Metagenome / Metatranscriptome Family F085401

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085401
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	60 residues
Representative Sequence	MMSATEYGVLKGYSEKSTRVHQIIRSGVFPPEWVQAPKKIGNQWVVFVDPNWIKDGR
Number of Associated Samples	80
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	28.83 %
% of genes near scaffold ends (potentially truncated)	13.51 %
% of genes from short scaffolds (< 2000 bps)	64.86 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.180 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (23.423 % of family members)
Environment Ontology (ENVO)	Unclassified (45.946 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (53.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.65% β-sheet: 24.71% Coil/Unstructured: 57.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF04404	ERF	45.95
PF13148	DUF3987	2.70
PF04466	Terminase_3	2.70
PF08291	Peptidase_M15_3	1.80
PF00145	DNA_methylase	1.80
PF13426	PAS_9	0.90
PF04586	Peptidase_S78	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	2.70
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	1.80
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
All Organisms	root	All Organisms	19.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Viruses	superkingdom	All Organisms → Viruses	10.81 %
cellular organisms	root	All Organisms → cellular organisms	9.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.60 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.60 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.80 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	1.80 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	1.80 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.80 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1.80 %
Lactobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae	1.80 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.90 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Dysgonomonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae	1.80 %
Weissella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella	1.80 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.80 %
unclassified Podoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae	0.90 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Dysgonomonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Dysgonomonas	1.80 %
Weissella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella	1.80 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.80 %
crAss-like viruses	clade	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses	0.90 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
unclassified Dysgonomonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Dysgonomonas → unclassified Dysgonomonas	1.80 %
Weissella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella	1.80 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.80 %
unclassified Crassvirales	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales	0.90 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.41 %
Dysgonomonas sp. 521	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Dysgonomonas → unclassified Dysgonomonas → Dysgonomonas sp. 521	1.80 %
Weissella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella	1.80 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.80 %
Podoviridae sp. ctrTa16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales → Podoviridae sp. ctrTa16	0.90 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002296\|B570J29587_1000406	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4506	Open in IMG/M
3300002408\|B570J29032_108833628	Not Available	520	Open in IMG/M
3300002408\|B570J29032_109280260	Not Available	669	Open in IMG/M
3300002835\|B570J40625_100030317	Not Available	8539	Open in IMG/M
3300002835\|B570J40625_100099646	Not Available	3599	Open in IMG/M
3300003499\|JGI25930J51415_1036325	Not Available	875	Open in IMG/M
3300004054\|Ga0063232_10011804	Not Available	1936	Open in IMG/M
3300004096\|Ga0066177_10009829	All Organisms → cellular organisms → Bacteria	2876	Open in IMG/M
3300004112\|Ga0065166_10058761	Not Available	1301	Open in IMG/M
3300004240\|Ga0007787_10635620	Not Available	534	Open in IMG/M
3300005662\|Ga0078894_10004030	Not Available	11191	Open in IMG/M
3300005662\|Ga0078894_10120854	Not Available	2331	Open in IMG/M
3300005805\|Ga0079957_1014463	All Organisms → cellular organisms → Bacteria	5766	Open in IMG/M
3300005826\|Ga0074477_1454972	Not Available	2031	Open in IMG/M
3300005828\|Ga0074475_10656209	Not Available	1491	Open in IMG/M
3300006802\|Ga0070749_10010970	Not Available	5855	Open in IMG/M
3300006802\|Ga0070749_10061208	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2271	Open in IMG/M
3300006802\|Ga0070749_10554347	Not Available	623	Open in IMG/M
3300007538\|Ga0099851_1199232	Not Available	729	Open in IMG/M
3300007974\|Ga0105747_1327897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella	521	Open in IMG/M
3300008106\|Ga0114339_1212093	Not Available	634	Open in IMG/M
3300008107\|Ga0114340_1037697	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2178	Open in IMG/M
3300008108\|Ga0114341_10038911	Not Available	3181	Open in IMG/M
3300008116\|Ga0114350_1001279	Not Available	21911	Open in IMG/M
3300008120\|Ga0114355_1005496	Not Available	7531	Open in IMG/M
3300008266\|Ga0114363_1010411	Not Available	4432	Open in IMG/M
3300008266\|Ga0114363_1143631	Not Available	799	Open in IMG/M
3300008266\|Ga0114363_1198188	Not Available	619	Open in IMG/M
3300008266\|Ga0114363_1198402	Not Available	619	Open in IMG/M
3300008266\|Ga0114363_1226977	Not Available	547	Open in IMG/M
3300008448\|Ga0114876_1000383	Not Available	34961	Open in IMG/M
3300008450\|Ga0114880_1265727	Not Available	524	Open in IMG/M
3300009026\|Ga0102829_1309816	Not Available	527	Open in IMG/M
3300009037\|Ga0105093_10248536	Not Available	931	Open in IMG/M
3300009081\|Ga0105098_10158876	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300009085\|Ga0105103_10002641	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9285	Open in IMG/M
3300009085\|Ga0105103_10659364	Not Available	599	Open in IMG/M
3300009149\|Ga0114918_10478776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella	669	Open in IMG/M
3300009165\|Ga0105102_10006040	Not Available	4445	Open in IMG/M
3300009165\|Ga0105102_10021385	Not Available	2619	Open in IMG/M
3300009165\|Ga0105102_10045076	All Organisms → Viruses → Predicted Viral	1918	Open in IMG/M
3300009165\|Ga0105102_10192143	Not Available	1016	Open in IMG/M
3300009169\|Ga0105097_10468295	Not Available	703	Open in IMG/M
3300009169\|Ga0105097_10560631	Not Available	641	Open in IMG/M
3300009169\|Ga0105097_10677201	Not Available	583	Open in IMG/M
3300009474\|Ga0127390_1021127	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300010354\|Ga0129333_10935745	Not Available	731	Open in IMG/M
3300011183\|Ga0136713_1004587	Not Available	1724	Open in IMG/M
3300011339\|Ga0153700_10201	Not Available	31509	Open in IMG/M
3300013004\|Ga0164293_10195896	Not Available	1463	Open in IMG/M
3300013005\|Ga0164292_10114772	Not Available	2011	Open in IMG/M
3300013372\|Ga0177922_10361371	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1344	Open in IMG/M
3300017707\|Ga0181363_1002873	Not Available	3903	Open in IMG/M
3300017707\|Ga0181363_1004975	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales → Podoviridae sp. ctrTa16	2901	Open in IMG/M
3300017707\|Ga0181363_1019863	Not Available	1325	Open in IMG/M
3300017707\|Ga0181363_1047688	Not Available	773	Open in IMG/M
3300017736\|Ga0181365_1037661	Not Available	1217	Open in IMG/M
3300017747\|Ga0181352_1133478	Not Available	664	Open in IMG/M
3300017754\|Ga0181344_1189725	Not Available	579	Open in IMG/M
3300017761\|Ga0181356_1084512	Not Available	1050	Open in IMG/M
3300017774\|Ga0181358_1056716	Not Available	1470	Open in IMG/M
3300017784\|Ga0181348_1129625	Not Available	962	Open in IMG/M
3300017785\|Ga0181355_1101338	Not Available	1190	Open in IMG/M
3300017788\|Ga0169931_10008422	Not Available	15052	Open in IMG/M
3300019122\|Ga0188839_1001934	Not Available	3394	Open in IMG/M
3300019784\|Ga0181359_1025268	Not Available	2271	Open in IMG/M
3300019784\|Ga0181359_1050964	Not Available	1596	Open in IMG/M
3300020151\|Ga0211736_10662636	Not Available	1317	Open in IMG/M
3300020160\|Ga0211733_10767060	Not Available	1262	Open in IMG/M
3300020527\|Ga0208232_1017327	Not Available	1057	Open in IMG/M
3300020539\|Ga0207941_1043004	Not Available	597	Open in IMG/M
3300020574\|Ga0208221_1058216	Not Available	710	Open in IMG/M
3300021961\|Ga0222714_10007296	Not Available	10150	Open in IMG/M
3300021961\|Ga0222714_10109865	Not Available	1725	Open in IMG/M
3300021961\|Ga0222714_10246431	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Dysgonomonas → unclassified Dysgonomonas → Dysgonomonas sp. 521	1005	Open in IMG/M
3300021961\|Ga0222714_10635039	Not Available	529	Open in IMG/M
3300021962\|Ga0222713_10505216	Not Available	722	Open in IMG/M
3300022179\|Ga0181353_1007486	All Organisms → Viruses → Predicted Viral	2656	Open in IMG/M
3300022407\|Ga0181351_1063272	Not Available	1516	Open in IMG/M
3300022407\|Ga0181351_1240963	Not Available	571	Open in IMG/M
3300022543\|Ga0212119_1000272	Not Available	21715	Open in IMG/M
3300024862\|Ga0256317_1088600	Not Available	680	Open in IMG/M
3300024863\|Ga0255246_1005884	Not Available	2386	Open in IMG/M
3300027689\|Ga0209551_1104781	Not Available	911	Open in IMG/M
3300027693\|Ga0209704_1025266	All Organisms → Viruses → Predicted Viral	1541	Open in IMG/M
3300027693\|Ga0209704_1145054	Not Available	686	Open in IMG/M
3300027693\|Ga0209704_1190851	Not Available	597	Open in IMG/M
3300027743\|Ga0209593_10135010	Not Available	892	Open in IMG/M
3300027804\|Ga0209358_10523989	Not Available	535	Open in IMG/M
3300027900\|Ga0209253_10228609	Not Available	1473	Open in IMG/M
(restricted) 3300028571\|Ga0247844_1134992	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300031539\|Ga0307380_10618792	Not Available	928	Open in IMG/M
3300031539\|Ga0307380_11423116	Not Available	521	Open in IMG/M
3300031673\|Ga0307377_10333953	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300031758\|Ga0315907_10049581	Not Available	3700	Open in IMG/M
3300031758\|Ga0315907_10471819	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Dysgonomonadaceae → Dysgonomonas → unclassified Dysgonomonas → Dysgonomonas sp. 521	998	Open in IMG/M
3300031758\|Ga0315907_10707019	Not Available	765	Open in IMG/M
3300031758\|Ga0315907_10714105	Not Available	760	Open in IMG/M
3300031758\|Ga0315907_10984518	Not Available	610	Open in IMG/M
3300031787\|Ga0315900_10033763	Not Available	5637	Open in IMG/M
3300032050\|Ga0315906_10082831	All Organisms → Viruses → Predicted Viral	3231	Open in IMG/M
3300032093\|Ga0315902_10014540	Not Available	10110	Open in IMG/M
3300032116\|Ga0315903_10285106	Not Available	1405	Open in IMG/M
3300033978\|Ga0334977_0475689	Not Available	572	Open in IMG/M
3300033995\|Ga0335003_0042260	Not Available	2457	Open in IMG/M
3300034061\|Ga0334987_0082998	Not Available	2521	Open in IMG/M
3300034073\|Ga0310130_0000906	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	18270	Open in IMG/M
3300034104\|Ga0335031_0000802	Not Available	24300	Open in IMG/M
3300034104\|Ga0335031_0546305	Not Available	695	Open in IMG/M
3300034120\|Ga0335056_0411606	Not Available	727	Open in IMG/M
3300034272\|Ga0335049_0002369	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13725	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.40%
Terrestrial	Environmental → Terrestrial	3.60%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	81.98%
Marine	Environmental → Aquatic → Marine	11.71%
Soil	Environmental → Terrestrial → Soil	2.70%
Sediment	Environmental → Aquatic → Sediment	1.80%
Unclassified	Environmental → Aquatic → Unclassified	0.90%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.90%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	31.53%
Lake	Environmental → Aquatic → Freshwater → Lake	24.32%
Sediment	Environmental → Aquatic → Freshwater → Sediment	13.51%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	9.91%
Coastal	Environmental → Aquatic → Marine → Coastal	5.41%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.50%
Clay	Environmental → Terrestrial → Soil → Clay	2.70%
River	Environmental → Aquatic → Freshwater → River	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.90%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.90%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	26.13%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	24.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	13.51%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.41%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.90%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.90%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.90%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	23.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	13.51%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.91%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	9.01%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	8.11%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.50%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.50%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.70%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.70%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.80%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.90%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.90%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.90%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.90%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.90%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.90%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002296	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003499	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005826	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.186_BBA	Environmental	Open in IMG/M
3300005828	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.182_BBI	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300008106	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-53-LTR	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009474	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 3m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300011183	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - JTO22cm metaG	Environmental	Open in IMG/M
3300011339	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Hannam	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017788	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L	Environmental	Open in IMG/M
3300019122	Metatranscriptome of marine microbial communities from Baltic Sea - GS677_0p1	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020539	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020574	Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022543	Indian_combined assembly	Environmental	Open in IMG/M
3300024862	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024863	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300028571 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch201714.5m_1	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29587_10004062	3300002296	Freshwater	MLYEMMTATEYGVLRGFSEKSTRVHQIIRSGVNPPEWVHPPRKLGNQWVVFVSTEWIENGRGNN*
B570J29032_1088336282	3300002408	Freshwater	MMSATEYGILKGFSEKSTRVHQIIRSGNFPAEWVQAPKKIGNQWIVFVDLNWIKDASIR*
B570J29032_1092802603	3300002408	Freshwater	YEMMTATEYGVLRGFSEKSTRVHQIIRSGVNPPEWVHPPRKLGNQWVVFVSTEWIENGRGNN*
B570J40625_10003031714	3300002835	Freshwater	MLYEMMTATEYGVLRGFSEKSTRVHQIIRSGINPPEWVHPPRKLGNQWVVFVSTEWINNGRG*
B570J40625_1000996469	3300002835	Freshwater	MLYEMMSATEYGILKGFSEKSTRVHQIIRSGNFPAEWVQAPKKIGNQWIVFVDLNWIKDASIR*
JGI25930J51415_10363253	3300003499	Freshwater Lake	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWIKDGRGSN*
Ga0063232_100118043	3300004054	Freshwater Lake	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSSTWIGNGRGNN
Ga0066177_100098294	3300004096	Freshwater Lake	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSSTWIGNGRGNN*
Ga0065166_100587612	3300004112	Freshwater Lake	MFYEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWVVFVDPNWIKDGRG*
Ga0007787_106356202	3300004240	Freshwater Lake	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWVVFVDPN
Ga0078894_100040301	3300005662	Freshwater Lake	MFYEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWTHPPKKIGNQWVVFVDPNWIKDGRG*
Ga0078894_101208541	3300005662	Freshwater Lake	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWVVFVDPNWIKDGRG*
Ga0079957_101446311	3300005805	Lake	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQPPRKIGNQWIVFVDANWVKDASLR*
Ga0074477_14549726	3300005826	Sediment (Intertidal)	EMMSATEYGVLKGYSEKSTRVHQIIRSGNFPSEWVQAPKKIGNQWIVFVDSNWIKDVSIRK*
Ga0074475_106562092	3300005828	Sediment (Intertidal)	MLYEMMSATEYGVLKGYSEKSTRVHQIIRSGNFPSEWVQAPKKIGNQWIVFVDSNWIKDVSIRK*
Ga0070749_100109703	3300006802	Aqueous	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPEEWVQAPRKIGNQWIVFVDANWVKNVSR*
Ga0070749_100612082	3300006802	Aqueous	MLYEMMTATEYGVLRGFSEKSTRVHQIIRSGINPPEWVYPPKKIGNQWVVFVSTEWIENGRG*
Ga0070749_105543472	3300006802	Aqueous	MMSATEYGVLKGFSEKSTRVHQIIRSGNFPAEWVQAPKKIGNQWIVFVDLNWIKDASVR*
Ga0099851_11992322	3300007538	Aqueous	MLYEMMSATEYGVLKGYSEKSTRVHQIIRSGINPPEWVYPPKKIGNQWVVFVSTEWIENGRG*
Ga0105747_13278971	3300007974	Estuary Water	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWIKDGRG*
Ga0114339_12120932	3300008106	Freshwater, Plankton	MMSATEYGVLKGYSEKSTRVHQIIRSGVFPPEWVQAPKKIGNQWIVFVSTKWIQDGRG*
Ga0114340_10376976	3300008107	Freshwater, Plankton	MLYEMMSATEYGVLKGYSEKSTRVHQIIRSGVFPAEWVQAPKKIGNQWIVFVSTKWIQDGRG*
Ga0114341_100389113	3300008108	Freshwater, Plankton	MSATEYGVLKGYSEKSTRVHQIIRSGVWPKEFALPPRKIGNQWIVFIDVTWIPDGRG*
Ga0114350_100127910	3300008116	Freshwater, Plankton	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPSEWVQAPKKIGNQWIVFVDVNWIRDGR*
Ga0114355_100549611	3300008120	Freshwater, Plankton	MFYEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWVVFVDPNWIKDGR*
Ga0114363_10104119	3300008266	Freshwater, Plankton	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWIKDGRG*
Ga0114363_11436314	3300008266	Freshwater, Plankton	MLYEMMSATEYGVLKGYSEKSTRVHQIIRSGVFPPEWVQAPKKIGNQWIVFVSTKWIQDGRG*
Ga0114363_11981881	3300008266	Freshwater, Plankton	MFCEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPSEWVQPPRKIGNQWIVFVDANWVKDASLR*
Ga0114363_11984024	3300008266	Freshwater, Plankton	MFCEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQPPRKIGNQWIVFVDANWVKDASLR*
Ga0114363_12269773	3300008266	Freshwater, Plankton	GKKMFCEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQPPRKIGNQWIVFVDANWVKDASLR*
Ga0114876_10003838	3300008448	Freshwater Lake	MFYEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWTHPPKKIGNQWVVFVDPNWIKDGR*
Ga0114880_12657272	3300008450	Freshwater Lake	MLYEMMTATEYGVLKGYSEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSANWISNGRGNN*
Ga0102829_13098162	3300009026	Estuarine	MTATEYGVLRGFSEKSTRVHQIIRSGVHPPEWVHPPRKLGNQWIVFVSNEWIGNGRG*
Ga0105093_102485362	3300009037	Freshwater Sediment	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWINNGRGNH*
Ga0105098_101588762	3300009081	Freshwater Sediment	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSSTWIGNGRRNH*
Ga0105103_100026415	3300009085	Freshwater Sediment	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSSTWIGNGRG*
Ga0105103_106593641	3300009085	Freshwater Sediment	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNW
Ga0114918_104787762	3300009149	Deep Subsurface	MLYEMMSATEYGVLKGYSEKSTRVHQIIRSGVFPPEFALPPKKIGNQWVLFIDFDWIKNVRIRK*
Ga0105102_100060405	3300009165	Freshwater Sediment	MMSATEYGVLKGYSEKSTRVHQIIRSGVFPSEWTQAPKKIGNQWIVFVSKEWIENGRA*
Ga0105102_100213854	3300009165	Freshwater Sediment	MMTATEYGVLRGFSEKSTRVHQIIRSGVNPPEWVHPPRKLGNQWVVFVSTEWIKNGRGNN
Ga0105102_100450762	3300009165	Freshwater Sediment	MMSATEYGVLKGYSEKSTRVHQIIRSGVFPQEWVYPPKKIGNQWVVFVSLTWIKDGRRENL*
Ga0105102_101921432	3300009165	Freshwater Sediment	MLYEMMTATEYGVLRGFSEKSTRVHQIIRSGIHPAEWVHPPRKLGNQWVVFVNTNWINNGRGENL*
Ga0105097_104682952	3300009169	Freshwater Sediment	MMSATEYGVLKGFSEKSTRVHQIIRSGVWPEEWVYPPKKIGNQWVVFVNLTWIKDGRGKNL*
Ga0105097_105606314	3300009169	Freshwater Sediment	PMLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSSTWIGNGRGNN*
Ga0105097_106772012	3300009169	Freshwater Sediment	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSSTWIGDGRG*
Ga0127390_10211275	3300009474	Meromictic Pond	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPQKVGNLWVLFVSQEWINNAREKN
Ga0129333_109357452	3300010354	Freshwater To Marine Saline Gradient	MMTATEYGVLRGFSEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWINNGRGKN
Ga0136713_10045873	3300011183	Freshwater	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPSEWVQAPKKIGNQWIVFVDPNWIRDGRG*
Ga0153700_1020120	3300011339	Freshwater	MMSAQEYGVLKGYSEKSTRVHQIIRSGKYPEEWVQAPRKIGNQWIVFVDANWVKNVSR*
Ga0164293_101958964	3300013004	Freshwater	MTATEYGVLRGFSEKSTRVHQIIRSGVNPPEWVHPPRKLGNQWVVFVSTEW
Ga0164292_101147725	3300013005	Freshwater	MMTATEYGVLRGFSEKSTRVHQIIRSGVHPPEWVYPPRKLGNQWVVFVSTEWIENGRGNN
Ga0177922_103613713	3300013372	Freshwater	TIMLYEYEMMTATEYGVLRGFSEKSTRVHQIIRSGVHPPEWVHPPRKLGNQWIVFVSNEWIGNGRG*
Ga0181363_10028733	3300017707	Freshwater Lake	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWINNGRGSN
Ga0181363_10049755	3300017707	Freshwater Lake	MFYEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWTHPPKKIGNQWVVFVDPNWIKDGRG
Ga0181363_10198633	3300017707	Freshwater Lake	MMTATKYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWINNGRGKN
Ga0181363_10476883	3300017707	Freshwater Lake	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWIKDGRRSN
Ga0181365_10376612	3300017736	Freshwater Lake	MMTATEYGVLRGFTEKSTRVHQIIRSGVHPPEWVHPPRKLGNQWVVFVSNDWINNGRGHN
Ga0181352_11334782	3300017747	Freshwater Lake	MLYEMMSATEYGILKGFSEKSTRVHQIIRSGNFPAEWVQAPKKIGNQWIVFVDLNWIKDVSVR
Ga0181344_11897252	3300017754	Freshwater Lake	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWTHPPKKIGNQWVVFVDPNWIKDGRG
Ga0181356_10845122	3300017761	Freshwater Lake	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVHPPEWVHPPRKLGNQWVVFVSNDWIENGRGHNK
Ga0181358_10567162	3300017774	Freshwater Lake	MMTATEYGVLRGFSEKSTRVHQIIRSGVHPPEWVHPPRKLGNQWVVFVSNDWIENGRGHN
Ga0181348_11296252	3300017784	Freshwater Lake	MMTATEYGVLRGFSEKSTRVHQIIRSGVHPPEWVHPPRKLGNQWVVFVSNEWINNGRGHN
Ga0181355_11013383	3300017785	Freshwater Lake	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWLYPPKRLGNQWVLFVSTNWIKDGRGSN
Ga0169931_1000842232	3300017788	Freshwater	MLYEMMSATEYGVLKGYSEKSTRVHQIIRSGKFPSEWVQAPKKIGNQWIVFVDANWIKDVSR
Ga0188839_10019343	3300019122	Freshwater Lake	MMSATEYGVLKGYSEKSTRVHQIIRSGVWPKEFALPPRKIGNQWIVFIDVTWIPNGRG
Ga0181359_10252683	3300019784	Freshwater Lake	MMTATEYGVLRGFSEKSTRVHQIIRSGVHPPEWVHPPRKLGNQWIVFVSNEWIGNGRG
Ga0181359_10509643	3300019784	Freshwater Lake	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWIKDGRGSN
Ga0211736_106626363	3300020151	Freshwater	MLYEMMSATEYGVLKGFSEKSTRVHQIIRSGNFPAEWVQAPKKIGNQWIVFVDL
Ga0211733_107670602	3300020160	Freshwater	MMSATEYGVLKGYSEKSTRVHQIIRSGVFPPEWVQAPKKIGNQWVVFVDPNWIKDGR
Ga0208232_10173272	3300020527	Freshwater	MLYEMMTATEYGVLRGFSEKSTRVHQIIRSGVNPPEWVHPPRKLGNQWVVFVSTEWI
Ga0207941_10430042	3300020539	Freshwater	MLYEMMSATEYGILKGFSEKSTRVHQIIRSGNFPAEWVQAPKKIGNQWIVFVDLNWIKDASIR
Ga0208221_10582162	3300020574	Freshwater	MMTATEYGVLRGFSEKSTRVHQIIRSGVNPPEWVHPPRKLGNQWVVFVSTEWIENGRGNN
Ga0222714_1000729615	3300021961	Estuarine Water	MMSATEYGVLKGYSEKSTRVHQIIRSGIFPAEWVQAPKKIGNQWIVFVDLNWIKNGRG
Ga0222714_101098654	3300021961	Estuarine Water	MFCEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQPPRKIGNQWIVFVDANWVKDASLR
Ga0222714_102464312	3300021961	Estuarine Water	MLYEMMTATEYGVLRGFSEKSTRVHQIIRSGINPPEWVYPPKKIGNQWVVFVSTEWIENGRG
Ga0222714_106350392	3300021961	Estuarine Water	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPEEWVQAPRKIGNQWIVFVDANWVKNVSR
Ga0222713_105052162	3300021962	Estuarine Water	MFCEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQPPRKIGNQWIVFVDANWVKDVSLR
Ga0181353_10074866	3300022179	Freshwater Lake	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWIKDGRRSN
Ga0181351_10632724	3300022407	Freshwater Lake	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWVVFVDPNWIKDGRG
Ga0181351_12409633	3300022407	Freshwater Lake	GVLRGFSEKSTRVHQIIRSGVNPPEWVHPPRKLGNQWVVFVSTEWIQNGRGNN
Ga0212119_10002722	3300022543	Freshwater	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPSEWVQAPKKIGNQWIVFVDPNWIRDGRG
Ga0256317_10886002	3300024862	Freshwater	MMSATEYGILKGFSEKSTRVHQIIRSGNFPAEWVQAPKKIGNQWIVFVDLNWIKDAGIR
Ga0255246_10058842	3300024863	Freshwater	MLYEMMSATEYGILKGFSEKSTRVHQIIRSGNFPAEWVQAPKKIGNQWIVFVDLNWIKDAGIR
Ga0209551_11047813	3300027689	Freshwater Lake	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSSTWIGNGRGNN
Ga0209704_10252662	3300027693	Freshwater Sediment	MMSATEYGVLKGYSEKSTRVHQIIRSGVFPQEWVYPPKKIGNQWVVFVSLTWIKDGRREN
Ga0209704_11450542	3300027693	Freshwater Sediment	MLYEMMTATEYGVLRGFSEKSTRVHQIIRSGVNPPEWVHPPRKLGNQWVVFVSTEWIKNGRGNN
Ga0209704_11908512	3300027693	Freshwater Sediment	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWINNGRGKN
Ga0209593_101350103	3300027743	Freshwater Sediment	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSSTWIGNGRG
Ga0209358_105239891	3300027804	Freshwater Lake	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWVVFVDPNW
Ga0209253_102286093	3300027900	Freshwater Lake Sediment	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWINNGRGKN
(restricted) Ga0247844_11349921	3300028571	Freshwater	MLYEMMSATEYGVLKGYSEKSTRVHQIIRSGVFPAEWVQAPKKIGNQWIVFVDFDWIKNVRVRQ
Ga0307380_106187922	3300031539	Soil	MMSATEYGVLKGYSEKSTRVHQIIRSGNFPSEWVQAPKKIGNQWIVFVDFDWIKNVRIRK
Ga0307380_114231162	3300031539	Soil	MMSATEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWIVFVDFDWIKNVRIRK
Ga0307377_103339533	3300031673	Soil	MLYEMMSATEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWIVFVDFDWIKNVRIRK
Ga0315907_100495815	3300031758	Freshwater	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQPPRKIGNQWIVFVDANWVKDASLR
Ga0315907_104718192	3300031758	Freshwater	MFYEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWVVFVDPNWIKDG
Ga0315907_107070192	3300031758	Freshwater	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPSEWVQAPKKIGNQWIVFVDVNWIRDGR
Ga0315907_107141052	3300031758	Freshwater	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPSEWVQAPKKIGNQWVVFVDVNWIRDGRG
Ga0315907_109845182	3300031758	Freshwater	MLYEMMTATEYGVLKGYSEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSANWISNGRGNN
Ga0315900_100337635	3300031787	Freshwater	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWIKDGRG
Ga0315906_1008283112	3300032050	Freshwater	KMFCEMMSAQEYGVLKGYSEKSTRVHQIIRSGKFPSEWVQPPRKIGNQWIVFVDANWVKDASLR
Ga0315902_100145407	3300032093	Freshwater	MMSAQEYGVLKGYSEKSTRVHQIIRSGKFPAEWVQAPKKIGNQWVVFVDPNWIKDGR
Ga0315903_102851065	3300032116	Freshwater	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTN
Ga0334977_0475689_89_277	3300033978	Freshwater	MLYEMMTATEYGVLRGFSEKSTRVHQIIRSGINPPEWVHPPRKLGNQWVVFVSTEWINNGRG
Ga0335003_0042260_2163_2357	3300033995	Freshwater	MLYEMMTATEYGVLRGFSEKSTRVHQIIRSGVHPPEWVYPPRKLGNQWVVFVSTEWIENGRGNN
Ga0334987_0082998_2329_2505	3300034061	Freshwater	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWINNGRG
Ga0310130_0000906_6224_6412	3300034073	Fracking Water	MLYEMMSATDYGVLKGYSEKSTRVHQIIRSGVFPAEWVQAPKKIGNQWIVFVDTNWIKDVSR
Ga0335031_0000802_19657_19839	3300034104	Freshwater	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPRKLGNQWVVFVSSTWIGNGRGSL
Ga0335031_0546305_191_367	3300034104	Freshwater	MMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWIKDGRG
Ga0335056_0411606_572_727	3300034120	Freshwater	MLYEMMTATEYGVLRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFV
Ga0335049_0002369_740_922	3300034272	Freshwater	MMTATEYGILRGFTEKSTRVHQIIRSGVWPEEWVYPPKRLGNQWVLFVSTNWINNGRGKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters