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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F085461 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 111 |
| Average Sequence Length | 59 residues |
| Representative Sequence | MSRTEAAVAGSTRRKTKALVVPLAGLTAALFLPPLLAGLPLAGQRALIVTVITILLWTG |
| Number of Associated Samples | 98 |
| Number of Associated Scaffolds | 111 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 94 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.49 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.216 % of family members) |
| Environment Ontology (ENVO) | Unclassified (19.820 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (44.144 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 60.92% β-sheet: 0.00% Coil/Unstructured: 39.08% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.49 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 111 Family Scaffolds |
|---|---|---|
| PF08241 | Methyltransf_11 | 32.43 |
| PF13649 | Methyltransf_25 | 25.23 |
| PF02627 | CMD | 9.01 |
| PF06778 | Chlor_dismutase | 9.01 |
| PF00939 | Na_sulph_symp | 4.50 |
| PF08238 | Sel1 | 4.50 |
| PF13489 | Methyltransf_23 | 3.60 |
| PF08242 | Methyltransf_12 | 1.80 |
| PF12697 | Abhydrolase_6 | 0.90 |
| PF06463 | Mob_synth_C | 0.90 |
| COG ID | Name | Functional Category | % Frequency in 111 Family Scaffolds |
|---|---|---|---|
| COG0599 | Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family | General function prediction only [R] | 9.01 |
| COG2128 | Alkylhydroperoxidase family enzyme, contains CxxC motif | Inorganic ion transport and metabolism [P] | 9.01 |
| COG3253 | Coproheme decarboxylase/chlorite dismutase | Coenzyme transport and metabolism [H] | 9.01 |
| COG0471 | Di- and tricarboxylate antiporter | Carbohydrate transport and metabolism [G] | 4.50 |
| COG1055 | Na+/H+ antiporter NhaD or related arsenite permease | Inorganic ion transport and metabolism [P] | 4.50 |
| COG2896 | GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA) | Coenzyme transport and metabolism [H] | 0.90 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 16.22% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 12.61% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 10.81% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 10.81% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 7.21% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 5.41% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 4.50% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.60% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 2.70% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.70% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.70% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.70% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 2.70% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.70% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.80% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 1.80% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 1.80% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.90% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.90% |
| Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.90% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.90% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.90% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.90% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.90% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.90% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000559 | Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly | Environmental | Open in IMG/M |
| 3300001661 | Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly) | Environmental | Open in IMG/M |
| 3300002908 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm | Environmental | Open in IMG/M |
| 3300004281 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio | Environmental | Open in IMG/M |
| 3300005167 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 | Environmental | Open in IMG/M |
| 3300005177 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 | Environmental | Open in IMG/M |
| 3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005446 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 | Environmental | Open in IMG/M |
| 3300005451 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 | Environmental | Open in IMG/M |
| 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
| 3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
| 3300005553 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 | Environmental | Open in IMG/M |
| 3300005559 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 | Environmental | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300006794 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 | Environmental | Open in IMG/M |
| 3300006800 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 | Environmental | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
| 3300009806 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60 | Environmental | Open in IMG/M |
| 3300009808 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 | Environmental | Open in IMG/M |
| 3300009814 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 | Environmental | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300010863 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction) | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
| 3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
| 3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015358 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
| 3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
| 3300017656 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015 | Environmental | Open in IMG/M |
| 3300017997 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex | Environmental | Open in IMG/M |
| 3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
| 3300018074 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2 | Environmental | Open in IMG/M |
| 3300018075 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1 | Environmental | Open in IMG/M |
| 3300018078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex | Environmental | Open in IMG/M |
| 3300018079 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1 | Environmental | Open in IMG/M |
| 3300019259 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020170 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300021073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo | Environmental | Open in IMG/M |
| 3300021081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo | Environmental | Open in IMG/M |
| 3300026296 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026327 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes) | Environmental | Open in IMG/M |
| 3300026331 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes) | Environmental | Open in IMG/M |
| 3300026332 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes) | Environmental | Open in IMG/M |
| 3300026536 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes) | Environmental | Open in IMG/M |
| 3300026540 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes) | Environmental | Open in IMG/M |
| 3300026542 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes) | Environmental | Open in IMG/M |
| 3300026552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes) | Environmental | Open in IMG/M |
| 3300027032 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes) | Environmental | Open in IMG/M |
| 3300027384 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes) | Environmental | Open in IMG/M |
| 3300027655 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300028792 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S | Environmental | Open in IMG/M |
| 3300031150 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4 | Environmental | Open in IMG/M |
| 3300031198 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S | Environmental | Open in IMG/M |
| 3300031564 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031747 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22 | Environmental | Open in IMG/M |
| 3300031777 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24 | Environmental | Open in IMG/M |
| 3300031779 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22 | Environmental | Open in IMG/M |
| 3300031819 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21 | Environmental | Open in IMG/M |
| 3300031846 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19 | Environmental | Open in IMG/M |
| 3300031847 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4 | Environmental | Open in IMG/M |
| 3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
| 3300032060 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18 | Environmental | Open in IMG/M |
| 3300032090 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22 | Environmental | Open in IMG/M |
| 3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300033811 | Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| ICChiseqgaiiFebDRAFT_112202631 | 3300000363 | Soil | MSRTEAAVVAGTTRRTSKALVVPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLWTGEVLAPGVAALLSVTLL |
| F14TC_1010945731 | 3300000559 | Soil | MSRIEAAVRGGIRRRTLALAVPLIGLSAGLFLPPLLAGLPLAGQRALI |
| JGI12053J15887_103626061 | 3300001661 | Forest Soil | MSRTEAVVAGGTRRKTKALVIPLAGLGAALFLPPLLAGLPLAGQRALIITSITILLWTGEILAPGVAALLSVTLLAL |
| JGI25382J43887_104505772 | 3300002908 | Grasslands Soil | MSPTEAAVAAGTRRKTKALVVPLAGLGAALFLPPLLAGLP |
| Ga0066397_100361221 | 3300004281 | Tropical Forest Soil | MSRTEAALAGGTRRKTVALAVPIAGLAASLFLPPVLGSLPIAGQRALIVTLITILLWTGEILEPGVAALVGVTLLALS |
| Ga0066672_101069994 | 3300005167 | Soil | MSPTEAAVAAGTRRKTKALVVPLAGLGAALFLPPLLAGLPVAGQRALIVTLITILLWTGEILAPGVAALLSVSLLALSG |
| Ga0066690_101448851 | 3300005177 | Soil | MSPTEAAVAAGTRRKTKALVVPLAGLGAALFLPPLLAGLPVAGQRALIVTLITILLWTGEILAPGVAAL |
| Ga0066676_102708131 | 3300005186 | Soil | MSRTETAAAGATRRKTKALVVPLAGLVAALFLPPLAAGLPLAGQRALIVT |
| Ga0070668_1011825901 | 3300005347 | Switchgrass Rhizosphere | MSRTEAALAGGTRRKTVALAVPIAGLAASLFLPPVLGSLPIAGQRALIVTLITILLW |
| Ga0070708_1001431704 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MSPTEAAVAAGTRRKTKALVVPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLWTGEILAPGVAALLSVSLLALSG |
| Ga0070708_1019520112 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRTEAAVAGGTRRKTLALAVPLAGLAVGLFTILLWTGELLEPGVAALVGVTLLALSGATRSLRDALQGFVNPVPSS* |
| Ga0066686_104506052 | 3300005446 | Soil | MSRTEAVVAGGTRRKTKALVVPLAGLGAALFLPPLLAGLPLAGQRALIVTLITIL |
| Ga0066681_102743242 | 3300005451 | Soil | MRRTETAEAREAKRRALAVPLAALVAALFLPPVFTGLSLAGQRALIVTVITIVLWTGEILEPGVA |
| Ga0070704_1009178562 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRTEAALAGGTRRKTVALAVPIAGLAASLFLPPVLGSLPIAGQRALIVTLITILLWTGEILEPGVAALVGVTLLALSGATASL |
| Ga0066701_101689551 | 3300005552 | Soil | MSRTEAAVAGGTRRKTLALAVPLAGLAVGLFLPPVLAGLPLAGQRALIVTLITILLWTGELLE |
| Ga0066695_101256774 | 3300005553 | Soil | MSRTEAAVAGGTRRKTLALAVPLAGLAASLFLPPVLGGLPIAGQRALIVTLITILLWTGEILEPGVAALVGVTLLALSG |
| Ga0066700_108889642 | 3300005559 | Soil | MSRTEAAVAGSTRRKTKALVVPLAGLTAALFLPPLLAGLPLAGQRAL |
| Ga0066905_1002948751 | 3300005713 | Tropical Forest Soil | VAGGTRRKTVALAVPIAGLAASLFLPPVLAGLPIAGQRALIVTLITILLWTGEILEPGVAALVGVTLLALSRAT |
| Ga0068860_1017488491 | 3300005843 | Switchgrass Rhizosphere | MSRTDTAVVGAARRKTKALAVPLAGLGAALFLPPLLPGLPLAGQRALIVTLITILLWTGEILAPGV |
| Ga0066658_107053812 | 3300006794 | Soil | MSRTEAAVAGSTRRKTKALVVPLAGLTAALFLPPLLAGLPLAGQRALIVTVITILLWTG |
| Ga0066660_101971181 | 3300006800 | Soil | MSPTEAAVAAGTRRKTKALVVPLAGLGAALFLPPLLAGLPVAGQRALIVTLITILLWTGEILAPGVAALL |
| Ga0075428_1018706271 | 3300006844 | Populus Rhizosphere | MSRTDAAMAAGARRKTKALVVPLAGLTAALFLPPLLAGLPLAGQRALIVTLITIL |
| Ga0075421_1005345424 | 3300006845 | Populus Rhizosphere | MSRTEAAVVGGARRTSKTLVVPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLW |
| Ga0075433_100087151 | 3300006852 | Populus Rhizosphere | MSRTEAALAGGTRRKTVALAVPIAGLAASLFLPPVLGSLPI |
| Ga0075425_1008695202 | 3300006854 | Populus Rhizosphere | MSRTEAAMAGGAGRRTKALAVPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLWTGELLAPGVTALLSVTLL |
| Ga0075425_1009068473 | 3300006854 | Populus Rhizosphere | MSRTETAVAGATSRRTKALAVPLAGLGAALFLPPLLAGLPLAGQRALIVTLIT |
| Ga0075434_10001280210 | 3300006871 | Populus Rhizosphere | MSRTDTAVVGTARCKTKALVIPLAGLGAALFLPPLLPGLPLAGQRALIVTLITILLWT |
| Ga0075426_113418262 | 3300006903 | Populus Rhizosphere | MSPTEAAVAAGARRKTKALVVPLAGLGAALFLPPLL |
| Ga0075424_1021841861 | 3300006904 | Populus Rhizosphere | MSRTEAAVVGSARRTSKALVVPLAGLGGALFLPALLAGLPLAGQRALIVTLIT |
| Ga0075435_1001770151 | 3300007076 | Populus Rhizosphere | MSRTDTAVVGTARRKTKSLVIPLAGLGAALFLPPL |
| Ga0075435_1006498782 | 3300007076 | Populus Rhizosphere | MSRTETAVAGATSRRTKALAVPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLWTG |
| Ga0099791_100026658 | 3300007255 | Vadose Zone Soil | MSRTEAAVAGGTRRRALALAVPLAGLTAGLFLPPVLAGLPLAGQRALIVTLITILL* |
| Ga0066710_1042967732 | 3300009012 | Grasslands Soil | MRRTETAEAREAKRRALAVPLAALVAALFLPPVFTGLSLAGQRALIVTVITIVLWTGEILEPGVAALIGVTLL |
| Ga0075423_124525001 | 3300009162 | Populus Rhizosphere | MSPTEAAVAAGARRKTKALVVPLAGLGAALFLPPLLAGLPLAGQRALIVTLIT |
| Ga0105081_10330502 | 3300009806 | Groundwater Sand | MSRTEAAVAGGTRWRTLALLVPLAGLTAALFLPPMLAGLPLAGQRALVV |
| Ga0105071_10119361 | 3300009808 | Groundwater Sand | MSRIEAAAVAGGTRRRTLVLLVPLAGLAIALFLPPMLAGLPLAGQRALIVTLITILLWTG |
| Ga0105082_10309221 | 3300009814 | Groundwater Sand | MSRTEAAVAGGTRWRTLALLVPLAGLTAALFLPPMLAGLPLAGQRAL |
| Ga0126380_120739882 | 3300010043 | Tropical Forest Soil | MSRTEAAVAGATGRKTKALLIPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLWTGAILAPGVAALLS |
| Ga0126384_106902322 | 3300010046 | Tropical Forest Soil | MSRTQAVAGETRRRTKALLIPLAGLVLALFLPPMLAGLPLAGQRALIVTLITIVLWTGEILEPGSPRS* |
| Ga0126384_112774652 | 3300010046 | Tropical Forest Soil | MSRTEAAVAGVAGATGRKTKVLLLPLAGLAAALFLPPLLAGLPLAGQRALIVTLITILLWTG |
| Ga0126384_122375211 | 3300010046 | Tropical Forest Soil | MSRTEAAVAGDTRRKTKALLVPVAGLAVALFLPPLLAGLPLAGQRALIVTLITIVLWTGEVLAPGVTALLSVTLLA |
| Ga0126376_115295431 | 3300010359 | Tropical Forest Soil | MSRTQAVAGETRRRTKALLIPLAGLVLALFLPPMLAGLP |
| Ga0126377_103474604 | 3300010362 | Tropical Forest Soil | MSRTEAAVAGATGRKTKALLIPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLWTGEILAPGA |
| Ga0126377_110920791 | 3300010362 | Tropical Forest Soil | MSRTEAAVAGGTRRKTIALAVPIAGLAASLFLPPVLAGLPIAGQRALIVTLITI |
| Ga0126377_117334391 | 3300010362 | Tropical Forest Soil | MSRTEAAVAGATGRKTKALLVPLAGLAVALFLPPLLAGLPLAGQRALIVTLITILLWTGEILAPGVAAL |
| Ga0126377_135237181 | 3300010362 | Tropical Forest Soil | MSRTEAAVAGGTRRKTVALAVPIAGLAASLFLPPVLAGLPIAGQRA |
| Ga0134125_117594732 | 3300010371 | Terrestrial Soil | MSRTEAAVVAGTARRTSKALVVPLAGLGAALFLPAL |
| Ga0134124_111119083 | 3300010397 | Terrestrial Soil | MSRTEAAVAGGTGRRTKALAVPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLWTGELLAPGVTALL |
| Ga0126383_105920851 | 3300010398 | Tropical Forest Soil | MSRAEAAVAGETRRRTKALVIPLAGLAVALFLPPLLAGLPLAGQRAL |
| Ga0126383_109511182 | 3300010398 | Tropical Forest Soil | MSRTQAVAGETRRRTKALLIPLAGLVLALFLPPMLAGLPRAGQRALIVTLITIVLWTGEILEPGSPRS* |
| Ga0126383_122621862 | 3300010398 | Tropical Forest Soil | MSRTEAAMIPGTGRKMKALAIPLAGLTVALFMPPLLAGLPLAGQRALLVTLI |
| Ga0124850_10466221 | 3300010863 | Tropical Forest Soil | MSRTEAAVAGATGRKTKALLVPLAGLAAALLLPPLLAGLPLAGQRALIVTLITILLWTGEILAPGVAALLSVTLLALSG |
| Ga0137399_102355584 | 3300012203 | Vadose Zone Soil | MTRAMSRTEAVVAGGTRRKTKALVIPLAGLGAALFLPSLLAGLPLAGQRALIV |
| Ga0137376_107258602 | 3300012208 | Vadose Zone Soil | MSRTEAVVAAGTRRKTKALVVPLAGLGVALFLPPLLAGLPLAGQ |
| Ga0137358_107748792 | 3300012582 | Vadose Zone Soil | MSRTDTAVVGAARRKTKALAVPLAGLGAALYFQDW |
| Ga0137397_111477352 | 3300012685 | Vadose Zone Soil | MSRTETAVAREAKRRALAVPLAALVVALFLPPMFTGLSLAGQRALIVT |
| Ga0137419_116356491 | 3300012925 | Vadose Zone Soil | MSRTEAAVAGGTRRKTRALAVPLAGLAAALFLPPLLAGLPLAGQ |
| Ga0137416_112793932 | 3300012927 | Vadose Zone Soil | MSRTETAVAREAKRRALAVPLAALVAALFLPPVFTDLSLAGQRALIVTVITIVLWTGELIEPGVAALIGVTLLALSGATRS |
| Ga0137410_104195212 | 3300012944 | Vadose Zone Soil | MSRTVAAVGVGTRRRTLALAVPLAGLTAGLFLPPVLVGLPLAGQRALIVTLITILLWTGELLEPG |
| Ga0137410_114272752 | 3300012944 | Vadose Zone Soil | MTRTDTAVAREAKRRALAVPLALLVAALFLPPLFAGLSLAGQRQAREQRG |
| Ga0126375_105988171 | 3300012948 | Tropical Forest Soil | MIRTEAALAGGTRRKTVALAVPIAGLAASLFLPPVLGSLPIAGQRALIVTLITILLWTGEILEPGVAALVGVTLLALSGATASLRD |
| Ga0126369_101728934 | 3300012971 | Tropical Forest Soil | MSRTEAAGAGGTRRKTVALAVPIAGLAASLFLPPVLAGLPIAGQRALIVTLITILLWTGEIL |
| Ga0164309_111870831 | 3300012984 | Soil | MSRTDTAVVGVARRKTKALAVPLAGLGAALFLPPLLSGLPLAGQRALIVT |
| Ga0157372_129082412 | 3300013307 | Corn Rhizosphere | MSRTEAALAGGTRRKTVALAVPIAGLAASLFLPPVLGSLPIAGQRALIVTLITILLWTGEILEPGVAALVGV |
| Ga0134089_100293842 | 3300015358 | Grasslands Soil | MGRTVAAVGVGTRRRTLALAVPLAGLTAGLFLPPVLVGLPLAGQRALIVTLITILLWTGELLEPGVAASSV* |
| Ga0132256_1006362971 | 3300015372 | Arabidopsis Rhizosphere | MSRTEAAVAGATGRRTKALVVPLAGLGAALFLPPLLAGLPLAGQRA |
| Ga0182041_108003581 | 3300016294 | Soil | MSRTEAAVIPSTGRKTKALAVPLAGLTVALFMPPLLAGLPLAGQRALVVTLITIVLWTGEILAPGVTALLSVTLLAVSG |
| Ga0182041_119758502 | 3300016294 | Soil | MSRTQAVAGETRRRTKALLIPLAGLVLALFLPPLLAGLPLAGQRAL |
| Ga0182033_106357932 | 3300016319 | Soil | MSRTQAVAGETRRRTKALLIPLAGLVLALFLPPLLAGLPLAG |
| Ga0134112_102870831 | 3300017656 | Grasslands Soil | MSRTEAAVAGGTRRKTLALAVPLAGLAASLFLPPVLAGLPIAGQRALIVTLITILLWTGEILEPGVAALVGVTLLALSGATGSLRDA |
| Ga0184610_13187242 | 3300017997 | Groundwater Sediment | MSRTVAAVGVGTRRRTAGLFLPPVLVGLPLAGQRALIVTLITILLWTGELLEPGV |
| Ga0184638_10731141 | 3300018052 | Groundwater Sediment | MSRTVAAVGVGTRRRTLALAVPLAGLTAGLFLPPVLVGLPLAGQRALIVT |
| Ga0184640_101040761 | 3300018074 | Groundwater Sediment | MSRTVAAVGVGTRRRTAGLFLPPVLVGLPLAGQRALIVTLITILLWTGELLEPGVAALVGVTLLALSGATRSLRD |
| Ga0184632_100657061 | 3300018075 | Groundwater Sediment | MSRTVAAVGVGTRRRTLALAVPLAGLTAGLFLPPVL |
| Ga0184612_101420611 | 3300018078 | Groundwater Sediment | MSRTVAAVGVGTRRRTLALAVPLAGLTAGLFLPPVLVGLPLAGQRALIVTL |
| Ga0184627_101232103 | 3300018079 | Groundwater Sediment | MSRTVAAVGVGTRRRTPALAVPLAGLTAGLFLPPVLVGLPLA |
| Ga0184646_13170523 | 3300019259 | Groundwater Sediment | MSRTVAAVGVGTRRRTAGLFLPPVLVGLPLAGQRALIVTLITILLDGRAPRAGRR |
| Ga0179594_101562812 | 3300020170 | Vadose Zone Soil | MSRTEAAVAGGTRRKTRALAVPLAGLAAALFLPPLLAGLPLAGQRALIVTSITILLWTGEILAPGVAALLSVTLLALS |
| Ga0210378_100649311 | 3300021073 | Groundwater Sediment | MSRTVAAVGVGTRRRTLALAVPLAGLTAGLFLPPVLGGLPLAGQ |
| Ga0210379_103503861 | 3300021081 | Groundwater Sediment | MSRTVAAVGVGTRRRTLALAVPLAGLTAGLFLPPVLVGLPLAGQRALIVTLIT |
| Ga0209235_12167061 | 3300026296 | Grasslands Soil | MSRTEAVVAPGTRRKTKALVVPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLWTGEILAPGVAALLSVTLLALS |
| Ga0209266_12719652 | 3300026327 | Soil | MSRTEAAVAGGTRRKTLALAVPLAGLAASLFLPPVLGGLPIAGQRALIVTLITILL |
| Ga0209267_10405921 | 3300026331 | Soil | MSRTEAVVAPGTRRKTKALVVPLAGLGAALFLPPLL |
| Ga0209803_10695884 | 3300026332 | Soil | MSPTEAAVAAGTRRKTKALVVPLAGLGAALFLPPLLAGLPLAGQRALIVTLITILLWTGEILAPGVAALLSVSL |
| Ga0209058_10856134 | 3300026536 | Soil | MSRTEAAVAGSTRRKTKALVVPLAGLTAALFLPPLLAGLPLAGQRALIVTVITILLWTGELLAPGVAALL |
| Ga0209376_12922501 | 3300026540 | Soil | MSRTEAAVAGGTRRKTLALAVPLAGLAASLFLPPVLAGLPIAGQRALIVTLITIL |
| Ga0209805_12880622 | 3300026542 | Soil | MSPTEAAVAAGTRRKTKALVVPLAGLTAALFLPPLLAGLPLAGQRALIVTVITI |
| Ga0209577_100575031 | 3300026552 | Soil | MSPTEAAVAAGTRRKTKALVVPLAGLGAALFLPPLLAGLPVAGQRALIVTLIT |
| Ga0209877_10200492 | 3300027032 | Groundwater Sand | MSRTEAAVAGGTRWRTLALLVPLAGLTAALFLPPMLAGLPLAG |
| Ga0209854_10990551 | 3300027384 | Groundwater Sand | MSRPEAAVASGTRRMTLALAVPLVGLAAGLFLPPLLAGLPLAGQRALIVTLITILLWTG |
| Ga0209388_10126302 | 3300027655 | Vadose Zone Soil | MSRTEAAVAGGTRRRALALAVPLAGLTAGLFLPPVLAGLPLAGQRALIVTLITILL |
| Ga0209382_108445652 | 3300027909 | Populus Rhizosphere | MSRTEAALAGGTRRKTVALAVPIAGLAASLFLPPVLGSLP |
| Ga0137415_111299551 | 3300028536 | Vadose Zone Soil | MSRTETAVAREAKRRALAVPLAALVAALFLPPVFTDLSLAGQRALIVTVITIVLWTGEI |
| Ga0307504_101756062 | 3300028792 | Soil | MSRTETAVAREAKRRALAVPLAALVVALFLPPMFTGLSLAGQRALIVTVITIVLWTGEILEPGVAA |
| (restricted) Ga0255311_10695032 | 3300031150 | Sandy Soil | MSRTEAAVAGGTRRKTKALAVPLAGLAAALFLPPLLAGLPLAGQRALIVTLITILLWTGEILAPGVAALLSVTLLAFSGVTGSLRDA |
| Ga0307500_100186974 | 3300031198 | Soil | MSRTDTAVVGAARRKTKALAVPLAGLGAALFLPPLLPGLPLAGQRALIVTLITILLWTGEML |
| Ga0318573_101774571 | 3300031564 | Soil | MSRTEAAVIPSTGRKTKALAVPLAGLTVALFMPPLLAGLPLAGQRALVVTLITI |
| Ga0307469_103564221 | 3300031720 | Hardwood Forest Soil | MSRTETAAAGATRRKTKALVVPLAGLVAALFLPPLAAGLPL |
| Ga0318502_106636662 | 3300031747 | Soil | MSRTEAAVIPSTGRKTKALAVPLAGLTVALFMPPLLAGLPLAGQRALVVTLITIVLWTGEILAP |
| Ga0318543_103454891 | 3300031777 | Soil | MSRTEAAVIPSTGRKTKALAVPLAGLTVALFMPPLLAGLPLAGQRALVVTLITIVLWAGEIL |
| Ga0318566_105607022 | 3300031779 | Soil | MSRTQAVAGETRRRTKALLIPLAGLVLALFLPPLLAGLPLAGQRALIVTLITIILWTGEMLAPGVTALLSVTLLALSG |
| Ga0318568_109161631 | 3300031819 | Soil | MSRTEAAVIPSTGRKTKALAVPLAGLTVALFMPPLLAGLPLAGQRALVVTLITIVLWTGEIL |
| Ga0318512_105099391 | 3300031846 | Soil | MSRTQAVAGETRRRTKALLIPLAGLVLALFVPPLLAGLPLAGQRALIVTL |
| Ga0310907_104144921 | 3300031847 | Soil | MSRTEAAVVAGTARRTSKALVVPLAGLGAALFLPPLLSGLP |
| Ga0310885_106973432 | 3300031943 | Soil | MSRTEAAVVAGTARRTSKALVVPLAGLGAALFLPPLLSGLPLAGQRALIVTLITILLWTGEVLAPGVA |
| Ga0318505_104809812 | 3300032060 | Soil | MSRTEAAVIPSTGRKTKALAVPLAGLTVALFMPPLLAGLPLAGQRALVVTLITIVLWTGEILAPGVTALLSVT |
| Ga0318518_104417522 | 3300032090 | Soil | MSRTEAAVIPSTGRKTKALAVPLAGLTVALFMPPLLAGLPLAGQRALVVTLITIVLWTGE |
| Ga0307470_113268942 | 3300032174 | Hardwood Forest Soil | MSRTEAAVAGGTRRKTLALAVPLAALAVSLFLPPMLAGLPLAGQRALIVT |
| Ga0307472_1024562241 | 3300032205 | Hardwood Forest Soil | MSRTEAAVARTTRRKTEALAVALAGLAAALFLPPLLAGLPLA |
| Ga0307472_1027566052 | 3300032205 | Hardwood Forest Soil | MSVTDTAVVGAARRKTKALAVPLAGLGAALFLPPLLPGLPL |
| Ga0364924_090703_500_685 | 3300033811 | Sediment | MSRTEAAVAGGTRRRALALAVPLAGLTAGLFLPPVLAGLPLAGQRALIVTLITILLWTGELL |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |