Metagenome / Metatranscriptome Family F085470

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085470
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	78 residues
Representative Sequence	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNKRTNWLEI
Number of Associated Samples	89
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.31 %
% of genes near scaffold ends (potentially truncated)	30.63 %
% of genes from short scaffolds (< 2000 bps)	83.78 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.396 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.631 % of family members)
Environment Ontology (ENVO)	Unclassified (57.658 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.550 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.71% β-sheet: 15.19% Coil/Unstructured: 48.10%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF14833	NAD_binding_11	50.45
PF03150	CCP_MauG	22.52
PF00248	Aldo_ket_red	1.80
PF02915	Rubrerythrin	1.80
PF13493	DUF4118	1.80
PF08240	ADH_N	0.90
PF01988	VIT1	0.90
PF07690	MFS_1	0.90
PF00196	GerE	0.90
PF03364	Polyketide_cyc	0.90
PF10604	Polyketide_cyc2	0.90
PF01471	PG_binding_1	0.90
PF07681	DoxX	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	22.52
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.90
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.90
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.90
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.40 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.40 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.40 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	16.22 %
Unclassified	root	N/A	3.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.23 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	16.22 %
Unclassified	root	N/A	3.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.23 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	4.50 %
Unclassified	root	N/A	3.60 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.90 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.50 %
Unclassified	root	N/A	3.60 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.50 %
Unclassified	root	N/A	3.60 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.90 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.50 %
Unclassified	root	N/A	3.60 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.90 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.50 %
Unclassified	root	N/A	3.60 %
unclassified Opitutus	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus	0.90 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.50 %
Unclassified	root	N/A	3.60 %
Opitutus sp. GAS368	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. GAS368	0.90 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16529589	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	2398	Open in IMG/M
2088090014\|GPIPI_17471436	All Organisms → cellular organisms → Bacteria	4403	Open in IMG/M
2228664022\|INPgaii200_c1107055	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300004114\|Ga0062593_102798397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300004156\|Ga0062589_100572398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300005181\|Ga0066678_10420192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300005289\|Ga0065704_10313950	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005293\|Ga0065715_10888994	Not Available	558	Open in IMG/M
3300005294\|Ga0065705_10492317	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005328\|Ga0070676_10006528	All Organisms → cellular organisms → Bacteria	6234	Open in IMG/M
3300005343\|Ga0070687_101063897	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005543\|Ga0070672_101123308	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005549\|Ga0070704_101124800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300005559\|Ga0066700_10787923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300005559\|Ga0066700_11103877	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005561\|Ga0066699_10913680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300005568\|Ga0066703_10436356	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005576\|Ga0066708_10117576	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300005843\|Ga0068860_100501469	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300006794\|Ga0066658_10185147	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300007255\|Ga0099791_10130345	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300007258\|Ga0099793_10417791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300009012\|Ga0066710_104595587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300009553\|Ga0105249_10273996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300010373\|Ga0134128_12748763	Not Available	542	Open in IMG/M
3300010376\|Ga0126381_100390084	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300012198\|Ga0137364_10303243	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300012199\|Ga0137383_10046980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3077	Open in IMG/M
3300012200\|Ga0137382_10813723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300012203\|Ga0137399_10185244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1683	Open in IMG/M
3300012204\|Ga0137374_10635051	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300012208\|Ga0137376_10398768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1195	Open in IMG/M
3300012208\|Ga0137376_11015208	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300012208\|Ga0137376_11373852	Not Available	597	Open in IMG/M
3300012210\|Ga0137378_10123461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2390	Open in IMG/M
3300012210\|Ga0137378_11001559	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300012211\|Ga0137377_10412507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1289	Open in IMG/M
3300012211\|Ga0137377_10944803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300012349\|Ga0137387_11232140	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300012350\|Ga0137372_10062460	All Organisms → cellular organisms → Bacteria	3238	Open in IMG/M
3300012350\|Ga0137372_10120571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2175	Open in IMG/M
3300012350\|Ga0137372_10848970	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012354\|Ga0137366_10809567	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300012358\|Ga0137368_10480239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300012362\|Ga0137361_10656028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300012362\|Ga0137361_11085633	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012685\|Ga0137397_10713501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300012918\|Ga0137396_10908305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300012922\|Ga0137394_10757489	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300012922\|Ga0137394_11069580	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300012923\|Ga0137359_10261384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1543	Open in IMG/M
3300012923\|Ga0137359_10730013	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300012925\|Ga0137419_10300905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1226	Open in IMG/M
3300012927\|Ga0137416_11322385	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300012929\|Ga0137404_11106079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300012929\|Ga0137404_11254098	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300012930\|Ga0137407_10006827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7854	Open in IMG/M
3300013297\|Ga0157378_10106478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2565	Open in IMG/M
3300014968\|Ga0157379_10388231	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300017997\|Ga0184610_1152339	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300017997\|Ga0184610_1192688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300018000\|Ga0184604_10120180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	837	Open in IMG/M
3300018027\|Ga0184605_10145542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300018027\|Ga0184605_10397161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300018028\|Ga0184608_10286713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300018054\|Ga0184621_10278059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300018061\|Ga0184619_10186337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300018066\|Ga0184617_1183280	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300018071\|Ga0184618_10065629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356	Open in IMG/M
3300018071\|Ga0184618_10273701	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300018076\|Ga0184609_10129194	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300018076\|Ga0184609_10413151	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300018081\|Ga0184625_10203506	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300018433\|Ga0066667_12086391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018465\|Ga0190269_10420992	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300019866\|Ga0193756_1040949	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300019879\|Ga0193723_1120925	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300019881\|Ga0193707_1028413	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300019881\|Ga0193707_1174792	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300019886\|Ga0193727_1011208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3438	Open in IMG/M
3300019886\|Ga0193727_1023620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. GAS368	2169	Open in IMG/M
3300019886\|Ga0193727_1064096	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300019887\|Ga0193729_1144601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300019890\|Ga0193728_1041633	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300019890\|Ga0193728_1290048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300020003\|Ga0193739_1061686	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300020004\|Ga0193755_1205948	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300020006\|Ga0193735_1091295	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300020018\|Ga0193721_1075611	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300020022\|Ga0193733_1025089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1683	Open in IMG/M
3300021078\|Ga0210381_10189404	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300021080\|Ga0210382_10158297	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300021344\|Ga0193719_10004337	All Organisms → cellular organisms → Bacteria	5774	Open in IMG/M
3300021344\|Ga0193719_10321844	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300022534\|Ga0224452_1059899	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300022756\|Ga0222622_10103836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1753	Open in IMG/M
3300025290\|Ga0207673_1069563	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300025315\|Ga0207697_10004311	All Organisms → cellular organisms → Bacteria	6816	Open in IMG/M
3300025901\|Ga0207688_10200463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1196	Open in IMG/M
3300025923\|Ga0207681_10004279	All Organisms → cellular organisms → Bacteria	8812	Open in IMG/M
3300025923\|Ga0207681_10081387	All Organisms → cellular organisms → Bacteria	2286	Open in IMG/M
3300025933\|Ga0207706_10141766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2114	Open in IMG/M
3300025961\|Ga0207712_11633083	Not Available	578	Open in IMG/M
3300025986\|Ga0207658_10019860	All Organisms → cellular organisms → Bacteria	4649	Open in IMG/M
3300026309\|Ga0209055_1058841	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300026542\|Ga0209805_1298489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300026557\|Ga0179587_10358368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	947	Open in IMG/M
3300028381\|Ga0268264_10635241	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300028791\|Ga0307290_10335302	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300028884\|Ga0307308_10168466	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300030839\|Ga0073999_10991453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.68%
Host-Associated	Host-Associated	15.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.47%
Aquatic	Environmental → Aquatic	16.22%
Plants	Host-Associated → Plants	15.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.47%
Sediment	Environmental → Aquatic → Sediment	14.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.31%
Freshwater	Environmental → Aquatic → Freshwater	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Loam	Environmental → Terrestrial → Soil → Loam	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.02%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.70%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030839	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01783510	2088090014	Soil	MNINSKLLAFATGVVLTALLHLGGLWANNKRWESEMVNRGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQPTKRRDLLRI
GPIPI_01614550	2088090014	Soil	MKINSKLLAFATGVALTALLHLGALWANNKRWESEMVNHGWGYWKWSIYDKMDWDGNQPVQFHWNDQPKPTKGTARREISL
INPgaii200_11070552	2228664022	Soil	VNINTKLLAVATGVALTALVHLGGVWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFQWNDPPKPAKAKKSLEI
Ga0062593_1027983971	3300004114	Soil	MKINTKLLAFATGVALTALLHLGGLWANNKRWESEMINHGWGYWKWNIYDKMDWDGNQPLKFHWNNQPQTTRRTNWLEI*
Ga0062589_1005723982	3300004156	Soil	NIKMKINTKLLAFATGVALTALLHLGGLWANNKRWESEMINHGWGYWKWNIYDKMDWDGNQPLKFHWNNQPQTTRRTNWLEI*
Ga0066678_104201922	3300005181	Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDTMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0065704_103139501	3300005289	Switchgrass Rhizosphere	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNVYDKMDWDGNQPLEFHWNDQPQTNKRTDWIEI*
Ga0065715_108889941	3300005293	Miscanthus Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDPPKPAKAKKSLEI*
Ga0065705_104923172	3300005294	Switchgrass Rhizosphere	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLQFHWNDQPQTNKRTNWLEI*
Ga0070676_100065285	3300005328	Miscanthus Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKWWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFQWNDPPKPAKAKKSLEI*
Ga0070687_1010638971	3300005343	Switchgrass Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDPPKP
Ga0070672_1011233082	3300005543	Miscanthus Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDPPKPAAKAKKSLEI*
Ga0070704_1011248002	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDPPKPAKAKKSLEI*
Ga0066700_107879232	3300005559	Soil	CDDRAKVAPSCDGTASLSQLQYHMNMNSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0066700_111038771	3300005559	Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRI
Ga0066699_109136802	3300005561	Soil	ATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDTMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0066703_104363562	3300005568	Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0066708_101175761	3300005576	Soil	PGFLGHLRLPHDDPSKATGLSGGTTASSQLKYQMNINSKLLAFATGVTLTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNTDWDGNQPLEFHWNDHPKPTKPTNGVEI*
Ga0068860_1005014692	3300005843	Switchgrass Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNVYDKMDWDGNQPLEFHWNDPPKPAKAKKSLEI*
Ga0066658_101851471	3300006794	Soil	QLQYHMNINSKLLAFATGVALTALLYLGGLWANNKRRESEMVNHGWDYCQWNIYDTMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0099791_101303452	3300007255	Vadose Zone Soil	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLKFYWNRQPKPTKQAKWLRI*
Ga0099793_104177912	3300007258	Vadose Zone Soil	LTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0066710_1045955871	3300009012	Grasslands Soil	KATGLSGGTTASSQLKYQMNINSKLLAFATGVTLTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNTDWDGNQPLEFHWNDHPKPTKPTNGVEI
Ga0105249_102739962	3300009553	Switchgrass Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNVYDKMDWDGNQPLEFQWNDPPKPAKAKKSLEI*
Ga0134128_127487631	3300010373	Terrestrial Soil	DINVNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDPPKPAKAKKSLEI*
Ga0126381_1003900844	3300010376	Tropical Forest Soil	VKINSNLLAFATGVALTALLHGASLWANNKRWESDMVDHGWGYWKWNIYDRMDWDGNQPLEFHWNDHPKATKPPRIEI*
Ga0137364_103032432	3300012198	Vadose Zone Soil	MNINSKLLAFATGVTLTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNTDWDGNQPLEFHWNDHPKPTKPTNGVEI*
Ga0137383_100469802	3300012199	Vadose Zone Soil	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNKRTNWLEI*
Ga0137382_108137231	3300012200	Vadose Zone Soil	STKSPPVFRQGTSFTNQLQYQMNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWKWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0137399_101852442	3300012203	Vadose Zone Soil	MKINTKLLAFASGVALTALLHLGGLWANNKRWESEMINHGWGYWKWNIYDKMDWDGNQPLKFHWNNQPQTTRRTNWLEI*
Ga0137374_106350512	3300012204	Vadose Zone Soil	MKINTAVFAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNN
Ga0137376_103987682	3300012208	Vadose Zone Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWKWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEFEF*
Ga0137376_110152082	3300012208	Vadose Zone Soil	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNGTNWLEI*
Ga0137376_113738522	3300012208	Vadose Zone Soil	MNINSKLLAFATGVALTGLLHFGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDRNQPLEFHWNDHPKPTKPTNGVEI*
Ga0137378_101234614	3300012210	Vadose Zone Soil	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQ
Ga0137378_110015592	3300012210	Vadose Zone Soil	MKINTTVLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0137377_104125072	3300012211	Vadose Zone Soil	MKINTTVLAFASGVALTALLHVGGLWANDKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNKRTNWLEI*
Ga0137377_109448031	3300012211	Vadose Zone Soil	MNINSKLLAFATGVALTGLLHFGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDRNQPLEFHWNDHPKPTKRTKSLEI*
Ga0137387_112321402	3300012349	Vadose Zone Soil	MNINSKLLAFATGVALTALLHAGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI*
Ga0137372_100624601	3300012350	Vadose Zone Soil	QLQYHMNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNKRTNWLEI*
Ga0137372_101205713	3300012350	Vadose Zone Soil	MKINTAVFAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI*
Ga0137372_108489701	3300012350	Vadose Zone Soil	MKINTTVLACATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0137366_108095672	3300012354	Vadose Zone Soil	MKINTAVFAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQ
Ga0137368_104802391	3300012358	Vadose Zone Soil	AFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI*
Ga0137361_106560282	3300012362	Vadose Zone Soil	MNINTKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI*
Ga0137361_110856331	3300012362	Vadose Zone Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGQPKPTKSTSRIEI*
Ga0137397_107135011	3300012685	Vadose Zone Soil	NIKMKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNGTNWLEI*
Ga0137396_109083052	3300012918	Vadose Zone Soil	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDRNQPLEFHWNDQPQTNNRTNWLEI*
Ga0137394_107574892	3300012922	Vadose Zone Soil	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLKFHWNNQPQTTRRTNWLE
Ga0137394_110695801	3300012922	Vadose Zone Soil	MNINSKLLAFATGVTLTALLHLGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLKFHWNNQPQTTRRTNWLE
Ga0137359_102613842	3300012923	Vadose Zone Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKSTKSTSRIEI*
Ga0137359_107300131	3300012923	Vadose Zone Soil	MNVNSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHW
Ga0137419_103009052	3300012925	Vadose Zone Soil	MKINTKLLAFASGVALTALLHLGGLWANNKRWESEMINHGWGYWKWNIYDKTDWDGNQPLKFHWNNQPQTTRRTNWLEI*
Ga0137416_113223851	3300012927	Vadose Zone Soil	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI*
Ga0137404_111060791	3300012929	Vadose Zone Soil	ALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPRTNNGTNWLEI*
Ga0137404_112540981	3300012929	Vadose Zone Soil	MNMNSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLKFYWNRQPKPTKQ
Ga0137407_100068273	3300012930	Vadose Zone Soil	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPRTNNGTNWLEI*
Ga0157378_101064784	3300013297	Miscanthus Rhizosphere	MNTKLLAFATGVALTALVHLGGLWANNKWWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFQWNDPPKPAKAKKSLEI*
Ga0157379_103882312	3300014968	Switchgrass Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFQWNDPPKPAKAKKSLEI*
Ga0184610_11523391	3300017997	Groundwater Sediment	MKINTTVLAFASGVALTALLHPGGLWANNKRWESEMVNHGWGYWEWNIYDKMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0184610_11926882	3300017997	Groundwater Sediment	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNKRTNWLEI
Ga0184604_101201802	3300018000	Groundwater Sediment	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNGTNWLEI
Ga0184605_101455422	3300018027	Groundwater Sediment	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0184605_103971612	3300018027	Groundwater Sediment	MKINTTVLAFASGVALTALVHVGGLWANNKRWESEMVNHGWGYWKWHIYDKMDWDGNQPLEFHWNDQPRTNNRTNWLEI
Ga0184608_102867132	3300018028	Groundwater Sediment	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0184621_102780592	3300018054	Groundwater Sediment	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0184619_101863372	3300018061	Groundwater Sediment	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDRNQPLEFHWNDQPQTNNRTNWLEI
Ga0184617_11832802	3300018066	Groundwater Sediment	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDRDGNQPLEFHWNDQPQTNKRTNWLEI
Ga0184618_100656292	3300018071	Groundwater Sediment	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWHIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0184618_102737011	3300018071	Groundwater Sediment	MNIDGKLLVFATGVALTALLHLGGLWANNERWESEMVNHGWGYWKWNMYDKMDWDGNQPLEFHWNDQPKPTTERIASRFEF
Ga0184609_101291942	3300018076	Groundwater Sediment	MKINTTVLAFASGVALTALLHPGGLWANNKRWESEMINHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0184609_104131511	3300018076	Groundwater Sediment	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLKFHWNNQPKTTRRTNWLEI
Ga0184625_102035062	3300018081	Groundwater Sediment	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNVYDKMDWDGNQPLEFHWNDQPQTNERTDWLEI
Ga0066667_120863911	3300018433	Grasslands Soil	LTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0190269_104209921	3300018465	Soil	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNGTNCLEI
Ga0193756_10409492	3300019866	Soil	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDRNQPLEFHWNDQPQTNNRTNWLE
Ga0193723_11209252	3300019879	Soil	MKINTKLLAFVSGVALTALLHVGGLWANNKRWESDMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNKRTDWLEI
Ga0193707_10284132	3300019881	Soil	MKINTKLLAFASGVALTALLHLGGLWANNKRWESEMINHGWGYWKWNIYDKMDWDGNQPLKFHWNNQPQTTRRTNWLEI
Ga0193707_11747922	3300019881	Soil	MKINTTVLAFASGVALTALVHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0193727_10112083	3300019886	Soil	MKISTKLLAFASGVALTALLHVGGLWANNKRWESDMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTDWLEI
Ga0193727_10236203	3300019886	Soil	MKINTKLLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPKPTTERIASRFEF
Ga0193727_10640962	3300019886	Soil	MNINSKLLAFATGVALTALLHLGGLWANDKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0193729_11446012	3300019887	Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0193728_10416332	3300019890	Soil	MKINTTVLAFASGVALTALVHVGGLWANNKRWESEMVNHGWGYWKWHIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0193728_12900482	3300019890	Soil	MNINSKLLAFATGVALTALLHLGGMWANNKRWESEMVNHGWGYWEWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0193739_10616862	3300020003	Soil	MKINTKLLAFASGVALTALLHVGGLWANNKRWESDMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNKRTDWLEI
Ga0193755_12059482	3300020004	Soil	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLKFHWNNQPQTTRRTNWLEI
Ga0193735_10912952	3300020006	Soil	MKINTKLLAFASGVALTALLHLGGLWANNKRWESEMINHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0193721_10756112	3300020018	Soil	MKINTKLLAFASGVALTALVHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNGTNWLEI
Ga0193733_10250892	3300020022	Soil	MKINTTVLAFASGVALTTLLHVGGLWANNKRWESEMVNHGWGYWKWHIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0210381_101894041	3300021078	Groundwater Sediment	MKINTTVLAFASGVALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRT
Ga0210382_101582971	3300021080	Groundwater Sediment	MNIDGKLLVFATGVALTALLHLGGLWANNKRWESEIVNHGWGYWEWNIYDKMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0193719_100043376	3300021344	Soil	MKINTTVLAFASGVALTALVHIGGLWANNKRWESEMVNHGWGYWKWHIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0193719_103218442	3300021344	Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEIVNHGWGYWEWNIYDKMDWDGNQPLEFHWNGHPKPTKSTTRIEI
Ga0224452_10598991	3300022534	Groundwater Sediment	VALTALLHVGGLWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0222622_101038362	3300022756	Groundwater Sediment	MKINTNLLAFATGVALTALLHVGGVWANNKRWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNKRTDWIEI
Ga0207673_10695631	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKWWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDPP
Ga0207697_100043114	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFQWNDPPKPAKAKKSLEI
Ga0207688_102004631	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	NCDINVNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDPPKPAAKAKKSLEI
Ga0207681_100042793	3300025923	Switchgrass Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKWWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFQWNDPPKPAKAKKSLEI
Ga0207681_100813873	3300025923	Switchgrass Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDPPKPAKAKKSLEI
Ga0207706_101417664	3300025933	Corn Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKWWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFQWNDPPKPAK
Ga0207712_116330831	3300025961	Switchgrass Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNVYDKMDWDGNQPLEFQWNDPPKPAKAKKSLEI
Ga0207658_100198601	3300025986	Switchgrass Rhizosphere	TKLLAFATGVALTALVHLGGLWANNKWWEAEMVNHGWGYWKWNIYDKMDWDGNQPLEFQWNDPPKPAKAKKSLEI
Ga0209055_10588411	3300026309	Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDTMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0209805_12984891	3300026542	Soil	AFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWEWNIYDTMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0179587_103583682	3300026557	Vadose Zone Soil	MNINSKLFAFATGVALTALLHLGGLWANNKRWESEMVNHGWGYWKWNIYDNMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0268264_106352412	3300028381	Switchgrass Rhizosphere	VNINTKLLAFATGVALTALVHLGGLWANNKRWEAEMVNHGWGYWKWNVYDKMDWDGNQPLEFHWNDPPKPAKAKKSLEI
Ga0307290_103353021	3300028791	Soil	MKINTKLLAFVSGVALTALLHVGGLWANNKRWESEIVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI
Ga0307308_101684662	3300028884	Soil	MNINSKLLAFATGVALTALLHLGGLWANNKRWESEIVNHGWGYWEWNIYDKMDWDGNQPLEFHWNGHPKPTKSTSRIEI
Ga0073999_109914532	3300030839	Soil	MKINTTVLAFASGVALTALLHLGGLWANNKWWESEMVNHGWGYWKWNIYDKMDWDGNQPLEFHWNDQPQTNNRTNWLEI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085470

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences