Metagenome Family F085417

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085417
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	66 residues
Representative Sequence	MLYELPAAELEELKRAIAASPIVSGPSWLEQRLADWENTRHSADVDTVILAWLASHRPSRETALS
Number of Associated Samples	76
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.96 %
% of genes near scaffold ends (potentially truncated)	19.82 %
% of genes from short scaffolds (< 2000 bps)	85.59 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.459 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.423 % of family members)
Environment Ontology (ENVO)	Unclassified (43.243 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.649 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.54% β-sheet: 0.00% Coil/Unstructured: 49.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00289	Biotin_carb_N	33.33
PF02786	CPSase_L_D2	19.82
PF00578	AhpC-TSA	14.41
PF10417	1-cysPrx_C	5.41
PF02826	2-Hacid_dh_C	1.80
PF09084	NMT1	0.90
PF07690	MFS_1	0.90
PF13379	NMT1_2	0.90
PF00708	Acylphosphatase	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.90
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
All Organisms	root	All Organisms	40.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
cellular organisms	root	All Organisms → cellular organisms	40.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.53 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	7.21 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.13 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	7.21 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.32 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	7.21 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.71 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	7.21 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	7.21 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1.80 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	7.21 %
Methanoregulaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.90 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	7.21 %
unclassified Methanoregulaceae	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.90 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	7.21 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	7.21 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	7.21 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	7.21 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	7.21 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	7.21 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	7.21 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	7.21 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	7.21 %
Methanoregulaceae archaeon PtaB.Bin056	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.90 %
Rhizobium pusense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005181\|Ga0066678_10915556	Not Available	573	Open in IMG/M
3300005332\|Ga0066388_100002345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11499	Open in IMG/M
3300005332\|Ga0066388_100143455	Not Available	2956	Open in IMG/M
3300005332\|Ga0066388_100254152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2397	Open in IMG/M
3300005332\|Ga0066388_100648991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1670	Open in IMG/M
3300005332\|Ga0066388_101816058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1084	Open in IMG/M
3300005332\|Ga0066388_101922106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1057	Open in IMG/M
3300005332\|Ga0066388_102837396	Not Available	885	Open in IMG/M
3300005332\|Ga0066388_103377319	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005332\|Ga0066388_104098678	Not Available	743	Open in IMG/M
3300005332\|Ga0066388_104716445	Not Available	694	Open in IMG/M
3300005446\|Ga0066686_10333895	Not Available	1033	Open in IMG/M
3300005555\|Ga0066692_10139335	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1481	Open in IMG/M
3300005618\|Ga0068864_102143462	Not Available	565	Open in IMG/M
3300005713\|Ga0066905_100126427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1795	Open in IMG/M
3300005713\|Ga0066905_100238473	Not Available	1389	Open in IMG/M
3300005713\|Ga0066905_101234626	Not Available	669	Open in IMG/M
3300005764\|Ga0066903_100030642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6070	Open in IMG/M
3300005764\|Ga0066903_100997198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1530	Open in IMG/M
3300005764\|Ga0066903_105085113	Not Available	697	Open in IMG/M
3300005764\|Ga0066903_105187413	Not Available	689	Open in IMG/M
3300005764\|Ga0066903_105394916	Not Available	675	Open in IMG/M
3300005833\|Ga0074472_10329006	Not Available	508	Open in IMG/M
3300005833\|Ga0074472_10931143	Not Available	771	Open in IMG/M
3300005833\|Ga0074472_10933059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5535	Open in IMG/M
3300005833\|Ga0074472_11443520	Not Available	3509	Open in IMG/M
3300005841\|Ga0068863_100149459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2235	Open in IMG/M
3300005883\|Ga0075299_1015001	Not Available	717	Open in IMG/M
3300005937\|Ga0081455_10006438	All Organisms → cellular organisms → Bacteria	12584	Open in IMG/M
3300005983\|Ga0081540_1086682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1390	Open in IMG/M
3300006797\|Ga0066659_10725763	Not Available	814	Open in IMG/M
3300006847\|Ga0075431_100590435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1095	Open in IMG/M
3300006854\|Ga0075425_100093471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3412	Open in IMG/M
3300007788\|Ga0099795_10025183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1993	Open in IMG/M
3300009090\|Ga0099827_10890560	Not Available	771	Open in IMG/M
3300009147\|Ga0114129_10806591	Not Available	1197	Open in IMG/M
3300009792\|Ga0126374_10526164	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300010043\|Ga0126380_10459257	Not Available	965	Open in IMG/M
3300010043\|Ga0126380_10769675	Not Available	783	Open in IMG/M
3300010043\|Ga0126380_12085806	Not Available	521	Open in IMG/M
3300010046\|Ga0126384_10587043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium pusense	973	Open in IMG/M
3300010046\|Ga0126384_11120184	Not Available	722	Open in IMG/M
3300010046\|Ga0126384_11401461	Not Available	652	Open in IMG/M
3300010046\|Ga0126384_11427255	Not Available	646	Open in IMG/M
3300010047\|Ga0126382_10224971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1355	Open in IMG/M
3300010047\|Ga0126382_10516781	Not Available	964	Open in IMG/M
3300010358\|Ga0126370_10882065	Not Available	806	Open in IMG/M
3300010358\|Ga0126370_10950312	Not Available	780	Open in IMG/M
3300010359\|Ga0126376_10928582	Not Available	863	Open in IMG/M
3300010359\|Ga0126376_11905427	Not Available	634	Open in IMG/M
3300010360\|Ga0126372_11176950	Not Available	790	Open in IMG/M
3300010362\|Ga0126377_10258555	Not Available	1699	Open in IMG/M
3300010362\|Ga0126377_10527610	Not Available	1216	Open in IMG/M
3300010362\|Ga0126377_10635725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1115	Open in IMG/M
3300010362\|Ga0126377_11379107	Not Available	778	Open in IMG/M
3300010362\|Ga0126377_13291091	Not Available	522	Open in IMG/M
3300010366\|Ga0126379_11095319	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	902	Open in IMG/M
3300010398\|Ga0126383_10208536	Not Available	1883	Open in IMG/M
3300010403\|Ga0134123_10511336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1133	Open in IMG/M
3300010868\|Ga0124844_1036030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1630	Open in IMG/M
3300012199\|Ga0137383_10675697	Not Available	755	Open in IMG/M
3300012200\|Ga0137382_10393985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M
3300012206\|Ga0137380_11464207	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	567	Open in IMG/M
3300012207\|Ga0137381_10055126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3292	Open in IMG/M
3300012209\|Ga0137379_10240718	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	1723	Open in IMG/M
3300012209\|Ga0137379_11395125	Not Available	604	Open in IMG/M
3300012210\|Ga0137378_10804220	Not Available	852	Open in IMG/M
3300012212\|Ga0150985_105433796	Not Available	1017	Open in IMG/M
3300012212\|Ga0150985_122771846	Not Available	501	Open in IMG/M
3300012349\|Ga0137387_10585446	Not Available	809	Open in IMG/M
3300012351\|Ga0137386_10199287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1438	Open in IMG/M
3300012357\|Ga0137384_10276525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1399	Open in IMG/M
3300012360\|Ga0137375_10383005	Not Available	1235	Open in IMG/M
3300012361\|Ga0137360_11013799	Not Available	716	Open in IMG/M
3300012685\|Ga0137397_10044196	All Organisms → cellular organisms → Bacteria → Proteobacteria	3186	Open in IMG/M
3300012924\|Ga0137413_11594200	Not Available	533	Open in IMG/M
3300012925\|Ga0137419_10614462	Not Available	874	Open in IMG/M
3300012927\|Ga0137416_11330626	Not Available	649	Open in IMG/M
3300012929\|Ga0137404_10182368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1768	Open in IMG/M
3300012930\|Ga0137407_10466876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1176	Open in IMG/M
3300012930\|Ga0137407_10840170	Not Available	868	Open in IMG/M
3300012930\|Ga0137407_11083887	Not Available	759	Open in IMG/M
3300012944\|Ga0137410_10011825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5921	Open in IMG/M
3300012948\|Ga0126375_10117476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1614	Open in IMG/M
3300012948\|Ga0126375_11552551	Not Available	568	Open in IMG/M
3300014968\|Ga0157379_10526698	Not Available	1098	Open in IMG/M
3300014969\|Ga0157376_10235372	Not Available	1703	Open in IMG/M
3300017997\|Ga0184610_1198432	Not Available	670	Open in IMG/M
3300018028\|Ga0184608_10008756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3386	Open in IMG/M
3300018066\|Ga0184617_1014274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1660	Open in IMG/M
3300018071\|Ga0184618_10497279	Not Available	511	Open in IMG/M
3300018078\|Ga0184612_10141275	Not Available	1260	Open in IMG/M
3300018081\|Ga0184625_10156076	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1192	Open in IMG/M
3300019789\|Ga0137408_1431797	Not Available	3938	Open in IMG/M
3300021560\|Ga0126371_13559635	Not Available	526	Open in IMG/M
3300026095\|Ga0207676_12338564	Not Available	532	Open in IMG/M
3300026369\|Ga0257152_1009902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1004	Open in IMG/M
3300027775\|Ga0209177_10323706	Not Available	595	Open in IMG/M
3300027778\|Ga0209464_10020356	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon PtaB.Bin056	2088	Open in IMG/M
3300027903\|Ga0209488_10001650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19016	Open in IMG/M
3300028536\|Ga0137415_10897451	Not Available	696	Open in IMG/M
3300028719\|Ga0307301_10045259	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1347	Open in IMG/M
3300028811\|Ga0307292_10102760	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1125	Open in IMG/M
3300028814\|Ga0307302_10567289	Not Available	564	Open in IMG/M
3300031152\|Ga0307501_10009700	Not Available	1567	Open in IMG/M
3300031184\|Ga0307499_10039413	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1113	Open in IMG/M
3300031198\|Ga0307500_10034811	Not Available	1157	Open in IMG/M
3300031740\|Ga0307468_100366555	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	1082	Open in IMG/M
3300032174\|Ga0307470_11160856	Not Available	625	Open in IMG/M
3300032180\|Ga0307471_102208639	Not Available	693	Open in IMG/M
3300033004\|Ga0335084_12147571	Not Available	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.19%
Host-Associated	Host-Associated	10.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.28%
Plants	Host-Associated → Plants	10.81%
Aquatic	Environmental → Aquatic	9.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.28%
Sediment	Environmental → Aquatic → Sediment	9.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.50%
Freshwater	Environmental → Aquatic → Freshwater	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.36%
Loam	Environmental → Terrestrial → Soil → Loam	17.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.12%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.80%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005883	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_302	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066678_109155562	3300005181	Soil	AAELEELKQAIVSSPIVSGPSWLELRLADWENTRHAADVDTVILAWLVSHRPGRETPLS*
Ga0066388_10000234510	3300005332	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVSGPSWLELRLADWENTRHAADVDTVVLAWLVSHRPSQETTLS*
Ga0066388_1001434553	3300005332	Tropical Forest Soil	MSEAEWGASMLYELPAAELDELKSAIAASPIVSGPSWLERRLSDWENTRRSADVDAVILAWLASHRPTRDTTLS*
Ga0066388_1002541522	3300005332	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVSGASWLELRLADWENTRHAADVDTVILAWLVSHRPSRETTLS*
Ga0066388_1006489912	3300005332	Tropical Forest Soil	MLYELPADLEELKRAIAASPIVSGPSWLQQRLADWENTRHAADVDTVILEWLVSHRPSRETALS*
Ga0066388_1018160581	3300005332	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVTGPSWLELRLADWENTRHAADVDTVILAWLASHRPHQETALS*
Ga0066388_1019221061	3300005332	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVSGPSWLEQRLADWENTRHAADVDTVILAWLVSHRPSQETTLS*
Ga0066388_1028373961	3300005332	Tropical Forest Soil	MLYELPAADPAAELDEIKRAIAASPIVSGPSWLELRLADWENTRHSADVDTVVLAWLASHRSGQGTTLS*
Ga0066388_1033773192	3300005332	Tropical Forest Soil	MLYELPADLDELKRAIAASPIVSGPSWLEMRLNDWENTRRSADVDKVILEWLVSHRPSRETTLS*
Ga0066388_1040986782	3300005332	Tropical Forest Soil	MLYELPAAELDELKSAIAASPIVSGPSWLERRLSDWQNTRLSADVDAVILAWLASHRPTRDTALS*
Ga0066388_1047164452	3300005332	Tropical Forest Soil	MLYELPADLDELKRAVAASPIVSGPSWLERRLSDWENTRLSADVDKVILEWLVSHR
Ga0066686_103338951	3300005446	Soil	MLYELPAAELEELKQAIVSSPIVSGPSWLELRLADWENTRHAADVDTVILAWLVSHRPGRETPLS*
Ga0066692_101393352	3300005555	Soil	MLYELPADLEELKRAVAASPIVTGPSWLELRLADWENTRHAADVDTVILEWLVSHRPSQETTLS*
Ga0068864_1021434621	3300005618	Switchgrass Rhizosphere	MLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSQRPTRETALS*
Ga0066905_1001264272	3300005713	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVSGPSWLEQRLADWENTRHAADVDTVILAWLASHRPSREAALS*
Ga0066905_1002384732	3300005713	Tropical Forest Soil	LEELKRAIAASPIVSGPSWLEQRLADWENTRHAADVDTVILAWLVSHRPSRETTLS*
Ga0066905_1012346262	3300005713	Tropical Forest Soil	RAIAASPIVSGPSWLEQRLADWENTRHAADVDTVVLAWLVSHRPSRETTLS*
Ga0066903_1000306427	3300005764	Tropical Forest Soil	MLYELPADLDELKRAVAASPIVSGPSWLERRLSDWENTRHSADVDMVILEWLVSQRPSRDTALS*
Ga0066903_1009971982	3300005764	Tropical Forest Soil	MLYELPADLEELKRAIAASPIVTGPSWLELRLADWENTRRSADVDAVVLAWLVGHRTSQETALS*
Ga0066903_1050851132	3300005764	Tropical Forest Soil	ELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDAVILAWLASHRPTRNAALS*
Ga0066903_1051874132	3300005764	Tropical Forest Soil	ELDELKSAIAASPIVSGPSWLEMRLSDWQNTRFSADVDTVILEWLVSQRPTRETALS*
Ga0066903_1053949162	3300005764	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVSGPSWLELRLADWENTRHAADVDTVILAWLVSHRPSRETTLS*
Ga0074472_103290061	3300005833	Sediment (Intertidal)	EYSRKREGSASMMYELPAADLTELKRAIATSPIVTGQSWLEVRLADWENTRRSPDVDKVILAWLASHRRPRAALL*
Ga0074472_109311431	3300005833	Sediment (Intertidal)	MMYELADLNELKRAIATSPIVTGASWLEARLADWENTRRSPDVDRVVLAWLASHRLPRAALH*
Ga0074472_109330595	3300005833	Sediment (Intertidal)	MMYELAAADLNALKRAIAASPIVTGASWLEARLADWENTRRSPEVDRVVLAWLASHRLPRAALH*
Ga0074472_114435202	3300005833	Sediment (Intertidal)	MMYQLPAADLNELEHAIVNSPIVAEPSWLEVRLADWQNTRVSPDVDAVILAWLASHRVASRAALS*
Ga0068863_1001494592	3300005841	Switchgrass Rhizosphere	MPEAEWGASMLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSQRPTRETALS*
Ga0075299_10150012	3300005883	Rice Paddy Soil	MKYVLPVADLDEIRQAIAASPIVTGRSWLEARLADWENTRRSSDVDQVILAWLASQRAERKAALV*
Ga0081455_1000643813	3300005937	Tabebuia Heterophylla Rhizosphere	MLYELPAAELEELKRAIAASPIVSGPSWLEQRLADWENTRHSADVDTVILAWLASHRPSRETALS*
Ga0081540_10866822	3300005983	Tabebuia Heterophylla Rhizosphere	MPEAEWGASMLYELPAAELDEIKSAIAASPIVSGPSWLEMRLSDWANTRLSADVDTVILEWLVSHRTARETTLS*
Ga0066659_107257631	3300006797	Soil	MLYELPTAELDELKCAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILAWLVSHRPTRDAALS*
Ga0075431_1005904352	3300006847	Populus Rhizosphere	MPEAEWGASMLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSHRPPTRPTALS*
Ga0075425_1000934714	3300006854	Populus Rhizosphere	MPEAEWGASMLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSHRPTRQTALS*
Ga0099795_100251832	3300007788	Vadose Zone Soil	MLYELPADLEELKRAVAASPIVSGPSWLEMRLSDWENTRRSDDVDTVILAWLASHRTTRDTALS*
Ga0099827_108905602	3300009090	Vadose Zone Soil	MLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRTTRDTALS*
Ga0114129_108065912	3300009147	Populus Rhizosphere	MPEAEWGASMLYELPVAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSHRPTRQTALS*
Ga0126374_105261641	3300009792	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVSGPSWLEQRLTDWENTRHSADVDTVILEWLASHRPSRETTLS*
Ga0126380_104592571	3300010043	Tropical Forest Soil	MLYELPADLDELKRAVAASPIVSGPSWLERRLSDWENTRHSADVDMVILEWLVSQR
Ga0126380_107696751	3300010043	Tropical Forest Soil	MLYELPAAELDELKSAIAASPIVSGPSWLEMRLNDWQNTRLSADVDRVILEWLVSHRSTRETTLS*
Ga0126380_120858061	3300010043	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVTGPSWLELRLADWENTRHSADVDTVILAWLVSHRPSQETALS*
Ga0126384_105870432	3300010046	Tropical Forest Soil	MLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDIVILEWLVSHRPTRPAALS*
Ga0126384_111201841	3300010046	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVSGPSWLELRLADWENTRHAADVDTVVLAWLVSHRPSQETALS*
Ga0126384_114014612	3300010046	Tropical Forest Soil	LYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDRVILEWLVSHRSTRETTLS*
Ga0126384_114272551	3300010046	Tropical Forest Soil	MLYELPADLDELKRAIAASPIVSGPSWLEMRLSDWENTRRSADVDKVILEWLVSHRPSRETTLS*
Ga0126382_102249712	3300010047	Tropical Forest Soil	MLYELPATELEELKRAIAASPIVTGPSWLELRLADWENTRHAADVDTVILAWLASHRPHQETALS*
Ga0126382_105167811	3300010047	Tropical Forest Soil	MLYELPAAELEELRRAIAASPIVSGPSWLEQRLADWENTRHAADVDTVVLAWLVSHRPSRETTLS*
Ga0126370_108820651	3300010358	Tropical Forest Soil	MLYELPADLEELKRAVAASPIVSGPSWLEARLADWENTRHAADVDTVVLAWLVSHRPTQETTLS*
Ga0126370_109503121	3300010358	Tropical Forest Soil	MLYELPADLEELKRAIAASPIVTGPSWLELRLADWENTRRSADVDAVVLAWLVGHRTSRETELS*
Ga0126376_109285821	3300010359	Tropical Forest Soil	MPEAEWGASMLYELPAAELDELKSAIAASPIVSGPSWLEMRLNDWQNTRLSADVDRVILEWLVSHRSTRETTLS*
Ga0126376_119054271	3300010359	Tropical Forest Soil	LYELPADLEEFKRAIAASPIVTGPSWLELRLADWENTRRSADVDAVVLAWLVSHRTSQETALS*
Ga0126372_111769502	3300010360	Tropical Forest Soil	LYELPADLDELKRAVAASPIVSGPSWFERRLSDWENTRHSADVDMVILEWLVSQRPSRDTALS*
Ga0126377_102585552	3300010362	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVSGASWLEQRLADWENTRHSADVDTVILAWLASHRSNREAALS*
Ga0126377_105276102	3300010362	Tropical Forest Soil	MLYELPADLEELKRAVAASQIVSGPSWLELRLADWENTRRSADVDTVILAWLVSHRPSREPAPLS*
Ga0126377_106357252	3300010362	Tropical Forest Soil	MLYELPAAELEELKGAIATSPIVSGPSWLEQRLADWENTRHAADVDTVILAWLASHRPSQETTLS*
Ga0126377_113791071	3300010362	Tropical Forest Soil	MPEAEWGASMLYELPAAELEELKSAIAASPIVSGPSWLELRLNDWQNTRLSADVDTVILEWLVSQRPTRQTALS*
Ga0126377_132910911	3300010362	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVSGPSWLEQRLADWENTRHAADVDTVILAWLVSHRPSRETTLS*
Ga0126379_110953191	3300010366	Tropical Forest Soil	MLYELPADLEELKRAIAVSPIVTGPSWLELRLADWENTRRSADVDAVVLAWLVGHRTSQETALS*
Ga0126383_102085363	3300010398	Tropical Forest Soil	MLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRRSADVDRVILEWLVSHRSTRETTLS*
Ga0134123_105113362	3300010403	Terrestrial Soil	MPEAEWGVSMLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSQRPTRETALS*
Ga0124844_10360302	3300010868	Tropical Forest Soil	AAELEELKRAIAASPIVSGPSWLEQRLADWENTRHAADVDTVILAWLVSHRPSQETTLS*
Ga0137383_106756971	3300012199	Vadose Zone Soil	MLYELPTAELDELKSAIAASPILSGPSWLEMRLSDWQNTRLSADVDTVILAWLVSHRPTRDAA
Ga0137382_103939852	3300012200	Vadose Zone Soil	MPEAEWSASMLYELPADLDELKRAVAASPIVSGPSWLEMRLSDWENTRRSDDVDTVILAWLASHRTNRDTALS*
Ga0137380_114642072	3300012206	Vadose Zone Soil	ELKRAVAASPIVSGPSWLEMRLSDWENTRRSDDVDTVILAWLVSHRPTRDTALS*
Ga0137381_100551262	3300012207	Vadose Zone Soil	MPEAEWGASMLYELPADLDELKRAVAASPIVSGPSWLEMRLSDWENTRRSDDVDTVILAWLASHRTTRDTALS*
Ga0137379_102407181	3300012209	Vadose Zone Soil	MPEAEWGASMLYELPTAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILAWLVSHRPARDTALS*
Ga0137379_113951252	3300012209	Vadose Zone Soil	MLYELPTAELDELKSAIAASPILSGPSWLETRLSDWQNTRLSADVDTVILAWLVSHRPTRDAALS*
Ga0137378_108042201	3300012210	Vadose Zone Soil	MPEAEWGASMLYELPTAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILAWLVSHRPTRDTTLS*
Ga0150985_1054337962	3300012212	Avena Fatua Rhizosphere	MLYELPADLEELKRAVAASPIVSGPSWLEMRLSDWENTRRSADVDTVVLAWLVSHRPVRDNALS*
Ga0150985_1227718461	3300012212	Avena Fatua Rhizosphere	MPEAEWSASMLYELPADLDELKRAVAASPIVSGPSWLEMRLKDWQNTRHSADVDTVILEWLVSHRPTRGTVLSS*
Ga0137387_105854462	3300012349	Vadose Zone Soil	MPEAEWGASMLYELPTAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILAWLVSHRPTRDTALS*
Ga0137386_101992872	3300012351	Vadose Zone Soil	MPEAEWSASMLYELPTAELDELKSAIAASPIVSGPSWLEMRLSDWENTRRSDDVDTVILAWLASHRTTRDTALS*
Ga0137384_102765252	3300012357	Vadose Zone Soil	MLYELPTAELDELKSAIAASPILSGPSWLEKRLSDWQNTRLSADVDTVILAWLVSHRPTRDAALS*
Ga0137375_103830052	3300012360	Vadose Zone Soil	MPEAEWSASMLYELPADLDELKRAVAASPIVSGPSWLEMRLSDWENTRRSDDVDTVILAWLASHRTTRDTALS*
Ga0137360_110137991	3300012361	Vadose Zone Soil	MPEAEWSASMLYELPADLDELKRAVAASPIVSGPSWLEMRLSDWENTRRSDDVDAVILAWLASHRTTRDTALS*
Ga0137397_100441963	3300012685	Vadose Zone Soil	MPEAEWSASMLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRATRDTALS*
Ga0137413_115942001	3300012924	Vadose Zone Soil	MLYELPADLDELKRAVAASPIVSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRTTRDTALS*
Ga0137419_106144622	3300012925	Vadose Zone Soil	MLYELPADLDELKRAVAASPIVSGPSWLEMRLSDWENTRRSDDVDAVVLAWLASHRTTRDTTLS*
Ga0137416_113306261	3300012927	Vadose Zone Soil	MVYELPADLEELKRAVAASQIVSGPSWLEMRLSDWENTRRSDDVDAVVLAWLASHRTTRDTTLS*
Ga0137404_101823682	3300012929	Vadose Zone Soil	MLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRVPRDTALS*
Ga0137407_104668762	3300012930	Vadose Zone Soil	MLYELPADLDELKRAVAASPIVSGPSWLEMRLSDWENTRRSDDVDTVILAWLASHRTTRDTALS*
Ga0137407_108401701	3300012930	Vadose Zone Soil	ELKRAVAGSPIVSGPSWLELRLADWENTRHSADVDTVILAWLVSHRPSRETALS*
Ga0137407_110838872	3300012930	Vadose Zone Soil	MPEAEWSASMLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHR
Ga0137410_100118254	3300012944	Vadose Zone Soil	MLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRATRDTALS*
Ga0126375_101174762	3300012948	Tropical Forest Soil	MLYELPAAELEELKRAIAASPIVTGPSWLELRLADWENTRHAADVDTVILAWLVSHRPHQETALS*
Ga0126375_115525511	3300012948	Tropical Forest Soil	MLYELPADLEELKRAIAASPIVTGPSWLELRLADWENTRRSADVDAVVLAWLVGHRTSQETALS
Ga0157379_105266981	3300014968	Switchgrass Rhizosphere	LPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSQRPTRETALS*
Ga0157376_102353722	3300014969	Miscanthus Rhizosphere	MPEAEWGASMLYELPAAELDELKSAIAASPIVSGPYWLEMRLSDWQNTRLSADVDTVILEWLVSQRPTRETALS*
Ga0184610_11984321	3300017997	Groundwater Sediment	MCELPAADLNELGSAIANSPIVAEQSWLEARLADWQNTRRSPDVDTVILAWLASHRVASRSTLS
Ga0184608_100087562	3300018028	Groundwater Sediment	MLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRATRDTALT
Ga0184617_10142742	3300018066	Groundwater Sediment	MLYELPADLEELKRAVAASPIVSGASWLEMRLSDWENTRRSDDVDTVILAWLASHRTTRDTALS
Ga0184618_104972791	3300018071	Groundwater Sediment	MVYELPADLEELKRAVAASQIVSGPSWLEMRLSDWENTRRSDDVDAVVLAWLASHRTTRDTTLS
Ga0184612_101412752	3300018078	Groundwater Sediment	MYELPAADQNELESAIANSPIVAEQSWLEARLADWQNTRNSADVDTVILAWLASHRVASRSPLS
Ga0184625_101560762	3300018081	Groundwater Sediment	MPEAEWGASMLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILAWLVSQRPTRDTTLS
Ga0137408_14317972	3300019789	Vadose Zone Soil	MLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRVPRDTALS
Ga0126371_135596352	3300021560	Tropical Forest Soil	MLYESPADLEELKRAIAASPIVTGPSWLELRLADWENTRRSADVDAVVLAWLVGHRTSQETALS
Ga0207676_123385641	3300026095	Switchgrass Rhizosphere	ELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSQRPTRETALS
Ga0257152_10099021	3300026369	Soil	MLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRATRDTALS
Ga0209177_103237061	3300027775	Agricultural Soil	MLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWETTRLSADVDTVILEWLVSHRPTRQTALS
Ga0209464_100203561	3300027778	Wetland Sediment	MMYQLPAADLNELEHAIVNSPIVAEPSWLEVRLADWQNTRVSPDVDAVILAWLASHRVASRAALS
Ga0209488_100016506	3300027903	Vadose Zone Soil	MLYELPADLEELKRAVAASPIVSGPSWLEMRLSDWENTRRSDDVDTVILAWLASHRTTRDTALS
Ga0137415_108974512	3300028536	Vadose Zone Soil	MLYELPTAELDELKSAIAASPILSGPSWLEMRLSDWQNTRLSADVDTVILAWLVSHRPTRDAALS
Ga0307301_100452592	3300028719	Soil	MLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRTPRDTALS
Ga0307292_101027602	3300028811	Soil	MLYELPADLEELKRAVAASPIVSGPSWLEMRLSDWENTRRSADVDTVVLAWLVSHRPTRDNALS
Ga0307302_105672891	3300028814	Soil	DLRDAIAASPIVSGPSWLEMRLSDWENTRLSADVDTVILEWLVSHRTARETTLS
Ga0307501_100097002	3300031152	Soil	MLYELPADLEKLKRAVAASPILSGPSWLEMRLSDWENTRHSDDVDTVILAWLASHRTTQDTALS
Ga0307499_100394132	3300031184	Soil	MLYELPADLEELKRAVAASPIVSGPSWLEMRLSDWENTRRSADVDMVVLAWLASHRPTRDAALS
Ga0307500_100348111	3300031198	Soil	MPEAEWGASMLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSQRPTRETALS
Ga0307468_1003665551	3300031740	Hardwood Forest Soil	MLYELPAAELEELKRAIAASPIVSGPSWLEQRLADWENTRHSADVDTVILEWLVSHRPSRETTLS
Ga0307470_111608561	3300032174	Hardwood Forest Soil	MPEAEWGASMLYELPAAELDELKSAIAASPIVSGPSWLEMRLSDWQNTRLSADVDTVILEWLVSQRPARETALS
Ga0307471_1022086391	3300032180	Hardwood Forest Soil	EWSESMLYELPAAELEELKRAIAASPIVSGPSWLEQRLADWENTRHSADVDTVILEWLVSHRPSRETTLS
Ga0335084_121475711	3300033004	Soil	MPEAEWGASMLYELPAAELNELKSAIAASPIVSGPSWLEMRLSDWQNTRLSSDVDTVILEWLVSHRPTRQTALS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085417

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences