Metagenome / Metatranscriptome Family F085484

Basic Information
Family ID	F085484
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	52 residues
Representative Sequence	MALGADRYASRGDTLVFLGCVLLSVAAMSLPARIRDPLARGLRQTVLAPFL
Number of Associated Samples	99
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	0.90 %
% of genes from short scaffolds (< 2000 bps)	0.90 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (99.099 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (35.135 % of family members)
Environment Ontology (ENVO)	Unclassified (59.459 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.568 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.16% β-sheet: 0.00% Coil/Unstructured: 46.84%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF06723	MreB_Mbl	90.09
PF01494	FAD_binding_3	2.70
PF12838	Fer4_7	2.70
PF00037	Fer4	1.80
PF01522	Polysacc_deac_1	0.90
PF01266	DAO	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	90.09
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	5.41
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.70
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	2.70
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	2.70
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.90

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
All Organisms	root	All Organisms	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
cellular organisms	root	All Organisms → cellular organisms	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.10 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.90 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10029162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1850	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.50%
Host-Associated	Host-Associated	4.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.09%
Aquatic	Environmental → Aquatic	5.41%
Plants	Host-Associated → Plants	4.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.50%
Freshwater	Environmental → Aquatic → Freshwater	2.70%
Sediment	Environmental → Aquatic → Sediment	1.80%
Floodplain	Environmental → Terrestrial → Floodplain	1.80%
Marine	Environmental → Aquatic → Marine	0.90%
Cave	Environmental → Terrestrial → Cave	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.88%
Loam	Environmental → Terrestrial → Soil → Loam	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.80%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	35.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010078	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010105	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010111	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010115	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010116	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010895	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10706531	3300002557	Grasslands Soil	MALGADRYASRGDTFAFLGCVLLSVAAMSLPERIRDPLAR
JGI25383J37093_100291621	3300002560	Grasslands Soil	MGLGADRYTSRAGTLLFVGCVTLSFAAMSLPDRVRDPLARLLRQTVLAPLLALQEQSQLLAASLSR
JGI25384J37096_101244592	3300002561	Grasslands Soil	MALGADRYASRADTLIFIGCVLLSLAAMGLPDRMREPFARTLRQTVLAPLLALQQQTERLSAALERYDAVVAQR
JGI25389J43894_10459511	3300002916	Grasslands Soil	MALGADRYASRADTLIFIGCVLLSLAAMGLPDRMREPFARTLRQTVLAPLLALQ
Ga0055498_100135962	3300004058	Natural And Restored Wetlands	MAIGTDRYASRADTLLFLACVGLSLAALSLPPQWRDQLAQGLQQSVLAPFIFLQRQ
Ga0062594_1016281292	3300005093	Soil	MGSPIGADRYGSRADTLVFLACVALSLAAMSLPASWRDPFARVLR
Ga0066684_104692152	3300005179	Soil	MAIGTDRYASRADTLLFIACVGLSIAALSLPPQWRDPLAQGLRQSILAPFLFLQRQTELLAAARYR
Ga0066678_102759601	3300005181	Soil	MALGADRYASRADTLAFIGCVLLSVAAMSLPGRVRDPFARVVR
Ga0070692_108376491	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MGSPIGADRYGSRADTLVFLACVALSLAAMSLPASWRDPFARVLRQTILAPLLT
Ga0066686_105665512	3300005446	Soil	MALGADRYASRADTLVFLGCLALSLAAMSLPPAWRDPIASALRQTVLAPFL
Ga0066689_103756172	3300005447	Soil	MALGADRYTSRVDTLVFLGCLGLSLTAMSLPPAWRDPIASVMRQTILAPLLQLQRESE
Ga0066695_103410851	3300005553	Soil	MALGADRYASRADTLVFIGCVLLSVAAMSLPDRVRDPFT
Ga0066704_100603901	3300005557	Soil	MALGADRYTSRADTLVFIGCLLLSIAAMGLPDRLREPFARAL
Ga0066670_103980432	3300005560	Soil	MALGADRYASRADTLAFVGCVLLSVAAMSLPERVRDPLARGLRQTVLAPFLTLQEKTELLSASL
Ga0066703_108476802	3300005568	Soil	MALGSDRYASRADWLLLMVCVLLSVSAMSLPDRVRDPLARVLRQTVLAPLLTLQEQTQLLAASLTRYQAVT
Ga0066691_109328611	3300005586	Soil	MALGADRYASRADTLLFVGCMLLSIAAMSLPDRWR
Ga0066653_105741371	3300006791	Soil	MALAADRYTSRADTLVFLGCVLLSLAAMSLPDRVRDPFAAALQRTVLAPFLTLQRQTDLVSASLQRYDAVL
Ga0079221_104175062	3300006804	Agricultural Soil	MAIGTDRYASRADTLLFIACVALSIAALSLPDQWRDPLAQGLRQTVLAPFLFLQRQTELLAAARYRYDAVVGERDSMALA
Ga0079221_109907142	3300006804	Agricultural Soil	MVLGADRYASRADTLAFVGCVLLSVAAMSLPERVRDPLARGLRQTVLAPFLTLQE
Ga0075433_110291901	3300006852	Populus Rhizosphere	MPLGADRYASRTDTLLFLGCVGLSIAAMSLPDHWRDPIAQGLRQTVLA
Ga0099794_100914841	3300007265	Vadose Zone Soil	MALGADRYASRGDTFAFLGCVLLSVAAMSLPERIRDPLARGLRQTVLAPFLA
Ga0099794_106300471	3300007265	Vadose Zone Soil	MAIGTDRYASRGDTLLFLTCVGLSIAALSLPDQWRDPLAQGLRQSVLAPFLFLQRQTEL
Ga0099830_100294231	3300009088	Vadose Zone Soil	MALGADRYASRADTLVFVGCMLLSITAMSLPDRWRDPIAKGLRQTV
Ga0099828_104853011	3300009089	Vadose Zone Soil	MALGADRYTSRADTLVFIGCLLLSIAAMGLPDRLREPFARALRQSVLAPLLALQQQTERL
Ga0099827_116634471	3300009090	Vadose Zone Soil	MALGADRYATRGDTFVFLVTLALSLVAMSLPPTTRDPI
Ga0099827_117001712	3300009090	Vadose Zone Soil	MALGADRYASRGDTLAFVGCLLLAIAAMSLPDRVRDPVARGLRQTVLAPFLWLQR
Ga0114129_108162242	3300009147	Populus Rhizosphere	MTIGADRYATRGDTFVLLVCVVLSLVAMSLPDRVREPMA
Ga0075423_117582661	3300009162	Populus Rhizosphere	MAIGTDRYASRGDTLLFILCVGLSIAALSLPNQWRDPLAQGLRQTVLAPFLFLQRQTELLAAARYRYD
Ga0127487_1704842	3300010078	Grasslands Soil	MAIGTDRYASRGDTLLFILCVGLSIAALSLPDQWRDPLAQGLRQSVLAPFLFL
Ga0127500_10029431	3300010103	Grasslands Soil	MALGADRYASRGDTFAFFGCVLLSVAAMSLPERIRDPLARSLRQTVLAPF
Ga0127470_10751532	3300010105	Grasslands Soil	MAIGTDRYASRADTLLFLACVGLSIAALSLPDQWRDPLAQGLRQSVLAPLLFLQRQTE
Ga0127491_11443892	3300010111	Grasslands Soil	MALGADRYASRADTLVFIGCVLLSVAAMSLPDRVRDPFTRAVRQWVL
Ga0127495_10985092	3300010115	Grasslands Soil	MAIGTDRYASRADTLLFIACVALSIAALSLPDQWRDPLAQALRQSVLAPFLFL
Ga0127466_10523051	3300010116	Grasslands Soil	MALGADRYASRGDTLVFLGCVLLSVAAMSLPERIRDPLARDL
Ga0127449_11213452	3300010117	Grasslands Soil	MAPGADRYASRADTLIFLGCVGLAVAAMSAPDGWRDPIAQGLRQTVLA
Ga0127493_10147962	3300010130	Grasslands Soil	MAIGTDRYASRADTLLFLACVGLSIAALSLPDQWRDPLAQGLRQSVLAPLLFLQRQTELLAAARYRYDEVVA
Ga0127493_11681032	3300010130	Grasslands Soil	MALGADRYASRADTLVFIGCVLLSVAAMSLPDRVRD
Ga0127459_10174321	3300010133	Grasslands Soil	MALGADRYGSRADTLVFIGCVLLSVAAMSLPDRVRDPFT
Ga0127447_10119391	3300010136	Grasslands Soil	MALGADRYASRGDTFAFLGCVLLSVAAMSLPERIRDPLARSLRQTVLAP
Ga0127456_10851611	3300010140	Grasslands Soil	MAIGTDRYASRADTLLFIACVVLSIAALSLPDQWRDPLAQGLRQSVLAPLLFLQRQTEL
Ga0127456_11373182	3300010140	Grasslands Soil	MALGADRYASRADTLVFIGCMLLSIAAMSLPDRWRDPLAKGLRQTVLAPFLWLQQQTG
Ga0134084_102799912	3300010322	Grasslands Soil	MALGSDRYASRADWLLLIACVLLSVAAMGLPGRLRDPVARLLRQTVLAPFL
Ga0134065_103332171	3300010326	Grasslands Soil	MALGADRYASRADTLVFIGCMLLSIAAMSLPDGWRDPLAK
Ga0134111_100458331	3300010329	Grasslands Soil	MALGADRYASRADTLIFIGCVLLSLAAMGLPDRMREPFARTLRQTVLAPLLA
Ga0134111_103187432	3300010329	Grasslands Soil	MAIGTDRYASRADTLLFIACVGLSIAALSLPDQWRDPLAQGLRQTVLAPFLFLKRQTELL
Ga0134063_105363661	3300010335	Grasslands Soil	MALAADRYTSRADTLVFLGCVLLSLAAMSLPDRVRDPFAAALQRTVLAPFLTLQ
Ga0134063_106918992	3300010335	Grasslands Soil	MALGADRYTSRVDTLVFLGCLGLSLTAMSLPPAWRDPIASVMRQT
Ga0134127_118613552	3300010399	Terrestrial Soil	MPLGADRYASRADTLLFLGCVGLSVAAMSLPDTWRDPIAQGLRQT
Ga0134123_109370602	3300010403	Terrestrial Soil	MAIGTDRYASRGDTLLFILCVGLSIAALSLPDQWRDRLAQGLRQTVLAPFLFLQRQTELLAAARYRY
Ga0138113_1322181	3300010895	Grasslands Soil	MALGADRYASRADTFIFIGCVLLSLAAMGLPDRMRDPFARTLRQTVLA
Ga0137377_118571272	3300012211	Vadose Zone Soil	MALGSDRYASRADWLLLIGCVFLSVVAMGLPGRLRDPVARALRQTV
Ga0137447_10149241	3300012226	Soil	MPLGADRYASRAGTLLFLGCVGLSVAAMSLPDTWRDPIAQGLRQTVLAPFLALQ
Ga0137372_108221912	3300012350	Vadose Zone Soil	MVIGTDRYASRADTLLFIAFVALSIAALSLPDQWRDPLAQGLRQSVLAPFLFLQRQTELLAAA
Ga0134022_10649471	3300012371	Grasslands Soil	MALGADRYASRGDTLVFLGCVLLSAVAMSLPERIRDPLAR
Ga0134042_10094371	3300012373	Grasslands Soil	MAIGTDRYASRGDTLLFILCVGLSIAALSLPDQWRDPLAQGLRQSVLAPFLFLQ
Ga0134042_11678731	3300012373	Grasslands Soil	MALGADRYASRADTLLFVGCMLLSIAAMSLPDRWRDPLAKGL
Ga0134058_11446662	3300012379	Grasslands Soil	MALGADRYASRGDTFAFLGCVLLSVAAMSLPERIRDPLARGLRQTVLAPFLTLQQQTELLSASLARYDA
Ga0134046_12211441	3300012386	Grasslands Soil	MAIGTDRYASRADTLLFIACVGLSIAALSLPDQWRDPLAQGLRQSVLAPFLFL
Ga0134046_12506831	3300012386	Grasslands Soil	MVIGTDRYASRADTLLFIACVALSIAALSLPDQWRDPLAQGLRQSVLAPFLFLQ
Ga0134054_10228382	3300012390	Grasslands Soil	MALGADRYASRADTLIFIGCVLLSIAAMGLPDRMRDPFARALRQTVLAPLLALQQQ
Ga0134051_13209922	3300012398	Grasslands Soil	MAIGTDRYASRADTLLFIACVGLSIAALSLPDQWRDPLAQGLRQTVLAPFLFLQRQTELLAAARYR
Ga0134061_13095042	3300012399	Grasslands Soil	MAIGTDRYASRADTLLFIACVVLSIAALSLPDQWRDPLAQVLRQSVLAPLLFLQR
Ga0134061_13325532	3300012399	Grasslands Soil	MAIGTDRYASRADTLLFLACVGLSIAALSLPDQWRDPLAQGLRQSVLAPLLFLQRQ
Ga0134059_10218402	3300012402	Grasslands Soil	MAIGTDRYASRADTLLFLVYVGLSIAALSLPDQWRDPLAQGLRQSVLAPLLFLQRQTELLAAARYRYD
Ga0134059_10279952	3300012402	Grasslands Soil	MALGADRYASRGDTFAFLGCVLLSVAAMSLPERIRDPLARGLRQTVLAPFLTLQQQTELLSASLARYDAVV
Ga0134050_10238441	3300012407	Grasslands Soil	MAIGTDRYASRGDTLLFIACVGLSIVALSLPDQWRDPLAQGLRQSVLAPFLFLQR
Ga0134045_12494671	3300012409	Grasslands Soil	MALRADRYASRADTLVFLGCVLLSLAAMSLPERVR
Ga0134060_15235422	3300012410	Grasslands Soil	MALGADRYASRADTLVFLGCLALSLAAMSLPPAWRDPIASALRQTVLAPFLELQRESE
Ga0137404_118436911	3300012929	Vadose Zone Soil	MAIGTDRYASRGDTLLFIACVGLSIAALSLPDQWRDPVAQGLRQSVLAPCLFLQRQTELLAAAR
Ga0137410_105050672	3300012944	Vadose Zone Soil	MPLGADRYASRADTLLFLGCVGLSVAAMSLPDRWRDPIAQGLRQTVLA
Ga0134077_101410312	3300012972	Grasslands Soil	MALAADRYTSRADTLVFLGCVLLSLAAMSLPDRVRDPFAAALQR
Ga0134087_106783392	3300012977	Grasslands Soil	MVIGTDRYASRADTLLFIAFVALSIAALSLPDQWRDPLAQGLRQSVLAPFLFLQRQTE
Ga0134073_102659761	3300015356	Grasslands Soil	MALAADRYTSRADTLVFLGCVLLSLAAMSLPDRVRDPFAA
Ga0132256_1002643494	3300015372	Arabidopsis Rhizosphere	MAIGTDRYASRADTLLFLACVGLSIAALSLPPQWREPLANGLQQSVLAPFIVLQRQ
Ga0134069_10327381	3300017654	Grasslands Soil	MGLGADRYTSRAGTLLFVGCVALSFAAMSLPDRVRDPL
Ga0187779_112208371	3300017959	Tropical Peatland	MALGVDRHTSRSDMLLFVVCVLLSVSAMVLPDRIRDPMARALRQTVLAPLLSLQEQSQLLVASLSRYQGVVAE
Ga0184640_104603392	3300018074	Groundwater Sediment	MALGADRYATRGDTLGFLGCVALSLVAMSLPASTRDP
Ga0066667_112630992	3300018433	Grasslands Soil	MALGADRYASRGDTLVFLGCVLLSVAAMSLPARIRDPLARGLRQTVLAPFL
Ga0180119_11817032	3300019228	Groundwater Sediment	MAIGTDRYASRADTLLFIACVGLSIAALSLPPQWRDQLAQGLQQSVLAPFIFLQRQ
Ga0184646_13261682	3300019259	Groundwater Sediment	MAFGADRYTTRGDTLVFLGCVALSLLAMSLTAGLR
Ga0187894_100470714	3300019360	Microbial Mat On Rocks	MALGADRYATRGDTFVLLCCVALSLVAMSLPEQVRVPVASGLRR
Ga0193756_10307072	3300019866	Soil	MALGADRYASRGDTFAFLGCVLLSVAAMSLPERIRD
Ga0193725_10047571	3300019883	Soil	MPLGADRYASRADTLLFLGCVGLSVAAMSLPDAWRDPIAQGLRPTVL
Ga0222624_15779602	3300021951	Groundwater Sediment	MPLGADRYASRADTLLFLGCVGLSIAAMSLPDHWRDPIAQGLRQTVLAPFLA
Ga0247672_10995791	3300024187	Soil	MAIGTDRYASRADTLLFLACVGLSIAALSLPPQWREPLANGLQQSVLAPFIVLQRQT
Ga0247680_10415072	3300024246	Soil	MALGADRYATRGDTFVFVVTLALSLVAMSLPPTTRDPI
Ga0207684_102622441	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MALGADRYATRGDTFVFLVTLALSLVAMSLPPTTRDPIASSL
Ga0207693_103670162	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MALGADRYASRADTLVFLGCVLLSAVAMSLPGRLRDPL
Ga0207646_105702881	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAIGTDRYASRADTLLFITCVALSIAALSLPDQWRDPLAQGLRQTVLAPFLFLQRQTELLAAARY
Ga0209350_10348741	3300026277	Grasslands Soil	MALGADRYTSRADTLVFIGCLLLSIAAMGLPDRLREPFARALRQ
Ga0209238_10806312	3300026301	Grasslands Soil	MALGADRYASRADTLVFLGCLALSLAAMSLPPAWRDPIASALRQTVLAPFLQLQR
Ga0209761_10214081	3300026313	Grasslands Soil	MAIGPDRYASRGDTLLFIACVGLSVAALSLPDQWRDPLAQGLRQSVLAPFLFLQ
Ga0209154_11226061	3300026317	Soil	MALGADRYASRADTLLFVGCMLLSIAAMSLPDRWRDPLAKGLRQTVLAPFLWLQQQTGLLAASLSSYDGVV
Ga0209471_10683544	3300026318	Soil	MALGADRYASRGDTLVFLGCVLLSAAAMSLPARLRDPL
Ga0209802_11488681	3300026328	Soil	MALGADRYASRADTLVFLGCVLLSGAAMSLPGRLRDPLARALRQTVLAPF
Ga0209158_13201222	3300026333	Soil	MALGADRYASRADTLAFIGCVLLSVAAMSLPERVRDPF
Ga0209378_13146502	3300026528	Soil	MALGADRYASRADTLVFIGCMLLSIAAMSLPDGWRDPLAKGLRQTVLAPFLWLQQQTGLL
Ga0209157_11077702	3300026537	Soil	MALGADRYTSRADTLVFLGCVLLSLAAMSLPDGVRDRFAAALQRTVLAPFLA
Ga0209376_11574972	3300026540	Soil	MALGADRYASRADTLVLLGCLGLSLAAMSLPPAWRDPVASAMR
Ga0209805_13040582	3300026542	Soil	MALGADRYASRADTLVFLGCVLLSAAAMSLPGRLRDPLA
Ga0209689_14053152	3300027748	Soil	MALGADRYGSRAGTLLFVGCVALSFAAMSLPDRVRDPLARGLRQTVLAPLLALQEQSQLLAASLSRYETVVAERD
Ga0209074_102779042	3300027787	Agricultural Soil	MALAADRYGSRADTLAFLGCVVLSVAAMSLPQRIRDPLARGLRQTVLAPLLTLQRQIELLAASLERYD
Ga0209701_106226232	3300027862	Vadose Zone Soil	MAIGTDRYASRGDTLLFVACVGLSIAALSLPDQWRDPLAQGLRQSVLAPFLFLQR
Ga0209814_103156491	3300027873	Populus Rhizosphere	MAIGTDRYASRADTLLFIACVALSIAALSLPDQWRDPLAQGLRQTVLAPFLFLQRQTELL
Ga0137415_112076231	3300028536	Vadose Zone Soil	MALGADRYTSRVDTLVFLGCLGLSLTAMSLPPAWRDPIAS
Ga0137415_114868472	3300028536	Vadose Zone Soil	MALGADRYASRADTLLFVGCMLLSIAAMSLPDRWRDPLA
Ga0307468_1000926091	3300031740	Hardwood Forest Soil	MAIGTDRYASRADTLLFITCVALSIAALSLPDQWRDPLAQGLRQTVLAPFLFLQRQTELLAAARYRYD
Ga0307479_103586973	3300031962	Hardwood Forest Soil	MALGADRYASRADTLVFLGCVLLSGAAMSLPGRLRDPLARALRQTVLAPFLS
Ga0307471_1002991824	3300032180	Hardwood Forest Soil	MALGADRYASRADALVFIACVVLSVAAMGLPESWRQPIARGLRATVLAP
Ga0364928_0061075_3_176	3300033813	Sediment	MAIGTDRYASRADTLLFLGCVGLSVAALSLPVHWRDPLAQGLRQSVLAPFLFLQRQTE
Ga0364931_0038083_2_130	3300034176	Sediment	MPLGADRYASRAGTLLFLGCVGLSVAAMSLPDTWRDPIAQGLR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085484

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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