Metagenome Family F085503

Overview

Basic Information

• Family ID: F085503
• Family Type: Metagenome
• Number of Sequences: 111
• Average Sequence Length: 65 residues
• Representative Sequence: MTKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT
• Number of Associated Samples: 98
• Number of Associated Scaffolds: 111

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 76.85 %
• % of genes near scaffold ends (potentially truncated): 31.53 %
• % of genes from short scaffolds (< 2000 bps): 81.08 %
• Associated GOLD sequencing projects: 91
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (96.396 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.523 % of family members)
• Environment Ontology (ENVO): Unclassified (43.243 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (51.351 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 46.24%
  β-sheet: 0.00%
  Coil/Unstructured: 53.76%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00072	Response_reg	3.60
PF02036	SCP2	3.60
PF12200	DUF3597	2.70
PF07995	GSDH	2.70
PF01569	PAP2	1.80
PF01936	NYN	1.80
PF01183	Glyco_hydro_25	0.90
PF00487	FA_desaturase	0.90
PF00196	GerE	0.90
PF13231	PMT_2	0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	2.70
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	1.80
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.90
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.90
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.90
COG2834	Outer membrane lipoprotein-sorting protein	Cell wall/membrane/envelope biogenesis [M]	0.90
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.90
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.90
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.90

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.40 %
Unclassified	root	N/A	3.60 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.40 %
Unclassified	root	N/A	3.60 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.40 %
Unclassified	root	N/A	3.60 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	85.59 %
Unclassified	root	N/A	3.60 %

Level 5

Name	Rank	Taxonomy	Distribution
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Unclassified	root	N/A	3.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	84.68 %

Level 6

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	7.21 %
Unclassified	root	N/A	3.60 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.90 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	73.87 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.90 %

Level 7

Name	Rank	Taxonomy	Distribution
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	7.21 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Unclassified	root	N/A	3.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.87 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.90 %

Level 8

Name	Rank	Taxonomy	Distribution
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	7.21 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Unclassified	root	N/A	3.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.87 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.90 %

Level 9

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	5.41 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Unclassified	root	N/A	3.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.87 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.90 %

Level 10

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4.50 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Unclassified	root	N/A	3.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.87 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.90 %

Level 11

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4.50 %
Chthoniobacter flavus Ellin428	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %
Unclassified	root	N/A	3.60 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	73.87 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.90 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2166559005|cont_contig106550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555
2166559005|cont_contig70245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736
2170459005|F1BAP7Q01B6W05	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525
2189573000|GPBTN7E01BP0G4	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526
3300002128|JGI24036J26619_10052511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796
3300002899|JGIcombinedJ43975_10002990	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2698
3300002903|JGI24801J43971_1000774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1046
3300005175|Ga0066673_10529495	All Organisms → cellular organisms → Bacteria	692
3300005186|Ga0066676_10009139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4792
3300005186|Ga0066676_10191575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1309

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	1.80%
Environmental	Environmental	76.58%
Host-Associated	Host-Associated	21.62%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	3.60%
Modeled	Engineered → Modeled	1.80%
Plants	Host-Associated → Plants	21.62%
Terrestrial	Environmental → Terrestrial	72.97%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.71%
Roots	Host-Associated → Plants → Roots	0.90%
Sediment	Environmental → Aquatic → Sediment	1.80%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	1.80%
Soil	Environmental → Terrestrial → Soil	72.97%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.31%
Loam	Environmental → Terrestrial → Soil → Loam	9.01%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.80%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	1.80%

Subtype

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.12%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.80%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.90%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.52%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2166559005	Simulated microbial communities from Lyon, France	Engineered
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental
3300002903	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um Nextera	Environmental
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0549.00006320	2166559005	Simulated	TESGMLAVLLQRQRYKGFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT
cont_0245.00004450	2166559005	Simulated	MIKSTMTLTQSGLLPVLLQRQRYKVIQLARRSARRKRVRAAFWNTLTWLRRALTARTLAGGPRHS
E41_10296720	2170459005	Grass Soil	MIKSTMTLTQSGLLPVLLQRQHYKVIQLARRSARRKRVRAAFWNTLTWLRRALTARTLAGGLRHS
N55_08963120	2189573000	Grass Soil	KRRYVMTKSTQTLTESGMLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT
JGI24036J26619_100525111	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSTQTLTQSGLLAVLLQRQRYRVIQLARRRAHRERVHAAFGDIFTRARRALTAPKLVDRPRHT*
JGIcombinedJ43975_100029904	3300002899	Soil	MTKSTQTLTQSGMLAVLLQRQRXKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
JGI24801J43971_10007742	3300002903	Soil	MTKSTQTLTQSGMLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
Ga0066673_105294951	3300005175	Soil	MIKSTTTLTQNGVLAVLLQRQRYKVFQLARRGAYRKQVRAAFWSALTRPWRALTAPKLLDDSAEPIVG
Ga0066676_100091393	3300005186	Soil	MIKSTMTLTQSGLLPVLLQRQRYRVIQLARRGARRKRVHAAFWNTLTWLRRALTARTLAGGPRHS*
Ga0066676_101915753	3300005186	Soil	MTKLTPTLTQSGMLAVLLQRQRYKVIQLARRRAHRKQVRAALWSTLTWPWRALTAPKLLDDSA
Ga0070676_110651831	3300005328	Miscanthus Rhizosphere	MTKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
Ga0070676_111651441	3300005328	Miscanthus Rhizosphere	MTSSTQTLTQSGLLAVLLERQRYRAIQLARRRAHRKRVHAALEDIFTGARRALTAPKLVGRPRHT*
Ga0070690_1009508451	3300005330	Switchgrass Rhizosphere	MTKSTQTLTQSGMLAVLLQRQRYRVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
Ga0070666_100673275	3300005335	Switchgrass Rhizosphere	MTSSTQTLTQSGLLAVLLERQRYRAIQLARRRAHRKRVHAALEDIFTGARRALTAPKLVDRPRHT*
Ga0070666_102776202	3300005335	Switchgrass Rhizosphere	MTKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRTAFTAPKLVDGPPNT*
Ga0070667_1006435172	3300005367	Switchgrass Rhizosphere	MNVMPKSNLTLTQSGLLAVLLQHQRYKVFQLARRRAHRKQLQAAFWSAIRWPFRAL
Ga0070667_1010169621	3300005367	Switchgrass Rhizosphere	MTKSTQTLTQSGMLAVLLQRQRYRVFQLARRSAHRKRVRAAFWNTLTWSRPAFT
Ga0070710_111251382	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTKSTPTLTQSGLLAVLLQRQRYRVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
Ga0070700_1016099082	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTNSAQTLTQSGLLAVLLQRQRYRVIQLARRRAHRERVHAALEDIFTGARRALTAPKL
Ga0066687_100466682	3300005454	Soil	MTELTPTLTQSGHLAVLLQWQRYKAFRRARHCAYRKHLRAAFWNTLTWPSRAFAAPTLVDDSSKPLMGTIPRHT*
Ga0070678_1013239402	3300005456	Miscanthus Rhizosphere	MTKSTPTLTQSGLLAVLLERQRYRAIQLARRRARRKRVHAAFGDIFTGARRAITAPKLVGRPRHT*
Ga0070662_1002886561	3300005457	Corn Rhizosphere	MTKSTPTLTQSGLLAVLLQRQRYRVFQLARRSAHRKRVHAAFWNTLTWARRPKLVDRPSPHLNLH
Ga0070662_1009008351	3300005457	Corn Rhizosphere	MTSSTQTLTQSGLLAVLLERQRYRAIQLARRRAHRKRVRAAFGDTFTWARRALTAPKLVDRPRHT*
Ga0073909_100883523	3300005526	Surface Soil	MTKSTPTLTQSGLLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
Ga0070684_1016452321	3300005535	Corn Rhizosphere	MTSSTQTLTQSGLLAVLLQRQRYRVIQLARRRAHRERVHAAFGDIFTRARRALTAPKL
Ga0070697_1012373392	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTKSTPTLTQSGLLTVLLQRRRYRVFQLARRSAHRKRVRAAFWNTLTWARRPITAPKLVDRPRYT*
Ga0066697_101609993	3300005540	Soil	MRKSTPTLTQSGLLAVLLQRQRYKVFQLARRRAHRKDLRAAFWSTLTWPWRALTAPKLLDDS
Ga0066670_100775653	3300005560	Soil	MTKSTLTLTQSGLLAVLLQHQRYRIFQLARRSAHRKRMRAAFWDNLSWPRRALTVATAASGPPHT*
Ga0066708_107913431	3300005576	Soil	MIKSTTTLTQNGVLAVLLQRQRYKVFQLARRGAYRKQVRAAFWSALTRPWRALTAPKLLDDSA
Ga0068854_1007447961	3300005578	Corn Rhizosphere	MTKSTQTLTQSGLLAVLLQRQRYRVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
Ga0068864_1004121632	3300005618	Switchgrass Rhizosphere	MTSSTQTLTQSGLLAVLLERQRYRAIQLARRRAHRKRVHAALEDIFTGARRALTAPKLVDRPRH
Ga0066903_1036298392	3300005764	Tropical Forest Soil	MTRSTQTLTQSGLLAVLLECQRYKAIQSARRRVQGERVRAAFWNTLTRSRRAFTSPTLGDVAR
Ga0066903_1038353081	3300005764	Tropical Forest Soil	MTKSTQTLMQPTLTLTQSGLLALLLQRQRHRIQELARRRAQGKRLRAAFWNTLNWSRGTLPKLVEVPRHT*
Ga0068858_1022366691	3300005842	Switchgrass Rhizosphere	TLTQSGLLAVLLERQRYRAIQLARRRAHRKRVHAALEDIFTGARRALTAPKLVDRPRHT*
Ga0066696_108445792	3300006032	Soil	LTLTQSGLLAVLLQHQRYRVFQLARRSAHRKRVRAAFWDTLSWPRRALTVAAAASGAPHT
Ga0066653_100310741	3300006791	Soil	MRKSTPTLTQSGLLAVLLQRQRYKVFQLARRRAHRKDLRAAFWSTLTWPWRALTAPKLLDDSAELI
Ga0066660_105512193	3300006800	Soil	MTTLTPTLTQSGLLAVLLERQRYKVIQLARRRAHGKQVRAAFWSTFTWPFRTLTAPTLFRYDPISSPAG*
Ga0099791_101311151	3300007255	Vadose Zone Soil	MEKNVMTKSIQTLTQSGMLALLLQRQRHKVFQLARQSAHRKRVHAAFWNTLTRARLAFAAPKPVDG
Ga0105245_132358601	3300009098	Miscanthus Rhizosphere	MTKSSPTPSLTQNGLLAVLLQRQRYRVFQLARRSAHRKRVRAAFWNTLTWSRPAF
Ga0066709_1001278693	3300009137	Grasslands Soil	MTRSTQTLTQSGLLAVLLQRQRYRVIQLDRRRVHRKRVRAAFWKTLTWSRRALTAPKLVDSPGHT*
Ga0099792_109431321	3300009143	Vadose Zone Soil	MTKSVQTLTQSGLLAVLLQRQRHKVFQLARQSAHRKRVHAAFWNTLTRARLAFAAPKPVDAGAPPLNCSPGDVP*
Ga0099796_105285791	3300010159	Vadose Zone Soil	LDKKNRKLRKNYVMAKSTPTLTQSGMLAVLLQHQRYKVIQLARRRAHRKHMHATFWGTLTWPWRALT
Ga0134067_101855581	3300010321	Grasslands Soil	MTKSTSTLTQSGLLAVLLQRQRYKVFQLARRRAQRKRLRAAFWGTLTWSWRALT
Ga0150983_110038042	3300011120	Forest Soil	MTKSTETLTQSGLLAVLLQRQRDRIFQLARRRVHRKRVRAAFWNTVTWARHALTPPKLVNVSRHT*
Ga0137364_100637823	3300012198	Vadose Zone Soil	MTKLTPTLTQSGLLAVLLERQRYKVIQLARRRAHGKQVRAAFWSTFTWPFRTLTAPTLFRYDPISSPAG*
Ga0137364_104609823	3300012198	Vadose Zone Soil	MKNSKKYVMTSPATLTQSGLLAVLLQRQRYKVIQLARRRAQSKRVRAAFWNTLTWSRRALTLPTPVDVRRHT*
Ga0137382_104394552	3300012200	Vadose Zone Soil	MKNSKKYVMTSPATLTQSGLLAVLLQRQRYKVIQLARRRAQSKRVRAAFWNTLTWSRRALTLPTPVDVWRHT*
Ga0137365_100379312	3300012201	Vadose Zone Soil	MIKSTMTLTQSGLLPVLLQRQRYRVIQLARRGARRERVHAAFWNTLTWLRRALTARTLAGGPRHS*
Ga0137363_100844243	3300012202	Vadose Zone Soil	MTRSTLTLTQSGLLAVLLQRQRYRVIQLGRRRVLRKRVRAAFWKTLTWSRRALSAPKLVDSPGHT*
Ga0137399_101619443	3300012203	Vadose Zone Soil	MTKSVQTLTQSGLLAVLLQRQRHKVFQLARQSAHRKRVHAAFWNTLTRARLAFAAPKPVDGGHYT*
Ga0137362_111303761	3300012205	Vadose Zone Soil	MTRSTLTLTQSGLLAVLLQRQRYRVIQLGRRRVLRKRVRAAFWKTLTWSRRALA
Ga0137376_100940344	3300012208	Vadose Zone Soil	TQSGLLAVLLERQRYKVIQLARRRAHGKQVRAAFWSTFTWPFRTLTAPTLFRYDPISSPAG*
Ga0137376_102878263	3300012208	Vadose Zone Soil	MKNSKKYVMTSPATLTQSGLLAVLLQRQRYKVIQLARRRAQSKRVRAAFWNTLTWSRRALTSPTPVDVRRHT*
Ga0137387_103762421	3300012349	Vadose Zone Soil	MTTSPPTLTQSGLLAVLLQRQRYRAFQLARRSAHGKRMHAAFWNIFTWARRALTAPK
Ga0137372_100795912	3300012350	Vadose Zone Soil	MIKSTMTLTQGGLLPVLLQRQRYRVIQLARRGARRKRVHAAFWNTLTWLRRALTARTLAGGPRHS*
Ga0137385_101534701	3300012359	Vadose Zone Soil	MTKLTPTLTQSGLLAVLLQRQRYKVFQLARRRAHRKHLRAAFWSALTWPWRALTAPALHDDS
Ga0137385_113131971	3300012359	Vadose Zone Soil	MAKSTPTLTQSGMLAVLLQRQRYKVFQLARRHAHRKHLRAAFWSTLTWPWRALTAPKLVDESTEPI
Ga0157346_10197071	3300012480	Arabidopsis Rhizosphere	MTKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTPLTWSRPAFTAPKLVDGPPQT*
Ga0137398_101022552	3300012683	Vadose Zone Soil	MTKSVQTLTQSGLLEVLLQPQRHKVFQLARQSAHRKRVHTAVWNTLTRARLAFAAPKPVDGGHYT*
Ga0137404_104315431	3300012929	Vadose Zone Soil	MTKLTPTLTQSGLLAVLLERQRYKVIQLARRRAHGKHVRAAFWSTLTWPFRALTAPTLFRYDPISPSAG*
Ga0137407_113514932	3300012930	Vadose Zone Soil	MTKSTQTLTQSGLLPVLLQRQRYKVIQLARRRAQSKRVRTAFWNTLTWSRRALASPTPVDVGRHA*
Ga0137410_103561492	3300012944	Vadose Zone Soil	MTKSIQTLTQSGMLAVLLQRQRHRVFQLARQSAHRKRVHAAFWNTLTRARLAFAAPKPVDGGHYT*
Ga0164300_100835491	3300012951	Soil	MSKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
Ga0164299_110362021	3300012958	Soil	MRKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRNRVRAAFWNTLTWSRPAFTAPTLVDVGRQT*
Ga0164301_108661601	3300012960	Soil	MTKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRNRVRAAFWNTLTWSRPAFTAPTLVDVGRQT*
Ga0164308_110446342	3300012985	Soil	MSKSTQTLTQSGLLAVLLQRQRYRVLQLAQRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
Ga0164306_113763931	3300012988	Soil	KSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRNRVRAAFWNTLTWSRPAFTAPKLVDGPPHT*
Ga0157378_117421651	3300013297	Miscanthus Rhizosphere	MTKSTQTLTQSGMLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAP
Ga0163163_105651071	3300014325	Switchgrass Rhizosphere	MTKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPVFTAPKLVGGPPHT*
Ga0137405_11063753	3300015053	Vadose Zone Soil	MTKSTQTLTQSGLLPVLLQRQRYKVIQLARRRAQSKRVRTAFWNTLTWSRRALASPTPVDVGRHT*
Ga0137403_101446712	3300015264	Vadose Zone Soil	MTKLTPTLTQSGLLAVLLERQRYKVIQLARRRAHGKHVRAAFWSTLTWPFRALTAPTLFRYDPISSSAG*
Ga0134089_104022361	3300015358	Grasslands Soil	TALWSAGKNVFRRDYVMTKSTLTLTQSGLLAVLLQRQRYKVIQLAWRRAQRKHVRAAIWSTLTWPWHALMAPTLVDVPRDT*
Ga0132256_1020715841	3300015372	Arabidopsis Rhizosphere	MTKSTQTLTQSGMLAVLLQRQRYKVFQLARRNAHRKRVRAAFWNTLTWSRPAFTAPKLVDVRRHT*
Ga0132256_1020820611	3300015372	Arabidopsis Rhizosphere	MRKSTQTLTQSGLLAVLLQRQRYRVLQLAQRSAHRKRVRAAFWNTLTWSRPAFTAPTLVDVGRQT*
Ga0132257_1004945923	3300015373	Arabidopsis Rhizosphere	MSKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRNRVRAAFWNTLTWSRPAFTAPTLVDVGRQT*
Ga0132257_1009731502	3300015373	Arabidopsis Rhizosphere	MIKSTQTLTQSGLLAVLLQRQRYRVFQLARRSAHRKRVRAAFWNTPLTWSRPAFTAPKLVDGPPQT*
Ga0184621_102901141	3300018054	Groundwater Sediment	MTKSTQTLTQSGLLAVLLQRQRYRIIELARRRAQSKRVRTAFWNTLTWSRRALASPTPVDVGRHT
Ga0066655_100817523	3300018431	Grasslands Soil	MSKSTPTLTQSGLLAVLLQRQRYVSHLARRRADRKHQHATVWSGLTWAWRAFRSPKLLDDSGLPTVRVSRRH
Ga0066667_119191952	3300018433	Grasslands Soil	REKYVMTKSTLTLTQSGLLAVLLQHQRYRVFQLARRSAHRKRVRAAFWDTLSWPRRALTVAAAASGAPHT
Ga0190271_136285441	3300018481	Soil	MTQSTQTLTQSGMLAVLLQRQRYKAFQLARRRAHRKRMVAAFWNTLTWSRPAFTAPKLVDGPIHT
Ga0193722_10337012	3300019877	Soil	MTKSTETLTQSGLLAVLLPRQRYRVIQLARRRAQRKRVGAAFWNTLIWAQRALTAPELVDGPRRT
Ga0193713_10038226	3300019882	Soil	MTKSITQSGLLAELLEHQRRNVIELARRRAHRKQVRAVLWSILAWPWRA
Ga0193747_10001692	3300019885	Soil	MTKSITQSGLLAELLEHQRRNVIELARRRAHRKQVRAVLWSILAWPWRALKAGRRSRQVA
Ga0193727_10259763	3300019886	Soil	MTKSTQTLTQSGLLAVLLQRQRYKVIHLARRRAQSKRVRTAFWNTLTWSRRALASPTPVDVRRHT
Ga0193757_10055762	3300020008	Soil	MTKSTPTLSLTQSGLLAVLLQRQRYRVFQLARRRAHRKQMRAVLWSTLTWPFRALTARTLVDDSARPFV
Ga0193745_10175833	3300020059	Soil	MTKSVQTLTQSGLLAVLLQRQRHKVFQLARQSAHRKRVHTAFWNTLTRARLAFAAPKPIDGGALHLNRSPGSVP
Ga0210407_111314572	3300020579	Soil	MTKSTETLTQSGLLAVLLQRQRYRVIQLARRRAQRKRVGAAFWNTLIWARRALTAPELVDGPRHT
Ga0210382_102938772	3300021080	Groundwater Sediment	TLTQSGLLAVLLQRQRYAVIQLARRRAQRKHVRAAIWNILTWPWHALMAPTLVDVPRNT
Ga0210380_100774852	3300021082	Groundwater Sediment	MTQSTQTLTQSGMLAVLLQRQRSKAFQLARRRVHRERVRAAFWNTLTWSRSVFTAPKLVDGPIHT
Ga0222623_101648972	3300022694	Groundwater Sediment	MTKSTQTLTQSGLLAVLLQRQRYKVIQLARRRAQSKRVRGAFRNNLTWSRRALASPRPVDVRRHT
Ga0137417_11418232	3300024330	Vadose Zone Soil	MTKSVQTLTQSGLLAVLLQRQRHKVFQLARQSAHRKRVHAAFWNTLTRARLAFAAPKPVDGGHYT
Ga0207697_100693922	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSTQTLTQSGLLAVLLQRQRYRVIQLARRRAHRERVHAAFGDIFTRARRALTAPKLVDRPRHT
Ga0207642_103407761	3300025899	Miscanthus Rhizosphere	MTKSTQTLTQSGLLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT
Ga0207680_104442372	3300025903	Switchgrass Rhizosphere	MTSSTQTLTQSGLLAVLLERQRYRAIQLARRRAHRKRVHAALEDIFTGARRALTAPKLVDRPRHT
Ga0207684_106362791	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTKLTPTLTQSGLLAVLLQRQQYRVILLARRRAHRKQVRAAFWSILAWLLACARRHR
Ga0209802_10970233	3300026328	Soil	MRKSTPTLTQSGLLAVLLQRQRYKVFQLARRRAHRKDLRAAFWSTLTWPWRALTAPKLLDDSPEPIGG
Ga0209805_10690363	3300026542	Soil	MTELTPTLTQSGHLAVLLQWQRYKAFRRARHCAYRKHLRAAFWNTLTWPSRAFAAPTLVDDSSKPLMGTIPRHT
Ga0209474_103649633	3300026550	Soil	MTKSTLTLTQSGLLAVLLQYQRYRVFQLARRSAHRKRVRAAFWDTLSWPRRALTVAAAASGAPHT
Ga0209648_100344017	3300026551	Grasslands Soil	MTKSVQTLTQSGLLAVLLQRQRHKVFQLARQSAHRKRVHAAFWNTLTRARLAFAAPKPVDGGALHLNRSPGSVP
Ga0209388_10344203	3300027655	Vadose Zone Soil	MTKSTETLTQSGLLAVLLQRQRYRVIQLAWRRAQRKRVGAAFWNTLIWARRRLTAPELVNGPRHT
Ga0268265_119416202	3300028380	Switchgrass Rhizosphere	LLAVLLQRQRYKVFQLARRSAHRKRVRAAFWNTLTWSRPAFTAPKLVDGPPHT
Ga0137415_110318772	3300028536	Vadose Zone Soil	MTKSTETLTQSGLLAVLLQRQRYRVIQLARRRAQRKRVGAAFWNTLIWARRALTAPALVDGPRHT
Ga0307290_103198852	3300028791	Soil	MTHSTQTLTQSGLLAVLLQRQRYKVIQLARRRAQSKRVRAAFWNTLTWSQRALASPTPVDVRRHT
Ga0170824_1124988031	3300031231	Forest Soil	MSKSTPTLTQSGLLAVLLQRQRYVSYLARHRAHRKNLHTTVWSSLTWAWRAFRAPKLLDDSGLPAVRV
Ga0170820_125113611	3300031446	Forest Soil	MTKSIQTLTQSGMLAVLLQRQRHKVFQLARQSAHRKRVHAAFWNTLSRARLTFVAPMPVEAGPPRLNRSPGKVP
Ga0170820_170486791	3300031446	Forest Soil	MTKSTQTLTQSGLLAVLLQRQRYRVIQLARRRAHRKRVHAAFGDIFTGARRALTAPKLIDQPR
Ga0170819_144704941	3300031469	Forest Soil	MTKSTQTLTQSGLLAVLLQRQRYRAIQLARRRAHRKRVHAAFADIFTGARHALPAPKLVDRLRHT
Ga0306925_100348693	3300031890	Soil	MSKSTPTLTQSGLLAVLLQRQRYVSHLAQHRAHRKHLHTAVRKGLTWAWRAFRAPKLLD
Ga0307471_1038693381	3300032180	Hardwood Forest Soil	MIKSTQTLTQSGLLPVLLQRQRYKVIQLARRNGHRKRVRAAFWNTLTWLRRALTARTLAGGPRHS
Ga0307472_1006554471	3300032205	Hardwood Forest Soil	MIKSTQTLTQSGLLPVLLQRQRYKVIKLARRSAHRKRVRAAFWNTLTWLRRALTARTLAGGPRHS
Ga0310810_109671141	3300033412	Soil	MTKSTPTLTQSGLLAVLLQRQRYRVFQLARRSAHRKRVQAAFWNTLTWTRQPKLVDGPAPYLNLHQANGHVSPNP