Metagenome Family F085310

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F085310
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	73 residues
Representative Sequence	AKIPVSIAMSLAAARAGRHALGTKPAEIIKNAKAYASLGVETLIISANTSDPREARSALEMIAREVAPALAS
Number of Associated Samples	96
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.99 %
% of genes near scaffold ends (potentially truncated)	87.39 %
% of genes from short scaffolds (< 2000 bps)	81.08 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (77.477 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.514 % of family members)
Environment Ontology (ENVO)	Unclassified (18.919 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.036 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.00% β-sheet: 12.00% Coil/Unstructured: 55.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
c.1.16.1: Bacterial luciferase (alkanal monooxygenase)	d1luca_	1luc	0.77269
c.1.16.3: F420 dependent oxidoreductases	d1ezwa_	1ezw	0.76908
c.1.16.0: automated matches	d7bipa_	7bip	0.74268
c.1.16.3: F420 dependent oxidoreductases	d1rhca_	1rhc	0.73623
c.1.16.0: automated matches	d5lxea_	5lxe	0.73228

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05721	PhyH	8.11
PF00106	adh_short	6.31
PF13561	adh_short_C2	6.31
PF13489	Methyltransf_23	4.50
PF03060	NMO	3.60
PF02720	DUF222	3.60
PF07110	EthD	3.60
PF00496	SBP_bac_5	2.70
PF10094	DUF2332	2.70
PF08241	Methyltransf_11	2.70
PF00578	AhpC-TSA	1.80
PF07366	SnoaL	1.80
PF00296	Bac_luciferase	1.80
PF01522	Polysacc_deac_1	1.80
PF04392	ABC_sub_bind	1.80
PF03009	GDPD	0.90
PF01425	Amidase	0.90
PF00335	Tetraspanin	0.90
PF00753	Lactamase_B	0.90
PF12681	Glyoxalase_2	0.90
PF04909	Amidohydro_2	0.90
PF01850	PIN	0.90
PF00211	Guanylate_cyc	0.90
PF01315	Ald_Xan_dh_C	0.90
PF09448	MmlI	0.90
PF00486	Trans_reg_C	0.90
PF00903	Glyoxalase	0.90
PF05977	MFS_3	0.90
PF13578	Methyltransf_24	0.90
PF00571	CBS	0.90
PF00206	Lyase_1	0.90
PF11066	DUF2867	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	8.11
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	3.60
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	3.60
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	1.80
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.80
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.80
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.90
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.90
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.90
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.48 %
Unclassified	root	N/A	22.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.48 %
Unclassified	root	N/A	22.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.48 %
Unclassified	root	N/A	22.52 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	29.73 %
Unclassified	root	N/A	22.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	29.73 %
Unclassified	root	N/A	22.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.50 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	27.93 %
Unclassified	root	N/A	22.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.80 %
Candidatus Handelsmanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria	1.80 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	27.03 %
Unclassified	root	N/A	22.52 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	1.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.80 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	27.03 %
Unclassified	root	N/A	22.52 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	1.80 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	27.03 %
Unclassified	root	N/A	22.52 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	1.80 %
Leptothermofonsia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptothermofonsia	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	27.03 %
Unclassified	root	N/A	22.52 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	1.80 %
Leptothermofonsia sichuanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptothermofonsia → Leptothermofonsia sichuanensis	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_13874959	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	749	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101245580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300000550\|F24TB_10382576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	718	Open in IMG/M
3300000956\|JGI10216J12902_104423274	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300004268\|Ga0066398_10040261	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300004281\|Ga0066397_10083593	Not Available	642	Open in IMG/M
3300004463\|Ga0063356_103211162	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	704	Open in IMG/M
3300005347\|Ga0070668_100440650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1118	Open in IMG/M
3300005364\|Ga0070673_101075560	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005406\|Ga0070703_10237487	Not Available	733	Open in IMG/M
3300005446\|Ga0066686_10197584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1346	Open in IMG/M
3300005468\|Ga0070707_100636108	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005471\|Ga0070698_100599959	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300005518\|Ga0070699_101044018	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005555\|Ga0066692_10094559	All Organisms → cellular organisms → Bacteria → Proteobacteria	1761	Open in IMG/M
3300005558\|Ga0066698_10185605	All Organisms → cellular organisms → Bacteria → Proteobacteria	1419	Open in IMG/M
3300005598\|Ga0066706_10422933	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005719\|Ga0068861_100370502	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300005844\|Ga0068862_101311550	Not Available	725	Open in IMG/M
3300006034\|Ga0066656_10347892	Not Available	958	Open in IMG/M
3300006034\|Ga0066656_10637622	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300006844\|Ga0075428_101641111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	672	Open in IMG/M
3300006844\|Ga0075428_102506145	Not Available	528	Open in IMG/M
3300006852\|Ga0075433_10381374	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300006852\|Ga0075433_10790989	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300006853\|Ga0075420_100014031	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7149	Open in IMG/M
3300006854\|Ga0075425_100612277	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300006871\|Ga0075434_100495722	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300006871\|Ga0075434_100982111	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300006914\|Ga0075436_100250680	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300007076\|Ga0075435_100059331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3101	Open in IMG/M
3300007258\|Ga0099793_10536246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300009012\|Ga0066710_100160724	All Organisms → cellular organisms → Bacteria → Proteobacteria	3141	Open in IMG/M
3300009147\|Ga0114129_11905932	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300009162\|Ga0075423_11707218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300009162\|Ga0075423_12945593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	522	Open in IMG/M
3300009804\|Ga0105063_1017715	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	822	Open in IMG/M
3300009815\|Ga0105070_1042917	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	827	Open in IMG/M
3300009819\|Ga0105087_1037281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	759	Open in IMG/M
3300010043\|Ga0126380_10171829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	1417	Open in IMG/M
3300010043\|Ga0126380_10381193	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300010046\|Ga0126384_10019595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4351	Open in IMG/M
3300010304\|Ga0134088_10082999	All Organisms → cellular organisms → Bacteria → Proteobacteria	1498	Open in IMG/M
3300010304\|Ga0134088_10347394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	720	Open in IMG/M
3300010336\|Ga0134071_10785224	Not Available	508	Open in IMG/M
3300010358\|Ga0126370_10027145	All Organisms → cellular organisms → Bacteria	3390	Open in IMG/M
3300010360\|Ga0126372_10553301	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300010361\|Ga0126378_11268527	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	833	Open in IMG/M
3300010376\|Ga0126381_100040777	All Organisms → cellular organisms → Bacteria	5630	Open in IMG/M
3300010399\|Ga0134127_10748274	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300010401\|Ga0134121_10535369	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300012189\|Ga0137388_10034513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3976	Open in IMG/M
3300012198\|Ga0137364_10893456	Not Available	672	Open in IMG/M
3300012685\|Ga0137397_10078502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2398	Open in IMG/M
3300012685\|Ga0137397_11203017	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012922\|Ga0137394_10915889	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300012922\|Ga0137394_11347658	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300012922\|Ga0137394_11484583	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012930\|Ga0137407_11007882	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	789	Open in IMG/M
3300012948\|Ga0126375_10366332	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300012971\|Ga0126369_11412659	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300012976\|Ga0134076_10276935	Not Available	722	Open in IMG/M
3300012976\|Ga0134076_10613429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300014969\|Ga0157376_10553222	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300015372\|Ga0132256_100055455	All Organisms → cellular organisms → Bacteria	3699	Open in IMG/M
3300015373\|Ga0132257_103479540	Not Available	573	Open in IMG/M
3300017997\|Ga0184610_1058074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1158	Open in IMG/M
3300018054\|Ga0184621_10029315	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300018056\|Ga0184623_10065836	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300018056\|Ga0184623_10509304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptothermofonsia → Leptothermofonsia sichuanensis	512	Open in IMG/M
3300018074\|Ga0184640_10126027	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300018075\|Ga0184632_10197731	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	885	Open in IMG/M
3300018077\|Ga0184633_10370909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	719	Open in IMG/M
3300021073\|Ga0210378_10245737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300021560\|Ga0126371_13672061	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300022534\|Ga0224452_1234465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	562	Open in IMG/M
3300025930\|Ga0207701_10378178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1222	Open in IMG/M
3300026118\|Ga0207675_101215244	Not Available	774	Open in IMG/M
3300026298\|Ga0209236_1200739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	755	Open in IMG/M
3300026333\|Ga0209158_1089213	All Organisms → cellular organisms → Bacteria → Proteobacteria	1190	Open in IMG/M
3300026537\|Ga0209157_1344160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300026547\|Ga0209156_10025176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3475	Open in IMG/M
3300027490\|Ga0209899_1107091	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300027533\|Ga0208185_1120863	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300027654\|Ga0209799_1052369	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300027907\|Ga0207428_10555543	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300027954\|Ga0209859_1026060	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300028380\|Ga0268265_10427060	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300030336\|Ga0247826_11495699	Not Available	547	Open in IMG/M
3300031682\|Ga0318560_10422174	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	722	Open in IMG/M
3300031720\|Ga0307469_10118071	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300031720\|Ga0307469_10462645	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1101	Open in IMG/M
3300031740\|Ga0307468_100884390	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300031768\|Ga0318509_10216011	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300031793\|Ga0318548_10222612	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031796\|Ga0318576_10294179	Not Available	767	Open in IMG/M
3300031944\|Ga0310884_10536214	Not Available	691	Open in IMG/M
3300031954\|Ga0306926_10195564	All Organisms → cellular organisms → Bacteria	2510	Open in IMG/M
3300032003\|Ga0310897_10667140	Not Available	519	Open in IMG/M
3300032180\|Ga0307471_103679390	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300034819\|Ga0373958_0095100	Not Available	692	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.58%
Host-Associated	Host-Associated	23.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.86%
Plants	Host-Associated → Plants	23.42%
Aquatic	Environmental → Aquatic	11.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.02%
Sediment	Environmental → Aquatic → Sediment	10.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.41%
Freshwater	Environmental → Aquatic → Freshwater	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.81%
Loam	Environmental → Terrestrial → Soil → Loam	8.11%
Sand	Environmental → Terrestrial → Soil → Sand	5.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.01%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.41%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_138749591	3300000363	Soil	IPVSIAMTLAAARAGRHALGTAPSEIVTNARAYADVGVDTLIISAGTSDPGEARAALEMVAREVLPAFRS*
INPhiseqgaiiFebDRAFT_1012455801	3300000364	Soil	TARAGRHALGTAPSEIVTNARAYADVGVDTLIISAGTSDPGEARAALEMVAREVLPAFRS
F24TB_103825762	3300000550	Soil	VSIAMTLAAAHAGRHALGTAPSEIVKNARAYADVGVETLIISAGTSDPGEARTALEMVAREVLPAFRS*
JGI10216J12902_1044232741	3300000956	Soil	RHALGTKPAEILKNARAYASLGVETLIISANTSDPREARAALDMIAREVAPALAG*
Ga0066398_100402612	3300004268	Tropical Forest Soil	EARACGRDAAKIPVSIAMTLAAARAGRHALGTGPSEIVKNARAYADVGVETLIISAGTSDPGEARAALEMVAREVLPAFRR*
Ga0066397_100835931	3300004281	Tropical Forest Soil	IPVSIAMSLAAARAGRHALGTKPAEIIKNARAYASLGIETLIISANTSEPREARSALEMIAREVAPAVVAG*
Ga0063356_1032111622	3300004463	Arabidopsis Thaliana Rhizosphere	AGRDVANIPVSIALSLAASRPGRYALGTDPTEIAQKANAFAALGVETLVVSANTSDPREARSAMEMVARAVLPELPRKPATT*
Ga0066676_100405274	3300005186	Soil	IPVSIAMSLGVSTPRRYALGKDPAEVVNNARAYASFGVQTLVISANTGDPIEARSALETIAREVLPAFA*
Ga0070668_1004406502	3300005347	Switchgrass Rhizosphere	AGRHALGTAPSEIVTNARAYADVGVDTLIISAGTSDPGEARAALEMVAREVLPAFRS*
Ga0070673_1010755602	3300005364	Switchgrass Rhizosphere	ARRYALGTEPAEVVHNVQAFASLGVETLVISATTSDAGEARAALEMVAREVLPAIRYA*
Ga0070703_102374872	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VSIAMSLAAARAGRHALGTKPAEIIQNAKAYASLGVETLIISANTSEPREARAALEMIARDVVPALAG*
Ga0070708_1014476361	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SQIPVSIALGLEAPETRRRYALGRDPAGILKNAQAYAKLGVDTLVISANTSDPREAHSTLEMIAREVRAAFPTD*
Ga0066686_101975843	3300005446	Soil	STRGRATLGRAPAEIVKHARAYAELGVETLAISAGTSDPKEARSALEMLALEVLPAIPGRGQ*
Ga0070707_1006361082	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AGRHALGTKPAEIVQNAKAYASLGVETLIVSANTSEPREARSALEMIAREVSPAVRA*
Ga0070698_1005999592	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ATARAGRHALGTKPAEIVQNAKAYASLGVETLIVSANTSEPREARSALEMIAREVSPAVRA*
Ga0070699_1010440181	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSIAMSLATARAGRHALGTKPAEIVQNAKAYASLGVETLIVSANTSEPREARSALEMIAREVSPAVRA*
Ga0066692_100945593	3300005555	Soil	EEARACGRDMSKIPVSIAMSLATARAGRHALGTKPAEIVQNAKAYASLGVETLIVSANTSEPREARSALEMIAREVSPAIRG*
Ga0066698_101856053	3300005558	Soil	MSKIPVSIAMSLATARAGRHALGTKPAEIVQNAKAYASLGVETLIVSANTSEPREARSALEMIAREVSPAIRG*
Ga0066706_104229332	3300005598	Soil	VSIAMSLAAARAGRHALGTKPAEIIKNAKAYASLGVETLIISANTSEPREARSALEMIAREVSPALTG*
Ga0068861_1003705023	3300005719	Switchgrass Rhizosphere	IPVSIAMSLAAARAGRHALGTKPAEIIQNAKAYASLGVETLIISANTSEPREARAALEMIARDVVPALAG*
Ga0068862_1013115503	3300005844	Switchgrass Rhizosphere	GRHALGTKPAEIIQNAKAYASLGVETLIISANTSEPREARAALEMIARDVVPALAG*
Ga0066656_103478921	3300006034	Soil	GSKIPVSIAMTLATARAGRYALGTAPSEIVKNARAYADVGVETLIVSAGTSDPGEARAALEMVGREVLPAFRS*
Ga0066656_106376223	3300006034	Soil	QGIALLRTEAQSHGRDVSKIPVSIAMSLGVSTPRRYALGKDPAEVVNNARAYASFGVQTLVISANTGDPIEARSALETIAREVLPAFA*
Ga0075428_1016411112	3300006844	Populus Rhizosphere	AGRDAATIPISIAMSLAAARAGRHALGTKPAEIIKNAKAYATLGVETLIISATTSEPREARSSLEMIAREVAPALAG*
Ga0075428_1025061451	3300006844	Populus Rhizosphere	EAQACGRDESAIPVSIAMSLATARAGRHALGTKPAEIIQNARAYAGLGVETLIISATTSEPREAGAALEMIAREVVPALAG*
Ga0075433_103813743	3300006852	Populus Rhizosphere	VSIAMTLAAARAGRHALGTGPSEIVKNARAYADVGVETLIISAGTSDPVEARAALEMVAREVLPAFRG*
Ga0075433_107909891	3300006852	Populus Rhizosphere	EAARVPVSIAMSITASTPRRFALGTAPPEIVKNAKAYASAGVETLIISANTSEPREAQSTLEMIAREVVPAVR*
Ga0075433_117201571	3300006852	Populus Rhizosphere	LGLEAPETRRRYALGRDPAGILKNAQAYAKLGVDTLVISANTSDPREAHSTLEMIAREVRAAFPTD*
Ga0075420_10001403112	3300006853	Populus Rhizosphere	RAGRHALGTKPAEIIKNAKAYASLGVETLIISATTSEPRGARSALEMIAREVAPALAG*
Ga0075425_1006122771	3300006854	Populus Rhizosphere	KIPVSIAMTLAAARAGRHALGTGPSEIVKNARAYADVGVETLIISAGTSDPVEARAALEMVAREVLPAFRG*
Ga0075434_1004957221	3300006871	Populus Rhizosphere	IPVSIAMTLAAARAGRHALGTGPSEIVKNARAYADVGVETLIISAGTSDPVEARAALEMVAREVLPAFRG*
Ga0075434_1009821113	3300006871	Populus Rhizosphere	RVPVSIAMSITASTPRRFALGTAPAEIVKNAKAYASAGVETLIISANTSEPREAQSTLEMIAREVVPAVR*
Ga0075436_1002506801	3300006914	Populus Rhizosphere	RAGRHALGTKPAEIIQNAKAYAGLGVETLIISANTSEPREARAALEMIARDVVPALAS*
Ga0075435_1000593311	3300007076	Populus Rhizosphere	LAAARAGRHALGTGPSEIVKNARAYADVGVETLIISAGTSDPVEARAALEMVAREVLPAFRG*
Ga0099793_105362461	3300007258	Vadose Zone Soil	LRDEARACGRDGAKIPVSIAMTLATARAGRYALGTAPSEIVKNARAYADVGVETLIVSAGTSDPGEARAALEMVGREVLPAFRS*
Ga0066710_1001607241	3300009012	Grasslands Soil	GLAQLREEARACGRDMSKIPVSIAMSLATARAGRHALGTKPAEIVQNAKAYASLGVETLIVSANTSEPREARSALEMIAREVSPAIRG
Ga0114129_119059323	3300009147	Populus Rhizosphere	ALSLTASTSRRYALGTEPAEVVRNVQAFASLGVETLVISATTGDPGEARAAMEMVARDVLSANR*
Ga0075423_117072181	3300009162	Populus Rhizosphere	LGLSPDALADGMAILREEALACGRDVATVPVSIAMSIAASTPRRHALGTTPVEIIRNAKAYAAVGVDTLVVSANTSEPREAQTALEMIARQVVPAL*
Ga0075423_129455931	3300009162	Populus Rhizosphere	MSLAAARAGRHALGTKPAEIIKNAKAYASLGVETLIISANTSDPREARSALEMVAREVAPALAS*
Ga0105063_10177151	3300009804	Groundwater Sand	GLSPEALGQGIASLRTEAQACGRDVSKIPVSIAMSLGVATTRRYALGKDPAEVVNNAKAYASLGVQTLVISANTGDPTEARSALEMIAREVLTAIPREP*
Ga0105070_10429171	3300009815	Groundwater Sand	LGLSPEALGQGIAALREEARACDRDVSKIPISIAMSLAPSRLGRHALGTEPSEIVKNARAYASLGVETLVISANTGDPGEARSALEMVARDVLPAFRS*
Ga0105087_10372813	3300009819	Groundwater Sand	SPEALGQGIAALREEARACGRDVRSIPISIAMSLATARLGRYALGTKPAEIVKNAEAYASLGVETLVISANTGDPGEARAALEMLGREVLPAFRL*
Ga0126380_101718293	3300010043	Tropical Forest Soil	MSLAAARAWRHALGTKPTEIIKNARTYAGLGVETLIISANTSESQEARAALEMITCDVVLALAS*
Ga0126380_103811933	3300010043	Tropical Forest Soil	AKIPVSIAMSLAAARAGRHALGATPAEIVKNARAYASLGVDTLIISANTSEPREARSALDMIARDVAPALAG*
Ga0126384_100195951	3300010046	Tropical Forest Soil	AKIPVSIAMSLAAARAWRHALGTKPTEIIKNARTYAGLGVETLIISANTSESQEARAALEMITCDVVLALAS*
Ga0134088_100829993	3300010304	Grasslands Soil	MSFGASTSRRHALGKDPAEVVNNAKAYASLGVQTLVISANTGDPGEARSALETIAREVLPAFA*
Ga0134088_103473941	3300010304	Grasslands Soil	PLGLSPEALEQAMAMLREEARACGRDVTKVPVSIAMSLGASTPRRAALGRDPAEIVKNAKAYAALGVETLVISAHTSDPGEARSAMEMVAREVLAAISR*
Ga0134071_107852241	3300010336	Grasslands Soil	EALGQSMATLRDEARACGRDAAKIPVSIAMTLGASTRGRATLGRAPAEIVKHARAYAELGVETLAISAGTSDPKEARSALEMLARKVLPAIPERGQ*
Ga0126370_100271451	3300010358	Tropical Forest Soil	VPVSITMPLSEARPRRHALGTAPAEVVRNARAFADLGVDTLIVSPTTSDPAEARAALEMLAHEVLPVVR*
Ga0126372_105533011	3300010360	Tropical Forest Soil	HGRDIASIPVSVALGVGAPGARGRHALGTERAQIAGNAKAYADLGVDTLIVSANTSDPAQARRILEMIAREVPNQ*
Ga0126378_112685273	3300010361	Tropical Forest Soil	RAWRHALGTKPTEIIKNARTYAGLGVETLIISANTSESQEARAALEMITCDVVLALAS*
Ga0126381_1000407777	3300010376	Tropical Forest Soil	VGREAAKIPVSIAMSLAAARAWRHALGTKPTEIIKNARTYAGLGVETLIISANTSESQEARAALEMITCDVVLALAS*
Ga0134127_107482743	3300010399	Terrestrial Soil	RAGRHALGTKPAEIIQNAKAYASLGVETLIISANTSEPREARAALEMIARDVVPALAG*
Ga0134121_105353691	3300010401	Terrestrial Soil	RDAAKIPVSIAMSLAAARAGRHALGTKPAEIIQNAKAYASLGVETLIISANTSEPREARAALEMIARDVVPALAG*
Ga0137388_100345131	3300012189	Vadose Zone Soil	QACGRDVSKIPVSIAMSLATSRLDRHALGTKPAEIVQNARAYASLGVETLIVSANTSDPREARSALEMVAREVSPALAG*
Ga0137364_108934561	3300012198	Vadose Zone Soil	GRDAAKVPVSIAMSITASTPRRAALGTEPAEIVGNAKAYAALGVETLIVSANTSDPREAQTAMEMIAREVLASVSR*
Ga0137397_100785021	3300012685	Vadose Zone Soil	AKIPVSIAMSLAAARAGRHALGTKPAEIIKNAKAYASLGVDTLIISANTSDPREARSALEMIAREVAPALAG*
Ga0137397_112030171	3300012685	Vadose Zone Soil	AKIPVSIAMSLAAARAGRHALGTKPAEIIKNAKAYASLGVETLIISANTSDPREARTALEMIAREVSPALAG*
Ga0137394_109158893	3300012922	Vadose Zone Soil	ACGRDLAKIPVSIAMSLTASTPRRHALGTRPDEIVRNAQAFAAVGVDTLVISANTSDPGEARTDLEMIARDVLPAFPG*
Ga0137394_113476581	3300012922	Vadose Zone Soil	PTPRRHALGTAPADVVQNVKAFASLGVETLVISATTSDPGEARDALDLVAREVLPITL*
Ga0137394_114845831	3300012922	Vadose Zone Soil	AKIPVSIAMSLAAARAGRHALGTKPAEIIKNAKAYASLGVETLIISANTSDPREARSALEMIAREVAPALAS*
Ga0137407_110078822	3300012930	Vadose Zone Soil	LGQGITALREEARACGRDVSKIPISIAMSLATSRLGRHALGTEPSGIVKNARAYASLGVETLVISANTDDPGEARSALEMVARDVVPAFRS*
Ga0126375_103663321	3300012948	Tropical Forest Soil	RACGRDAAKIPVSIAMTLAAARARRHALGTAPSEIVKNACAYADVGVDTLIISAGTSDPGEARAALEMVAREVLPAFRR*
Ga0126369_114126592	3300012971	Tropical Forest Soil	ACGRDAAKIPVSIAMTLAAARAGRHALGTGPSEIVKNARAYADVGVETLIISAGTSDPGEARAALEMVAREVLPAFRR*
Ga0134077_103163641	3300012972	Grasslands Soil	LGVSTPRRYALGKDPAEVVNNAKAYASLGVQTLVISANTGDPTEARSALEMIAREVLTAIPREPSAT*
Ga0134076_102769352	3300012976	Grasslands Soil	MSLAAARAGRHALGTKPAEIIKNAKAYASLGVETLIISANTSDPREARSALEM
Ga0134076_106134292	3300012976	Grasslands Soil	PEALGQGIALLRTEAQACGRDVSTIPVSIAMSLGVSTPRRYALGKDPAEVVNNAKAYASLGVQTLVISANTGDPGEARSALETIAREVLPAFA*
Ga0157376_105532221	3300014969	Miscanthus Rhizosphere	RAAGRDAATIPVSIAMSLAAARAGRHALGTKPAEIIKNAKAYAGHGVDTLIVSANTSEPREAMSALEMIARDVVPALAGP*
Ga0132256_1000554555	3300015372	Arabidopsis Rhizosphere	QLRAEAQASGRDVSTIPISIAMSLATARAGRHALGTKPAEIVHNAKAYASLGVETLIISATTSEPREARSSLEMIAREVAPAIAS*
Ga0132257_1034795402	3300015373	Arabidopsis Rhizosphere	SIAMSLATARAGRHALGTKPAEIVHNAKAYASLGVETLIISATTSEPREARSLLEMIAREVAPAIAS*
Ga0184610_10580742	3300017997	Groundwater Sediment	QGIALLRTEAQSYGRDVSTIPVSIAMSLGVSTPRRYALGKDPAEVVQNAKAYASLGVQTLVISANTGDPTEARSALETIAREVLTAIPREPSAT
Ga0184634_100712561	3300018031	Groundwater Sediment	EATPRRFALGKEPAEIVRNAKAFAAVGVETLLISATTTDPGEARSALEMVGREVLPAIV
Ga0184626_102237383	3300018053	Groundwater Sediment	GGATPRRFALGKDPAEIVRNAKAFAAVGVETLLISATTSDPGEARSALELVGREVLPALG
Ga0184621_100293155	3300018054	Groundwater Sediment	REEARACGRDAAKIPVSIAVSLGEATPRRFALGRDPAEIVRNAKAFAAVGVETLLISATTSDPGEARSALELVGREVLPALG
Ga0184623_100658365	3300018056	Groundwater Sediment	GQAIASLREEARAHGRDAARIPVSIAMSLGEATPRRFALGRDPVEIVRNAKAFAAVGVETLLISATTSDPGEARSALELVGREVLPALG
Ga0184623_105093042	3300018056	Groundwater Sediment	GQAIASLREEARAHGRDAARIPVSIAMSLGEATPRRFALGKDPAEIVRNAKAFAAGGVETLLVSATTTDPGEARSALEMVGREVLPALG
Ga0184637_107388322	3300018063	Groundwater Sediment	DVSTIPVSIAMSLGVSTPRRYALGKDPAEVVNNAKAYASLGVQTLVISANTGDPTEARSALEMIEREVLTAIPREPSAT
Ga0184640_101260272	3300018074	Groundwater Sediment	QSYGRDVSTIPVSIAMSLGVSTPRRYALGKDPAEVVQNAKAYASLGVQMLVISANTGDPTEARSALETIAREVLTAIPREPSAT
Ga0184632_101977313	3300018075	Groundwater Sediment	GRDVAKIPVSIAMSLAASTPRRYALGTKPDEIVRNAQAFAAAGVDTLVISANTSDPGVARTALEMVARKVLPAFPN
Ga0184633_103709091	3300018077	Groundwater Sediment	AAGRDVATIPVSIALSLAASRPGRFALGTDPAEIAGHAKAFEALGVETLIVSGNTSDPAEARTAMERVARALFP
Ga0210378_102457372	3300021073	Groundwater Sediment	ALGQGITALREEARACGRDVSKIPISIAMSLATSRLGRHALGAKPSEIVKNARAYASLGVETLVISANTGDPGEARSALEMVARDVLPAFRS
Ga0126371_136720612	3300021560	Tropical Forest Soil	ARAGRHALGTRPAEIIKNAKAYASLGVDTLIVSANTSEPRQARSALEMIARDVVPALAG
Ga0224452_12344651	3300022534	Groundwater Sediment	GLSPEALGQGITALREEARACGRDVSKIPISIAMSLATSRLGRHALGTEPSEIVKNARAYASLGVETLVISANTGDPGEARTALEMVARDVLPAFRS
Ga0207701_103781783	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	AMTLAAARAGRHALGTAPSEIVTNARAYADVGVDTLIISAGTSDPGEARAALEMVAREVLPAFRS
Ga0207675_1012152443	3300026118	Switchgrass Rhizosphere	KIPVSIAMSLAAARAGRHALGTKPAEIIQNAKAYASLGVETLIISANTSEPREARAALEMIARDVVPALAG
Ga0209236_12007392	3300026298	Grasslands Soil	KIPISIAMSLATSRLGRHALGTEPSGIVKNARAYASLGVETLVISANTDDPGEARSALEMVARDVVPAFRS
Ga0209158_10892131	3300026333	Soil	VSIAMSLATARAGRHALGTKPAEIVQNAKAYASLGVETLIVSANTSEPREARSALEMIAREVSPAIRG
Ga0209157_13441601	3300026537	Soil	GQGIALLRTEAQSYGRDVSKIPVSIAMSFGASTSRRHALGKDPAEVVNNAKAYASLGVQTLVISANTGDPGEARSALETIAREVLPAFA
Ga0209156_100251761	3300026547	Soil	EARAVGRDAAKIPVSIAMSLAAARAGRHALGTKPAEILKNAKAYATLGVETLIISANTSDPREARSALEMIAREVSPALAG
Ga0209861_10108183	3300027332	Groundwater Sand	IPVSIAMSLGVSTSRRYALGKDPAEIVQNAKAYANLGVQTLVISANTGDPREARSAIEMVAREVLPAFRA
Ga0209899_11070911	3300027490	Groundwater Sand	AALREEARACDRDVSKIPISIAMSLAPSRLGRHALGTEPSEIVKNARAYASLGVETLVISANTGDPGEARSALEMVARDVLPAFRS
Ga0208185_11208632	3300027533	Soil	ARPGRHALGTKPAEIIENAKAYASVGVDTLVISANTGDPHEAGAALEMVAREVVPALR
Ga0209799_10523691	3300027654	Tropical Forest Soil	ARACGRDAAKIPVSIAMTLAAARAGRHALGTGPSEIVKNARAYADVGVETLIISAGTSDPGEARAALEMVAREVLPAFRR
Ga0207428_105555431	3300027907	Populus Rhizosphere	EARACSRDAAKIPVSIAMTLAAARAGRHALGTGPSEIVKNARAYADVGVETLIISAGTSDPGEARAALEMVAREVLPAFRS
Ga0209859_10260602	3300027954	Groundwater Sand	ALREEARACDRDVSKIPISIAMSLAPSRLGRHALGTEPSEIVKNARAYASLGVETLVISANTGDPGEARSALEMVARDVLPAFRS
Ga0268265_104270601	3300028380	Switchgrass Rhizosphere	AAARAGRHALGTKPAEIIQNAKAYASLGVETLIISANTSEPREARAALEMIARDVVPALA
Ga0307312_108745111	3300028828	Soil	RFALGTRPDEVVRSARAYAAAGVETLVISANTSDPGAARAALEMVAREVLPAVR
Ga0247826_114956991	3300030336	Soil	TSRRHALGTKPAEILGHARAFAGVGVDTLVISITTSDPREARAALEMVAREILPAFPSERQGS
Ga0318560_104221742	3300031682	Soil	MSLAAARAGRHALGTRPAEIVKNAKAYANLGVETLIVSANTSEPREARSALEMIARDVVPALAG
Ga0307469_101180711	3300031720	Hardwood Forest Soil	LATARGGRYALGTAPSEIVKNARAYADVGVETLIVSAGTSDPGEARAALEMVGREVLPAFLIR
Ga0307469_104626451	3300031720	Hardwood Forest Soil	ALGQGIAALRDEARACGRDAARIPVSIAMTLATARAGRHALGTAPSEIVKNATAYADVGVETLIISAGTSDPGEARTALEMVARDVLPAFPS
Ga0307468_1008843901	3300031740	Hardwood Forest Soil	IAMTLAAARAGRHALGTGPSEIVKNARAYADVGVETLIISAGTSDPVEARAALEMVAREVLPAFRG
Ga0318509_102160113	3300031768	Soil	SLAAARAGRHALGTRPAEIVKNAKAYAGLGVETLIVSANTSEPREARAALEMIARDVVPALAG
Ga0318548_102226121	3300031793	Soil	LAAARAGRHALGTRPAEIVKNAKAYANLGVETLIVSANTSEPREARSALEMIARDVVPALAG
Ga0318576_102941793	3300031796	Soil	AASDIAIDTKPAEIIKNARAYASLGVETLIISANTSAPREARAALEMIAREVAPAAAG
Ga0310884_105362142	3300031944	Soil	SGRDVSKIPISIAMSLATARAGRHALGTKPAEIVHNAKAYASLGVETLIISATTSEPREARSALEMIAREVAPAIAS
Ga0306926_101955644	3300031954	Soil	KIPVSIAMSLAAARAGRHALGTRPAEIVKNAKAYANLGVETLIVSANTSEPREARSALEMIARDVVPALAG
Ga0310897_106671401	3300032003	Soil	ISIAMSLATARAGRHALGTKPAEIVHNAKAYASLGVETLIISATTSEPREARSALEMIAREVAPAIAS
Ga0307471_1006946132	3300032180	Hardwood Forest Soil	ALGTKPAEIIKNAKAYARLGVETLIISATTSEPREARSSLEMIAREVAPALAS
Ga0307471_1036793901	3300032180	Hardwood Forest Soil	DAAKIPVSIAMTLAAARAGRHALGTAPSEIVTNARAYADVGVDTLIISAGTSDPGEARAALEMVAREVLPAFRS
Ga0373958_0095100_10_204	3300034819	Rhizosphere Soil	MSLATARAGRHALGTKPAEIVHNAKAYASLGVETLIISATTSEPREARSALEMIAREVAPAIAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085310

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences