Metagenome Family F085363

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085363
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	57 residues
Representative Sequence	MKPAKGTKKASARKAPKTNLNVNVEYVEQIADESIATIMALRALVRQLATELEEARK
Number of Associated Samples	51
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	9.91 %
% of genes from short scaffolds (< 2000 bps)	65.77 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (88.288 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (53.153 % of family members)
Environment Ontology (ENVO)	Unclassified (72.973 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (59.459 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.82% β-sheet: 0.00% Coil/Unstructured: 61.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03796	DnaB_C	13.51
PF11645	PDDEXK_5	12.61
PF00772	DnaB	4.50
PF12705	PDDEXK_1	2.70
PF00535	Glycos_transf_2	0.90
PF13392	HNH_3	0.90
PF12728	HTH_17	0.90
PF14279	HNH_5	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	18.02
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	13.51

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
All Organisms	root	All Organisms	11.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
cellular organisms	root	All Organisms → cellular organisms	9.01 %
Viruses	superkingdom	All Organisms → Viruses	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.01 %
unclassified bacterial viruses	clade	All Organisms → Viruses → unclassified bacterial viruses	1.80 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	5.41 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1.80 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	5.41 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1.80 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.90 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.90 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	5.41 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	5.41 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1.80 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.90 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.90 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.90 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	5.41 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1.80 %
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	0.90 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.90 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.90 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	5.41 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1.80 %
Lysobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter soli	0.90 %
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	0.90 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.90 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	5.41 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1.80 %
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	0.90 %
Lysobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter soli	0.90 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.90 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.29 %
Parcubacteria group bacterium ADurb.Bin216	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	5.41 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1.80 %
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	0.90 %
Lysobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter soli	0.90 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.90 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001533\|MLSed_10025304	Not Available	5294	Open in IMG/M
3300002203\|metazooDRAFT_1301302	Not Available	679	Open in IMG/M
3300002296\|B570J29587_1003261	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1318	Open in IMG/M
3300002298\|B570J29599_1012948	Not Available	509	Open in IMG/M
3300002408\|B570J29032_108797599	Not Available	512	Open in IMG/M
3300002408\|B570J29032_108846040	Not Available	523	Open in IMG/M
3300002408\|B570J29032_109374054	Not Available	721	Open in IMG/M
3300002408\|B570J29032_109907017	Not Available	2322	Open in IMG/M
3300002835\|B570J40625_100018718	Not Available	11858	Open in IMG/M
3300002835\|B570J40625_100093327	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	3773	Open in IMG/M
3300005805\|Ga0079957_1097092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter soli	1617	Open in IMG/M
3300006802\|Ga0070749_10692415	Not Available	545	Open in IMG/M
3300007216\|Ga0103961_1051204	Not Available	2815	Open in IMG/M
3300007216\|Ga0103961_1181612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	5947	Open in IMG/M
3300007216\|Ga0103961_1315044	Not Available	1433	Open in IMG/M
3300007541\|Ga0099848_1236589	Not Available	643	Open in IMG/M
3300009466\|Ga0126448_1034739	Not Available	1182	Open in IMG/M
3300009504\|Ga0114946_10387742	Not Available	725	Open in IMG/M
3300010354\|Ga0129333_10185189	Not Available	1898	Open in IMG/M
3300010354\|Ga0129333_10514302	Not Available	1048	Open in IMG/M
3300010354\|Ga0129333_10977890	Not Available	712	Open in IMG/M
3300010354\|Ga0129333_11272596	Not Available	609	Open in IMG/M
3300010354\|Ga0129333_11775542	Not Available	500	Open in IMG/M
3300010370\|Ga0129336_10083747	Not Available	1880	Open in IMG/M
3300012000\|Ga0119951_1110336	Not Available	644	Open in IMG/M
3300019784\|Ga0181359_1224829	Not Available	587	Open in IMG/M
3300020498\|Ga0208050_1001445	Not Available	3361	Open in IMG/M
3300020527\|Ga0208232_1020122	Not Available	960	Open in IMG/M
3300020530\|Ga0208235_1014644	Not Available	981	Open in IMG/M
3300020533\|Ga0208364_1005750	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	2052	Open in IMG/M
3300020533\|Ga0208364_1016675	Not Available	1059	Open in IMG/M
3300020536\|Ga0207939_1004650	Not Available	2566	Open in IMG/M
3300020536\|Ga0207939_1009817	Not Available	1524	Open in IMG/M
3300020536\|Ga0207939_1047859	Not Available	524	Open in IMG/M
3300020549\|Ga0207942_1042939	Not Available	560	Open in IMG/M
3300020553\|Ga0208855_1006642	Not Available	2056	Open in IMG/M
3300020553\|Ga0208855_1022008	Not Available	934	Open in IMG/M
3300020554\|Ga0208599_1009743	Not Available	1642	Open in IMG/M
3300020554\|Ga0208599_1013540	Not Available	1365	Open in IMG/M
3300020557\|Ga0208231_1047130	Not Available	679	Open in IMG/M
3300020557\|Ga0208231_1069905	Not Available	522	Open in IMG/M
3300020571\|Ga0208723_1011509	Not Available	1495	Open in IMG/M
3300023174\|Ga0214921_10081818	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	2548	Open in IMG/M
3300025646\|Ga0208161_1111434	Not Available	738	Open in IMG/M
3300025646\|Ga0208161_1115939	Not Available	715	Open in IMG/M
3300027805\|Ga0209229_10006114	Not Available	5031	Open in IMG/M
3300029933\|Ga0119945_1027058	Not Available	663	Open in IMG/M
3300031787\|Ga0315900_10269379	Not Available	1438	Open in IMG/M
3300033816\|Ga0334980_0012411	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3690	Open in IMG/M
3300033816\|Ga0334980_0055634	Not Available	1669	Open in IMG/M
3300033816\|Ga0334980_0077706	Not Available	1388	Open in IMG/M
3300033981\|Ga0334982_0021275	Not Available	3774	Open in IMG/M
3300033981\|Ga0334982_0045755	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	2437	Open in IMG/M
3300033981\|Ga0334982_0054782	Not Available	2194	Open in IMG/M
3300033981\|Ga0334982_0056829	Not Available	2147	Open in IMG/M
3300033981\|Ga0334982_0057980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	2122	Open in IMG/M
3300033981\|Ga0334982_0138134	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	1251	Open in IMG/M
3300033981\|Ga0334982_0144564	Not Available	1216	Open in IMG/M
3300033981\|Ga0334982_0416699	Not Available	608	Open in IMG/M
3300033993\|Ga0334994_0180129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin216	1161	Open in IMG/M
3300033993\|Ga0334994_0225644	Not Available	996	Open in IMG/M
3300033993\|Ga0334994_0291822	Not Available	833	Open in IMG/M
3300033993\|Ga0334994_0385324	Not Available	682	Open in IMG/M
3300033993\|Ga0334994_0512773	Not Available	554	Open in IMG/M
3300033993\|Ga0334994_0560862	Not Available	519	Open in IMG/M
3300033993\|Ga0334994_0579234	Not Available	507	Open in IMG/M
3300033996\|Ga0334979_0689996	Not Available	534	Open in IMG/M
3300033997\|Ga0310131_085759	Not Available	578	Open in IMG/M
3300034012\|Ga0334986_0276751	Not Available	900	Open in IMG/M
3300034061\|Ga0334987_0211389	Not Available	1355	Open in IMG/M
3300034062\|Ga0334995_0010326	Not Available	8806	Open in IMG/M
3300034062\|Ga0334995_0018309	All Organisms → cellular organisms → Bacteria	6307	Open in IMG/M
3300034062\|Ga0334995_0112204	Not Available	2041	Open in IMG/M
3300034062\|Ga0334995_0272492	Not Available	1125	Open in IMG/M
3300034062\|Ga0334995_0321748	Not Available	1003	Open in IMG/M
3300034062\|Ga0334995_0498315	Not Available	733	Open in IMG/M
3300034063\|Ga0335000_0001042	Not Available	23947	Open in IMG/M
3300034063\|Ga0335000_0466685	Not Available	736	Open in IMG/M
3300034072\|Ga0310127_012492	Not Available	5900	Open in IMG/M
3300034073\|Ga0310130_0026200	Not Available	1823	Open in IMG/M
3300034092\|Ga0335010_0048050	Not Available	3094	Open in IMG/M
3300034092\|Ga0335010_0680919	Not Available	509	Open in IMG/M
3300034096\|Ga0335025_0261521	Not Available	943	Open in IMG/M
3300034101\|Ga0335027_0046722	Not Available	3527	Open in IMG/M
3300034101\|Ga0335027_0066049	Not Available	2863	Open in IMG/M
3300034101\|Ga0335027_0115429	Not Available	2023	Open in IMG/M
3300034101\|Ga0335027_0140343	Not Available	1787	Open in IMG/M
3300034101\|Ga0335027_0230694	Not Available	1293	Open in IMG/M
3300034101\|Ga0335027_0231662	Not Available	1289	Open in IMG/M
3300034101\|Ga0335027_0345360	Not Available	986	Open in IMG/M
3300034101\|Ga0335027_0500086	Not Available	763	Open in IMG/M
3300034101\|Ga0335027_0529382	Not Available	732	Open in IMG/M
3300034104\|Ga0335031_0009789	Not Available	7075	Open in IMG/M
3300034104\|Ga0335031_0094087	Not Available	2119	Open in IMG/M
3300034104\|Ga0335031_0178967	Not Available	1449	Open in IMG/M
3300034104\|Ga0335031_0199450	Not Available	1356	Open in IMG/M
3300034106\|Ga0335036_0018886	Not Available	5568	Open in IMG/M
3300034106\|Ga0335036_0051161	Not Available	3159	Open in IMG/M
3300034106\|Ga0335036_0054188	Not Available	3057	Open in IMG/M
3300034106\|Ga0335036_0089573	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	2276	Open in IMG/M
3300034106\|Ga0335036_0105157	Not Available	2066	Open in IMG/M
3300034106\|Ga0335036_0134165	Not Available	1779	Open in IMG/M
3300034106\|Ga0335036_0269310	Not Available	1145	Open in IMG/M
3300034106\|Ga0335036_0593965	Not Available	673	Open in IMG/M
3300034112\|Ga0335066_0070490	Not Available	2272	Open in IMG/M
3300034112\|Ga0335066_0197714	Not Available	1194	Open in IMG/M
3300034118\|Ga0335053_0673273	Not Available	586	Open in IMG/M
3300034120\|Ga0335056_0019932	Not Available	4653	Open in IMG/M
3300034120\|Ga0335056_0184265	Not Available	1216	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.30%
Terrestrial	Environmental → Terrestrial	2.70%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	85.59%
Marine	Environmental → Aquatic → Marine	10.81%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.70%
Unclassified	Environmental → Aquatic → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	57.66%
Lentic	Environmental → Aquatic → Freshwater → Lentic	24.32%
Coastal	Environmental → Aquatic → Marine → Coastal	10.81%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.90%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	57.66%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	12.61%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	11.71%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.81%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	53.15%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	10.81%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	10.81%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.41%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.41%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.70%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.90%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.90%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.90%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.90%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.90%
Benthic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Benthic	0.90%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001533	Benthic freshwater microbial communities from British Columbia, Canada	Environmental	Open in IMG/M
3300002203	Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAR 2013	Environmental	Open in IMG/M
3300002296	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002298	Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007216	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface and Bottom layer) 16 sequencing projects	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300009466	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020530	Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020533	Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020553	Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020557	Freshwater microbial communities from Lake Mendota, WI - 15JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020571	Freshwater microbial communities from Lake Mendota, WI - 31AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300029933	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300033997	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-FT7-sol	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MLSed_100253042	3300001533	Benthic	MSYTPIHNSPISMKKPKTTKKAAAVKPEQANINVEYVEQIADESIATIMALRSLVRLLADELKEARK*
metazooDRAFT_13013023	3300002203	Lake	MKTKKASKKASAPKAPKTQPLNVNLDYVCEIADESIATLMALRALVIRLSDELREARK*
B570J29587_10032615	3300002296	Freshwater	PKKAAAVKPKPANINVEYVEQIADESIATIMALRSLVRLLADELKEARK*
B570J29599_10129481	3300002298	Freshwater	MKTAKGTKKASAPKAPKTNLNINVEYVEQIADESIATIMALRALVRQLATELEEARSK*
B570J29032_1087975991	3300002408	Freshwater	MKPAKSTKKASAAKAPKTNLNVNVEYVEQIADESIATIMALRALVRQLATELEEARK*
B570J29032_1088460402	3300002408	Freshwater	MKKPKTTKKAAAVQPKTANIDVEYVEQIADESIATIMALRSLVRLLADEL
B570J29032_1093740542	3300002408	Freshwater	MKTAKGTKKKASAPKAPKTVYNVNVEYVEAIADESIATIMALRALVRKLATELQEARK*
B570J29032_1099070171	3300002408	Freshwater	MKKPKTTKKAAAVKPKPANINVEYVEQIADESIATIMALRSLVRLLADEL
B570J40625_10001871821	3300002835	Freshwater	MKKPKTTKKAAAVKPKPANINVEYVEQIADESIATIMALRSLVRLLADELKEARK*
B570J40625_1000933275	3300002835	Freshwater	MKKPKTTKKAAAVQPKTANIDVEYVEQIADESIATIMALRSLVRLLADELKEARK*
Ga0079957_10970922	3300005805	Lake	MKPAKRTKKAAAVKPKTNLQVNLEYVEQIADEAIATVMVLRALVRQLAEKLEEQK*
Ga0070749_106924152	3300006802	Aqueous	MKPAKKTTKKAAAVKPKTRTLNVNIDAVFEMADESIATIMALRALVATLANELEEARK*
Ga0103961_10512044	3300007216	Freshwater Lake	MKTAKGTKKKAAAVKPKTTNLNVNMEYVEQIADESIATLMALRSLVRMLVQELEDRK*
Ga0103961_11816123	3300007216	Freshwater Lake	MKTRKKNTKKVAKAPAKAKNRHFNVNVEYVEQIADESIATIMALRSLVRQLADQLEGRK*
Ga0103961_13150445	3300007216	Freshwater Lake	MKTRKKTTKKVAKAPAEAKTANLNVNVDYVEQIADESIATIMALRGLVRMLATELEARK*
Ga0099848_10480083	3300007541	Aqueous	MKPAKGTKKKASARKAPKTTVTANLDYVNQIADEAIATIMALRAVIATLADEKEARK*
Ga0099848_12365892	3300007541	Aqueous	MNTFMKPAKSTKKKASAKAPKTTLNVNVDYVCELADESIATIMALRALVVTLANERKEARK*
Ga0099846_11084193	3300007542	Aqueous	MKPAKGTKKKASVRKAPKTTVTANLDYVNQIADEAIATIMALRAVIATLADEKEARK*
Ga0126448_10347391	3300009466	Meromictic Pond	MKTAKGTKKKASARKAPKTNYLNVNVAYVQEIADEAIATIMALRALVEQLAAEKEGRK*
Ga0114946_103877421	3300009504	Sediment	MKTAKKTTKKAAAVKPKARNYNVNLEYVNKIADESIATIMALRGLINQ
Ga0129333_101851892	3300010354	Freshwater To Marine Saline Gradient	MKPAKRTKKASAAKAPKTSNLNVNVEYLEQIADESIATIMALRALVRQLAIELEEARK*
Ga0129333_105143022	3300010354	Freshwater To Marine Saline Gradient	MKPAKSTKKASARKAPKAANLQVNVEYLEQIADEAIATIMAMRALIGQLAAQQEDRDAR*
Ga0129333_109778901	3300010354	Freshwater To Marine Saline Gradient	MKTAKSTKKKAAAVKPKTSNLNVNVEYLEQIADEAISTIMVLRALVAQLAMKLEDNK*
Ga0129333_112725962	3300010354	Freshwater To Marine Saline Gradient	MKTAKRTKKKASVLKAPKTNLNVNVEYLEQIADEAIATVMALRALVVQLANQLEDRDAR*
Ga0129333_117755421	3300010354	Freshwater To Marine Saline Gradient	MKTAKGTKKASARKAPKTNLQVNLEYVEQIADESIATIMALRALVRQLAMKLEDNK*
Ga0129336_100837473	3300010370	Freshwater To Marine Saline Gradient	MKPAKGTKKASARKAPKTNLQVNIEYVEQIADESIATIMALRALVRQLAIELEEARK*
Ga0119951_11103362	3300012000	Freshwater	MKPAKSTKKASVRKAPKTNIRVNVEYVEQIADEAIATIMALRALVRQLATKLQERNAR*
Ga0181359_12248293	3300019784	Freshwater Lake	MKTAKSTKKKASALKAPKTNLNVNVEYVEQIADESIATIMALRALVRQLATELREARK
Ga0208050_10014451	3300020498	Freshwater	MKTAKSTKKASAPKAPKATTLNINVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0208232_10201222	3300020527	Freshwater	MKKPKTTKKAAAVKPKPANINVEYVEQIADESIATIMALRSLVRLLADELKEARK
Ga0208235_10146441	3300020530	Freshwater	MKTAKGTKKKASAPKAPKTVYNVNVEYVEAIADESIATIMALRALVRQLATELEEARK
Ga0208364_10057506	3300020533	Freshwater	MKPAKGTKKKASAANAPKTSNLNVNVEYLEQIADEAISTVMVLRALVAQLAIQLEEARK
Ga0208364_10166752	3300020533	Freshwater	MKTAKGTKKASAPKAPKTNLNINVEYVEQIADESIATIMALRALVRQLATELEEARSK
Ga0207939_10046501	3300020536	Freshwater	MKKPKTTKKAAAVKPKPANINVEYVEQIADESIATIMALRSLVRLL
Ga0207939_10098171	3300020536	Freshwater	MKKPKTTKKAAAVQPKTANIDVEYVEQIADESIATIMALRSLVRLL
Ga0207939_10478591	3300020536	Freshwater	MKPAKKTTKTASARKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAMSQEDRDAR
Ga0207942_10429391	3300020549	Freshwater	APKAPKTVYNVNVEYVEAIADESIATIMALRALVRKLATELQEARK
Ga0208855_10066423	3300020553	Freshwater	MKPAKSTKKASAPKAPKTNLNINVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0208855_10220083	3300020553	Freshwater	MKTAKGTKKKASAPKAPKTVYNVNVEYVEAIADESIATIMALRALVRKLATELQEARK
Ga0208599_10097432	3300020554	Freshwater	MKPAKGTKKKASAPKAPKTVYNVNVEYVEAIADESIATIMALRALVRKLATELQEARK
Ga0208599_10135401	3300020554	Freshwater	MKKPKTTKKAAAVQPKTANIDVEYVEQIADESIATIMALRSLVRLLAD
Ga0208231_10471303	3300020557	Freshwater	MKTAKGTKKASAPKAPKTNLNINVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0208231_10699051	3300020557	Freshwater	MKPAKSTKKKASARKAPKTTLEVNVKYVEQLADEAMTNVMVLRALVRQLATQLEARK
Ga0208723_10115092	3300020571	Freshwater	MKTAKGTKKKASAPKAPKTNLNINVEYVEQIADESIATIMALRALVRQLATELEEARSK
Ga0214921_100818187	3300023174	Freshwater	MKPAKSTKKASAAKAPKTNLQVNVEYVNQVADEAISTIMALRALVGQLAMKIEEDGK
Ga0208161_11114341	3300025646	Aqueous	MNTFMKPAKSTKKKASAKAPKTTLNVNVDYVCELADESIATIMALRALVVTLANERKEAR
Ga0208161_11159393	3300025646	Aqueous	MKPAKKTTKKAAAVKPKTRTLNVNIDAVFEMADESIATIMALRALVATLANELEEARK
Ga0209229_100061143	3300027805	Freshwater And Sediment	MKPAKSTKKASAKAPKTNLQVNIEYVEQIADESIATIMVLRALVRQLAEKLEAQQ
Ga0119945_10270582	3300029933	Aquatic	MKPAKKPKKVAGRPAAKNTGLNVNVEYVEQIADESIATIMALRSLVRMLVAELEDRNAR
Ga0315900_102693792	3300031787	Freshwater	MKTAKSTKKASASKAPKANLNINVEYVEQIADESIATIMALRALVRQLATALEEARK
Ga0334980_0012411_3485_3667	3300033816	Freshwater	MKPAKSTKKKASARKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAMKQEENDAR
Ga0334980_0055634_533_712	3300033816	Freshwater	MKPAKGTKKKASARKAPKPSNLNVNVEYLEQIADEAISTVMVLRALVAQLAIQLEEARK
Ga0334980_0077706_767_949	3300033816	Freshwater	MKPAKKTTKTASAPKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAMKQEENDAR
Ga0334982_0021275_3290_3466	3300033981	Freshwater	MKPAKSTKKASAPKAPKTNLNINVEYVEQIADESIATIMALRALVRQLATELEEARSK
Ga0334982_0045755_1591_1767	3300033981	Freshwater	MKTAKGTKKKAAAVKPKTSNLNVNVEYLEQIADESIATIMALRALVRQLATELEEVRK
Ga0334982_0054782_1238_1414	3300033981	Freshwater	MKPAKSTKKKASAPKAPKTNLNVNVEYLEQIADEAISTVMVLRALVAQLAIQLEEARK
Ga0334982_0056829_1888_2064	3300033981	Freshwater	MKPAKGTKKKASAPKAPKTTLNVNVEYLEQIADESIATIMALRALVRQLAIELEEARK
Ga0334982_0057980_806_979	3300033981	Freshwater	MKPAKSTKKASARKAPKTNLEVNVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0334982_0138134_52_234	3300033981	Freshwater	MKPAKKTTKTASAPKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAISQEEKDAR
Ga0334982_0144564_275_448	3300033981	Freshwater	MKTAKGTKKASARKAPKTTLNINVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0334982_0416699_234_401	3300033981	Freshwater	MKPAKKTTKKAAAVKPKTNINVEYVEAIADESIATIMALRALVRQLAIELEEARK
Ga0334994_0180129_950_1123	3300033993	Freshwater	MKTAKTTKKASAPKAPKTNLNVNVEYLEQIADEAISTVMVLRALVAQLAIQLEEARK
Ga0334994_0225644_392_568	3300033993	Freshwater	MKTAKSTKKASARKAPKATTLNINIEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0334994_0291822_99_275	3300033993	Freshwater	MKSAKSTKKKASAPKAPKTNLNINVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0334994_0385324_299_475	3300033993	Freshwater	MKPAKGTKKKASARKAPKTNYLNVNVAYVQEIADEAVATIMALRALVEQLAAEKERRQ
Ga0334994_0512773_78_254	3300033993	Freshwater	MKPAKSTKKASAPKAPKTNLNINIEYVEQIADESIATIMALRALVRQLATELEEARSK
Ga0334994_0560862_82_261	3300033993	Freshwater	MKTAKSTKKASAPKAPKATTLNINVEYVEQIADESIATIMALRALVRQLATELEEARSK
Ga0334994_0579234_228_401	3300033993	Freshwater	MKTAKGTKKASAPKAPKTDLQVNIEYVEQIADESIATIMALRALVRKLATELQEARK
Ga0334979_0689996_164_343	3300033996	Freshwater	MKPAKSTKKKASAPKAPKTKLNVNVEYLEQIADEAISTIMVLRALVAQLAMSQEDRDAR
Ga0310131_085759_82_255	3300033997	Fracking Water	MKKQKTTKKAAAVKPKTRTLSVNIDAVFEMADESIATIMALRALVATLANELEEVQK
Ga0334986_0276751_126_302	3300034012	Freshwater	MKTAKGTKKKASAPKAPKTNLNINVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0334987_0211389_833_1009	3300034061	Freshwater	MKPAKGTKKKASAPKAPKTNLNVNVEYLEQIADESIATIMALRALVRQLAIELEEARK
Ga0334995_0010326_3375_3560	3300034062	Freshwater	MNPAKKTTKTASARKAPKAATNLQVNVEYLEQIADEAISTIMVLRALVAQLAISQEEKDA
Ga0334995_0018309_5865_6047	3300034062	Freshwater	MKPAKKTTKTASARKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAMSQEDRNAR
Ga0334995_0112204_16_189	3300034062	Freshwater	MKKPKTTKKAAAVKPKTTNLNVNVEYLEQIADEAISTVMVLRALVAQLAIQLEEARK
Ga0334995_0272492_927_1100	3300034062	Freshwater	MKPAKSTKKASARKAPKTTLNINVEYVEQIADESIATIMALRALVRQLANELEEARK
Ga0334995_0321748_18_194	3300034062	Freshwater	MKPAKSTKKASARKAPKTNLNINIEYVEQIADESIATIMALRALVRQLATELEEARSK
Ga0334995_0498315_519_692	3300034062	Freshwater	MKTAKSTKKASAPKAPKTNLNINIEYVEQIADESIATIMALRALVRQLATALEEARK
Ga0335000_0001042_5042_5215	3300034063	Freshwater	MKKPKTTKKAAAVKPKTSNLNVNVEYLEQIADEAISTVMVLRALVAQLAIQLEEARK
Ga0335000_0466685_158_340	3300034063	Freshwater	MKPAKKTTKTASARKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAMKQEENDAR
Ga0310127_012492_3051_3221	3300034072	Fracking Water	MKTKKTTSKAPAVKAKTQYLNVNVAYVQEIADEAIATIMALRALVEQLAAEKEKRQ
Ga0310130_0026200_1040_1213	3300034073	Fracking Water	MKKQKTTKKAPAVKAKTRTLNVNIDAVFEMADESMATIMALGALVATLANELEEDRK
Ga0335010_0048050_76_249	3300034092	Freshwater	MKPAKGTKKASARKAPKTNLNVNVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0335010_0680919_94_276	3300034092	Freshwater	MKPAKSTKKKASARKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAMSQEDRDAR
Ga0335025_0261521_199_372	3300034096	Freshwater	MKPAKSTKKASARKAPKTTFNVNVEYLEQIADESIATIMALRALVRQLATELEEVRK
Ga0335027_0046722_553_729	3300034101	Freshwater	MKTAKSTKKASAPKAPKATTLNINIEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0335027_0066049_124_300	3300034101	Freshwater	MKPAKGTKKKASARKAPKTNYLNVNVAYVQEIADEAVATIMALRALVEQLAAEKEARK
Ga0335027_0115429_322_498	3300034101	Freshwater	MKPAKSTKKKASAPKAPKTNLNVNVEYVEAIADESIATIMALRALVRQLANELEEARK
Ga0335027_0140343_184_351	3300034101	Freshwater	MKKPKTTKKAAAVKPKTTNVNVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0335027_0230694_219_395	3300034101	Freshwater	MKPAKGTKKKASARKAPKTNYLNVNVAYVQEIADEAVATIMALRALVEQLAAEKEGRK
Ga0335027_0231662_603_776	3300034101	Freshwater	MKTAKGTKKASAPKAPKTVYNVNVEYVEAIADESIATIMALRALVRKLATELQEARK
Ga0335027_0345360_673_846	3300034101	Freshwater	MKPAKSTKKASAPKAPKTNLNVNVEYLEQIADESIATIMALRALVRQLAIELEEARK
Ga0335027_0500086_7_189	3300034101	Freshwater	MKPAKKTTKTASARKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAMKQEEKDAR
Ga0335027_0529382_240_416	3300034101	Freshwater	MKPAQGTKKKASAPKAPKTNLNINIEYVEAIADESIATIMALRALVRQLATELEEARK
Ga0335031_0009789_5936_6112	3300034104	Freshwater	MKPAKGTKKASARKAPKATTLNVNVEYLEQIADESIATIMALRALVRQLAIELEEARK
Ga0335031_0094087_1814_1987	3300034104	Freshwater	MKPAKSTKKASARKAPKTTLNINVEYVEQIADESIATIMALRALVRQLATELQEARK
Ga0335031_0178967_835_1017	3300034104	Freshwater	MKTAKKTTKTASARKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAMKQEENDAR
Ga0335031_0199450_73_246	3300034104	Freshwater	MKPAKSTKKASARKAPKTNLNINVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0335036_0018886_477_650	3300034106	Freshwater	MKPAKSTKKASARKAPKTNYLNINVAYVQEIADEAVATIMALRALVEQLAAEKHKRQ
Ga0335036_0051161_318_491	3300034106	Freshwater	MKTGKSTKKASAPKAPKTVYNVNVEYVEAIADESIATIMALRALVRKLATELQEARK
Ga0335036_0054188_728_904	3300034106	Freshwater	MKTAKGTKKASARKAPKTTLNINVEYVEQIADESIATIMALRALVRQLATELEEARSK
Ga0335036_0089573_921_1097	3300034106	Freshwater	MKPAKGTKKKASAPKAPKTALNVNVEYLEQIADQAISTVMVLRALVAQLAIQLEEARK
Ga0335036_0105157_582_758	3300034106	Freshwater	MKPAKSTKKKASAPKAPKTTLNVNVEYVEAIADESIATIMALRALVRQLATELEEARK
Ga0335036_0134165_1575_1757	3300034106	Freshwater	MKTAKSTKKKASARKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAMKQEEKNAR
Ga0335036_0269310_372_557	3300034106	Freshwater	MYSISMKTKKTTKKAAAVKPKTNLNVNVEYLEQIADEAISTVMVLRALVAQLAIQLEEAR
Ga0335036_0593965_414_590	3300034106	Freshwater	MKPAKGTKKKASAPKAPKTTLNVNVEYLEQIADEAISTVMVLRALVAQLAIQLEEARK
Ga0335066_0070490_1_153	3300034112	Freshwater	KKAAAVKPKTSNLNVNVEYLEQIADESIATIMALRALVRQLATELEEVRK
Ga0335066_0197714_1_156	3300034112	Freshwater	KKKASAPKAPKTNLNVNVEYLEQIADEAISTVMVLRALVAQLAIQLEEARK
Ga0335053_0673273_2_157	3300034118	Freshwater	TKKASARKAPKTTLNINVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0335056_0019932_1485_1658	3300034120	Freshwater	MKPAKSTKKASARKAPKTNLQVNVEYVEQIADESIATIMALRALVRQLATELEEARK
Ga0335056_0184265_707_889	3300034120	Freshwater	MKPAKKTTKTASARKAPKATNLQVNVEYLEQIADEAISTIMVLRALVAQLAISQEEKDAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085363

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences