NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F085422

Metagenome / Metatranscriptome Family F085422

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085422
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 121 residues
Representative Sequence MTHDRKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASWFLSKRAWLAKTLSLGAWILLGAFLIQVRGQRPDKPHQDDARILALADGREVTLTARVIREGYAQAAGP
Number of Associated Samples 99
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 90.09 %
% of genes near scaffold ends (potentially truncated) 97.30 %
% of genes from short scaffolds (< 2000 bps) 84.68 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (85.586 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog
(14.414 % of family members)
Environment Ontology (ENVO) Unclassified
(29.730 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(36.036 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 58.62%    β-sheet: 0.00%    Coil/Unstructured: 41.38%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF13567DUF4131 66.67
PF05958tRNA_U5-meth_tr 26.13
PF10543ORF6N 1.80
PF03309Pan_kinase 1.80
PF01797Y1_Tnp 0.90
PF03099BPL_LplA_LipB 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG2265tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD familyTranslation, ribosomal structure and biogenesis [J] 26.13
COG1521Pantothenate kinase type IIICoenzyme transport and metabolism [H] 1.80
COG0095Lipoate-protein ligase ACoenzyme transport and metabolism [H] 0.90
COG0321Lipoate-protein ligase BCoenzyme transport and metabolism [H] 0.90
COG0340Biotin-protein ligaseCoenzyme transport and metabolism [H] 0.90
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.90

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.59 %
UnclassifiedrootN/A14.41 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10011318All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7521Open in IMG/M
3300004092|Ga0062389_100151860All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2184Open in IMG/M
3300005471|Ga0070698_101703911All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter583Open in IMG/M
3300005536|Ga0070697_101089116All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300005561|Ga0066699_10985780All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae584Open in IMG/M
3300005586|Ga0066691_10128827All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1442Open in IMG/M
3300005598|Ga0066706_10324119All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1217Open in IMG/M
3300005610|Ga0070763_10074438All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1667Open in IMG/M
3300005712|Ga0070764_10899005All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300006059|Ga0075017_100086237All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2168Open in IMG/M
3300006059|Ga0075017_100316896All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1155Open in IMG/M
3300006059|Ga0075017_100996175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas cellasea652Open in IMG/M
3300006086|Ga0075019_10238647All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1083Open in IMG/M
3300006102|Ga0075015_100665466All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300006797|Ga0066659_10242762All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1344Open in IMG/M
3300007265|Ga0099794_10522903All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300009038|Ga0099829_10412558All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300009088|Ga0099830_11227390All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300009519|Ga0116108_1174861All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300009552|Ga0116138_1019838All Organisms → cellular organisms → Bacteria2094Open in IMG/M
3300009631|Ga0116115_1083156Not Available828Open in IMG/M
3300009635|Ga0116117_1134141All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300009636|Ga0116112_1227083Not Available516Open in IMG/M
3300009700|Ga0116217_10916843Not Available537Open in IMG/M
3300009764|Ga0116134_1241545All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300009839|Ga0116223_10373245Not Available842Open in IMG/M
3300010343|Ga0074044_10766604All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300010379|Ga0136449_104008413Not Available550Open in IMG/M
3300011269|Ga0137392_10104728All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2235Open in IMG/M
3300012096|Ga0137389_11013286All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300012189|Ga0137388_11162020All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300012203|Ga0137399_11281411Not Available616Open in IMG/M
3300012582|Ga0137358_10374313All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300012685|Ga0137397_11344097Not Available505Open in IMG/M
3300012923|Ga0137359_11497495All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300012925|Ga0137419_11147371All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300012925|Ga0137419_11861135Not Available516Open in IMG/M
3300014159|Ga0181530_10209816All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300015193|Ga0167668_1012691All Organisms → cellular organisms → Bacteria1899Open in IMG/M
3300017822|Ga0187802_10288036All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300017823|Ga0187818_10033436All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2208Open in IMG/M
3300017823|Ga0187818_10443994All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300017934|Ga0187803_10249035All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300017943|Ga0187819_10019137All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3965Open in IMG/M
3300017943|Ga0187819_10600779All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300017943|Ga0187819_10701633All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300017955|Ga0187817_11007526All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300017972|Ga0187781_10875497All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300017998|Ga0187870_1283025Not Available561Open in IMG/M
3300018004|Ga0187865_1218746Not Available644Open in IMG/M
3300018005|Ga0187878_1246535All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300018005|Ga0187878_1361914All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300018014|Ga0187860_1253999All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300018019|Ga0187874_10217295All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300018019|Ga0187874_10235573All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300018026|Ga0187857_10458234All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300018030|Ga0187869_10103746All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300018030|Ga0187869_10201377All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300018034|Ga0187863_10130074All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300018042|Ga0187871_10128427All Organisms → cellular organisms → Bacteria1443Open in IMG/M
3300018047|Ga0187859_10195728All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300019082|Ga0187852_1063282All Organisms → cellular organisms → Bacteria1690Open in IMG/M
3300019787|Ga0182031_1487785All Organisms → cellular organisms → Bacteria1936Open in IMG/M
3300021170|Ga0210400_10441399All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300021181|Ga0210388_10100018All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2482Open in IMG/M
3300021181|Ga0210388_11513241All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300021402|Ga0210385_10041054All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3051Open in IMG/M
3300021858|Ga0213852_1250129All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300021861|Ga0213853_10187012All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300025477|Ga0208192_1030831All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300025500|Ga0208686_1036806All Organisms → cellular organisms → Bacteria1192Open in IMG/M
3300025581|Ga0208355_1121759All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300025619|Ga0207926_1038139All Organisms → cellular organisms → Bacteria1400Open in IMG/M
3300026508|Ga0257161_1113074Not Available568Open in IMG/M
3300027497|Ga0208199_1128034Not Available518Open in IMG/M
3300027591|Ga0209733_1043243All Organisms → cellular organisms → Bacteria1201Open in IMG/M
3300027669|Ga0208981_1104237All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300027674|Ga0209118_1108491All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300027692|Ga0209530_1156427All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300027812|Ga0209656_10188433All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300027824|Ga0209040_10383486All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300027898|Ga0209067_10549728All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300027903|Ga0209488_10248192All Organisms → cellular organisms → Bacteria1335Open in IMG/M
3300027911|Ga0209698_11122423All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300028566|Ga0302147_10010408All Organisms → cellular organisms → Bacteria3539Open in IMG/M
3300028574|Ga0302153_10003671All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5886Open in IMG/M
3300028748|Ga0302156_10271809All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300028766|Ga0302269_1141347All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300028779|Ga0302266_10019236All Organisms → cellular organisms → Bacteria3621Open in IMG/M
3300028874|Ga0302155_10327641All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300029914|Ga0311359_11126398Not Available519Open in IMG/M
3300029939|Ga0311328_10254676All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300029952|Ga0311346_11357408Not Available541Open in IMG/M
3300029953|Ga0311343_10071848All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4145Open in IMG/M
3300029982|Ga0302277_1012983All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4912Open in IMG/M
3300029986|Ga0302188_10009898All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5667Open in IMG/M
3300029986|Ga0302188_10296892All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300029988|Ga0302190_10018436All Organisms → cellular organisms → Bacteria3840Open in IMG/M
3300029999|Ga0311339_11855713All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300030399|Ga0311353_10230946All Organisms → cellular organisms → Bacteria1724Open in IMG/M
3300030494|Ga0310037_10137984All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300030518|Ga0302275_10642829Not Available505Open in IMG/M
3300030688|Ga0311345_10065122All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4429Open in IMG/M
3300031250|Ga0265331_10436586Not Available588Open in IMG/M
3300031754|Ga0307475_10399760All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300031962|Ga0307479_11889892All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300032205|Ga0307472_100681571All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300032205|Ga0307472_101048617All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300032892|Ga0335081_12226936All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83576Open in IMG/M
3300033829|Ga0334854_016079All Organisms → cellular organisms → Bacteria1810Open in IMG/M
3300034090|Ga0326723_0350270All Organisms → cellular organisms → Bacteria667Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog14.41%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland12.61%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.71%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland7.21%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment7.21%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.31%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.50%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.60%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.60%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.70%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds1.80%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.80%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.80%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.90%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.90%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.90%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.90%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.90%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.90%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.90%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300009635Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10EnvironmentalOpen in IMG/M
3300009636Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018004Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100EnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300019082Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021858Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025477Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025581Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025619Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300027497Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028566Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2EnvironmentalOpen in IMG/M
3300028574Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2EnvironmentalOpen in IMG/M
3300028748Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2EnvironmentalOpen in IMG/M
3300028766Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2EnvironmentalOpen in IMG/M
3300028779Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2EnvironmentalOpen in IMG/M
3300028874Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1EnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029939I_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029952II_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029953II_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029982Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1EnvironmentalOpen in IMG/M
3300029986Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1EnvironmentalOpen in IMG/M
3300029988Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030518Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2EnvironmentalOpen in IMG/M
3300030688II_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300031250Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaGHost-AssociatedOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033829Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1001131813300001593Forest SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVAFVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQGDARILALADGREVTLTARVIREGYAQAAGPKSIRESID
Ga0062389_10015186013300004092Bog Forest SoilMTYHHSPPRQPLFWAALAFSVGIWIGARGWRPPSWWVIAVVAFVFAASWFLRTRAWLAGVLSLGAWFLLGAFLIQVRAQRSGDLRDNDARVLALADGRPVILTARVMREGYAQAAGSKSVRETIDVE
Ga0070698_10170391113300005471Corn, Switchgrass And Miscanthus RhizosphereMTHDRKPPRQPLFWTALAFSLGLWTGVRAWRPPSWWVIAAVAFVFAASWFLVRRAWLAKALSLGTWLLLGALLIQIRGQPPDELQQDDARIFALADGRAVTLTARLIREGYARAAGPQSIRESIDVETE
Ga0070697_10108911623300005536Corn, Switchgrass And Miscanthus RhizosphereMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVAFAFAAAWFLPKRAWLAKALSLGAWVLLGAFLIQVRGQQTVNHRQYDARILALADGREVTLTARVIREGYVQAVGPRSIRESIDV
Ga0066699_1098578013300005561SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVFAIVVLVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNDARVFALADGREVTLTARVVREGYAQAAGPGSIRESI
Ga0066691_1012882713300005586SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVFAIVVLVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNDARILSLADGREVTLTARVIREGYAQAAGPGSIRESIDVETEEIA
Ga0066706_1032411923300005598SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVFAIVVLVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNDARIFSLADGREVTLTARVIREGYAQAAGPGSIRESIDVETEEIA
Ga0070763_1007443823300005610SoilMKRDRRPPRQPLFWAALAFSLGLWTGVRVWRPPSWWVIAVVAFVLVTAFFLSKRAWLAKTLSLGAWVLLGAFLIQVRGQPQDKSQDAPGILTLADGRLVTLTARVMREGYA
Ga0070764_1089900523300005712SoilMVHNRKPPRQPLFWAAVVFSLGLWTGTRAWRPPSWWVVAVMAFVFAASWFLPRRAWLAKALSLGAWFLLGAFLIQVRSQPSAEPQQNGDQILALADGRSVVLTGHIIREGY
Ga0075017_10008623733300006059WatershedsMTNDRKPPRQPLFWAAVAFSLGLWTGVRAWRPPSWWVIAVVVFAVAASFFLSNRAWLAKTLSLGAWVLLGALLIQVRSQPLDTLRQDGARVLALSDGRAVTLTGRVMREGYARAAGPRSIRESIDVETEAIASDGEIW
Ga0075017_10031689623300006059WatershedsMTHAHKPPRQPLFWAALAFSAGLWIGVRAWRPPAWWVIASLAFVVAAWWFVSRRAWMAKSLSLGTWILLGAFLIQVRGGQADDPQILELADGREVTLIAHVIREGYARAAG
Ga0075017_10099617513300006059WatershedsMTHDRKPPRQPLFWASLAFSLGLWIGVRAWRPPSWWVIAVVAFVFGASFFLSKRAWLAKALSLGAWVLLGAFLIQVRGQPADNLPHDNARILGLADGRAVTLTARVIREGYARAAGPQSIRESIDVETEQ
Ga0075019_1023864713300006086WatershedsMARLKSCPSRCLVLINFSASHESNAMTHAPNPPCQPLFWAALAFSAGLWVGVRAWRPPSWWVIAVLAFVLAAAWFVSRRAWMAKTLSLGTWFLLAAFLIQLRAGPVADPQILALADGRELTLTAHVIREGYA
Ga0075015_10066546613300006102WatershedsMTHAHKPPRQPLFWAALAFSAGLWIGVRAWRPPAWWVIASLAFVVAAWWFVSRRAWMAKSLSLGTWILLGAFLIQVRGGQADDPQILELADGREVTLIAHVIREGYARAAGPRSVRESIDVETEEIESAGQS
Ga0066659_1024276223300006797SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVFAIVVLVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNDARVFALADGREVTLTARVVREGYAQAAGPGSI
Ga0099794_1052290313300007265Vadose Zone SoilMTHDRKPPRQPLFWAALAFSVGLWMGVRAWRPPSWWVIAVVAFVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNDARVFALADGREVTLTA
Ga0099829_1041255823300009038Vadose Zone SoilMTHDRKPPRQPLFWAALAFSLGLWMGVGAWRPPSWWVIAVVAFVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDNLQQNDARILALADGGEVTLTAGVIREGYAQAAGPRSIRESIDVETEEIASQGE
Ga0099830_1122739023300009088Vadose Zone SoilMTHDRKPPRQPLFWTALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASWFLVRRAWLAKGLSLGAWLLLGALLIQIRGQPPDELQQDDARIFALADGRAVTLTARVIREG
Ga0116108_117486123300009519PeatlandMRPPLDEARFLYRRSKPGDQAMTHDHKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASFFLAKRAWLAKALSLGAWFLLGAFLIQVRGQRPEELHRDGARIVALSDGRAVTLRARVMREGYA
Ga0116138_101983823300009552PeatlandMRPPLDEARFLYRRSKPGDQAMTHDHKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASFFLAKRAWLAKALSLGAWFLLGAFLIQICGQRQDELQSDAPRILTLADGRAVTLTARVMREGYARAAGPRSIRESIDVETEEIAS
Ga0116115_108315623300009631PeatlandMMLTHKPPRQPLFWAAVAFSLGLWTGVRAWRPPSWWVIAVVVFVFAASWFLSKRAWLGKALSLGAWFLLGAFLIQVRGQPPGELQHEGSRIFALADGRAVTLTARVMREGYARAASPQSIRESIDVETEAIAS
Ga0116117_113414113300009635PeatlandMKHDRKPPRQPLFWAAVAFSLGLWVGVRAWRPPLWWVIAVVVFVFAASWFLRKRAWLAKALSLGAWVLLGAFLIQVRGQRPDEPSQDGARLFALADGRPVVLTA
Ga0116112_122708313300009636PeatlandVKHDDQKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVLAASWFLPKRAWLAKALSLGAWVLLGAFLIQIRVQAPHELQQDEARILALADGRAVALTARVMREGY
Ga0116217_1091684313300009700Peatlands SoilMTHDRKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIALVAFVLAASWFLSKRAWLGKALSLGAWFLLGAFLIQVRGQRPEELQRDDARIVALSDGRAVRLTARVMREGYARAAGPKSISESID
Ga0116134_124154513300009764PeatlandMTRDQKSPRQPLFWAALAFSLGLWMGVRAWRPPLWWVIAVVAFVLASACFLPKRAWLAKALSLGTWVLLGAFLIQIRGQAPNELQRDGPRILALADGRAVTLTARVMREGYAR
Ga0116223_1037324513300009839Peatlands SoilMTRDQKPPRQPLFWGALAFSLGLWMGVRAWRPPSWWVIAVVAFVFAAAWFLPKRAWLAKALSLGAWILLGAFLIQIRGQPPHELQQDEARVLALADGRAVTLTARVMREGYARDAGPRSIRE
Ga0074044_1076660413300010343Bog Forest SoilMTNEEKPPRQPLFWAAVVFSVGLWTGARAWRPPSWWVFALVAFVFAASWFLPKRAWLAKVLSLGAWFILGALVIQSRGQEMNESHDAARIVGLADGRPVILTARVMREGYAREAGPKSVRESIDVETETIASGGETW
Ga0136449_10400841313300010379Peatlands SoilMTRDQKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVAFVFAAAWFLPKRAWLAKTLSLGAWVLLGAFLIQIRGQRPDALQQDEARVLALADGRAISLTARVMREGYARDAGPRSIRESIDVETEEIASEGE
Ga0137392_1010472813300011269Vadose Zone SoilMTHDRKPPRQPLFWTALAFSLGLWTGVRAWRPPSWWVIAVVVFVFAASWFLVRRAWLAKGLSLGAWLLLGALLIQIRGQPPDELQQDDARIFALADGRAVTLTARVIREGYARAAGPRSIRESIDVETEEI
Ga0137389_1101328623300012096Vadose Zone SoilMTHDRKPPRQPLFWTALAFSLGLWTGVRAWRPPSWWVIAVVVFVFAASWFLVRRAWLAKALSLGAWLLLGALLIQIRGQPPDELQQDDARIFALADGRAVTLTA
Ga0137388_1116202013300012189Vadose Zone SoilMTHDRKPPRQPLFWTALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASWFLVRRAWLAKALSLGAWLLLGALVNQIRGQPSDKLQKNDARIFALADGRAVTLTARVIREGYARAAGPQSIRESIDVETEEI
Ga0137399_1128141113300012203Vadose Zone SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVAFVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNDARVFALADGREVTLTARVVREGYAQAAGPGSIRESIDVETEEIARQGER
Ga0137358_1037431323300012582Vadose Zone SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRTWRPPSWWVFAIVVLVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNDARILSLADGREVT
Ga0137397_1134409713300012685Vadose Zone SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVTFVCAASWFLAKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNDARIFALADGREVTLTARVIREGYAQAAGPR
Ga0137359_1149749523300012923Vadose Zone SoilMNVRGRLELPPGPIPTPEIKAMTHDRKPSRQPLFWAALAFSLGLWTGVRAWRPPAWWVIAVMAFVFAASWFLARRAWLAKALSLGAWLLLGALLIQIRGQPSDELQQDDLQKELQKNDARILAMADGRAVTLTARVIREGYTSAAGPRSIREANAHD
Ga0137419_1114737113300012925Vadose Zone SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVTFVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNDARILGLADGREVTLTARVI
Ga0137419_1186113513300012925Vadose Zone SoilMMTHDRKPPRQPLFWAALAFSLGLWMGVRVWRPPSWWVFAVVALVFAASWFLSKRAWLAKALSLGVWILLGAFLIQVRGQRTDNLQQNDARILALADGREVTLTARVIREGY
Ga0181530_1020981623300014159BogMTRDQKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWMIAVAAFVLAAWWFLAKRAWLAKVLSLGAWVLLGAFLIQIRGQPPHELQRDDARILALADGSAVTLTARVMREGYARDAGPRSIRESIDL
Ga0167668_101269113300015193Glacier Forefield SoilMTHDRKPPRQPLFWAALAFSLGLWAGVRAWRPASWWVIAVVAFVFAASWFLPKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQNNARIFALADGRPVTLTARVIRERYARAAGTRSI
Ga0187802_1028803613300017822Freshwater SedimentMTNDRNPPRQPLFWAAVAFSLGLWTGVRAWRPPSWWMLALVAFVLAAFWFLPKRAWLGKTFSLGAWFLLGAFLIQVRGQPPAELQRDNAQIMALSDGFPVTLTAHVFREGYGRAS
Ga0187818_1003343633300017823Freshwater SedimentMMRDGGPARQPLLWGALAFSLGLWMGARAWRPPSWWVAAVVAFVLAALWFLTKRSWLAKGLSLGMWVLLGAFLIQVRCPEPSDPRLLALADGREVTLIAHVMREGYARSAGSRSTRESIDVE
Ga0187818_1044399423300017823Freshwater SedimentMTRDRNPPRQPLFWAALVFSVGLWTGVRAWRPPSWWMIAVVVFVFAASFFLSQRAWLAKTLSLGTWFLLGAFLIQIRGQRADDPRILALADGRAVAFTAYVIREGYARSAGPQSIREAIDVETEE
Ga0187803_1024903513300017934Freshwater SedimentMTRDHKPPRQPLLWGALAFSLGLWMGVRAWRPPSWWVAAVVAFVLAALWFLSRRTWLAKGLSLGTWVLLGAFLIQVRCPDPSDPRLLVLADGREVTLIAHVMREGYARSA
Ga0187819_1001913713300017943Freshwater SedimentMTRDRNPPRQPLFWAALVFSVGLWTGVRAWRPPSWWMIAVVVFVFAASFFLSQRAWLAKTLSLGTWFLLGAFLIQIRGQRADDPRILALADGRAVAFTAYVIREGYARSAGPQSIREAIDVETEEVASQGESS
Ga0187819_1060077913300017943Freshwater SedimentMTRDQKPPRQPLFWAALAFSCGLWMGVHAWRPLSWWVIAVVAFVLAASWFLPRRAWLAKALSLGAWILLGAFLIQIRGHRPDELQQDEARILAMADGRGVTLTARVMREGYAREAGPRSIRESID
Ga0187819_1070163323300017943Freshwater SedimentMTRDQKPPRQPLFWAALAFSLGLWIGVRAWRPPSWWVIAVVAFVLAASWFLPRRAWLAKGLSLGAWVLLGAFLIQIRGQPHELQQEEARILALADGRAVTLTARVMREGYARDAGPRSIREPIDVETEEIASQGRSW
Ga0187817_1100752613300017955Freshwater SedimentMTNDRNPPRQPLFWAAVAFSLGLWTGVRAWRPPSWWMLALVAFVLAAFWFLPKRAWLGKTFSLGAWFLLGAFLIQVRGQPPAELQRDNAQIMALSDGFPVTLTAH
Ga0187781_1087549713300017972Tropical PeatlandMALARRTNASGPHSSSHSFRLFFPPMTHERNPPPQPLFWAAVVFAIGLWTGARAWRPPVWWVIAAVAFVVAAVWFLGKRDWLAKALALGSWFLLGAILIQARALRPDLHDQARILALADGRPVTLTA
Ga0187870_128302513300017998PeatlandMTRNWNPPRQPLFWAAVSFSLGLWTGVRAWRPPSWWVIAVVAFVLASSWFLTKRAWLAKLLSLGAWLLLGAFLIQVRGQRPDDLRQNAPSILTLADGREVTLTARVMREGYARA
Ga0187865_121874613300018004PeatlandMTRDQKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVLAASWFLPKRAWLAKALSLGAWVFLGAFLIQIRGQAPNELQRDGPRILALADGRAVTL
Ga0187878_124653513300018005PeatlandMTHDHKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASFFLAKRAWLAKALSLGAWFLLGAFLIQICGQRQDELQSDAPRILTLADGRAVTLTARVMREGYARAAGPRSIRESIDVETEEIASQGESWPVRAG
Ga0187878_136191413300018005PeatlandMTHDRKPPRQPLFWAALVFSLGLWTGVRAWRPPSWWVIAVVAFVFATSWFLPRRARLAKALSLGTWFLLGAFLIQIRSQPQGDPRTLALADGRAVTLTGRVMREGYARAASP
Ga0187860_125399923300018014PeatlandMTHDHKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASFFLAKRAWLAKALSLGAWFLLGAFLIQICGQRQDELQSDAPRILTLADGRAVTLTARVMREGYARAAGPRSIRESIDVETEEIAS
Ga0187874_1021729513300018019PeatlandMTHDHKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASFFLAKRAWLAKALSLGAWFLLGAFLIQICGQRQDELQSDAPRILTLADGRAVTLTARVMREGYARAAGPRSIRESIDVETEEIASQGESWP
Ga0187874_1023557313300018019PeatlandMRLDRNPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVLAFVFAALWFLARRAWLAKTLSLGVWFLLGAFLIQVRGQPHELQRDASRILTLADGREVTLTARVLREGYARTD
Ga0187857_1045823413300018026PeatlandVGFPQLMTPNRNSPRQPLFWAAVVFSLGLWTGVRAWRPPSWWVFAVVAVVLATSFFLSKRAWLAKALSLGAWVLLGAFLIQVRDQRPGELRQDDARILALVDGSAVTLTGRVMREGYARAAGPRSIRQSIDVETE
Ga0187869_1010374623300018030PeatlandMTRNWNPPRQPLFWAAVSFSLGLWTGVRAWRPPSWWVIAVVAFVLASSWFLTKRAWLAKLLSLGAWLLLGAFLIQVRGQRPDDLRQNAPSILTLADGREVTLTARVMREGYARAAGPQSIREAIDVETEEIASQGKTWP
Ga0187869_1020137713300018030PeatlandMTPNRNSPRQPLFWAAVVFSLGLWTGVRAWRPPSWWVFAVVAVVLATSFFLSKRAWLAKALSLGAWVLLGAFLIQVRDQRPGELRQDDARILALVDGSAVTLTGRVMREGYARAAGPRSI
Ga0187863_1013007413300018034PeatlandMTHEQNPPRQPLFWAALVFSLGLWTGARAWRPPSWWVIAVAAFVFGASWFLSKRGWLAKALSLGAWFLLGAFLIQVQAQRPDENYRDDARLLELADGRPVILTA
Ga0187871_1012842713300018042PeatlandMTRDQKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVAFVFAASWFLARRAWLAKALSLGTWVLLGAFLIQIRGQPPHELQRDDGRILALADGPAVTLTARVMREGHARDAGPRSIRESIDVE
Ga0187859_1019572813300018047PeatlandVGFPQLMTPNRNSPRQPLFWAAVVFSLGLWTGVRAWRPPSWWVFAVVAVVLATSFFLSKRAWLAKALSLGAWVLLGAFLIQVRDQRPGELRQDDARILALVDGSAVTLTGRVMREG
Ga0187852_106328223300019082PeatlandMMLTHKPPRQPLFWAAVAFSLGLWTGVRAWRPPSWWVIAVVVFVFAASWFLSKRAWLGKALSLGAWFLLGAFLIQVRGQPPGELQHEGSRIFALADAAPSHSRRA
Ga0182031_148778543300019787BogMTHDPKPPRQPLFWAAVHFRSGYGGGASVRPPLWWVIAVAVFVSRRHGSCGTRVLAKALSLGAWVLLGALLIQVRGQRPDEPSQDGARLFALADGRPVVPLRV
Ga0210400_1044139923300021170SoilMVQTLKPPRQPLFWAAVAFSLGLWTGTRAWRPPSWWVIAVMAFVFAASWFLPRRAWLAKALSLGAWVLLGAFLIQVRSQTPAEPQPNGDEILTLADGRAVTLTAHIIREGYA
Ga0210388_1010001833300021181SoilMTHERKPPRQPLFWAAAVFSLGLWTGARLWRPPSWWMIALVAFILAASFFLSRRAWLAKSLSLGAWFLVGALLIQVRDQPELVQRNANRLSALADGRSIILIAHLIREGYAPDAYPGANR
Ga0210388_1151324123300021181SoilMTRDRKPPRQPLFWAALIFSAGLWTGARAWRPPSWWAVALVAFVLAATFFLAKRAWLAKGLALGAWFLAGALLIQIHNSPTTDPRLSEVTDGRAVMLTGHIIREGYAHDASPGAT
Ga0210385_1004105443300021402SoilMKRDRRPPRQPLFWAALAFSLGLWTGVRVWRPPSWWVIAVVAFVLATAFFLSKRAWLAKTLSLGAWVLLGAFLIQVRGQPQDKSQDAPGILTLADGRLVTLTA
Ga0213852_125012923300021858WatershedsVIGRGPRAQATEAPGPRSSSRGFSATMTNDRKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVLAALWFIRKRAWLGKTLSLGAWFLLGAFLIQVRGQRADDPLIPALSDGRAVALTARVMRE
Ga0213853_1018701213300021861WatershedsMTNDRKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVLAALWFIRKRAWLGKTLSLGAWFLLGAFLIQVRGQRADDPLIPALSDGRAVALTARVMREGYARTIGPQSIRESIDVETEEIASQGESW
Ga0208192_103083123300025477PeatlandMTHDRKPPRQPLFWAALVFSLGLWTGVRAWRPPSWWVIAVVAFVFATSWFLPRRARLAKALSLGTWFLLGAFLIQIRSQPQGDPRTLALADGRAVTLTGRVMREGYARSAGPR
Ga0208686_103680613300025500PeatlandMTRDQKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWMIAVAAFVLAAWWFLAKRAWLAKVLSLGAWVLLGAFLIQIRGQPPHELQRDDARILALADGSAVTLTARVMREGYARD
Ga0208355_112175913300025581Arctic Peat SoilMTHDRKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIALVAFVFAASWFLPKRAWLAKGLSLGAWFLLGAFLIQIRGQQQDDPRILALADSRAVTLTARVMR
Ga0207926_103813913300025619Arctic Peat SoilMTHDRKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIALVAFVFAASWFLPKRAWLAKGLSLGAWFLLGAFLIQIRGQQQDDPRILALADSRAVTLTARVMREGYARAAGPRSIR
Ga0257161_111307413300026508SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVAFVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQQTDKLQQNDARILALADGREVTLTARVIREGYAQAAGPRSIRESIDVETEEIASQGERWPEQAGV
Ga0208199_112803413300027497Peatlands SoilMTRDQKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVAFVLAAAWFLPKRASLAKALSLGAWVLLGAFLIQVRGQPSHKRQQDEARILALADGRAVSLTARVMREGYARDAGPRSIRE
Ga0209733_104324313300027591Forest SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVAFVFAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQRTDKLQQGDARILALADGREVTLTARVIREGYAQAAGPKSIRESIDVATEE
Ga0208981_110423723300027669Forest SoilMTHDRKPPRQPLFWAALAFSVGLWIGVRAWRPPTWWVIAVLAFVLAASWFLSKRAWLAKALSLGAWILLGAFLIQVRGQQTDKLQQNDARILALADGREVTLIARLIREGYAQAAGPRSIRESIDVETEE
Ga0209118_110849123300027674Forest SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVLAFVLSASWFLSKRAWLANALSLGAWILLGAFLIQVRGQQTDKLQQGDARILALSDGREVTLTARVIREGYARAAGPRSIRE
Ga0209530_115642713300027692Forest SoilMTHERNPLPQPLFWGALAFTLGLWIGVRAWRPPSWWVIGVVTFVLAAFWFLPKRAWMAKTLALGVWFLLGAFLIQVRTQPPDKARDNDRILALADGRPVIMTARVTREGYTQAV
Ga0209656_1018843323300027812Bog Forest SoilMTYDQKAPRQPLFWAALAFSLGLWTGVRAWRPPCWWVIAIAAFIFAASYFVPKRAWLAKIFSLGAWFFLGAFLIQVRSQGPDALRSDASRILAWADGRPVTLTARVKREG
Ga0209040_1038348613300027824Bog Forest SoilMTNEEKPPRQPLFWAAVVFSVGLWTGARAWRPPSWWVIALVAFVFAASCFFRNAAEWPRFSLWGAWFILGAFVIQIRGQEMNESRDAARILGLADGRSVILTAGVIRDGYAREAGPKSVTCGGEDLLHG
Ga0209067_1054972813300027898WatershedsMTHAPNPPCQPLFWAALAFSAGLWVGVRAWRPPSWWVIAVLAFVLAAAWFVSRRAWMAKTLSLGTWFLLAAFLIQLRAGPVADPQILALADGRELTLTAHVIREGYA
Ga0209488_1024819223300027903Vadose Zone SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVFAIVALALAASWFLSKRAWLAKALSLGAWILLGAFLIQVRSQRTDKLQQNDARIFSLADGREVTL
Ga0209698_1112242313300027911WatershedsMTHDRKPPRQPLFWAAVTFSLGLWTGVRAWRPPSWWVIAIVVFVLAACWLLRKRTWLGKTLSLCVWFLLGAFLIQARDQRPVESQQDGPRILALSDGRTVTLIARVMREGYAQPAGVKSIRESIDVETEQ
Ga0302147_1001040813300028566BogMTHDPKPPRQPLFWAAVAFSLGLWVGVRAWRPPLWWVIAVAVFVFAASWFLRKRAWLAKALSLGAWVLLGALLIQVRGQRPDEPSQDGARLFALADGRPVVLTARVMREGYARADGPRSI
Ga0302153_1000367113300028574BogMTHDPKPPRQPLFWAAVAFSLGLWVGVRAWRPPLWWVIAVAVFVFAASWFLRKRAWLAKALSLGAWVLLGALLIQVRGQRPDEPSQDGARLFALADGRPVVLTARVLREGYAR
Ga0302156_1027180933300028748BogMRERKPPRHPLFWAALAFSVGLWTGVRAWRPPSWWVLAVSVFLIAAIWFLGKRDWAAKGLSLGAWFLLGAFLIQVRGQAAEDARLRALADGSPVTLTAHVIREGYA
Ga0302269_114134713300028766BogMRDQKPPRQPLFWAALVFSLGLWTGVHAWRPPVWWVVALLFFFFAASWFLAKRAWLAKTLALGTWFLLGAFLIQVRGQPAGDPVMAALADGRPLILTAHIIREGYAHASGPRSIRESIDVETEEITSEGKVWPVRSGVR
Ga0302266_1001923643300028779BogMTHDPKPPRQPLFWAAVAFSLGLWVGVRAWRPPLWWVIAVAVFVFAASWFLRKRAWLAKALSLGAWVLLGALLIQVRGQRPDEPSQDGARLFALADGRPVVLTARV
Ga0302155_1032764133300028874BogMRERKPPRHPLFWAALAFSVGLWTGVRAWRPPSWWVLAVSVFLIAAIWFLGKRDWAAKGLSLGAWFLLGAFLIQVRGQAAEDARLRALADGSPVTLTAHVI
Ga0311359_1112639813300029914BogMRGWTTPRQPLFWAAMAFSLGLWMGVRAWRPPSWWVIAILAFVFAACWFLRKRAWLSKALALGTWLLLGALVVQIRGQPLGELGENGPGISGFADGRPVTLTERVMREGYARAAGPRSIRESIDVETEAIASGGGSWPVRAGVR
Ga0311328_1025467613300029939BogMRERKPTRHPLFWAALAFSLGLWTGVRAWRPPSWWVLAVSAFLIAAFWFLGKRDWLAKGLSLGAWFLLGAFLIQVRGQAAEDPRLLTLADGRPVTLTAHVIREGYAHASGPRSLRQSID
Ga0311346_1135740813300029952BogMKHDRKPPRQPLFWAAVAFSLGLWVGVRAWRPPLWWVIAVVVFVFAASWFLRKRAWLAKALSLGAWVLLGAFLIQVRGQRPDEPSQDGARLFALADGRPVVLTARVLREGYARAEGPRSIRESID
Ga0311343_1007184853300029953BogMRDQKPPRQPLFWAALVFSLGLWTGVHAWRPPVWWVVALLFFFFAASWFLAKRAWLAKTLALGTWFLLGAFLIQVRGQPAGDPVMAALADGRPLILTAHIIREGYAHASGPRSIRESIDVETEEI
Ga0302277_101298353300029982BogMKHDRKPPRQPLFWAAVAFSLGLWVGVRAWRPPLWWVIAVVVFVFAASWFLRKRAWLAKALSLGAWVLLGAFLIQVRGQRPDEPSQDGARLFALADGRPVVLTARVLREGYARAEGPRSIRE
Ga0302188_1000989863300029986BogMTHDPKPPRQPLFWAAVAFSLGLWVGVRAWRPPLWWVIAVVVFVFAASWFLRKRAWLAKALSLGAWVLLGAFLIQVRGQRPDEPSQDGARLFALADGRPV
Ga0302188_1029689213300029986BogMRDQKPPRQPLFWAALVFSLGLWTGVHAWRPPVWWVVALLFFFFAASWFLAKRAWLAKTLALGTWFLLGAFLIQVRGQPAGDPVMAALADGRPLILTAHIIRE
Ga0302190_1001843653300029988BogMTHDPKPPRQPLFWAAVAFSLGLWVGVRAWRPPLWWVIAVAVFVFAASWFLRKRAWLAKALSLGAWVLLGALLIQVRGQRPDEPSQDGARLFALADGRPVVLTARVLREGYARAEGPRSIRESIDVETEE
Ga0311339_1185571313300029999PalsaMTRDRKPPRQPLFWAAVTFSLGLWTGVRAWRPPSWWVIAAVAFVFAALWFLPKRAWLSKALSLGVWFFLGAFLIQTRGQWPDQSPQDNARILALADGRAVTLTARVMREGLA
Ga0311353_1023094623300030399PalsaMTRDRKPPRQTLFWAAIAFSLGLWTGVRAWRPPSWWVLAVVVFVFAASWFLRKRVWLAKALSLGTWFLLGAFLIQVRGQPPAGLQQDRARLAALSDGRVVTLTGRVMREGYAQAAGARSIRETVDVETEAITSAEDSWPVRAGVR
Ga0310037_1013798423300030494Peatlands SoilMTRDQKPPRQPLFWAALAFSLGLWMGVRAWRPPSWWVIAVVAFVLAAAWFLPKRAWLAKTLSLGAWVLLGAFLIQIRGQPHELQQDEARILALADGRAITLTA
Ga0302275_1064282913300030518BogMKHDRKPPRQPLFWAAVAFSLGLWVGVRAWRPPLWWVIAVVVFVFAASWFLRKRAWLAKALSLGAWVLLGAFLIQVRGQRPDEPSQDGARLFALADGRPVVLTARVLREGYAR
Ga0311345_1006512213300030688BogMRERKPTRHPLFWAALAFSLGLWTGVRAWRPPSWWVLAVSAFLIAAFWFLGKRDWLAKGLSLGAWFLLGAFLIQVRGKAAEDPRLLTLADGRPVTLTAHVIREGYAHASGPRSL
Ga0265331_1043658613300031250RhizosphereMTRDQKLPRQPLFWAAVALSLGLWVGVRAWRPPVWWGIAVVAFVLAASWFLARRTWLSKTLAFGAWVLLGAFLIQIRGQKLDDPHILALADGRVVTLTGRVMREGYARVAGPRSIRESIDMETEEIA
Ga0307475_1039976023300031754Hardwood Forest SoilMTHDRKPPRQPLFWAALAFSLGLWMGVRVWRPPSWWVFAVVAFVFAASWFLAKRAWLAKALSLGGWILLGAFLIQVRGQRPDELQQDDARILALADGREVTLTARVIREGYAQAAGPRSIRESIDVE
Ga0307479_1188989223300031962Hardwood Forest SoilMTHDRKPPRQPLFWAALAFSLGLWMGARAWRPPSWWVIAVVAFVVAASWFLSKRAWLAKALSLSAWILLGAFLIQVRDQRPDKPQQDDARILVLADGREVTLTAHVIREGYAQAAGPLSIRESI
Ga0307472_10068157123300032205Hardwood Forest SoilMTHDRKPPRQPLFWTALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASWFLVRRAWLAKALSLGAWLLLGALLIQIRGQPPDELQQDDARIFALADGRAVTLTARVIREGYARAAGPQSIRESIDVETDEIASQG
Ga0307472_10104861713300032205Hardwood Forest SoilMTHDRKPPRQPLFWAALAFSLGLWTGVRAWRPPSWWVIAVVAFVFAASWFLSKRAWLAKTLSLGAWILLGAFLIQVRGQRPDKPHQDDARILALADGREVTLTARVIREGYAQAAGP
Ga0335081_1222693613300032892SoilLGTESWFQRRLGQAGSDPHAGSAMTHDYNPPRQPLFWAALAFSAGLWVGVRAWRPPSWWAFAVLAFVLAAWWFVPRRAGMAKSLSLGAWILLGAFLIQVRGGGTGDPQILPWADGREVTLTAHVLREGYARAAG
Ga0334854_016079_3_3233300033829SoilMTRDRKPPRQPLFWAAVTFSLGLWTGVRAWRPPSWWVIAVVAFVFAAVWFLTKRAWLSKALSLGVWFLLGAFLIQSRGQWSDQSRPDQGQQDNARILALADGREVTL
Ga0326723_0350270_1_4083300034090Peat SoilMTHDRSPARQPLFWAALAFSLGIWTGARAWRPPSWWAVAILAFALAALWFLRKRAWLAKALSLGVWSLLGALLIQVWGPVSVGDPRILSLADGREVTITAHVMREGYARASGPQSVREPIDLETESIEDESGSRPI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.