Metagenome Family F085489

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085489
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	66 residues
Representative Sequence	VTAAIIAALRAHAAGLYPEEAGTELLIGHGGILHRDDFARFVHTGTSISDGTTLMAWIDWDAALSAL
Number of Associated Samples	103
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.41 %
% of genes near scaffold ends (potentially truncated)	90.09 %
% of genes from short scaffolds (< 2000 bps)	90.99 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.883 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.523 % of family members)
Environment Ontology (ENVO)	Unclassified (19.820 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.342 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.42% β-sheet: 10.53% Coil/Unstructured: 61.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF02371	Transposase_20	81.08
PF13683	rve_3	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	81.08

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.88 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.88 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.88 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	78.38 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	78.38 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.52 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.12 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	8.11 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.12 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	8.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.12 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	8.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.12 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	7.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.12 %
Mycobacterium canettii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii	4.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.12 %
Mycobacterium canettii CIPT 140010059	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 140010059	4.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10120311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300004091\|Ga0062387_100107747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1515	Open in IMG/M
3300005167\|Ga0066672_10041140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2600	Open in IMG/M
3300005177\|Ga0066690_10482419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	836	Open in IMG/M
3300005406\|Ga0070703_10045322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1386	Open in IMG/M
3300005437\|Ga0070710_10612962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759	Open in IMG/M
3300005445\|Ga0070708_102174877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300005471\|Ga0070698_100207952	Not Available	1892	Open in IMG/M
3300005471\|Ga0070698_100278045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1606	Open in IMG/M
3300006028\|Ga0070717_10192229	Not Available	1783	Open in IMG/M
3300006047\|Ga0075024_100693524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300006102\|Ga0075015_100127501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1305	Open in IMG/M
3300006791\|Ga0066653_10399700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300006854\|Ga0075425_100626741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1237	Open in IMG/M
3300007788\|Ga0099795_10508777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300009038\|Ga0099829_11074779	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300009525\|Ga0116220_10118489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1128	Open in IMG/M
3300009623\|Ga0116133_1035544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300009683\|Ga0116224_10587820	Not Available	532	Open in IMG/M
3300009698\|Ga0116216_10635114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300009839\|Ga0116223_10749006	Not Available	560	Open in IMG/M
3300010371\|Ga0134125_10457376	Not Available	1415	Open in IMG/M
3300012096\|Ga0137389_10243590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 140010059	1509	Open in IMG/M
3300012199\|Ga0137383_11370621	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300012202\|Ga0137363_10718244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300012285\|Ga0137370_11010714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300012355\|Ga0137369_11007375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300012356\|Ga0137371_11405193	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012361\|Ga0137360_11140050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300014169\|Ga0181531_10510123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300014489\|Ga0182018_10675259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300014654\|Ga0181525_10329948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300015359\|Ga0134085_10559901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300017657\|Ga0134074_1405516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300017821\|Ga0187812_1043822	Not Available	1516	Open in IMG/M
3300017822\|Ga0187802_10461533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300017939\|Ga0187775_10002828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4103	Open in IMG/M
3300017959\|Ga0187779_11177608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300017973\|Ga0187780_10511794	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300017974\|Ga0187777_10466930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879	Open in IMG/M
3300017994\|Ga0187822_10163672	Not Available	722	Open in IMG/M
3300017995\|Ga0187816_10054206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1681	Open in IMG/M
3300018006\|Ga0187804_10175527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300018007\|Ga0187805_10274375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300018007\|Ga0187805_10476170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300018043\|Ga0187887_10363578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300018046\|Ga0187851_10422538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300018064\|Ga0187773_10506789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300018085\|Ga0187772_10937288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300018086\|Ga0187769_10537890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300018431\|Ga0066655_10312382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300020579\|Ga0210407_11179600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	577	Open in IMG/M
3300020581\|Ga0210399_11613336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	500	Open in IMG/M
3300020583\|Ga0210401_11417375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300021171\|Ga0210405_10355697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1155	Open in IMG/M
3300021180\|Ga0210396_10174113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 140010059	1928	Open in IMG/M
3300021404\|Ga0210389_10675355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 140010059	810	Open in IMG/M
3300021405\|Ga0210387_10478102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 140010059	1107	Open in IMG/M
3300021476\|Ga0187846_10049669	Not Available	1859	Open in IMG/M
3300021559\|Ga0210409_10465568	Not Available	1126	Open in IMG/M
3300021560\|Ga0126371_11332566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	850	Open in IMG/M
3300022731\|Ga0224563_1010040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300026317\|Ga0209154_1044838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1986	Open in IMG/M
3300026322\|Ga0209687_1018712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2277	Open in IMG/M
3300026329\|Ga0209375_1059250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 140010059	1866	Open in IMG/M
3300026551\|Ga0209648_10562194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300027080\|Ga0208237_1042249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300027795\|Ga0209139_10322548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300027853\|Ga0209274_10742189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300027905\|Ga0209415_10209353	Not Available	1825	Open in IMG/M
3300027905\|Ga0209415_10476432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300028789\|Ga0302232_10461428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300028801\|Ga0302226_10469055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300030617\|Ga0311356_10755805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300030617\|Ga0311356_11345832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300031028\|Ga0302180_10248138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300031544\|Ga0318534_10550871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300031545\|Ga0318541_10756145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300031564\|Ga0318573_10431499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300031736\|Ga0318501_10542059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300031753\|Ga0307477_10314145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1081	Open in IMG/M
3300031754\|Ga0307475_10506844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	969	Open in IMG/M
3300031754\|Ga0307475_10605066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300031771\|Ga0318546_11117833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300031792\|Ga0318529_10599370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300031798\|Ga0318523_10168655	Not Available	1091	Open in IMG/M
3300031835\|Ga0318517_10031276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2138	Open in IMG/M
3300031941\|Ga0310912_10420552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300031942\|Ga0310916_11186268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300031946\|Ga0310910_10253043	Not Available	1378	Open in IMG/M
3300031962\|Ga0307479_11560489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300032039\|Ga0318559_10508207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300032039\|Ga0318559_10595513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300032044\|Ga0318558_10499548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300032059\|Ga0318533_10455816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300032060\|Ga0318505_10048813	Not Available	1807	Open in IMG/M
3300032064\|Ga0318510_10195531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300032160\|Ga0311301_10792542	Not Available	1304	Open in IMG/M
3300032180\|Ga0307471_103944689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300032205\|Ga0307472_100109278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1925	Open in IMG/M
3300032770\|Ga0335085_10248549	Not Available	2139	Open in IMG/M
3300032892\|Ga0335081_10370694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1855	Open in IMG/M
3300032892\|Ga0335081_11995273	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300032895\|Ga0335074_10149653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2956	Open in IMG/M
3300032955\|Ga0335076_10158472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2177	Open in IMG/M
3300033158\|Ga0335077_11601638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300033433\|Ga0326726_12424723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300033808\|Ga0314867_014472	Not Available	1859	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.78%
Aquatic	Environmental → Aquatic	15.32%
Plants	Host-Associated → Plants	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.48%
Freshwater	Environmental → Aquatic → Freshwater	13.51%
Peat	Environmental → Terrestrial → Peat	5.41%
Sediment	Environmental → Aquatic → Sediment	1.80%
Cave	Environmental → Terrestrial → Cave	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.51%
Loam	Environmental → Terrestrial → Soil → Loam	8.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.11%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.41%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.90%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_101203111	3300003218	Bog Forest Soil	VNAAIIAALRAHAAGLYPEEAGTELLISHGGILPRDDFASFVHTGTSISDGTTLMAWIDWDAAL
Ga0062387_1001077471	3300004091	Bog Forest Soil	VTAATAAALRACAAGYYPAEAGAELLIRHDCFLRRRDFAGFVHAGTSITDGVTPMAQIDWDAAISALHAGQLPAS
Ga0066672_100411401	3300005167	Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGSILPRDDFAGFVHTGTSISDGTTLMAWIDWDA
Ga0066690_104824192	3300005177	Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGSILPRDDFAGFVHTGTSISDGTTLMAWIDW
Ga0070703_100453221	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFVHTGTSISDDTTLMAWIDWDAALTALHD
Ga0070710_104955132	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSAALTGALRARAAGLFPDEAGTELLIRHGGILHREDFAGFVHT
Ga0070710_106129621	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VTATLPAALRACAAGLYPDEASVELLISHGGFLHRRDFGAFVHAGTSITDGITQMAHVDWDAAITALHAGQLPVSGGERRILQLTA
Ga0070708_1021748771	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTAAIIAALRAHAAGLYPEEAGTELLIGHGGILPRDDFARFVHTGTSIS
Ga0070698_1002079522	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTAALTAALRACAAGFYPSEAGTGLLISHGGFLDRPDFGAFIHAGTSISDGITEMAEIDWHAVISALQDGHLPVSGGEQRLLRLAAS
Ga0070698_1002780451	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTDTITAALRAHAAGLHPDQAGTELLIAHGRILHRDDFAGFVHTGTSIGDGTTLMAWIDWDAALSAL
Ga0070717_101922291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTAALSAALRASAAGLYPDEAGNELLISHGGFLSRSDFTGFADTFTSISDGTTPM
Ga0075024_1006935242	3300006047	Watersheds	AAGLYPEEAGTDLLIGHGGILPRDDFADFVHTGTSISDGTTLMAWIDWDAALSALHDGQIPLSGGEQRILQHPSLRGT*
Ga0075015_1001275011	3300006102	Watersheds	VTAALTAALRACAAGFYPSEAGTGLLISHGGFLGRADFGAFIHAGTSITDGITEMAEISWQDVITALHQGHLPVSGGEQRILRIAASIAGGTP
Ga0066653_103997002	3300006791	Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGSILPRDDFAGFVHTGTSISDGTTLMAWIDWDAALSALHHGQIPLCGGEQRI
Ga0075425_1006267412	3300006854	Populus Rhizosphere	VTAAIITALRAHAAGLYPEEAGTELLIRHGGILPRDDFASFVHTGTSISDGTTLMAWIDWDAALS
Ga0099795_105087772	3300007788	Vadose Zone Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFVHTGTSISDGTTLMAWIDRDAALTALHDGQIPLCSGEQRILTLAASIA
Ga0099829_110747792	3300009038	Vadose Zone Soil	VNTPTIAALRPHAAGLYPGEAGTELLIRHGSILPRDDFARFVHTGTSISDGTTLMAWIDRDAALSALHDGQI
Ga0116221_10541523	3300009523	Peatlands Soil	VTAAIIAALRAHAAGLHPDEAGTELLIGHGGILHRDDFARFVHTGT
Ga0116220_101184892	3300009525	Peatlands Soil	VTDAISAALRAHAAGIYPDEAGTELLISHGGFLRRHDFAAFVHAGTSISDSITPMAWIDCDAAITA*
Ga0116133_10355441	3300009623	Peatland	VTATLPAALRACAAGYYPAEAGTDLLIRHGCFLHRRDFAGFIHAGTSISDGITPMAE
Ga0116224_105878201	3300009683	Peatlands Soil	VTDATTAALRACAAGLYPGEAGAGLLISHGGFLHRSDFTSFVDTFTSFSDGVTPMAQINWDAVHSA
Ga0116216_106351141	3300009698	Peatlands Soil	VTDAIIAALRAYVAGLHADEAGTELLISHGGFLHRPDFRRFVATFASVSDGTPMGQIDWQSVHTAWRDGQLPV
Ga0116223_107490061	3300009839	Peatlands Soil	VTDATTAALRACAAGLYPGEAGAGLLISHGGFLHRSDFTSFVDTFTSFSDGVTPMAQINWDAVHSALHDGQLPLCGGERRILKLA
Ga0134125_104573762	3300010371	Terrestrial Soil	VTAAVIAALRARAAGLYPEEAGTEMLIRHGGILHRDDFACFVHAGTSISDGTTLMAW
Ga0137389_102435902	3300012096	Vadose Zone Soil	VTDAIITALRTCAAGLHPDEAGVELLISHGGFLGRRDFAGFVHTGTSFSDGETLMAQIDWQAAISALHDGQLPVSG
Ga0137383_113706212	3300012199	Vadose Zone Soil	VTAAIIAALRAHAAGLYPEEAGTELLICHGGILPRDDFASFVHTGTSISDGATLMAWIDWDAALTALHDGQIPVCGGEQR
Ga0137363_107182442	3300012202	Vadose Zone Soil	VNTAIIAALRAHAAGLYPEEAGTELLIRHGGILPRDDFAGFVHTGTSISDGATLMAWIDWDAALTALHDGQ
Ga0137370_110107141	3300012285	Vadose Zone Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGSILARDDFAGFGHTSTSISDGTT
Ga0137369_110073751	3300012355	Vadose Zone Soil	VTAALSAALRASAAGLYPDEAGNELLISHGGFLRRHDFAAFVHAGTSISDGTT
Ga0137371_114051931	3300012356	Vadose Zone Soil	VNTAITAAPRAHAAGLHPEEAGTDLLTGHGGILPRDDFAGYLHTGTSISDGTTLMAWIDWDAALSALHDGQIPVSGGEQSILQLAASIADGT
Ga0137360_111400502	3300012361	Vadose Zone Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFVHTGTSISDGTTLMAWIDWDAALTALHDGQIPVCSGEQRILQLA
Ga0181531_105101231	3300014169	Bog	VTDATAAALRACAAGLYPDEAAVELLISHGGFLHRSDFTSFVDTFTSLSDG
Ga0182018_106752592	3300014489	Palsa	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDVFAGFVHTGTSISDG
Ga0181525_103299481	3300014654	Bog	VNDAIIAALRAHAAGLHPEEAGTELLIGHGGILHRDDFASFVHTGTSISDDTTLMAWIDW
Ga0134085_105599012	3300015359	Grasslands Soil	VNAAIIAALRAHAAGLYPEEAGTELLIRHGSILHRDDFARFVHTGTSI
Ga0134074_14055162	3300017657	Grasslands Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFAGFVHTGTSISDGTTLMAWIDWDAALTALHDGQIPLCSGEQRILTLAA
Ga0187812_10438222	3300017821	Freshwater Sediment	VNAAIIAALRAHAAGLYPEEAGTELLIGHGGILPRDDFASFVHTGTSISDGTTLMAWIDWDAALS
Ga0187802_104615331	3300017822	Freshwater Sediment	VTGALIAALRAHAAGLYPDEAGTELLIRHGSIVHRHDFVGFVHTGTSISDGTTLMAWIDWDAALSA
Ga0187775_100028284	3300017939	Tropical Peatland	VTGAIIAALRAHAAGLHPDEAGTELLIGHGGFLPRDDFTRYLHTGTSSRDGTTLMAWIDWDAALSALHGGQIPLCGGEQRILRLA
Ga0187779_111776081	3300017959	Tropical Peatland	VTSAITTALRASAAGLYHDEAGTELLISHGGILHRPDFTGFVRTGTSISDGTT
Ga0187780_105117941	3300017973	Tropical Peatland	VTDAIIAALRAHAAGLHPDQASTELLIRHGGIVHRDDLAGFIHTGTSISDGTTLMA
Ga0187777_104669302	3300017974	Tropical Peatland	VTGAIIAALRAHAAGLHPEEAGTELLIRHGGILHRDDFAGFVHTGTSISDGTTLMAWVDWDAA
Ga0187822_101636723	3300017994	Freshwater Sediment	VSAALSAALRAHAAGLYPDEAGTDLLIRHGGILAREDFSGFVHTGTSISDGTTLLAWID
Ga0187816_100542061	3300017995	Freshwater Sediment	VTAALSVALRASAAGLYPDEAGNELLISHGGFLYRSDFTGFVDTFTSISDGTTPMAQINWDAAISAPHNGQLPVCSGERRI
Ga0187804_101755271	3300018006	Freshwater Sediment	VSAALSAALRAHAAGLYPDEAGTDLLIRHGGILAREDFSGFVHTGTSISDGTTL
Ga0187805_102743751	3300018007	Freshwater Sediment	VNAALRAHAAGLYPDEAGTDLLIGHGGILHREDFAGFVHTGTSISDGTTLLAWID
Ga0187805_104761702	3300018007	Freshwater Sediment	VTGALIAALRAHAAGLYPDEAGTELLIRHGSIVHRHDFVGFVHTGTSISDGTTL
Ga0187887_103635782	3300018043	Peatland	VTDATAAALRACAAGLYPDEAAVELLISHGGFLHRSDFTSFVDTFTSLSDGVTPMA
Ga0187851_104225381	3300018046	Peatland	VTAALPAALRACAAGYYPAEAGTDLLISHGYFLHRPDFAGFIHTGTSISDGITPMAEVDWHAAISALHAGQ
Ga0187773_105067892	3300018064	Tropical Peatland	VTGTAITALRACAAGLYPSEAGTELLISHGGFLRRSDFTSFVDTFTSSSDGATPMAQINWDALHRALHDGQ
Ga0187772_109372881	3300018085	Tropical Peatland	VNAAIIAALRAHAAGLYPEEAGTELLIRHGGILPRDDFARFVHAGTSISDGTTLMAWIDWDAALSA
Ga0187769_105378902	3300018086	Tropical Peatland	VTGPVVAALRAHAAGLYPDEAGTELLIGHGGILHRDDFARFIHTGTSIS
Ga0066655_103123821	3300018431	Grasslands Soil	VNAAIIAALRAHAAGLYPEEAGTELLIRHGSILHRDDFARFVHTGTSISDGAT
Ga0210407_111796002	3300020579	Soil	VTAVTAAALRACAAGYYPAEAGTELLIRHDCFLRRRDFAGFVHTGTSSTDGETNMAQIDWDAAISALH
Ga0210399_116133362	3300020581	Soil	VTAATAAALRACAAGYYPAEAGTELLIRHDCFLRRRDFAGFVHTGTSSTDGETNMAQI
Ga0210401_114173752	3300020583	Soil	MTGAMTAALRACAAGIHPGEAGTELLIRHGAILHRPDFTGFVHTGTSISDGTTLMAWID
Ga0210405_103556972	3300021171	Soil	VSAAIIAALRAHAAGLHPEEAGTDLLIGHGGILPRDDFARFVHTGTSISEGTTLMAWIDWDAALTALHDGQIPVCSG
Ga0210396_101741132	3300021180	Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGAILHRDDFAGFVHAGTSISDGTTLMAWIDW
Ga0210389_106753552	3300021404	Soil	VTAVTAAALRACAAGYYPAEAGTELLIQHDCFLRRRDFAGFVHAGTSITDGITEMAQIDWDAATSA
Ga0210387_104781021	3300021405	Soil	VTAATAAALRACAAGYYPAEAGTELLIRHDCFLRRRDFAGFVHTGTSSTDGETNMAQIDWDAAISALHAG
Ga0187846_100496692	3300021476	Biofilm	VNAAIIAALRAHAAGLYPEEAGTELLIGHGGILHRDDFASFVHAGTSISDGTTLMAWIDWDAALALH
Ga0210409_104655681	3300021559	Soil	VTAATTAALRACAAGLYPAEAGVELLISHDCFLHRHDFAGFVHAGTSITDAT
Ga0126371_113325662	3300021560	Tropical Forest Soil	VTAALTAALRACAAGLYPDEAGTELLISHGGFLHRPDFSRFAVTFASITDGTPMARIDWQSVHSA
Ga0224563_10100402	3300022731	Soil	VTAAITAALRARAAGLHPDEAGTELLIGHGGILPRDDFASFVHTGTSISDGTTLMAWIDWDA
Ga0209154_10448381	3300026317	Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGSILPRDDFAGFVHTGTSISDGTTLMAWIDWDAALT
Ga0209687_10187121	3300026322	Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFAGFVHTGTSISDGTTLMAWIDWDAALSALHH
Ga0209375_10592501	3300026329	Soil	VNAAIIAALRAHAAGLYPEEAGTELLIRHGSILHRDDFARFVHTGTSISDGATLMAWIDWDAALSALHDGQIPVCGGEQRI
Ga0209648_105621941	3300026551	Grasslands Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFIHTGVSISDGTTLMAWIDWDAALSALHDGQIPLCGGEQRILTLA
Ga0208237_10422492	3300027080	Forest Soil	VNAAITGALRAHAAGLHPEEVGTELLIGHGGILPRDDFARFVHTGTSISEGTTLMAWIDWDAALTA
Ga0208042_10531072	3300027568	Peatlands Soil	VTDAISAALRAHAAGIYPDEAGTELLISHGGFLRRHDFAAFVHTGTS
Ga0209139_103225482	3300027795	Bog Forest Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGAILHRDDFAGFVHAGTSISDGTTLMAWID
Ga0209274_107421891	3300027853	Soil	VTTPVTAALRARAAGLYPDEASVELLISHGGFLHRRDFAGFVHTGTSISDGTTLMAR
Ga0209415_102093531	3300027905	Peatlands Soil	VTAAIIAALRAHAAGLHPDEAGTELLIGHGGILHRDDFARFIHTGTSISDGTTLMAWIDWDAALSAL
Ga0209415_104764322	3300027905	Peatlands Soil	VTAAIIAALRAHAAGLYPEEAGTELLIGHGGILHRDDFARFVHTGTSISDGTTLMAWIDWDAALSAL
Ga0302232_104614281	3300028789	Palsa	VTDATAAALRACAAGLYPDEAAVELLIGHGGFLHRSDFTSFVDTFTSLSD
Ga0302226_104690552	3300028801	Palsa	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILHRDDFASFVHTGTSISDDTTLMAWIDWHAALTALHDGQIPVCSGEQRISS
Ga0311356_107558052	3300030617	Palsa	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILHRDDFASFVHTGTSISDD
Ga0311356_113458322	3300030617	Palsa	VTDATAAALRACAAGLYPDEAAVELLIGHGGFLHRSDFTSFVDTFTSLSDGVTPMAQIN
Ga0302180_102481382	3300031028	Palsa	VTDATAAALRACAAGLYPDEAAVELLIGHGGFLHRSDFTSFVDTFTSLSDGVTPM
Ga0318534_105508711	3300031544	Soil	VTEAITAALRAHAAGLYPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDGDAALTALHDG
Ga0318541_107561451	3300031545	Soil	VTAAIIAALRAHAAGLHPEEAGTGLLIGHGGILHRDDFARFVHTGTSISDGTTL
Ga0318573_104314992	3300031564	Soil	VSATLTAALRAHAAGLHPDEAGTGLLISHGAILHRDDFASFVHTSTSISDGTTLMAWIDWDAALRALHDGQLPGRGGE
Ga0318501_105420591	3300031736	Soil	VTEAITAALRAHAAGLYPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWI
Ga0307477_103141452	3300031753	Hardwood Forest Soil	VTAATAAALRACAAGYYPAEAGTELLIRHDCFLRRRDFAGFVHAGTSITDGITEMAQIDWDAATSALHAGQLPASGAHPV
Ga0307475_105068442	3300031754	Hardwood Forest Soil	VTAVTAAALRACAAGYYPAEAGTELLIQHDCFLRRRDFAGFVHAGTSITDGITEMAQIDWDAATSALHAGPATNCRAPPPSRPAR
Ga0307475_106050661	3300031754	Hardwood Forest Soil	VNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFVHTGTSISDGTTLMAWIDWDTALTALHDGQIPVCSGEQRILQL
Ga0318546_111178331	3300031771	Soil	VTAAITAALRAHAAGLYPGEAGTELLIRHGGILHRRDFAAFVHTGTSISDGTTLMAWIGWDAVLSALHDGQLPACDLLTELTMSG
Ga0318529_105993701	3300031792	Soil	VSATLTAALRAHAAGLHPDEAGTGLLISHGAILHRDDFASFVHTSTSISDGTTLMAWIDWDAALRALHDGQLPGRGGEQRILQ
Ga0318523_101686552	3300031798	Soil	VSATLTAALRAHAAGLHPDEAGTGLLISHGAILHRDDFASFVHTSTS
Ga0318517_100312763	3300031835	Soil	VTEAITAALRAHAAGLHPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDWDAALTALH
Ga0310912_104205522	3300031941	Soil	VTEAITAALRAHAAGLHPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDWDAALTALHD
Ga0310916_111862681	3300031942	Soil	VTEAITAALRAHAAGLYPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDGDAALTALHDGQIPPCGGEQRILQ
Ga0310910_102530432	3300031946	Soil	VTEAITAALRAHAAGLHPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDWDAALTALHDGQIPLCGGEQRIL
Ga0307479_115604891	3300031962	Hardwood Forest Soil	MTDAITAALRAAAAGILPDEAGTGLLIARGCFLHRDDFARFTRTAASITDGTLL
Ga0318559_105082071	3300032039	Soil	VTAAIIAALRAHAAGLHPEEAGTGLLIGHGGILHRDDFARFVHTGTSISDGTTLMAWIDWDAALSALHHGQIPLSGGEQRILQL
Ga0318559_105955131	3300032039	Soil	VTEAIIAALRARAAGLYPDEGGTELLIGHGGILHRDDFAAFIRTGTSSSDGSTLMAWIDR
Ga0318558_104995481	3300032044	Soil	VTEAIIAALRARAAGLYPDEGGTELLIGHGGILHRDDFAAFIRTGTSSSDGSTL
Ga0318533_104558162	3300032059	Soil	VTAAIIAALRAHAAGLHPEEAGTGLLIGHGGILHRDDFARFVHTGTSISDGTTLMAWIDW
Ga0318505_100488131	3300032060	Soil	VTEAIIAALRARAAGLYPDEGGTELLIGHGGILHRDDFAAFIRTGTSSSDGSTLMAWIDRDAALSALHH
Ga0318510_101955312	3300032064	Soil	VTEAIIAALRARAAGLYPDEGGTELLIGHGGILHRDDFAAFIRTGTSSSDGSTLMAWIDRDAALSALHHGHLPVSGGERHIIQLAAS
Ga0311301_107925421	3300032160	Peatlands Soil	VTAAIAAALRARAAGLYPDEAGTELLISHGGFLLRRDFAGFMHTGTSISDGITAMAEINWDAVISALHAGQLPLSG
Ga0307471_1039446892	3300032180	Hardwood Forest Soil	VNAALIAALRAHAAGLYPDEAGTGLLISHGAILHRDDFTSYVHTGTSI
Ga0307472_1001092781	3300032205	Hardwood Forest Soil	VSTALPGALRAHAAGLYPHEAGTELLIRHGGILLREDFAGFVHTGTSISDGTTLLA
Ga0335085_102485492	3300032770	Soil	VTAAIIAALRAHAAGLHPEEAGAELLIGHGSILPRGDFAGFVHTGTSISDGTTLMAWIDWDAALSALHDGQIPLSDLLTELTMSR
Ga0335081_103706942	3300032892	Soil	MSAALTGALRAHAAGLYPDEAGTELLIRHGGILLREDFAGFVHTGTSISDGTTLLAWIDWDAAL
Ga0335081_119952732	3300032892	Soil	VSAALTAALRAHAAGLYPGEADTELLISHGAILHRDDFTPFVHTGTSISDGTTMLAWI
Ga0335074_101496533	3300032895	Soil	VTDATAAALRARAAGLYPDEAAVELPISHGGFLHRSDFTSFVDTFTSLSTGTCNS
Ga0335076_101584723	3300032955	Soil	VSAALTGALRAHAAGLYPDEAGTELLIRHGGILLRDDFSGFVHTGTSISDGTTLMAWIDWDAALSALHH
Ga0335077_116016382	3300033158	Soil	MSAALTGALRARAAGLYPDQAGTDLLIGHGGILLREDFAGFVHTGTSISDGTTLLAWIDW
Ga0326726_124247231	3300033433	Peat Soil	VTAAITAALRAHAAGLYPGEAGTELLISHGGILHRRDFAAFVHTGTSISDGTTL
Ga0314867_014472_1_201	3300033808	Peatland	VTSAITTALRASAAGLYHDEAGTELLISHGGILHRPDFTGFVRTGTSISDGTTLMAWIDWDAATTAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085489

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences