Metagenome Family F085453

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085453
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	76 residues
Representative Sequence	MQTNEIKSWEELYVAAVLETDPAKIADRLDTAQDALRERWHALRQLPLARAPEKQRVEDAIRTLNMIRLNELDAPA
Number of Associated Samples	85
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.29 %
% of genes near scaffold ends (potentially truncated)	16.22 %
% of genes from short scaffolds (< 2000 bps)	73.87 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.694 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.423 % of family members)
Environment Ontology (ENVO)	Unclassified (39.640 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.568 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.54% β-sheet: 0.00% Coil/Unstructured: 38.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13354	Beta-lactamase2	13.51
PF00215	OMPdecase	10.81
PF03544	TonB_C	8.11
PF01965	DJ-1_PfpI	2.70
PF03352	Adenine_glyco	1.80
PF13185	GAF_2	0.90
PF13365	Trypsin_2	0.90
PF04402	SIMPL	0.90
PF00171	Aldedh	0.90
PF00881	Nitroreductase	0.90
PF02082	Rrf2	0.90
PF06723	MreB_Mbl	0.90
PF13751	DDE_Tnp_1_6	0.90
PF00324	AA_permease	0.90
PF10067	DUF2306	0.90
PF01850	PIN	0.90
PF03992	ABM	0.90
PF00012	HSP70	0.90
PF00271	Helicase_C	0.90
PF04773	FecR	0.90
PF01556	DnaJ_C	0.90
PF11563	Protoglobin	0.90
PF00156	Pribosyltran	0.90
PF02470	MlaD	0.90
PF11066	DUF2867	0.90
PF01434	Peptidase_M41	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	8.11
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	1.80
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.90
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.90
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.90
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.90
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.90
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.90
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.90
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.90
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.90
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.90
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.90
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.90
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.90
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.90
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.90
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.90
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.90
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.90
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.90
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.69 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.69 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.69 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.07 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	49.55 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.22 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.55 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.32 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.55 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.32 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.55 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.21 %
Unclassified	root	N/A	6.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.55 %
Unclassified	root	N/A	6.31 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120073331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300004081\|Ga0063454_101359532	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005167\|Ga0066672_10660490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300005171\|Ga0066677_10268862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300005171\|Ga0066677_10370437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300005174\|Ga0066680_10675525	Not Available	637	Open in IMG/M
3300005175\|Ga0066673_10041173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2282	Open in IMG/M
3300005176\|Ga0066679_10717291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300005179\|Ga0066684_10192781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1314	Open in IMG/M
3300005180\|Ga0066685_10150157	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300005181\|Ga0066678_10223523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300005186\|Ga0066676_10289150	All Organisms → cellular organisms → Bacteria → Acidobacteria	1081	Open in IMG/M
3300005187\|Ga0066675_10763578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300005332\|Ga0066388_100059585	All Organisms → cellular organisms → Bacteria	4028	Open in IMG/M
3300005332\|Ga0066388_100108044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3269	Open in IMG/M
3300005332\|Ga0066388_100392786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2033	Open in IMG/M
3300005332\|Ga0066388_100467132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1902	Open in IMG/M
3300005434\|Ga0070709_10162375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1554	Open in IMG/M
3300005434\|Ga0070709_10636055	Not Available	825	Open in IMG/M
3300005435\|Ga0070714_100023587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5057	Open in IMG/M
3300005435\|Ga0070714_101814312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300005436\|Ga0070713_100077691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2823	Open in IMG/M
3300005437\|Ga0070710_10959497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005446\|Ga0066686_10101184	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1856	Open in IMG/M
3300005450\|Ga0066682_10156926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1450	Open in IMG/M
3300005451\|Ga0066681_10221787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300005538\|Ga0070731_10782311	Not Available	633	Open in IMG/M
3300005554\|Ga0066661_10476649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300005555\|Ga0066692_10757413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300005557\|Ga0066704_10168897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1472	Open in IMG/M
3300005575\|Ga0066702_10396115	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005587\|Ga0066654_10038833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2037	Open in IMG/M
3300005764\|Ga0066903_100182898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3095	Open in IMG/M
3300006028\|Ga0070717_11422088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300006032\|Ga0066696_10038775	All Organisms → cellular organisms → Bacteria	2606	Open in IMG/M
3300006046\|Ga0066652_101476442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300006796\|Ga0066665_10085346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2279	Open in IMG/M
3300006796\|Ga0066665_10149839	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300006797\|Ga0066659_10554979	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300006800\|Ga0066660_10629914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300006800\|Ga0066660_10873213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300006804\|Ga0079221_11101335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300006893\|Ga0073928_10000678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	75237	Open in IMG/M
3300006893\|Ga0073928_10005137	All Organisms → cellular organisms → Bacteria	18605	Open in IMG/M
3300007076\|Ga0075435_101151616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300007982\|Ga0102924_1001848	All Organisms → cellular organisms → Bacteria → Acidobacteria	23777	Open in IMG/M
3300009012\|Ga0066710_103698173	Not Available	575	Open in IMG/M
3300009012\|Ga0066710_103906237	Not Available	558	Open in IMG/M
3300009012\|Ga0066710_103913512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300009137\|Ga0066709_101866145	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300009137\|Ga0066709_102610881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300009792\|Ga0126374_10438665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300010048\|Ga0126373_10016622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6121	Open in IMG/M
3300010048\|Ga0126373_10058658	All Organisms → cellular organisms → Bacteria → Acidobacteria	3445	Open in IMG/M
3300010048\|Ga0126373_10629476	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300010335\|Ga0134063_10629657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300010337\|Ga0134062_10471275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300010376\|Ga0126381_100148662	All Organisms → cellular organisms → Bacteria	3072	Open in IMG/M
3300010376\|Ga0126381_100296716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2211	Open in IMG/M
3300010376\|Ga0126381_100479101	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300010376\|Ga0126381_100930344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300010376\|Ga0126381_100957102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300010376\|Ga0126381_101549937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300012198\|Ga0137364_10402010	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300012199\|Ga0137383_10900194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300012201\|Ga0137365_10744102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300012202\|Ga0137363_11514894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012208\|Ga0137376_10154630	All Organisms → cellular organisms → Bacteria	1974	Open in IMG/M
3300012208\|Ga0137376_10521762	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300012209\|Ga0137379_10084465	All Organisms → cellular organisms → Bacteria	3054	Open in IMG/M
3300012212\|Ga0150985_106018701	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300012285\|Ga0137370_10908447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300012350\|Ga0137372_10442135	Not Available	977	Open in IMG/M
3300012353\|Ga0137367_10847453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300012356\|Ga0137371_10605509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300012357\|Ga0137384_10153214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1929	Open in IMG/M
3300012357\|Ga0137384_11442749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300012361\|Ga0137360_10288620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1359	Open in IMG/M
3300012469\|Ga0150984_117977172	Not Available	1106	Open in IMG/M
3300012582\|Ga0137358_10125279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1747	Open in IMG/M
3300012683\|Ga0137398_10747085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012923\|Ga0137359_10000586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	27278	Open in IMG/M
3300012927\|Ga0137416_11990982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300014052\|Ga0120109_1157816	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300014150\|Ga0134081_10139158	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300015356\|Ga0134073_10163879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300016445\|Ga0182038_11701808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300018431\|Ga0066655_10337329	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300018433\|Ga0066667_10238759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1368	Open in IMG/M
3300018433\|Ga0066667_10733963	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300018468\|Ga0066662_11731130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300018482\|Ga0066669_10013993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4226	Open in IMG/M
3300018482\|Ga0066669_10040453	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300018482\|Ga0066669_10123102	All Organisms → cellular organisms → Bacteria → Acidobacteria	1852	Open in IMG/M
3300019888\|Ga0193751_1007343	All Organisms → cellular organisms → Bacteria	6007	Open in IMG/M
3300020579\|Ga0210407_10031362	All Organisms → cellular organisms → Bacteria → Acidobacteria	3953	Open in IMG/M
3300020580\|Ga0210403_10567305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300021046\|Ga0215015_10839601	All Organisms → cellular organisms → Bacteria → Acidobacteria	2766	Open in IMG/M
3300021560\|Ga0126371_10021829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5915	Open in IMG/M
3300021560\|Ga0126371_10774786	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300022557\|Ga0212123_10000488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	129382	Open in IMG/M
3300022557\|Ga0212123_10011764	All Organisms → cellular organisms → Bacteria	11921	Open in IMG/M
3300026316\|Ga0209155_1016265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3174	Open in IMG/M
3300026528\|Ga0209378_1224738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300026530\|Ga0209807_1045514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2048	Open in IMG/M
3300026550\|Ga0209474_10156129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1482	Open in IMG/M
3300027629\|Ga0209422_1145244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300028784\|Ga0307282_10623274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300031718\|Ga0307474_10388190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1085	Open in IMG/M
3300031962\|Ga0307479_11778155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300032261\|Ga0306920_101505386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.30%
Host-Associated	Host-Associated	2.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.79%
Aquatic	Environmental → Aquatic	4.50%
Plants	Host-Associated → Plants	2.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.68%
Loam	Environmental → Terrestrial → Soil → Loam	17.12%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.41%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.41%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.41%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1200733312	3300002568	Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELRELPLARDPEKQRVEDAIRTLNMIRLTELERLA*
Ga0063454_1013595322	3300004081	Soil	LMQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELRELPLARDPEKQRVEDAIRTLNMIRLTELERLA*
Ga0066672_106604901	3300005167	Soil	MQTNEIKSWEELYIAAVLETDPAKIANRLDTAQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLNELDPPA*
Ga0066677_102688621	3300005171	Soil	MQTNEIKSWEELYIAAVLETDPAKIANRLDTAQDALRERWHALRQLPLAREPEKQRVEDAIRTLNVIRLNELDPPA*
Ga0066677_103704371	3300005171	Soil	MEVREFMPWEELYVAAVLETDPTKAAERINVAQDALRERWQALGKVPLARNPEKRRVEDAIQTLNLIKQNELGPPG*
Ga0066680_106755251	3300005174	Soil	MQTNEMQTNEIKSWEELYIAAVLETDPAKIANRLDTAQDALRERWHALRQLPLAREPEKQRVEDAIRTLNVIRLNELDPPA*
Ga0066673_100411732	3300005175	Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMICVSELERPA*
Ga0066679_107172911	3300005176	Soil	MQTTEFKPWEELYVAAVLENDPAKAADRINTAQDALRERWHTLSRAPLARNRERQRVEDAIRTLNMMRLNELDPPA*
Ga0066684_101927812	3300005179	Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKERVEDAIRTLNMIRVSELERPA*
Ga0066685_101501572	3300005180	Soil	MQTNEMQTNEIRSWEELYVAAVLETDPAKIADRLDAAQDALRERWHALRQLPLAREPEKQRVEDATRTLNVIRLNELDPPA*
Ga0066678_102235232	3300005181	Soil	MQTNEMQTNEIKSWEELYIAAVLETDPAKIADRLDTAQDALRERWHALRHLPLARDPEKQRVEDAIRTLNMIRLNELDAPA*
Ga0066676_102891501	3300005186	Soil	RSWEELYVAAVLETDPAKIADRLDAAQDALRERWHALRQLPLAREPEKQRVEDATRTLNVIRLNELDPPA*
Ga0066675_107635781	3300005187	Soil	MQTDEIKSWEELYVAAVLETDPAKIADRLDTAQDALRERWHALRHLPLARDPEKQRVEDAIRTLNMIRLNELDSPA*
Ga0066388_1000595852	3300005332	Tropical Forest Soil	METNEPQLWEELYTAAVLETDPSKVADRIDQAQDALRARLHTLRQLPLARDRERRRLEDAIRTLNMIRATELRSPL*
Ga0066388_1001080443	3300005332	Tropical Forest Soil	METSEHKVWEELYVAAVLESDPTKMADKISLAQDALRERWHELRQVPLARHRERQRVEDAIRTLNLLRLTELEHPA*
Ga0066388_1003927862	3300005332	Tropical Forest Soil	MEANRFGVWEDLYVAAVLETDPGKISEKISLAQDALRERWHELRQVPLARNREKQRVEDAIRTLNLLRLNELERPA*
Ga0066388_1004671322	3300005332	Tropical Forest Soil	MEKNEPQLWEELYTAAVLETDPGKVADRIDQAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATELQSPL*
Ga0070709_101623752	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MQTNHAGVWEDLYAAAVLETDPSKIADKISTAQDALRQRWHELREVPLARDREKQRVEDAIRTLNMIRVTELERPA*
Ga0070709_106360552	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MEANEITPWEDLYVAAVLETDPAKAAARIDIAQDALRERWHALGQTPLARDPERKRVEDAIRTLNLIRLNEIEPPA*
Ga0070714_1000235874	3300005435	Agricultural Soil	MEIREFMPWEELYVAAVLESDPTKAAERINVAQDALRERWQALGQVPLARNPEKRRVEDAIQTLNLIKQNELGPPG*
Ga0070714_1018143122	3300005435	Agricultural Soil	MEANEITPWEDLYVAAVLETDPAKAAARIDIAQDALRERWHALGQAPLARDRERKRVEDAIRTLNLIRLNEIEPPA*
Ga0070713_1000776912	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQTNDAGVWEDLYAAAVLETDPSKIADKISTAQDALRQRWHELREVPLARDREKQRVEDAIRTLNMIRVTELERPA*
Ga0070710_109594971	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MQANEITPWEDLYVAAVLETDPAKAAARIDIAQDALRERSHALGQAPLARDPERKRVEDAIRTLNLIRLNEIEPPA*
Ga0066686_101011842	3300005446	Soil	MQTNHAAVWEDLYVAAVLETDPNKIVEKISLAQDALRERWHELRQVPLARDREKQRVEDAIRTLNLLRLNELEHPA*
Ga0066682_101569262	3300005450	Soil	MQTNHAGVWEDLYVAAVLETDPNKIVEKISLAQDALRERWHELRQVPLARDREKQRVEDAIRTLNLLRLNELEHPA*
Ga0066681_102217872	3300005451	Soil	MQTDEIKSWEELYVAAVLETDPARIADRLDTAQDALRERWHALRHLPLARDPEKQRVEDAIRTLNMIRLNELDSPA*
Ga0070731_107823112	3300005538	Surface Soil	METREFMPWEEMYVAAVLEVDPKKAAERINVAQDALRKRQQALDRGVPLARNPERIRVADAIQTLNLIKRNELGSPG*
Ga0066661_104766492	3300005554	Soil	MQTNEIKSWEELYVAAVLETDPARIADRLDTAQDALRERWHALRHLPLARDPEKQRVEDAIRTLNMIRLNELDPPA
Ga0066692_107574132	3300005555	Soil	MQKNELQFWEELYVAAVLETDPARVAVRIDQAQDALRERWQILCKAPRARDRERQRVEDAMRTLNLIRDTELRTSA*
Ga0066704_101688972	3300005557	Soil	MQKNELQFWEELYVAAVLETDPAKVAARIDQAQNALRERWRILCQAPRARDRERQRVEDAMRTLNLIRDTELRTSA*
Ga0066702_103961151	3300005575	Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDRERERVEDAIRTLNMIRVSELERPA*
Ga0066654_100388332	3300005587	Soil	MQTNHAGVWEDLYVAAVLETDPSKIGDKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVTELERPA*
Ga0066903_1001828984	3300005764	Tropical Forest Soil	METNEPQLWEELYTAAVLETDPGKVADRIDQAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATELQSPL*
Ga0070717_114220881	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MEANEITPWEDLYVAAVLETDPAKAAARIDIAQDALRERWHALGQAPLARDSERKRVEDAIRTLNLIRLNEIEPPA*
Ga0066696_100387752	3300006032	Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVSELERPS*
Ga0066652_1014764422	3300006046	Soil	MQTNHAGVWEDLYVAAVLETDPNKIVEKISLAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVTELERPA*
Ga0066665_100853463	3300006796	Soil	MQTNEIKSWEELYVAAVLETDPARIADRLDTAQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLNELDAPA*
Ga0066665_101498393	3300006796	Soil	MQKNELQFWEELYVAAVLETDPAKVAARIDQAQDALRERWQILCQAPRARDRERQRVEDAMRTLNLIRDTELRISA*
Ga0066659_105549792	3300006797	Soil	MQTNYAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKERVEDAIRTLNMIRVSELERPA*
Ga0066660_106299141	3300006800	Soil	QTDEIKSWEELYVAAVLETDPAKIADRLDTAHDALRERWHALRHLPLARDPEKQRVEDAIRTLNVIRLNELDPPA*
Ga0066660_108732131	3300006800	Soil	MQTNHAGVWEDLYVAAVLETDPSKIGDKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVSELERPA*
Ga0079221_111013352	3300006804	Agricultural Soil	MESKEPQAWEELYAAAVLEPDPGKVADRIDKAQDALRERWQILRQMPLQRDRERRRVEDAIRTLNMIRATELEAPV*
Ga0073928_1000067836	3300006893	Iron-Sulfur Acid Spring	METHQFKPWEELYVAAVLENDPAKAAGRIDIAQDALRERWHSLSKVPLARNRERQRVEDAIRTLNMIRLNELEPPS*
Ga0073928_100051378	3300006893	Iron-Sulfur Acid Spring	METSEPQPWEDLYTAAVLETDPSKVTDRITVAQDALRERWQTLHHMPLARDHERRRVEDAIRTLNMIRATELEAPP*
Ga0075435_1011516161	3300007076	Populus Rhizosphere	METNEINSWEELYVAAVLETDPAKMEDRINLAQDALRERWYTLRQVPIARHPERQRVEDAIRTLNMIRLNELEPPA*
Ga0102924_10018488	3300007982	Iron-Sulfur Acid Spring	MQTSEFRPWEQLYVAAVLEDDPAKAADRINTAQDALRERWHALSRAPLARNRERQRVEDAIRTLNMIRLDELDPPA*
Ga0066710_1036981731	3300009012	Grasslands Soil	RHEQNRFRECNFEVGRCLMENNEPQAWEELYAAAVLEPDTGKVADRIDKAQDALRERWQILRQTPLHRDRERRRVEDAIRTLNMIRATELEAPA
Ga0066710_1039062371	3300009012	Grasslands Soil	MQTNEMQTNEIKSWEELYIAAVLETDPAKIANRLDTAQDALRERWHALRQLPLAREPEKQRVEDAIRTLNVIRLNE
Ga0066710_1039135121	3300009012	Grasslands Soil	MQTNEMQTNEIRTWEELYVAAVLETDPAKIADRLDAAQDALRERWHALRQLPLAREPEKQRVEDAIRTLNVIRLNE
Ga0066709_1018661452	3300009137	Grasslands Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVSELERPA*
Ga0066709_1026108811	3300009137	Grasslands Soil	METREFMRWEELYVAAVLEPDPTKIAERIDVAQDALRERWQALGQGPLARNPEKMRVEDAIQTLSLIKRNELGPPG*
Ga0126374_104386652	3300009792	Tropical Forest Soil	MGTNEPQLWEELYTAAVLETDPSKVADRIDQAQDALRARLHTLRQLPLARDRERRRLEDAIRTLNMIRATELRSPL*
Ga0126373_100166224	3300010048	Tropical Forest Soil	METNEPHLWEELYTAAVLETDPGKVADRIDKAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATELKAQL*
Ga0126373_100586584	3300010048	Tropical Forest Soil	METDEPQLWEELYTAAVLETDPSKVADRIDQAQDALRERLHSLRQLPLARDRERRRLEDAIRTLNLIRATELQSPL*
Ga0126373_106294762	3300010048	Tropical Forest Soil	MEMNEPQLWEELYTAAVLETDPSKVADRIDQAQAALRERLHARRELPLAQDRERRRLEDAIRTLNMIRATELQAPL*
Ga0134063_106296571	3300010335	Grasslands Soil	MQTNEIKSWEELYVAAVLETDPAKIADRLDAAQDARRERWHALRQLHLARDPEKQRVEDAIRTLNMIRLNELDPPA*
Ga0134062_104712751	3300010337	Grasslands Soil	MQTNEVKSWEELYVAAVLETDPVKIADRLDIAQDALRERWHALRQVPLARDPEKQRVEDAIRTLNMIRLNELDPPA*
Ga0126381_1001486624	3300010376	Tropical Forest Soil	MGTNEPQLWEELYTAAVLETDPSKVADRIDQAQDALRARLHTLRQLPLARDRERQRLEDAIRTLNMIRATELRSPL*
Ga0126381_1002967163	3300010376	Tropical Forest Soil	METNEPQLWEELYTAAVLETDPGKVAHRIDQAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATEL
Ga0126381_1004791012	3300010376	Tropical Forest Soil	METNEPQLWEELYTAAVLETDPGKVADRIDKAQDALRERLHTLRQHPLARDRERRRLEDAIRTLNMIRATELQSPL*
Ga0126381_1009303442	3300010376	Tropical Forest Soil	METNEPQLWEELYTAAVLETDPNKVADRIDKAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATELQSPL*
Ga0126381_1009571021	3300010376	Tropical Forest Soil	METNEPQLWEELYTAAVLETDPSKVADRIDQAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATELQSPL*
Ga0126381_1015499371	3300010376	Tropical Forest Soil	METNEPQLWEELYTAAVLETDPSKVADRMNQAQAALRERLHALCQLPLAQDRERRRLEDAIRTLNMIRATELEAPL*
Ga0137364_104020102	3300012198	Vadose Zone Soil	MQANHAGVWEDLYVSAVLETDPNKIVEKISLAQDALRERWHELRQVPLARDREKQRVEDAIRTLNLLRLNELEHPA*
Ga0137383_109001941	3300012199	Vadose Zone Soil	MQTNEIKSWEELYVAAVLETDPAKIADRLDTAQDALRERWHALRQLPLARAPEKQRVEDAIRTLNMIRLNELDAPA*
Ga0137365_107441022	3300012201	Vadose Zone Soil	METNEAWEELYVAAVLETDATKIVDRINLAQDALRDRWHSLSQTPHARDRERQRVEDAIRTLNLIRQTELKASA*
Ga0137363_115148941	3300012202	Vadose Zone Soil	TNEVKSWEELYVAAVLETDPARIADRLDTAQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLNELDPPA*
Ga0137376_101546301	3300012208	Vadose Zone Soil	METNEIKSWEELYAAAVLESDPVKAVDRINTAQDALRERWHALRQVPLARDPERRRVEDAIRTLNLIRLNELEPPA*
Ga0137376_105217622	3300012208	Vadose Zone Soil	MQTNHAGVWEELYVAAVLETDPNKIVEKISLAQDALRERWHELRQVPLARDREKQRVEDAIRTLNLLRLNELEHPA*
Ga0137379_100844653	3300012209	Vadose Zone Soil	MQINEIKSWQELYVAAVLETDPAKIADRLDTAQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLNELDAPA*
Ga0150985_1060187012	3300012212	Avena Fatua Rhizosphere	MQTNHAGVWEDLYVAAVLETDPSKIADKISTAQNALRERWHELREVPLARDREKQRVEDAIRTLNMIRVTELERPA*
Ga0137370_109084471	3300012285	Vadose Zone Soil	MQTNEIKSWEELYVAAVLETNPAKIADRLDSAQDALRERWHALRHLPLARDPEKQRVEDAIRTLNMIRLNELDPPA*
Ga0137372_104421353	3300012350	Vadose Zone Soil	METNEAWEELYVAAVLETDATKIVDRINLAQDALRDRWHSLSQTPHARDRERQRVEDAIRTLNLI
Ga0137367_108474532	3300012353	Vadose Zone Soil	MQTDEIKSWEELYVAAVLETDPAKIADRLDTAQDALRERWHALRQVPLARDPEKQRVEDAIRTLNMI
Ga0137371_106055091	3300012356	Vadose Zone Soil	MQTDEIKSWEELYVAAVLETDPARIADRLDTAQDALRERWHALRLLPLARDTEKQRVEDAIRTLNMIRLNELDPPA*
Ga0137384_101532143	3300012357	Vadose Zone Soil	MQINEIKSWEELYVAAVLETDPAKIADRLDTAQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLNELDAPA*
Ga0137384_114427491	3300012357	Vadose Zone Soil	MQTDEIKSWEELYVAAVLETDPAKIADRLDTAQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLN
Ga0137360_102886201	3300012361	Vadose Zone Soil	MQTNEIKSWEELYVAAVLETDPARIADRLDTSQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLNELDPPA*
Ga0150984_1179771722	3300012469	Avena Fatua Rhizosphere	MELREFMPWEELYVAAVLETDPTKAAERINVAQDALRERWQALGQVPLARNPEKRRVEDAIQTLNLIKQNELGPPG*
Ga0137358_101252791	3300012582	Vadose Zone Soil	METNEIKSWEELYAAAVLESDPAKAVDRINTAQDALRERWHALRQVPLARDPERRRVEDAIRTLNLIRLNE
Ga0137398_107470851	3300012683	Vadose Zone Soil	NEIKSWEELYVAAVLETDPARIADRLDTAQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLNELDPPA*
Ga0137359_1000058625	3300012923	Vadose Zone Soil	MELNESKAWEELYVAAVLENDPAKAADRINTAQDALRERWHALSQTPLARDPERQRVEDAIRTLNLIRLNET*
Ga0137416_119909821	3300012927	Vadose Zone Soil	VRFLNRKVLLETNESKPWEELYVAAVLENDPAKAVDRINTAQDALRERWHALSQVSLARDPERQRVEDAIRTLTLIRLNELEPPA*
Ga0120109_11578162	3300014052	Permafrost	VVARVLKPLLYVAAVLETDPEKAADRINTAQDALRERWQALRQTPLARDPERQRVEDAIRTLNMIRANELDPPA
Ga0134081_101391582	3300014150	Grasslands Soil	MQTNYAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVTELERPA*
Ga0134073_101638792	3300015356	Grasslands Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVTELERPA*
Ga0182038_117018082	3300016445	Soil	YSMETNEPRLWEKLYTAAVLETDPGKVADRIDKAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATELNAQL
Ga0066655_103373292	3300018431	Grasslands Soil	MQTNHAAVWEDLYVAAVLETDPNKIVEKISLAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVTELERPA
Ga0066667_102387592	3300018433	Grasslands Soil	MQTNEMQTNEIKSWEELYIAAVLETDPAKIANRLDTAQDALRERWHALRQLPLAREPEKQRVEDAIRTLNVIRLNELDPPA
Ga0066667_107339631	3300018433	Grasslands Soil	MQTNHAGVWEDLYVAAVLETDPNKIVEKISLAQDALRERWHELRQVPLARDREKQRVEDAIRTLNLLRLNELEHPA
Ga0066662_117311301	3300018468	Grasslands Soil	MQTNEIKSWEELYVAAVLETDPARIADRLDTAQDALRERWHALRKLPLARDPEKQRVEDAIRTLNMIRLNELDPPA
Ga0066669_100139935	3300018482	Grasslands Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMICVSELERPA
Ga0066669_100404531	3300018482	Grasslands Soil	MQTNHGGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVTELERPM
Ga0066669_101231022	3300018482	Grasslands Soil	MQTNEIKSWEELYVAAVLETDPARIADRLDTAQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLNELDSPA
Ga0193751_10073435	3300019888	Soil	METSEPQPWEDLYTAAVLETDPSKVTDRITVAQDALRERWQTLHHMPLARDHERRRVEDAIRTLNMIRATELEAPP
Ga0210407_100313625	3300020579	Soil	MQTTEFKPWEELYVAAVLENDPNKAADRINTAQDALRERWHALSQVPLARNRERQRVEDAIRTLNLIRLNELDPHA
Ga0210403_105673051	3300020580	Soil	MQTTEFKPWEELYVAAVLENDPTKAADRINTAQDALRERWHALSQVPLARNRERQRVEDAIRTLNLIRLNELDPHA
Ga0215015_108396013	3300021046	Soil	METSEPEPWEGLYAAAVLETDPSKVADRITVAQNALRERWQTLHHMPLARDHERRRVEDAIRTLNMIRATELEAPP
Ga0126371_100218295	3300021560	Tropical Forest Soil	METNEPQLWEELYTAAVLETDPGKVADRIDQAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATELQSPL
Ga0126371_107747862	3300021560	Tropical Forest Soil	METNEPHLWEELYTAAVLETDPGKVADRIDKAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATELKAQL
Ga0212123_1000048857	3300022557	Iron-Sulfur Acid Spring	METHQFKPWEELYVAAVLENDPAKAAGRIDIAQDALRERWHSLSKVPLARNRERQRVEDAIRTLNMIRLNELEPPS
Ga0212123_100117648	3300022557	Iron-Sulfur Acid Spring	MQTSEFRPWEQLYVAAVLEDDPAKAADRINTAQDALRERWHALSRAPLARNRERQRVEDAIRTLNMIRLDELDPPA
Ga0209155_10162653	3300026316	Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVSELERPS
Ga0209378_12247381	3300026528	Soil	MQTNEIKSWEELYVAAVLETDPARIADRLDTAQDALRERWHALRQLPLARDPEKQRVEDAIRTLNMIRLNELDAPA
Ga0209807_10455143	3300026530	Soil	MQTNHAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKERVEDAIRTLNMIRVSELERPA
Ga0209474_101561292	3300026550	Soil	MQTNYAGVWEDLYVAAVLETDPNKIADKISTAQDALRERWHELREVPLARDREKQRVEDAIRTLNMIRVSELERPS
Ga0209422_11452441	3300027629	Forest Soil	MQTSEFKPWEELYVAAVLESDPAKAADRIDTAQDALRERWHALSQVPLARNREMQRVEDAIRTLNMIRLNELDPPA
Ga0307282_106232741	3300028784	Soil	MQTNEIHMNETKAWEELYVAAVLETDPAKIADRLDVAQDALRERWHALREVALARDPEKQRVEDAIRTLNMIRLNELDLPA
Ga0307474_103881902	3300031718	Hardwood Forest Soil	MQTSEFKPWEELYVAAVLEDDPAKAADRINTAQDALRERWHALSRAPLARNRERQRVEDAIRTLNMMRLNELDPPA
Ga0307479_117781551	3300031962	Hardwood Forest Soil	QTTEFKPWEELYVAAVLENDPAKAVDRINTAQDALRERWHALSQVPLARDRERQRIEDAIRTLNLIRLNELDPRA
Ga0306920_1015053862	3300032261	Soil	METNEPRLWEKLYTAAVLETDPGKVADRIDKAQDALRERLHTLRQLPLARDRERRRLEDAIRTLNMIRATELNAQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085453

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences