Metagenome / Metatranscriptome Family F085317

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085317
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	108 residues
Representative Sequence	MAPVNSKELSARMSKRLANFKLSDAVITGLADRVLIDGLSIARFDPCIYGICIDYFTDKLPRLDHLSPKHGIAKWEVFPYGIIDWDRFHVRIAFNVDELEGKGSLREFAH
Number of Associated Samples	89
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.78 %
% of genes near scaffold ends (potentially truncated)	31.53 %
% of genes from short scaffolds (< 2000 bps)	89.19 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.495 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.919 % of family members)
Environment Ontology (ENVO)	Unclassified (30.631 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.441 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.46% β-sheet: 23.19% Coil/Unstructured: 54.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF04055	Radical_SAM	32.43
PF13394	Fer4_14	3.60
PF01557	FAA_hydrolase	0.90
PF13620	CarboxypepD_reg	0.90
PF01494	FAD_binding_3	0.90
PF00392	GntR	0.90
PF00293	NUDIX	0.90
PF01734	Patatin	0.90
PF03551	PadR	0.90
PF01717	Meth_synt_2	0.90
PF00990	GGDEF	0.90
PF00400	WD40	0.90
PF13353	Fer4_12	0.90
PF02113	Peptidase_S13	0.90
PF02518	HATPase_c	0.90
PF00069	Pkinase	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.60
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.80
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.90
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.90
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.90
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.90
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.90
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.90
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.90
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.90
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.90
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.90

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.50 %
Unclassified	root	N/A	4.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.50 %
Unclassified	root	N/A	4.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.50 %
Unclassified	root	N/A	4.50 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.98 %
Unclassified	root	N/A	4.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	63.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.21 %
Unclassified	root	N/A	4.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.90 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	63.06 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.31 %
Unclassified	root	N/A	4.50 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.90 %

Name	Rank	Taxonomy	Distribution
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	63.06 %
Unclassified	root	N/A	4.50 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	3.60 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.90 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	63.06 %
Unclassified	root	N/A	4.50 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	3.60 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.90 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Aquabacterium pictum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	63.06 %
Unclassified	root	N/A	4.50 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	3.60 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.90 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Aquabacterium pictum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	63.06 %
Unclassified	root	N/A	4.50 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	3.60 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.90 %
unclassified Gemmata	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → unclassified Gemmata	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Aquabacterium pictum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	63.06 %
Unclassified	root	N/A	4.50 %
Methylocystis parvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	3.60 %
Gemmata sp. SH-PL17	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → unclassified Gemmata → Gemmata sp. SH-PL17	0.90 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig20108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	655	Open in IMG/M
2140918007\|ConsensusfromContig49848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	655	Open in IMG/M
3300000550\|F24TB_10998676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	523	Open in IMG/M
3300000789\|JGI1027J11758_12736090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	684	Open in IMG/M
3300000956\|JGI10216J12902_103540225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	920	Open in IMG/M
3300002461\|AADWTP_10008059	All Organisms → cellular organisms → Bacteria → Proteobacteria	17917	Open in IMG/M
3300002568\|C688J35102_119976633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	833	Open in IMG/M
3300004114\|Ga0062593_100701236	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300004114\|Ga0062593_101432761	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300004114\|Ga0062593_102316904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	604	Open in IMG/M
3300004156\|Ga0062589_100856887	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300004156\|Ga0062589_101190810	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300004156\|Ga0062589_101321309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	698	Open in IMG/M
3300004157\|Ga0062590_100344081	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300004157\|Ga0062590_102324651	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300004157\|Ga0062590_102325945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	564	Open in IMG/M
3300004463\|Ga0063356_100120247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2912	Open in IMG/M
3300004480\|Ga0062592_100339156	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300004633\|Ga0066395_10372752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	798	Open in IMG/M
3300004643\|Ga0062591_100139059	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300004643\|Ga0062591_101342102	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300005093\|Ga0062594_101306814	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005294\|Ga0065705_11164685	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005295\|Ga0065707_10308943	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300005332\|Ga0066388_102360643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	964	Open in IMG/M
3300005354\|Ga0070675_101118520	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300005355\|Ga0070671_100409719	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300005764\|Ga0066903_100248039	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300005983\|Ga0081540_1187851	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300006844\|Ga0075428_100287531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1769	Open in IMG/M
3300006846\|Ga0075430_101336155	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300007004\|Ga0079218_11032234	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300009094\|Ga0111539_10116239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3137	Open in IMG/M
3300009156\|Ga0111538_11994263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	730	Open in IMG/M
3300009527\|Ga0114942_1104047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	943	Open in IMG/M
3300009553\|Ga0105249_10888497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	958	Open in IMG/M
3300010147\|Ga0126319_1426377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	590	Open in IMG/M
3300010358\|Ga0126370_10153099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1683	Open in IMG/M
3300010359\|Ga0126376_10533442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1094	Open in IMG/M
3300010362\|Ga0126377_13554028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	504	Open in IMG/M
3300010398\|Ga0126383_11964276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	673	Open in IMG/M
3300010400\|Ga0134122_12323966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	582	Open in IMG/M
3300011440\|Ga0137433_1083143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	984	Open in IMG/M
3300012203\|Ga0137399_10175733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1726	Open in IMG/M
3300012204\|Ga0137374_10983916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	611	Open in IMG/M
3300012208\|Ga0137376_10379897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1227	Open in IMG/M
3300012212\|Ga0150985_100291745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300012212\|Ga0150985_104064687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1078	Open in IMG/M
3300012212\|Ga0150985_107150815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	547	Open in IMG/M
3300012212\|Ga0150985_115874492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	625	Open in IMG/M
3300012212\|Ga0150985_117392053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	506	Open in IMG/M
3300012212\|Ga0150985_119636371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	625	Open in IMG/M
3300012212\|Ga0150985_121580993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	773	Open in IMG/M
3300012469\|Ga0150984_110872677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	552	Open in IMG/M
3300012469\|Ga0150984_112431595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	513	Open in IMG/M
3300012469\|Ga0150984_120485551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	680	Open in IMG/M
3300012469\|Ga0150984_120864363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	689	Open in IMG/M
3300012514\|Ga0157330_1072499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	536	Open in IMG/M
3300012527\|Ga0136633_1053826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1764	Open in IMG/M
3300012893\|Ga0157284_10134842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	684	Open in IMG/M
3300012902\|Ga0157291_10262068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	581	Open in IMG/M
3300012909\|Ga0157290_10187716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	692	Open in IMG/M
3300012913\|Ga0157298_10397017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	524	Open in IMG/M
3300012944\|Ga0137410_10315563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1241	Open in IMG/M
3300012948\|Ga0126375_11748724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	541	Open in IMG/M
3300012971\|Ga0126369_11790317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	703	Open in IMG/M
3300014263\|Ga0075324_1043648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	858	Open in IMG/M
3300014326\|Ga0157380_11271687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	782	Open in IMG/M
3300015077\|Ga0173483_10423121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis parvus	690	Open in IMG/M
3300015200\|Ga0173480_10819036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	596	Open in IMG/M
3300015200\|Ga0173480_10837580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	591	Open in IMG/M
3300015242\|Ga0137412_10679819	Not Available	769	Open in IMG/M
3300015371\|Ga0132258_12020208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1450	Open in IMG/M
3300015373\|Ga0132257_101366771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	901	Open in IMG/M
3300018000\|Ga0184604_10231651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	643	Open in IMG/M
3300018073\|Ga0184624_10237727	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300018081\|Ga0184625_10368464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	745	Open in IMG/M
3300018422\|Ga0190265_10108782	All Organisms → cellular organisms → Bacteria	2619	Open in IMG/M
3300018422\|Ga0190265_12999509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	564	Open in IMG/M
3300018432\|Ga0190275_10145593	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300018432\|Ga0190275_13233893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	527	Open in IMG/M
3300018476\|Ga0190274_12257323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	641	Open in IMG/M
3300018481\|Ga0190271_11328754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	839	Open in IMG/M
3300019257\|Ga0180115_1146679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	632	Open in IMG/M
3300021339\|Ga0193706_1000157	All Organisms → cellular organisms → Bacteria → Proteobacteria	48441	Open in IMG/M
3300021560\|Ga0126371_13300814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	545	Open in IMG/M
3300022549\|Ga0212091_10030366	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300025923\|Ga0207681_10329765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1216	Open in IMG/M
3300025926\|Ga0207659_10925107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	750	Open in IMG/M
3300025930\|Ga0207701_10629589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	912	Open in IMG/M
3300026535\|Ga0256867_10048067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1732	Open in IMG/M
3300026557\|Ga0179587_10694823	Not Available	670	Open in IMG/M
3300028380\|Ga0268265_12319103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	543	Open in IMG/M
3300030006\|Ga0299907_10368114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1160	Open in IMG/M
3300030988\|Ga0308183_1170999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	548	Open in IMG/M
3300031170\|Ga0307498_10256016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	637	Open in IMG/M
3300031228\|Ga0299914_10777453	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → unclassified Gemmata → Gemmata sp. SH-PL17	800	Open in IMG/M
3300031538\|Ga0310888_10303401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	913	Open in IMG/M
3300031538\|Ga0310888_10570375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	684	Open in IMG/M
3300031847\|Ga0310907_10136081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	1110	Open in IMG/M
3300031854\|Ga0310904_10022845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	2788	Open in IMG/M
3300031902\|Ga0302322_101139924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	944	Open in IMG/M
3300031908\|Ga0310900_10995829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	689	Open in IMG/M
3300032144\|Ga0315910_10005754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	10122	Open in IMG/M
3300032180\|Ga0307471_101830919	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300034643\|Ga0370545_008446	All Organisms → cellular organisms → Bacteria → Proteobacteria	1487	Open in IMG/M
3300034671\|Ga0314796_187718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	504	Open in IMG/M
3300034675\|Ga0314800_060791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium pictum	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.58%
Host-Associated	Host-Associated	23.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.57%
Plants	Host-Associated → Plants	23.42%
Aquatic	Environmental → Aquatic	9.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.81%
Freshwater	Environmental → Aquatic → Freshwater	5.41%
Sediment	Environmental → Aquatic → Sediment	3.60%
Peat	Environmental → Terrestrial → Peat	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.41%
Loam	Environmental → Terrestrial → Soil → Loam	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.90%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	14.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.21%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	13.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.31%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Freshwater	0.90%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.90%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002461	Freshwater microbial communities from a drinking water treatment plant in Ann Arbor, Michigan, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022549	Cold Creek_combined assembly	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034675	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00013660	2124908043	Soil	MSKVNSQELSTRLSKRLANFKLSDAVISGLAERVLIDGLSIVKFDPCIYGICIDYFTDKVPDLGGLSARRGVTKWEVFPYGIIDWDRFHVRVAFNVDELEGKGLSREFNG
A_all_C_02938690	2140918007	Soil	MSKVNSQELSTRLSKRLANFKLSDAVISGLAERVLIDGLSIVKFDPCMYGICIDYFTDKVPDLGGLSARRGVTKWEVFPYGIIDWDRFHVRVAFNVDELEGKGLSREFNG
INPhiseqgaiiFebDRAFT_1013685641	3300000364	Soil	MKPSPKDLPQDPIPIRTKDLSVRLSKRLANFKLSDDVVNGIAERVLIDGLSIVRFDPCIYGICIDYFSDTLPRLDALSANRGVTKWEVFPYGI
F24TB_109986761	3300000550	Soil	MAVTSADLSTRLSKRLANFKLGDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYYTDKLPRLDGLGSKHGISKWEVFPYGIIEWDRFHVRVAFQVDELEGRGLTRGFGH*
JGI1027J11758_127360901	3300000789	Soil	MKPSPKDLPQDPIPIRTKDLSVRLSKRLANFKLSDDVVNGIAERVLIDGLSIVRFDPCIYGICIDYFSDXLPRLDXLSAXRGVXKWEVFPYGIIDWDRFHVRIAFNVDELEGKGLMRDXNR*
JGI10216J12902_1035402252	3300000956	Soil	MPPVTSRVLSTRLSKRLANFKLGDAVIKSLADRVLIDGLSIARFDPCIYGICIDYFTDKMPSLEQLSPKHGITKWEVFPYGIIDWDRFHVRVAFQVDELEGRGVVRGFGG*
AADWTP_100080592	3300002461	Freshwater	MATLNNKELSARMSKRLANFKMSDAAIKGLADRVLIDGLQIFRFDPCMYGICIDYFTDKFPDLKNIGAKHGISKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLQREFRN*
C688J35102_1199766332	3300002568	Soil	MSPVTTKDASARLSQRLASFKLGDAVIKRLSSQIMIEGLNIGRINPCIYGICIDYFTDKLPSVERLSPKQGITKWEVFPYGIIDWDRFHVRVAFEVNELEGRGVVRGFEH*
Ga0062593_1007012361	3300004114	Soil	GVHMAVTSAELTPRLSKRLANFKLSDNAIKAISDRVVIDGLSIFRFDPCMYGICIDYFTDKIPRLDALGPKHGITKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLTRGFGH*
Ga0062593_1014327612	3300004114	Soil	MPPVNAKQLSTRMSKRLANFQLSDAVVSGLAERVLIDGLSIARFDPCIYGICIDYFSDKMPRLDVLTPKHQVAKWEVFPYGILVWDRFHVRIAFQVDELEGKQVGGIGH*
Ga0062593_1023169041	3300004114	Soil	MAPTNPKQVSARLSQRLANFKLTDAVIKRLTQRVLIEDMSIVRIDPCIYGICIDYHSDKIPQLQGLTADRRISKWEVFPYGIIEWDRFHVRVAYEVDELEGKGIEGGFVH*
Ga0062593_1034724521	3300004114	Soil	MPPVNKKQLSTRLSKRLANFKLSDSVISGLVDRVLIDGLEISRFDPCIYGICIDYFSDTHPRLEGLTPKHGVTKWEVFPYGIIDWDRF
Ga0062589_1008568872	3300004156	Soil	MPPVNKKQLSTRLSKRLANFKLSDSVISSLVDRVLIDGLEISRFDPCIYGICIDYFSDTHPRLEGLTPKHGVTKWEVFPYGIIDWDRFHVRIAFAVDELEGKGLVREFGR*
Ga0062589_1011908102	3300004156	Soil	MANVTSAELTPRLSKRLANFKLSDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYFTDKFPRLDAVGAKHGIAKWEVFPYGIIDWDRFHVRVAFQIDELEGKGLERGFGH*
Ga0062589_1013213091	3300004156	Soil	MAVTSAELTPRLSKRLANFKLSDNAIKAISDRVVIDGLSIFRFDPCMYGICIDYFTDKIPRLDALGPKHGITKWEVFPYGIIDWDRFHVRV
Ga0062590_1003440812	3300004157	Soil	MAVTSAELTPRLSKRLANFKLSDNAIKAISDRVVIDGLSIFRFDPCMYGICIDYFTDKIPRLDALGPKHGITKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLTRGFGH*
Ga0062590_1023246512	3300004157	Soil	AVIKRLTQRVLIEDMSIVRIDPCIYGICIDYHSDKIPQLQGLTADRRISKWEVFPYGIIEWDRFHVRVAYEVDELEGKGIEGGFVH*
Ga0062590_1023259451	3300004157	Soil	MATVTSAELSSRLSKRLANFKLSDAAVKAISDRVLIDGLSIFRFDPCMYGICIDYFTDKIPRLDALGPKHGITKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLTRGFGH*
Ga0062590_1026322851	3300004157	Soil	MPPVNPKQLSTRLSARLANFKLTDAAINGLARRVVLDGLSIARFDPCIYGICIDYFTDTMPNLNVLTPKHGVSKWEVFPYGIIDWD
Ga0063356_1001202473	3300004463	Arabidopsis Thaliana Rhizosphere	MAVSGSNEVSARLSKRLANFKLSDAVVKRLSERVTIDGLRIGRINPCIYGICIDYYSDKLPRLDALTPKSGISRWEVFPYGIIDWDRFLVRVAFEVDELEGRGLTRGFGH*
Ga0062592_1003391563	3300004480	Soil	MPPVNKKQLSTRLSKRLANFKLSDSVISGLVDRVLIDGLEISRFDPCIYGICIDYFSDTHPRLEGLTPKHGVTKWEVFPYGIIDWDRFHVRIAFAVDELEGKGLVREFGH*
Ga0066395_103727521	3300004633	Tropical Forest Soil	MAPVTSKDLSLRMSKRLANFKLSDDVIKALADRVLIEGLSIYRFDPCIYGICIDYFSDKIPRLDQLTGKLGIAKWEVFPYGIIDWDRFHVRIAFNVDELEGKAPMRGFDS*
Ga0062591_1001390592	3300004643	Soil	MPPVNKKQLSTRLSKRLANFKLSDSVISGLVDRVLIDGLEISRFDPCIYGICIDYFSDTHPRLEGLTPKHGVTKWEVFPYGIIDWDRFHVRIAFAVDELEGKGLVREFGR*
Ga0062591_1013421021	3300004643	Soil	ARLSKRLANFKLSDAVVKRLSERVTIDGLRIGRINPCIYGICIDYYSDKLPRLDALTPKSGISRWEVFPYGIIDWDRFLVRVAFEVDELEGRGLTRGFGH*
Ga0062594_1013068142	3300005093	Soil	MPPVNPKQLSTRLSARLANFKLSDVAINGLARRVVIDGLSIARFDPCIYGICIDYFTDQMPKLDVLTPKHGVTKWEVFPYGILDWDRFHVRIAFQVDEL
Ga0065705_111646852	3300005294	Switchgrass Rhizosphere	MPPVNKQELSARMSRRLANYKLSDAVINGIAERVLIDGLSIGRWNPCIYGICIDYWTDKLPPLDKLSPKLGVSKWEVFPYGIIDWDRFRVRVAFTVDELEGKVPGGGFGH*
Ga0065707_103089432	3300005295	Switchgrass Rhizosphere	MPPVNKQELSARMSKRLANYKLGDAVINGIAERVLIDGLSIGRWNPCIYGICIDYWTDKLPPLDKLSPRLGVSKWEVFPYGIIDWDRFRVRVAFTVDELEGKVPGGGFGH*
Ga0066388_1023606431	3300005332	Tropical Forest Soil	MAPVTSKDLSLRMSKRLANFKLSDDVIKALADRVLIEGLSIYRFDPCIYGICIDYFSDKIPRFDQLTGKLGIAKWEVFPYGIIDWDRFHVRIAFNV
Ga0070675_1011185202	3300005354	Miscanthus Rhizosphere	SKRLANFKLSDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYFTDKFPRLDAVGAKHGIAKWEVFPYGIIDWDRFHVRVAFQIDELEGKGLERGFGH*
Ga0070671_1004097192	3300005355	Switchgrass Rhizosphere	MAPTNPKQVSARLSQRLANFKLTDAVIKRLTQRVLIDDMSIVRIDPCIYGICIDYHSDKIPQLQGLTADRRISKWEVFPYGIIEWDRFHVRVAYEVDELEGKGIEGGFVH*
Ga0066903_1002480392	3300005764	Tropical Forest Soil	MAPVTSKDLSLRMSKRLANFKLSDDVIKALADRVLIEGLSIYRFDPCIYGICIDYFSDKIPRFDQLTGKLGIAKWEVFPYGIIDWDRFHVRIAFNVDELEGKAPMRGFDS*
Ga0081540_11878512	3300005983	Tabebuia Heterophylla Rhizosphere	SDQVRCAVPATAQDVSGRLSKRLANYKLGDAVIKRLVDRVLIDGLEIARIDPCIYGICIDYWTRELPQLGVDFKRGITKWEVFPYGIIDWDLFRVRVAFEVDELEGKAVPPRGFVN*
Ga0075428_1002875312	3300006844	Populus Rhizosphere	MPLTNKELAARLSKRLANFKLSDSAVKSLADRVLIDGLSISRFDPCMYGICIDYFTDKMPRLDSTLADRGIRKWEVFPYGIIDWDRFRVSVAFNVDELEGRGLNRELGR*
Ga0075430_1013361551	3300006846	Populus Rhizosphere	LSDAVVKRLSERVTIDGLRIGRINPCIYGICIDYYSDKLPRLDALTPKSGISRWEVFPYGIIDWDRFLVRVAFEVDELEGRGLTRGFGH*
Ga0079218_110322342	3300007004	Agricultural Soil	MPEVTGKDLSARLSKRLANFKLSDAAIKSIADRVLIDGLAIYRFNPCIYGICIDYFTDKLPKLDKLGPNRGIAKWEVFPYGIIDWDRFQVRVAFNVDELEGKGIAREFGP*
Ga0111539_101162396	3300009094	Populus Rhizosphere	MPVTNKDLAARLSKRLANFKLSDAAVKSLADRVLIDGLSISRFDPCMYGICIDYFTDKMPRLDSTLADRGIRKWEVFPYGIIDWDRFRVSVAFNVDELEGRGLNRELGH*
Ga0111538_119942632	3300009156	Populus Rhizosphere	MPLTNKELAARLSKRLANFKLSDSAVKSLADRVLIDGLSISRFDPCMYGICIDYFTDKMPRLDSTLADRGIRKWEVFPYGIIDWDRFRVSVAFNVDELEGRGLNRE
Ga0114942_11040471	3300009527	Groundwater	MATVNNKELSARMSRRLANFKLSDAAIKGLADRVLIDGLQIFRFDPCMYGICIDYFTDKFPDLKSISARHGISKWEVFPYGIIDWDRFHVRVAFEVNELEGMGLQREFRN*
Ga0105249_108884971	3300009553	Switchgrass Rhizosphere	MAVSGSNEVSARLSKRLANFKLSDAVVKRLSERVTIDGLRIGRINPCIYGICIDYYSDKLPRLDALTPKSGISRWEVFPYGIIDWDRFLVRVAFEVDE
Ga0126319_14263772	3300010147	Soil	MPPVNKKQLTSRLSKRLANFKLSDSVISSLVDRVLIDGLAISRFDPCIYGICIDYFTETMPKLDVLTPKHQVTKWEVFPYGIIDWDRFHVRIAFAVDELEGKGLVREFSH*
Ga0126370_101530992	3300010358	Tropical Forest Soil	MAPVTSKDLSLRMSKRLANFKLSDDVIKALADRVLIEGLSIYRFDPCIYGICIDYFSDKIPRLDQLTWKLGIAKWEVFPYGIIDWDRFHVRIAFNVDELEGKAPMRGFDS*
Ga0126376_105334421	3300010359	Tropical Forest Soil	MAPVTSKDLSLRMSKRLANFKLSDDVIKALADRVLIEGLSIYRFDPCIYGICIDYFSDKIPRLDQLTGKLGIAKWEVFPYGIIDWDRFHVRIAFNVD
Ga0126377_135540282	3300010362	Tropical Forest Soil	VPASAQDVSGRLSKRLANYKLGDAVIKRLVDRVLIDGLEIARIDPCIYGICIDYWTRELPQLGPEFKRGISKWEVFPYGIIDWDMFRVRVAFEV
Ga0126383_119642761	3300010398	Tropical Forest Soil	MAPVTSKDLSLRMSKRLANFKLSDDVIKALADRVLIEGLSIYRFDPCIYGICIDYFSDKIPRLDQLTGKLGIAKWEVFPYGIIDWDRFHVRIAFNVDELEGKAPMR
Ga0134122_123239662	3300010400	Terrestrial Soil	LEGVPMAVTSADLSTRLSKRLANFKLGDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYYTDKLPRLDGAFGPKRGIAKWEVFPYGIIDWDRFHVRVAFNVDELEGKGLMRDFGG*
Ga0137433_10831432	3300011440	Soil	MPEITTKDLSQQLSKRLANFKLSNGVITRLADRVLIDGLSIGRFNPCIYGICIDYFTSKVPKLEGILDKRGIATIEVFPYGIIDWDRFHVRVGFRVDELEGTGATRGFGG*
Ga0137399_101757332	3300012203	Vadose Zone Soil	MATVSSKELSTRMSKRLANFQLSDAVITELANRVLIDGLSIARFNPCIYGICADYFSDKFPRLESLATKNGIAKWEVFPYGVVASDRFLVRVAFQVDELVGKELPGEFVR*
Ga0137374_109839161	3300012204	Vadose Zone Soil	MAAVTSKQLSARMSSRLANFQLSDAVINQLAERVVIDGLSIAWFNPCIYGICIDYWSDKMPRLEKLTPKLGISKWEVFPYGIINWDRFLVRIAFNVDELEGKNLTGEFHR*
Ga0137376_103798972	3300012208	Vadose Zone Soil	LPREGSEELGPSPDHQQEFTMPVTTRDLSARLSKRLANFKLSDAVINSLADRVLIDGLTIFRFDPCIYGICIDYFSDKLPQLNTLSSKLGIAKWEVFPYGIIDWDRFHVRIAYNVDELEGKGLMREFGH*
Ga0150985_1002917452	3300012212	Avena Fatua Rhizosphere	METVSSKELSTRMSKRLANFKLSDAVITELANRVLIDDLSIARFNPCIYGICIDYFSDKFPRLEALSTKNGIAKWEVFPYGVVASDRFLVRVAFQVDELVGKELAGDFVR*
Ga0150985_1040646871	3300012212	Avena Fatua Rhizosphere	MAPVTSRDVAGRLSKRLANFKLSDAVINGLADRVMIEGLSIVRFNPCIYGICFEYHADKMPRLDALQPKSGIYKLEVFPLGIIDWDRYLVRVAFNVDELEGKGLSRDLND*
Ga0150985_1071508151	3300012212	Avena Fatua Rhizosphere	MPPVTAGDASKRLSQRLASFKLGDAVIKRLSSQIMIEGLNIGRINPCIYGICIDYFTEKLPSLERLSAKQAITKWEVFPYGIIDWDRFHVRVAFEVNELEGRGVVRGFEH*
Ga0150985_1158744922	3300012212	Avena Fatua Rhizosphere	EKRSLRLRRGNARTESGGLMPPTNPKEASVRLSQRLANFKLGDAVIKRLSSQILIEGLSIGRINPCIYGICIDYFTDKLPSLERLSAKQAVAKWEVFPYGIIDWDHFHVRVAFEVNELEGRGVVRGLER*
Ga0150985_1173920531	3300012212	Avena Fatua Rhizosphere	MPPVTTKDASARLSQRLASFKLGDAVIKRLSSQINIEGLNIGRINPCIYGICIDYFTDKLPSVERLSPKQGITKWEVFPYGIIDWDRFHVRVAFEVNELEGRGVVRGFEP*
Ga0150985_1196363711	3300012212	Avena Fatua Rhizosphere	PMGFRLALATYLLGTHAQGVTMATVTSKDLSARMSKRLANFKLSDAVITGLAERVLIDGLSISRFDPCIYGICIDYFSDKMPRLDVLSAKHGIAKWEVFPYGIIDWDRFHVRIAYNVDELEGKGLAREFGH*
Ga0150985_1215809931	3300012212	Avena Fatua Rhizosphere	MELANKPINSKDLSTRLSKRLANYELSDDLINTIADRVLVDGLSIAWFDPCIYGICIDYFADKFPRLDVLSSKRGIAKWEVFPYGIIDWDRFHVRIAFNIDELEGKGPVGEFRR*
Ga0150984_1108726771	3300012469	Avena Fatua Rhizosphere	ASARLSQRLASFKLGDAVIKRLSSQIMIEGLNIGRINPCIYGICIDYFSDKLPSIERLSAKSAITKWEVFPYGIIDWDRFHVRVAFEVNELEGRGVVRGFEH*
Ga0150984_1124315951	3300012469	Avena Fatua Rhizosphere	MAPTNPKQVSARLSQRLANFKLTDAVIKRLTQRVLIEDMSIVRIDPCIYGICIDYHSDKIPQLQGLTADRRISKWEVFPYGIIEWDRFHVRVAYEVDELEG
Ga0150984_1204855512	3300012469	Avena Fatua Rhizosphere	MSKRLANFKLSDAVISGLADRVLIDGLSISRFNPCIYGICIDYFSDKMPRLDVLSSKHGIAKLEVFPYGIIDWDRFHVRIAFNVDELEGKVPMREFNL*
Ga0150984_1208643631	3300012469	Avena Fatua Rhizosphere	IDSPKRRQMMAPVTSRDVAGRLSKRLANFKLSDAVINGLADRVMIEGLSIIRFNPCIYGICFEYHAEKMPRLDALQPKSGIYKLEVFPLGIIDWDRYLVRVAFNVDELEGKGLSRDLND*
Ga0157330_10724991	3300012514	Soil	MATVTSADLSARLSKRLANFKLADAAIKSLADRVLIDGLSIFRFDPCIYGICIDYFTDKLPQLAVDPKTQLKKWEVFPYGIIDWDRFHVRVAYEVDELEGKGIEGGFVH*
Ga0136633_10538262	3300012527	Polar Desert Sand	MPPVTTKVLSTRLSKRLANYKLSDTVIRNLSDRVLIDGLSIARFDPCIYGICIDYFTDKLPSLERLSPKLGITKWEVFPYGIIDWDRFHVRVAFEVDELEGRGMVREFNR*
Ga0157284_101348422	3300012893	Soil	MAVTSAELTPRLSKRLANFKLSDNAIKAISDRVVIDGLSIFRFDPCMYGICIDYFTDKIPRLDALGPKHGITKWEVFPYGIIDWDRFHVRVAFQVDELEGKG
Ga0157291_102620682	3300012902	Soil	SDNAIKAISDRVVIEGLSIFRFDPCMYGICIDYFTDKMPRLDALGPKHGISKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLNRGFGH*
Ga0157290_101877161	3300012909	Soil	MAVTSAELTPRLSRRLANFKLSDNAIKAISDRVVIEGLSIFRFDPCMYGICIDYFTDKMPRLDALGPKHGISKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLNRGFGH*
Ga0157298_103970171	3300012913	Soil	RINQGVHMAVTSAELTPRLSKRLANFKLSDNAIKAISDRVVIDGLSIFRFDPCMYGICIDYFTDKIPRLDALGPKHGITKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLTRGFGH*
Ga0137410_103155632	3300012944	Vadose Zone Soil	MAPVNSKELSARMSKRLANFKLSDAVITGLADRVLIDGLSIARFDPCIYGICIDYFTDKLPRLDHLSPKHGIAKWEVFPYGIIDWDRFHVRIAFNVDELEGKGSLREFAH*
Ga0126375_117487241	3300012948	Tropical Forest Soil	VQTLNTQDLSARLSQRLAAFELSDQAITALADRVLIDGLSIGRLNPCIYGLCIDYFTDKLPGQDVFSAKRGIAKWEVFPYGIINWDRFHVSVAYSVDELEGRGLTRDLHQ*
Ga0126369_117903171	3300012971	Tropical Forest Soil	MAPVTSKDLSLRMSKRLANFKLSDDVIKALADRVLIEGLSIYRFDPCIYGICIDYFSDKIPRLDQLTWKLGIAKWEVFPYGIIDWDRFHVRIAFNVDELEGKAPM
Ga0075324_10436481	3300014263	Natural And Restored Wetlands	METVSSKELSARMSKRLANFRLADSVITELADRVLIDGLSIAWFDPCIYGICIDYFSDKMPQLDHLTVKHGISKWEVFPYGIIDWDRFHVRIAFHVDELEGKGLVREFNR*
Ga0157380_112716871	3300014326	Switchgrass Rhizosphere	MAVTSAELTPRLSKRLANFKLSDNAIKAISDRVVIEGLSIFRFDPCMYGICIDYFTDKMPRLDALGPKHGISKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLNRGFGH*
Ga0173483_104231212	3300015077	Soil	MAVSGSNEVSARLSKRLANFKLSDAVVKRLSERVTIDGLRIGRINPCLYGICIDYYSDKLPRLDALTPKSGISRWEVFPYGIIDWDRFLVRVAFEVDELEGRGLTRGFGH*
Ga0173480_108190362	3300015200	Soil	SAELTPRLSKRLANFKLSDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYFTDKFPRLDAVGAKHGIAKWEVFPYGIIDWDRFHVRVAFQIDELEGKGLERGFGH*
Ga0173480_108375801	3300015200	Soil	MANVTSAELSPRLSKRLANFKLSDNAIKAISDRVLIDGLSIFRFDPCMYGICIDYFTDKIPRLDALGPKHGITKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLTRGFGH*
Ga0137412_106798192	3300015242	Vadose Zone Soil	MLAARLPFHRFEEAFAYRVLVAKESTMTPVNSKELSARLSKRLANFKLSDSVISGLADRVLIDGLSIGRFDPCIYGICADYFSDKFPRLESLATKNGIAKWEVFPYGVVASDRFLVRVAFQVDELVGKELPGEFVR*
Ga0132258_120202082	3300015371	Arabidopsis Rhizosphere	ACRRSPVDPRYPDDEEVCMAPTNPKLVTARLSQRLANFKLTDAVIKRLTQRVLIEDMSIIRIDPCIYGICIDYYSEKIPQLQGLTSDRRISKWEVFPYGIIDWDRFHVRVAYEVDELEGKGIEGGFVH*
Ga0132257_1013667711	3300015373	Arabidopsis Rhizosphere	KLVTARLSQRLANFKLTDAVIKRLTQRVLIEDMSIIRIDPCIYGICIDYYSEKIPQLQGLTSDRRISKWEVFPYGIIDWDRFHVRVAYEVDELEGKGIEGGFVH*
Ga0184604_102316512	3300018000	Groundwater Sediment	DLSVRLSKRLANFKLSDAAVRSLADRVIIDGLSISRFNPCIYGICIDYFSDKYPKLDGLGPKLGISKWEVFPYGIIDWDRFHVRVAFQVDELEGKVAGREFGP
Ga0184624_102377272	3300018073	Groundwater Sediment	MPVTAQDLSGRMSKRLANYKLGDAVIKRLVDRVLIDGLEISRIDPCIYGICIDYWTAEFPRFEGFDFKRGIAKWEVFPYGIIDWDRFRVQVAFEVDELEGKVTPRGFLG
Ga0184625_103684641	3300018081	Groundwater Sediment	MAVTSAELTPRLSKRLANFKLSDNAIKAISDRVVIDGLSIFRFDPCMYGICIDYFTDKMPRLDALGPKHGISKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLNRGFGH
Ga0190265_101087822	3300018422	Soil	MSPATRKDVTVRLSKRLANYKLTDATIKRLADRVLIDGLSIAWFNPCIYGICIDYFTNEMPRLDVLSPKHSITKWEVFPYGIIDWDHFHVRIAFQVDELEGKGLTGGFER
Ga0190265_129995091	3300018422	Soil	MPVNPKQLSTRLSSRLANFKLSDTVINGISRRVLIEGLSIARFDPCIYGICIDYYTDKMPQLQGLSPKQGITKWEVFPYGIIEWDRFLVRVAFQVDELEGKGLTREFLR
Ga0190275_101455933	3300018432	Soil	MPDPDLTERLSKRLANAKLSDAVIKGIADRVAIDGLSIGRFSPCAYGICIDYFTDRLPRLDGLTPKRGVVKWEVFPYGIIDWDRFHVRVAFNVDELAGKGFAGDFIR
Ga0190275_132338931	3300018432	Soil	MPPVTTKVLSTRLSKRLANYKLSDAVIRNLSDRVLIEGLSIARFNPCIYGICIDYFTDKMPSLERLSPKLGIAKWEVFPYGIIDWDRFHVRVAFEVDELEGKGLVRGFSN
Ga0190274_122573231	3300018476	Soil	MPPVNAKQLSTRLSSRLANFKLTDAAINGLARRVVIDGLSIARFDPCIYGICIDYFTDQMPKLDVLTPKHGVTKWEVFPYGILDWDRFHVRIAFQVDELEGKGLQREFSH
Ga0190271_113287542	3300018481	Soil	MATVNSKELAARMSRRLANFKLSDAAIKGLADRVLIEGLQIFRFDPCMYGICIDYFTDKFPDLKTIGAKHSISKWEVFPYGIIDWDRFHVRVAFEVNELEGKGLQREFRN
Ga0180115_11466791	3300019257	Groundwater Sediment	MTTVNSKELSARMSKRLANFKLSDAVINGLADRVLIDGLSIFRFDPCIYGICIDYFSDKMPRLDVLSSKHGISKWEVFPYGIIDWDRFHVRIAFNVDELEGKGLMREFNH
Ga0193706_100015734	3300021339	Soil	MIALPQDPIPLKDLSERLSKRLANFRLSDAVIKGIAERVLIDGLSLVRFDPCIYGICADYFSEKVPQLDGLAARRGVKKWEVFPYGIIDWDLFHVTIAYNVDELEGKGQLREFNR
Ga0126371_133008141	3300021560	Tropical Forest Soil	MAPVTSKDLSLRMSKRLANFKLSDDVIKALADRVLIEGLSIYRFDPCIYGICIDYFSDKIPRLDQLTWKLGIAKWEVFPYGIIDWDRFHVRIAFNVDELEGKAPMRGFDS
Ga0212091_100303663	3300022549	Groundwater	MATVNNKELSARMSRRLANFKLSDAAIKGLADRVLIDGLQIFRFDPCMYGICIDYFTDKFPDLKSISARHGISKWEVFPYGIIDWDRFHVRVAFEVNELEGMGLQREFRN
Ga0207681_103297652	3300025923	Switchgrass Rhizosphere	MAVTSAELTPRLSKRLANFKLSDNAIKAISDRVVIDGLSIFRFDPCMYGICIDYFTDKIPRLDALGPKHGITKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLTRGFGH
Ga0207659_109251072	3300025926	Miscanthus Rhizosphere	SKRLANFKLSDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYFTDKFPRLDAVGAKHGIAKWEVFPYGIIDWDRFHVRVAFQIDELEGKGLERGFGH
Ga0207701_106295892	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MANVTSAELTPRLSKRLANFKLSDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYFTDKFPRLDAVGAKHGIAKWEVFPYGIIDWDRFHVRVAFQIDELEGKGLERGFGH
Ga0256867_100480673	3300026535	Soil	MPEVTSRELSTRLSKRLANFKLADAAIKSLADRVLIDGLSIARFDPCIYGICIDYFTDRMPKLDALSPKHGVWKWEVFPYGIIDWDRFLVRIAFNVDELEGRGLTRGFGR
Ga0179587_106948232	3300026557	Vadose Zone Soil	MATVSSKELSTRMSKRLANFQLSDAVITELANRVLIDGLSIARFNPCIYGICADYFSDKFPRLESLATKSGIAKWEVFPYGVVASDRFLVRVAFQVDELVGKELPGEFVR
Ga0268265_123191032	3300028380	Switchgrass Rhizosphere	NFKLSDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYFTDKFPRLDAVGAKHGIAKWEVFPYGIIDWDRFHVRVAFQIDELEGKGLERGFGH
Ga0299907_103681142	3300030006	Soil	MKPASQKQLTTQLSQRLANFKLSDAAIRRLADRVLIDGLSIARFDPCIYGICIDYFTETMPKLELLSPKHGISKWEVFPYGIIDWDRFHVRIAFTVNELEGKGLVRGFNR
Ga0308183_11709992	3300030988	Soil	MPPVTTKVLSTRLSKRLANYKLSDAVIRNLSDRVLIEGLSIARFNPCIYGICIDYFTDKMPSLERLSPKLGIAKWEVFPYGIIDWDRFHVRVAFEVDELEGRGVVREFSH
Ga0307498_102560161	3300031170	Soil	MAPVNAKQLSARMSKRLANFQLSDAVINGLSERVLIDGLSIARFDPCIYGICIDYFSDKMPRLDVLTPKHNVAKWEVFPYGILVWDRFLVRVAFQVDELEGKGLVGEL
Ga0299914_107774532	3300031228	Soil	MATVTSKELSARMSKRLANFKLSDAVISGLADRVLIDGLSIARFDPCIYGICIDYFTDKIPQLNRLTPKHGISKWEVFPYGIIDWDRFRVRIAFNVDELEGKGLVRDFQH
Ga0310888_103034011	3300031538	Soil	MAVTSAELTPRLSRRLANFKLSDNAIKAISDRVVIEGLSIFRFDPCMYGICIDYFTDKMPRLDALGPKHGISKWEVFPYGIIDWDRFHVRVAFQVDELEGKGLNRGFGH
Ga0310888_105703751	3300031538	Soil	MANVTSAELTPRLSKRLANFKLSDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYFTDKFPRLDAVGAKHGIAKWEVFPYGIIDLDRFHVRVAFQIDELEGKGLERGFGH
Ga0310907_101360812	3300031847	Soil	EVSARLSKRLANFKLSDAVVKRLSERVTIDGLRIGRINPCIYGICIDYYSDKLPRLDALTPKSGISRWEVFPYGIIDWDRFLVRVAFEVDELEGRGLTRGFGH
Ga0310904_100228453	3300031854	Soil	MAVSGSNEVSARLSKRLANFKLSDAVVKRLSERVTIDGLRIGRINPCIYGICIDYYSDKLPRLDALTPKSGISRWEVFPYGIIDWDRFLVRVAFEVDELEGRGLTRGFGH
Ga0302322_1011399241	3300031902	Fen	MSPATSTDLPARLSKRLANFKLGDAVIKSIADRIVIDGLSILRFDPCIYGICIDYFTEKFPALDKLTPRHGVSKWEVFPYGIIQWDRFIVRVSFDV
Ga0310900_109958292	3300031908	Soil	MAITSAELTPRLSKRLANFKLSDAVIKGIADRVLIDGLTIFRFDPCIYGICIDYFTDKFPRLDAVGAKHGIAKWEVFPYGIIDWDRFHVRVAFQIDELEGKGLERGFGH
Ga0315910_100057543	3300032144	Soil	MATVSTKELSARMSKRLANFKLSDAAIRSLADRVLIEGLSIGRFNPCIYGICIDYFSDKYPRLEGLSKKLGVSKWEVFPYGIIDWDRFLVRVAFDVAEFEGKGLARELGH
Ga0307471_1018309192	3300032180	Hardwood Forest Soil	PIPVKTMTERLSHRLANFKLSDAVITALAEPVLIDGLSIGRFDLCTYGIHVDYFTNKPPRLDHFSAKLGIAKWEVFPYGIIDWDLFHVRVAFNVDALERKGLMRDFGG
Ga0370545_008446_971_1294	3300034643	Soil	VNKKQLSTRLSKRLANFKLSDAVISGLVDRVLIDGLEISRFDPCIYGICIDYFSDTHPRLEGLTPKHGVTKWEVFPYGIIDWDRFHIRIAFAVDELEGKGLVREFGH
Ga0314796_187718_140_472	3300034671	Soil	MAVSGSNEVSARLSKRLANFKLSDAVVKRLSERVTIDGLRIGRINPCIYGICIDYFTDKFPRLDAVGAKHGIAKWEVFPYGIIDWDRFHVRVAFQIDELEGKGLERGFGH
Ga0314800_060791_112_444	3300034675	Soil	MAVSGSNEVSARLSKRLANFKLSDAVVKRLSDRVTIDGLRIGRINPCIYGICIDYYSDKLPRLDALTPKSGISRWEVFPYGIIDWDRFLVRVAFEVDELEGRGLTRGFGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085317

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences