
Ga0137399_1067431523300012203Vadose Zone SoilMEVEIMTTRIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKE
Ga0137399_1173453113300012203Vadose Zone SoilMVSDDMEVELMAKLIRLMVMAAAVSLVAPVWAQETSKTSPVRVVTKTLVASEAQKECLSLNNR
Ga0137362_1072893013300012205Vadose Zone SoilMEVEFMAKLIRLIAAVAAISLAGPAWSQDTAKNAPVRVVTKTLVASEAQKECLSLNSRQRLHYKFRADGPLNFKLSHQEEKEVIDLKRDGTESAS
Ga0137380_1018381933300012206Vadose Zone SoilMVSDDKEVELMAKLIRLMVTVAAVSLVAPVWSQDTPKTTPVRVVTKTLVASEAQ
Ga0137380_1025742533300012206Vadose Zone SoilMEVELMAKLIRLMVTAGAVSLVAPVWAEDTSKGSPARVVTKTLVASEAQKECLSLNNGQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGTESASGSF
Ga0137380_1032799923300012206Vadose Zone SoilMAWIKTDWIWCMVSDDMEVELMAKLIRLVVMAGAVSLVAPVWAQDTSKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGTESASGSF
Ga0137381_1024869633300012207Vadose Zone SoilMVSDDMEVELMAKLIRLMVTAGAVSLVAPVWAEDTSKGSPARVVTKTLVASEAQKECLSLNNGQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGTESASGSF
Ga0137381_1036009313300012207Vadose Zone SoilMEVELMTRPIRLGVVGAAVLLVAPVWAQDAAQTSPVRVVTKTLVASEAQKECLSLNNRQR
Ga0137381_1083344723300012207Vadose Zone SoilMEVEMTTPIRFVLVGAAVLLVAPVWAQDAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRAD
Ga0137381_1093803623300012207Vadose Zone SoilMVSDDVEVELMAKLARLMVAAAAVSLVAPVWAQDTSKSSPARIVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEREVIDLKRDGTESAS
Ga0137377_1009075943300012211Vadose Zone SoilMVSDDMEVELMAKLIRLVVMAGAVSLVAPVWAQDTSKSSPARVVTKTLVASEAQKECLSLNNR
Ga0137387_1017906633300012349Vadose Zone SoilMVSDDMEVELMAKLIRLMVTAGAVSLVAPVWAEDTSKGSPARVVTKTLVASEAQKECLSLNNGQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGTES
Ga0137371_1082217313300012356Vadose Zone SoilMVSDDMEVELMAKLTRLMVAAAAVSLVAPGWAQDTSKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQ
Ga0137371_1082217413300012356Vadose Zone SoilMVSDDVEVELMAKLARLMVAAAAVSLVAPVWAQDTSKSSPARIVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQ
Ga0137360_1013224233300012361Vadose Zone SoilMEVELMTTPIRFVLVGAAVLLVAPVCAQDAAKTSPVRIVIKTLIASEAQKECLSLNNRQRLRYKFRADGPLNFKVSHQEEKEIIDFK
Ga0137361_1003275313300012362Vadose Zone SoilMEVELMTTPIRFVLVGAAVLLVAPVCAQDAAKTSPVRIVIKTLIASEAQKECLSLNNRQRLRYKFRADGPLNFKVSHQEEKEIIDFKRDGTDSASGSF
Ga0137390_1145631923300012363Vadose Zone SoilMVSDDMEIELMANLIRVMVTAAAVSLVAPVWAQDTSKNSPARVVTKTLVASEAQKECLSLNNRQRLHY
Ga0137390_1191529123300012363Vadose Zone SoilMEVELMTKPLRFGVVGAAVLLVAPVWAQDAAKPSPVRVVTKTLVASEAQKECLSLNNSQRLHYKFRADGPLNFKLSH
Ga0137395_1009810333300012917Vadose Zone SoilMEVEFMAKLIRLIAAVAAISLAAPAWSQDTAKNAPVRVVTKTLVASEAQKECLSLNSRQRLHYKFRADGPLNFKLSHQEEKEVIDLKRDGT
Ga0137395_1079221523300012917Vadose Zone SoilMEVELMAKLIRLTVTAAAVSLVSPVWAEDASKSPPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSH
Ga0137395_1126596713300012917Vadose Zone SoilMVSDDMEVELMAKLIRLMVTAAAVSLVSPVWAQDASKSPPPRIVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFKRD
Ga0137396_1013746933300012918Vadose Zone SoilMEVELMTKPIRFVLVGAAVLLVAPVWAQDAAKTSPVRVVTKTLIASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEK
Ga0137394_1013740433300012922Vadose Zone SoilMVSGDVEVEFMATPIRLLVAAAAVSLASPVWAQDASKSSPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEK
Ga0137413_1160091013300012924Vadose Zone SoilMEVEFMAKLIRLTAAIAAVSLAAPVWSQDTAKNAPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEKEVIDL
Ga0137419_1010575113300012925Vadose Zone SoilMEVEIMTTPIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNFK
Ga0137419_1063200823300012925Vadose Zone SoilMVSDDMEVELMAKLIRLMVTAAAVSLAVPVWAQDTSKSPPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRA
Ga0137419_1185817423300012925Vadose Zone SoilMVSDDMEVDLMAKLIRLMATAAAVSLAAPAWSQETAKNAPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLS
Ga0137416_1075569523300012927Vadose Zone SoilMVSDDMEVELMAKLIRLMVMAAAVSLVAPVWAQETSKSSPVRVVTKTLVASEAQKECLSLNNRQ
Ga0137404_1013719113300012929Vadose Zone SoilMVSDDMEVELVAQLARLMVTAAAVSLASPVWAQDASKSSPPRVVTKTLVASEAQKECLSLNNRQRLYYKFRAEGPLNFKVSHQEEKEIIDFKRDATESASGSFMPRKS
Ga0164303_1130681723300012957SoilMEVEIMTKPIRFGMIAAAVLLVAPVWAQDAARITPVKVVTKTLVASEAQKECLSLNTRQRLHYKFRADGPLNFKLSHQEEKEVID
Ga0134077_1032979313300012972Grasslands SoilMVSDDMEVELMTKLIRLTVTAAAVSLAAPVWAQDTSKSSPPRVVTKTLVASEAQKECLSLNNRQWLHYKFRADGPLNFKVSHQEEKEIIDFKRDGTDSASGSFVPRKAG
Ga0180090_104166123300014866SoilMAIGAAVSLVAPVWAQDAARTSPVKVVTKTLVASEAQKECLSLNNRQ
Ga0137411_109042023300015052Vadose Zone SoilMARIFELMVFGAGVALVAPAWAEDAPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLSFKLSHQEEKEVIDVKRDGTDSASGSFTPRKPAD
Ga0137405_143006343300015053Vadose Zone SoilMAMTVRLMVIGAAISLASPAWAQDAPRRVVTKTLVGLEAQKECLSLTNKQRLFYKFSRRRTGEFQALAPG*
Ga0137420_113314123300015054Vadose Zone SoilMEVEIMTTPIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADG
Ga0137420_130905923300015054Vadose Zone SoilMEVELMAKLIRLMATVAAASLAAPAWSQDTAKNAPVRVVTKTLVASEAQKECL
Ga0134112_1048804613300017656Grasslands SoilMTTPIRFVLVGAAVLLVAPVWAQDAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEREIIDFKRDGTDSAS
Ga0184618_1016648623300018071Groundwater SedimentMTTPIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNF
Ga0184609_1034519623300018076Groundwater SedimentMTKPIRFGVVGVAVLLVAPVWAQDTAKPSPVRVVTKTLVASAAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEKEIIDFKRDAT
Ga0184633_1055626513300018077Groundwater SedimentMAGIFPLMVIGAAVALVAPARAQDSSKAPVRIVTKTLVASEAQKECFSLNDRQRLHYRFRADGPLDFKLTHHEEREVVDLKRGGADSAAGS
Ga0066669_1074586213300018482Grasslands SoilMAWIKTDWIWCMVSDDMEVELMAKLIRLMVAAAAVSLVAPVWAQDTSKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEREVIDLKRDGTESASGSFMPK
Ga0179594_1012685123300020170Vadose Zone SoilMVSDDMEVELVAQLARLMVTAAAVSLASPVWAQDASKSSPPRVVTKTLVASEAQKECLSL
Ga0210378_1001368333300021073Groundwater SedimentMAKLIRLMATVAAVSIAAPAWSQDTAKTAPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEKEVIDLKRDGADSASGSFIPRKSADH
Ga0179596_1027822813300021086Vadose Zone SoilMAKLIRLTAAIAAVSLAAPVWSQDTAKNAPVRVVTKTLVASEAQK
Ga0137417_130338823300024330Vadose Zone SoilMTTRIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGTDSASGSFVRARRAIIAWSGQTPANTR
Ga0209238_108789313300026301Grasslands SoilMVSDDMEVELVANLIRLVVTAAAVSLVSPVWAQDASKSSPPRVVTKTLVASEAQKECLSLNNRQRLY
Ga0209688_102528023300026305SoilMVSDDMEVELMAKLIRLMVTAVAVSLVSPAWAQDASKSSPPRVVTKTLVASEA
Ga0209055_124246823300026309SoilMVSDDMEVGPMAKLIRLMVTAAAVSLVSPVWAEDASKSSPSRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNF
Ga0209154_108881113300026317SoilMVSDDMEVELMAKLIRVMVTAAAVSLVSPVWAEDASKSSPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEGKEIIDFKRDATESASGSFM
Ga0209472_129302713300026323SoilMAKLIRLMVAAAAVSLVAPVWAQDTSKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQE
Ga0209152_1005084613300026325SoilMVSDDMEVELMAKLIRLMVTAVAVSLVSPAWAQDASKSSPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEGKE
Ga0209375_115336523300026329SoilMVSDDMEVELMAKLTRLMVAAAAVSLVAPGWAQDTSKSSPARIVTKTLVASE
Ga0209803_123321623300026332SoilMVSDHMEVELLAKLIRLMVTAGAVSLVAPVWAQDTSKSSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNFK
Ga0257181_107704313300026499SoilMTTRIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEK
Ga0209056_1028882613300026538SoilMVSDDMEVELMAKLIRLMVTAAAVSLVSPVWAEDASKSSPSRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFN
Ga0209161_1048618323300026548SoilMVSDDMEVELMAKLIRLMVTAAAVSLVSPVWAEDASKSSPSRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGTESASGSFMPRTSA
Ga0209648_1011539813300026551Grasslands SoilMAKVIRLMATVAAVSLAVPVWSQDTAKTTPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHLEEKEII
Ga0209213_103926413300027383Forest SoilMTTPIRFVLVGAAVLLVAPVWAQDAAKTSPARVVTKTLVVSEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEKEVIDLKRD
Ga0208981_119284013300027669Forest SoilMAKLIRLMVMAAAVSLVAPVWAQETSKSSPVRVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQE
Ga0209590_1009420813300027882Vadose Zone SoilMTRPGSRLDWIWCMVPDDMEVEFMAKLIWLMVTAAVVSLVAPVWAQDTSKSSPARVVTKTLVVSEAQKECLSLNNRQRLHYK
Ga0209590_1027615213300027882Vadose Zone SoilMTKPIRFGLIGAAVLLVAPVWAQDAAKSSPARVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKVSHQEEKEIIDFKRDGTESASGSFMPRTSADH
Ga0209488_1075346123300027903Vadose Zone SoilMVSDDMEVELMAKLIRLVVTAGAVSLVAPVWAQDAAQTSPVRVVTKTLVASEAQKECLSLNNRQRLHYKF
Ga0137415_1049863613300028536Vadose Zone SoilMVSDDMEVELVAQLARLMVTTAAVSLASPVWAQDASKSSPPRVVTKTLVASEAQKECLSLNNRQRLHYKFRA
Ga0307299_1032205713300028793SoilMVSDDMEVEFMAKLILLMVTAAAVSLVAPVWAQDTSKSSPARVVTKTLVASEAQK
Ga0307495_1024946523300031199SoilMVSDGMEVEFMANLVRLMVTAAAVSLASPGWAQDASKSSPPRVVTKTLVASEAQKECLSLNNRQRLHYK
Ga0307469_1197105813300031720Hardwood Forest SoilMAKAVRLIVIGAAVSLAAPAWAQDTSKSAPPRIVTKTLVASEAQKECFSLNNKQRLHYKFRADGPVSFKLSHQ
Ga0307471_10103599423300032180Hardwood Forest SoilMTKPIRFGLVGAAVLLVAPVWAQDAAQPSPVKVVTKTLVASEAQKECLSLNNRQRLHYKFRADGPLNFKLSHQEEKEIIDFKRDGTDSASGSFVPLTAGDH
Ga0364946_029209_3_1853300033815SedimentMAGIFPLMVIGAAVALVAPAGAQDASKVSPAKVVTKTLVGSEAQKECFSLNNNQQLHYRF
Ga0364945_0133119_517_7383300034115SedimentMTKPIRFGVLGAAVLLVAPVWGQDAGQTSPVKVVTKTLVASEAQKECLSLNNRQRLLYKFRADGPLNFKLSHQE
Ga0364940_0029967_1_2013300034164SedimentMEVEPMAGIFPLMVIGAAVALVAPARAQDSSKAPVRIVTKTLVASEAQKECFSLNDRQRLHYRFRAD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.