Metagenome / Metatranscriptome Family F085296

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085296
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	87 residues
Representative Sequence	MNEQFDGDAISRADREFLASLDDHPLMRHPLYSVPPPPRPNYDGCTTIAEKQTAQEMCFPAALDWMLVNYAYYAGAFVGKGGII
Number of Associated Samples	70
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.10 %
% of genes near scaffold ends (potentially truncated)	97.30 %
% of genes from short scaffolds (< 2000 bps)	93.69 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (91.892 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.045 % of family members)
Environment Ontology (ENVO)	Unclassified (80.180 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.450 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.89% β-sheet: 0.00% Coil/Unstructured: 49.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00176	SNF2-rel_dom	2.70
PF10926	DUF2800	1.80
PF00476	DNA_pol_A	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.89 %
All Organisms	root	All Organisms	8.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.89 %
cellular organisms	root	All Organisms → cellular organisms	8.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.41 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.89 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.89 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	2.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZTSFBX01EN399	Not Available	519	Open in IMG/M
3300000955\|JGI1027J12803_109199315	Not Available	1292	Open in IMG/M
3300005164\|Ga0066815_10112415	Not Available	522	Open in IMG/M
3300005332\|Ga0066388_102422330	Not Available	952	Open in IMG/M
3300005332\|Ga0066388_102427358	Not Available	951	Open in IMG/M
3300005332\|Ga0066388_102993133	Not Available	863	Open in IMG/M
3300005363\|Ga0008090_10023178	Not Available	682	Open in IMG/M
3300005764\|Ga0066903_101459717	Not Available	1289	Open in IMG/M
3300005764\|Ga0066903_102994558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	915	Open in IMG/M
3300005764\|Ga0066903_105273917	Not Available	683	Open in IMG/M
3300006845\|Ga0075421_101977410	Not Available	622	Open in IMG/M
3300009092\|Ga0105250_10580489	Not Available	517	Open in IMG/M
3300010047\|Ga0126382_10557845	Not Available	934	Open in IMG/M
3300010047\|Ga0126382_10734484	Not Available	833	Open in IMG/M
3300010359\|Ga0126376_11851610	Not Available	642	Open in IMG/M
3300010360\|Ga0126372_12095064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300010362\|Ga0126377_12258558	Not Available	620	Open in IMG/M
3300010376\|Ga0126381_101585370	Not Available	946	Open in IMG/M
3300012957\|Ga0164303_11488014	Not Available	511	Open in IMG/M
3300013306\|Ga0163162_10402656	Not Available	1501	Open in IMG/M
3300016294\|Ga0182041_10201873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1584	Open in IMG/M
3300016294\|Ga0182041_10352938	Not Available	1237	Open in IMG/M
3300016294\|Ga0182041_10562621	Not Available	997	Open in IMG/M
3300016294\|Ga0182041_11168506	Not Available	701	Open in IMG/M
3300016341\|Ga0182035_11125750	Not Available	699	Open in IMG/M
3300016357\|Ga0182032_10199209	Not Available	1523	Open in IMG/M
3300016371\|Ga0182034_11369677	Not Available	618	Open in IMG/M
3300016371\|Ga0182034_11623636	Not Available	568	Open in IMG/M
3300016387\|Ga0182040_10790303	Not Available	781	Open in IMG/M
3300016404\|Ga0182037_10326501	Not Available	1242	Open in IMG/M
3300016404\|Ga0182037_10773736	Not Available	826	Open in IMG/M
3300016445\|Ga0182038_10220315	Not Available	1507	Open in IMG/M
3300016445\|Ga0182038_11433216	Not Available	619	Open in IMG/M
3300022756\|Ga0222622_11379429	Not Available	519	Open in IMG/M
3300025901\|Ga0207688_10976937	Not Available	535	Open in IMG/M
3300031543\|Ga0318516_10854517	Not Available	513	Open in IMG/M
3300031546\|Ga0318538_10285791	Not Available	888	Open in IMG/M
3300031561\|Ga0318528_10711145	Not Available	537	Open in IMG/M
3300031668\|Ga0318542_10109467	Not Available	1342	Open in IMG/M
3300031679\|Ga0318561_10421654	Not Available	734	Open in IMG/M
3300031679\|Ga0318561_10816250	Not Available	512	Open in IMG/M
3300031680\|Ga0318574_10764791	Not Available	566	Open in IMG/M
3300031681\|Ga0318572_10218567	Not Available	1116	Open in IMG/M
3300031682\|Ga0318560_10400320	Not Available	743	Open in IMG/M
3300031682\|Ga0318560_10827174	Not Available	500	Open in IMG/M
3300031719\|Ga0306917_10520701	Not Available	934	Open in IMG/M
3300031719\|Ga0306917_11409114	Not Available	537	Open in IMG/M
3300031724\|Ga0318500_10006929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3741	Open in IMG/M
3300031744\|Ga0306918_10339034	Not Available	1165	Open in IMG/M
3300031744\|Ga0306918_10555598	Not Available	899	Open in IMG/M
3300031744\|Ga0306918_11049942	Not Available	632	Open in IMG/M
3300031744\|Ga0306918_11060000	Not Available	629	Open in IMG/M
3300031763\|Ga0318537_10311213	Not Available	582	Open in IMG/M
3300031765\|Ga0318554_10619487	Not Available	609	Open in IMG/M
3300031770\|Ga0318521_11002761	Not Available	512	Open in IMG/M
3300031771\|Ga0318546_10360708	Not Available	1012	Open in IMG/M
3300031778\|Ga0318498_10504352	Not Available	533	Open in IMG/M
3300031781\|Ga0318547_10179391	Not Available	1258	Open in IMG/M
3300031781\|Ga0318547_10515384	Not Available	739	Open in IMG/M
3300031782\|Ga0318552_10247733	Not Available	904	Open in IMG/M
3300031782\|Ga0318552_10590240	Not Available	567	Open in IMG/M
3300031796\|Ga0318576_10582290	Not Available	527	Open in IMG/M
3300031798\|Ga0318523_10447745	Not Available	640	Open in IMG/M
3300031798\|Ga0318523_10550489	Not Available	569	Open in IMG/M
3300031799\|Ga0318565_10304681	Not Available	774	Open in IMG/M
3300031821\|Ga0318567_10476793	Not Available	708	Open in IMG/M
3300031821\|Ga0318567_10598655	Not Available	626	Open in IMG/M
3300031821\|Ga0318567_10716837	Not Available	567	Open in IMG/M
3300031833\|Ga0310917_11079780	Not Available	536	Open in IMG/M
3300031845\|Ga0318511_10412052	Not Available	620	Open in IMG/M
3300031846\|Ga0318512_10533023	Not Available	596	Open in IMG/M
3300031879\|Ga0306919_10030518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3394	Open in IMG/M
3300031879\|Ga0306919_10313904	Not Available	1192	Open in IMG/M
3300031879\|Ga0306919_10368921	Not Available	1098	Open in IMG/M
3300031879\|Ga0306919_10704149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	778	Open in IMG/M
3300031879\|Ga0306919_10746484	Not Available	753	Open in IMG/M
3300031890\|Ga0306925_10009625	Not Available	9210	Open in IMG/M
3300031890\|Ga0306925_10059044	All Organisms → cellular organisms → Bacteria	4015	Open in IMG/M
3300031890\|Ga0306925_10553482	Not Available	1219	Open in IMG/M
3300031890\|Ga0306925_11286111	Not Available	728	Open in IMG/M
3300031890\|Ga0306925_12116588	Not Available	526	Open in IMG/M
3300031912\|Ga0306921_10005266	All Organisms → cellular organisms → Bacteria	13394	Open in IMG/M
3300031912\|Ga0306921_10356805	Not Available	1709	Open in IMG/M
3300031912\|Ga0306921_11566949	Not Available	717	Open in IMG/M
3300031941\|Ga0310912_11248781	Not Available	564	Open in IMG/M
3300031945\|Ga0310913_10432947	Not Available	934	Open in IMG/M
3300031947\|Ga0310909_10050314	Not Available	3200	Open in IMG/M
3300031947\|Ga0310909_10284058	Not Available	1385	Open in IMG/M
3300031947\|Ga0310909_10320202	Not Available	1301	Open in IMG/M
3300031947\|Ga0310909_11146416	Not Available	630	Open in IMG/M
3300031954\|Ga0306926_10013654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	9111	Open in IMG/M
3300031954\|Ga0306926_10310949	Not Available	1950	Open in IMG/M
3300031954\|Ga0306926_12444756	Not Available	574	Open in IMG/M
3300031981\|Ga0318531_10569081	Not Available	513	Open in IMG/M
3300032001\|Ga0306922_11095261	Not Available	817	Open in IMG/M
3300032009\|Ga0318563_10705032	Not Available	542	Open in IMG/M
3300032010\|Ga0318569_10448617	Not Available	601	Open in IMG/M
3300032025\|Ga0318507_10165372	Not Available	950	Open in IMG/M
3300032025\|Ga0318507_10499908	Not Available	529	Open in IMG/M
3300032035\|Ga0310911_10513687	Not Available	694	Open in IMG/M
3300032059\|Ga0318533_10199805	Not Available	1431	Open in IMG/M
3300032059\|Ga0318533_10418585	Not Available	979	Open in IMG/M
3300032059\|Ga0318533_11239226	Not Available	545	Open in IMG/M
3300032063\|Ga0318504_10193950	Not Available	947	Open in IMG/M
3300032065\|Ga0318513_10606716	Not Available	536	Open in IMG/M
3300032066\|Ga0318514_10351567	Not Available	781	Open in IMG/M
3300032076\|Ga0306924_10549832	Not Available	1310	Open in IMG/M
3300032089\|Ga0318525_10456647	Not Available	654	Open in IMG/M
3300032261\|Ga0306920_100837638	Not Available	1348	Open in IMG/M
3300032261\|Ga0306920_103787493	Not Available	553	Open in IMG/M
3300033290\|Ga0318519_10296212	Not Available	946	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.40%
Host-Associated	Host-Associated	3.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.50%
Plants	Host-Associated → Plants	3.60%
Aquatic	Environmental → Aquatic	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.80%
Sediment	Environmental → Aquatic → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.09%
Loam	Environmental → Terrestrial → Soil → Loam	5.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	80.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_02644210	2170459024	Grass Soil	MNEHCTPEADRNTFDGDAISRADREFLASLSDHPLVRHPLYSVPPPPRPNYEGCITIDERAEAQRACFPAALDWMLVNYAYYTG
JGI1027J12803_1091993153	3300000955	Soil	RADREFLASLGDHRLARHPLYSVPPPPRPDYAGCTTIDARAEAQRACFPAALDWMLVNYAYTTDAFMGKG
Ga0066815_101124152	3300005164	Soil	MNEHSTPRAGPNTFDGDAISRADREFLASLGDHPLVRHPLYSVPPPPRPNYDGCTTIYERTEAQLACFPAALDWMLVNHAYYTDAFMGKGGIISL
Ga0066388_1024223302	3300005332	Tropical Forest Soil	MNEPFDGDAISRADWEFLASLGNHPLVRHPLYSVSPPPRPNYDGCITIAERQTAQEMCFPAALDWMLVNYAYYSGAFM
Ga0066388_1024273581	3300005332	Tropical Forest Soil	MTDAFDGDAVSRADREFLDSLNNHPLMRHPLYSVPPPPRPDYRGCATVAERADRQKACFPAALDWMLVNYAYYADAFMGKGGIISLVDGKIGT
Ga0066388_1029931331	3300005332	Tropical Forest Soil	MNEHCAPEANCNTFDGDAISRADREFLASLSDHPLVRHPLYSVPPPPRPNYDGCTTIDERAEAQKVCFPAALDWMLVNYAYYTDAFIGKGGI
Ga0008090_100231781	3300005363	Tropical Rainforest Soil	MQDRSTLPEAGAETFDGDAISRADREFLAKLGDHPLMRDPRYSAPPPPRPDYTGCTTLDDRTAAQIACFPAALDWMLV
Ga0066903_1014597171	3300005764	Tropical Forest Soil	MNEHRTPEASPNTFDGDAISRADREFLASLGDHSLVRHPLYSVPPPPRPNYEGCTTIAEKQTAQEMCFPAALDWMLVNYAYY
Ga0066903_1029945581	3300005764	Tropical Forest Soil	MNEHRTSEASPNTFDGDAISRADREFLASLSDHPLMRHPLYSVPPPPRPNYEGCITIAERQTAQEMCFPAALDWMLVNYAYY
Ga0066903_1052739172	3300005764	Tropical Forest Soil	MNEHCTPEANRDTFDGDAISRADREFLASLSDHPLVRHPLYSVPPPPRPNYDGCTTIDERAEAQKVCFPAALDWMLVNYAYYTDAFIGKGGI
Ga0075421_1019774102	3300006845	Populus Rhizosphere	MNEHCTPEANRNTFDGDAISRADREFLASLSDHPLVQHPLYSIPPPPRPNYEGCITIDERAEAQRACFPAAVDWMLVNYAYYTGAFIGKGGI
Ga0105250_105804891	3300009092	Switchgrass Rhizosphere	MNEHCTPEANRNTLDGDAISRADREFLASLSDHPLMRHPLYSAPPPPRPDYDGCTTIDDRTEAQKACFPAALDWML
Ga0126382_105578451	3300010047	Tropical Forest Soil	MTDAFDGDAVSRADRGFLDSLNNHPLMQHPLYSVPPPPRPNYSGCATVAERQTAQEMCFPAALDWMLVNYAYYSGAFMGKGGIISLVDGK
Ga0126382_107344842	3300010047	Tropical Forest Soil	MNEHCAPEANRNTFDGDAISRADREFLASLSDHPLVRHPLYSVPPPPRPNYDGCTTIDERAEAQKVCFPAALDWMLVNYAYYTDAFIGKGGIISWLTAR*
Ga0126376_118516102	3300010359	Tropical Forest Soil	MNEQNRNTFDGDAISQADREFLVSLDDHPLMRHPRYSVPPPPRPNYDGCITIAEKQTAQEMCFPAALESMLVNYAYYSGAFMGKGGIISLVE
Ga0126372_120950642	3300010360	Tropical Forest Soil	MTDAFDGDAVSRADREFLDSLNNHPLMRHPLYSVPPPPRPDYRGCATVAERADRQKACFPAALDWMLVNYAY
Ga0126377_122585581	3300010362	Tropical Forest Soil	MNEQNRNTFDGDAISQADREFLVSLDDHPLMRHPRYSVPPPPRPDYNGCVTITERQTAQEMCFPAVLDWML
Ga0126381_1015853702	3300010376	Tropical Forest Soil	MNEHCTPEANRNTFDGDAISRADREFLASLGDHPLVRLPLYSVAAPPRPNYDGCITIAERQTAQEMCFPAALDWMLVNYAFYAGAFMGKGGIISLVDGKIG
Ga0164303_114880141	3300012957	Soil	MSDVFDGDAISRADREFLTSLSDHPLARHPLYSVPPPPRPDYSGCTTVDDRTKAQEACFPAALDWLLVNYAY
Ga0163162_104026563	3300013306	Switchgrass Rhizosphere	MSKPFDGDAISRADREFLASLSDHPLARHPLYSVPPPPRPNYDGCTTVSESTEAQKACFPAALDWMLVNYAY*
Ga0182041_102018731	3300016294	Soil	MNKNNTAEANCDTFDGDAISRADREFLASLSDHPLAQHPLYSVPPPPRPDYAGCMTIADRQAAQQACFIPALDWVLVN
Ga0182041_103529381	3300016294	Soil	MSAFDGEAISKADREFLDGLSNHPLMRHPLYSVPPPPRPNYSGCTTIAEKTAKQIACFPAALDWMLINYAYY
Ga0182041_105626211	3300016294	Soil	MNEQFDGDAISRADREFLASLDDHPLMRHPLYSVPPPPRPNYDGCTTIAEKQTAQEMCFP
Ga0182041_111685062	3300016294	Soil	MNKHHTLEANHNTFDGDAISRADREFLASLGDHPLMRHPLYSVPPPPRPNYDGCITIAERQTAQEMCFPAALDWMLVNYAYYAGA
Ga0182035_111257502	3300016341	Soil	MTDTFDGDAVSRADREFLDSLDNHPLIQHPLYSVPPPPRPDYAGCTTAAERTARQRACFPAALDWMLINYAYYADAFMGKGGIISLVDGKIG
Ga0182032_101992091	3300016357	Soil	MSEPHPAVTTATFDGEAISRADREFLKSLGDHPLARHPLYSVPPPPRPNYEGCTTSADRQAAQKTCFPAALDWLLVNYAYYTGAFIAKGGVISLVDG
Ga0182034_113696771	3300016371	Soil	MNEPRPAVTTAPFDGEAISRADREFLKSLGDHPLARHLLYSVPPPPRPNYEGCTTIADRQAAQETCFPAALDWLLVNYAYYADAFMGKGGI
Ga0182034_116236361	3300016371	Soil	MNKHHTLEANHNTFDGDAISRADREFLASLGDHPLMRHPLYSVPPPPRPNYDGCITIAERQTAQEMCFPAALDWMLVNYAYCSGAFMGKGGIISLVDGELRSIASLRGF
Ga0182040_107903032	3300016387	Soil	MQNHSFLPEVGTDTFDGDAISRADRKFLASLSDHPLMREPLYSVPPPPRPNYDACATLDDRTVAQEACFPAALDWMLVNYAYYTDAFMGKGGIISLVDGKI
Ga0182037_103265012	3300016404	Soil	MNEHSTPAANHNTFDGEAISRADREFLKSLSDHPLARHPLYSVPPPLRPNYEGCTTIADRQAAQEACFPAALDWLLVNYAYYTGAFIGKGGIISLV
Ga0182037_107737362	3300016404	Soil	MTDVFDGEAISRADREFLDSLNNHPLMRHPLYSVPPPPRPDYAGCTTTAERTARQRACFPAALDWMLVNYAYYADAFMGKGGIISLV
Ga0182038_102203151	3300016445	Soil	MNEHRTPEANRDTFDGDAISRTDREFLANLGNHPLVRHPLYGVPPPPRPNYDGCTTVAERAEAQKACFPAALDWMLVNYAYYAGAFIGKGGIIS
Ga0182038_114332162	3300016445	Soil	MATNFDGAAVSKADRDFLESLNNHPLMQHPLYSAPPPARPDYTGCTTVADRTQRQKACFPAALDWMLVNYAYYPDAFMGKG
Ga0222622_113794291	3300022756	Groundwater Sediment	MNEHCTPEANRNTFDGDAISRADREFLASLSDHPLVRHPLYSVPPPPRPNYEGCITIDERAEAQRACFPAALDWMLVNYAYYTGAFIGKGGI
Ga0207688_109769371	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MNEHSAPRAGPDTFDGDASSRADREFLASLSDHPLVRHPLYSVPPPPRPNYDGCTTIYESTEAQQARFPAALDWMLVNYAYYA
Ga0318516_108545172	3300031543	Soil	MTDAFDGDAVSRADRGFLDSLNNHPLMPHPLYSVPPPPRPNYNGCTTVAERTVRQRACFPAALDWMLINYAYYADAFMGKGGIISLVDGKIGTI
Ga0318538_102857912	3300031546	Soil	MNEPRPAVTTAPFDGEAISRADREFLKSLGDHPLARHLLYSVPPPPRPNYEGCTTIADRQAAQETCFPAALDWLLVNYAYYADAFIGK
Ga0318528_107111451	3300031561	Soil	MSAFDGEAISKADREFLDSLNNHPLMRHPLYSVPAPPRPNYSGCTTIAEKTAKQIACFPAALDWMLINY
Ga0318542_101094672	3300031668	Soil	MSEPHPAVTTATFDGEAISRADREFLKSLGDHPLARHPLYSVPPPPRPNYEGCTTSADRQAAQKTCFPAALDWLLVNYAYYTGAFIAKGGVISLVDGEICTIASLRSFM
Ga0318561_104216542	3300031679	Soil	MSAFDGEAISKADREFLDSLNNHPLMRHPLYSVPAPPRPNYSGCTTIAEKTAKQIACFPAALDWM
Ga0318561_108162502	3300031679	Soil	MSEPHPAVTTATFDGEAISRADREFLKSLGDHPLARHPLYSVPPPPRPNYEGCTTSADRQAAQKTCFPAALDWLLVNYAYYTGAFIAKGGV
Ga0318574_107647911	3300031680	Soil	MTDTFDGDAVSRADREFLDSLDNHPLIQHPLYSVPPPPRPDYAGCTTAAERTARQRACFPAALDWMLINYAYYADAFLGKGGIISLVDGKIGTVAA
Ga0318572_102185672	3300031681	Soil	MNDQFDGDAISRADREFLASLDDHPLMRHPLYSVPPPPRPNYDGCTTIAEKQTAQEMCFPAALDWILVNYAYYSGAFMGKGGIISLVDGKMG
Ga0318560_104003201	3300031682	Soil	MNEPRPAVTTATFDGEAISRADREFLKSLGDHPLARHLLYSVPPPPRPNYEGCTTIADRQAAQETCFPAALDWLLVNYAYYADAFIGKGGIISLVDG
Ga0318560_108271741	3300031682	Soil	MNEQFDGDAISRADREFLASLDDHPLMRHPLYSVPPPPRPNYDGCTTIAEKQTAQEMCFPAALDWILVNYAYYSGAFMGKGGIISLVDGKMGTIASLKGFMQP
Ga0306917_105207012	3300031719	Soil	MNEHCAPEANRNTFDGDAISRADREFLASLGDHPLVRHPLYSVPPPPRPNYDGCTTIDERAEAQRACFPAALDWMLVNYAYYTGAF
Ga0306917_114091142	3300031719	Soil	MNKHHTPEANRNTFDGDAISRADREFLASLGDHPLMRHPLYSVPPPLLPDLAAFSTNDEWEAAKEACFNPAVDWMLVNYAYYSGAFMGKGGIISLVDGELR
Ga0318500_100069291	3300031724	Soil	MTNAFDGDAVSKADREFLVSLNDHPLMQHSLYSVPPPPRPDYTGCTTMADRTVRQSACFPAALNWMLINYAYYADAFMG
Ga0306918_103390341	3300031744	Soil	MNEHRTPEANRDTFDGDAISRTDREFLANLGNHPLVRHPLYGVPPPPRPNYDGCTTVAERAEAQKACFPAALDWMLVNYAYYAGAFIGKGGIISLVDGELYAIASLSS
Ga0306918_105555981	3300031744	Soil	MSAFDGEAISKADREFLDGLSNHPLMRHPLYSVPPPPRPNYSGCTTIAEKTAKQIACFPAALDWMLINYAYYADAF
Ga0306918_110499421	3300031744	Soil	MSTFDGAAVSRADREFLASLGDHPLARDPLYSVPPPPRPNYDGCTSIAEKAAAQAACFPAALDWMLVNYAYYTDAFMGKGGIISLVDGKIGTIASLQGFMQP
Ga0306918_110600002	3300031744	Soil	MTDAFDGDAVSLADREFLDSLNNHPLIRHPLYSVPPPLRPDYAGCTTAAERTARQRACFPAVLDWMLVNYAYYADAFMGKGGIISLVDGKIGTVIG
Ga0318537_103112131	3300031763	Soil	MTDAFDGDAISQADREFLDSLNNHPLMQHPLYSVPPPPRPNYNGCTTVAERTVRQRACFPTALDWMLINYAYYADAF
Ga0318554_106194872	3300031765	Soil	MSAFDGEAISKADREFLDSLNNHPLMRHPLYSVPAPPRPNYSGCTTIAEKTAKQIACFPAALDWMLIN
Ga0318521_110027612	3300031770	Soil	MTDTFDGDAVSRADREFLDSLDNHPLIQHPLYSVPPPPRPDYAGCTTAAERTARQRACFPAALDWMLINYAYYADAFMG
Ga0318546_103607081	3300031771	Soil	MTDVFDGEAISRADREFLDSLNNHPLMRHPLYSVPPPPRPDYAGCTTTAERTARQRACFPAALDWMLVNYAYYADAFMGKGGIISLVDGKIGTIVG
Ga0318498_105043521	3300031778	Soil	MNEQFDGDAISRADREFLASLDDHPLMRHPLYSVPPPPRPNYDGCTTIAEKQTAQEMCFPAALEWMLVNYAYYSGAFMGKGGIISLV
Ga0318547_101793913	3300031781	Soil	MSAFDGEAISKADREFLDGLSNHPLMRHPLYSVPPPPRPNYSGCTTIAEKTAKQIACFPAALDWMLVNYAY
Ga0318547_105153841	3300031781	Soil	MYKHRTSGASPDTFDGDVISRADREFLASLGDHPLMRHPLYSVPPPPRPNYNGCISVADRQAAQEACFPAALDWMLVNYAYYADAYIGKGGIISLVDGKIGTIGSLK
Ga0318552_102477332	3300031782	Soil	MSEPHPAVTTATFDGEAISRADREFLKSLGDHPLARHPLYSVPPPPRPNYEGCTTSADRQAAQKTCFPAALDWLLVNYAYYTGAFIAKGGVISLVDGEICTIASLRSFMQ
Ga0318552_105902401	3300031782	Soil	MNEHRTPEANRDTFDGDSISRTDREFLANLGNHPLVRHPLYGVPPPPRPNYDGCTTVAERAEAQKACFPAALDCM
Ga0318576_105822902	3300031796	Soil	MNEHSTPAANHNTFDGEAISRADREFLKSLSDHPLARHPLYSVPPPLRPNYEGCTTIADRQAAQEACFPAALDWL
Ga0318523_104477451	3300031798	Soil	MNKHHTPEANRNTFDGDAISRADREFLASLGDHPLMRHPLYSVPPPLLPDLAAFSTNDEWEAAKEACFNPAVDWMLVNYAYYSGAFMGKGGIISLVDGELRSIASLRNFMQ
Ga0318523_105504892	3300031798	Soil	MSAFDGEAISKADREFLDGLSNHPLMRHPLYSVPPPPRPNYSGCTTIAEKTAKQIACFPAALDWMLI
Ga0318565_103046812	3300031799	Soil	MTDVFDGEAISRADREFLDSLNNHPLMRHPLYSVPPPPRPDYAGCTTTAERTARQRACFPAALDWMLVNYAYYADAFMGKGGIIS
Ga0318567_104767932	3300031821	Soil	MNEHSTPAANHNTFDGEAISRADREFLKSLSDHPLARHPLYSVPPPLRPNYEGCTTIADRQAAQEACFPAALDWLLVNY
Ga0318567_105986551	3300031821	Soil	MNKHHTLEANHNTFDGDAISRADREFLASLGDHPLMRHPLYSVPPPPRPNYDGCITIAERQTAQEMCFPAALDWMLVNYAYYAGAFMG
Ga0318567_107168371	3300031821	Soil	MATNFDGAAISKADREFLESLNNHPLVQHPLYSAPPPARPDYTGCTTVADRTQRQKACFPAALDWMLVNYAYYPDAFMGKGGIISLIDGKI
Ga0310917_110797801	3300031833	Soil	MNKHHTPEANRNTFDGDAISRADREFLASLGDHPLMRHPLYSVPPPLLPDLAAFSTNDEWEAAKEACFNPAVDWMLVNYAYYSGAFMGKGGIISLVDGKM
Ga0318511_104120522	3300031845	Soil	MNEQFDGDAISRADREFLASLDDHPLMRHPLYSVPPPPRPNYDGCTTIAEKQTAQEMCFPAALDWILVNYAYYSGAFMGKGGIISLVDGKMGTIASLKGFMQPYV
Ga0318512_105330232	3300031846	Soil	MNEPRPAVTTAPFDGEAISRADREFLKSLGDHPLARHLLYSVPPPPRPNYEGCTTSADRQAAQKTCFPAALDWLLVNYAYYTG
Ga0306919_100305181	3300031879	Soil	MNKHHTPEANRNTFDGDAISRADREFLASLGDHPLMRHPLYSVPPPLLPDLAAFSTNDEWEAAKEACFNPAVDWMLVNYAYYSGAFMGKGGI
Ga0306919_103139041	3300031879	Soil	MNEQFDGDAVSRADREFLASLGDHPLVRHPLYSVPPPPRPDYDGCITIAERQTAQEMCFPAALDWMLVNYAY
Ga0306919_103689211	3300031879	Soil	MNKNNTAEANCDTFDGDAISRADREFLASLSDHPLAQHPLYSVPPPPRPDYAGCMTIADRQAAQQACFIPALDWVLVNYAYHAGAFIGKGGI
Ga0306919_107041491	3300031879	Soil	MNEHGTPGANRNTFDGDAISRTDREFLANLGNHPLVRHPLYGVPPPPRPNYDGCTTVAERAEAQKACFPAALDWMLVNYAYYAGA
Ga0306919_107464841	3300031879	Soil	MSAFDGEAISKADREFLDGLSNHPLMRHPLYSVPPPPRPNYSGCTTIAEKTAKQIACFPAALDWMLINY
Ga0306925_100096251	3300031890	Soil	MNKHRTLEASPNTFDGDADREFLASLSDHPLMRHPLYSVPPPPRPNYNGCVSVADRQAAQEACFPAALDWMLVNYAYYADAYIGKGG
Ga0306925_100590441	3300031890	Soil	MSAFDGEAISKADREFLDSLNNHPLMRHPLYSVPAPPRPNYSGCTTIAEKTAKQIACFPAALDWMLINYAYYADA
Ga0306925_105534821	3300031890	Soil	MNKNNTAEANCDTFDGDAISRADREFLASLSDHPLAQHPLFSVPPPPRPDYAGCMTIADRQAAQQACFIPALDWVLVNYAYH
Ga0306925_112861112	3300031890	Soil	MNEHRTPEANRDTFDGDAISRTDREFLANLGNHPLVRHPLYGVPPPPRPNYDGCTTVAERAEAQKACFPAALDWMLVNYAYYAGAFIGKGG
Ga0306925_121165881	3300031890	Soil	MTDAFDGDAVSRADRGFLDSLNNHPLMQHPLYSVPPPPRPNYSGCATVAERTVRQKACFPAALDWMLINYAYYADAFMGK
Ga0306921_1000526616	3300031912	Soil	MTDAFDGDAISQADREFLDSLNNHPLMQHPLYSVPPPPRPNYNGCTTVAERTVRQRACFPTALDWMLINYAYYADGKGGIISLVDGKIGTIAGLRGF
Ga0306921_103568053	3300031912	Soil	MNEHSTPAANHNTFDGEAISRADREFLKSLSDHPLARHPLYSVPPPLRPNYEGCTTIADRQAAQEACFPAALDWLLVNYAYYTGAFIGKGGIISLVDGEICTI
Ga0306921_115669492	3300031912	Soil	MSEPHPAVTTATFDGEAISRADREFLKSLGDHPLARHPLYSVPPPPRPNYEGCTTSADRQAAQKTCFPAALDWLLVNYAYYTGAFIAKGGVISLVDGEICTIA
Ga0310912_112487812	3300031941	Soil	MTDVFDGEAISRADREFLDSLNNHPLMRHPLYSVPPPPRPDYAGCTTTAERTARQRACFPAALDWMLVNYAYYADA
Ga0310913_104329471	3300031945	Soil	MNEHRTPEANRDTFDGDAISRTDRGFLANLGNHPLVRHPLYGVPPPPRPNYDGCTTVAERAEAQKACFPAALDWMLVNYAYYAGAFIGKGGIISLVDGEICAIASLRSF
Ga0310909_100503144	3300031947	Soil	MNKHHTPEANRNTFDGDAISRADREFLASLGDHPLMRHPLYSVPPPLLPDLAAFSTNDEWEAAKEACFNPAVDWMLVNYAYYSGAFMGK
Ga0310909_102840583	3300031947	Soil	MSAFDGEAISKADREFLDSLNNHPLMRHPLYSVPAPPRPNYSGCTTIAEKTAKQIACFPAAL
Ga0310909_103202021	3300031947	Soil	MNEHRTPEANRDTFDGDSISRTDREFLANLGNHPLVRHPLYGVPPPPRPNYDGCTTVAERAEAQKACFPAALDWMLVNYAYYAGAFIGKGGIISLVDGEICA
Ga0310909_111464162	3300031947	Soil	MNEPRPAVTTAPFDGEAISRADREFLKSLGDHPLARHLLYSVPPPPRPNYEGCTTIADRQAAQETCFPAALDWLLVNYAYYA
Ga0306926_100136541	3300031954	Soil	MSAFDGEAISKADREFLDGLSNHPLMRHPLYSVPPPPRPNYSGCTTIAEKTAKQIACFPAALDWMLIN
Ga0306926_103109491	3300031954	Soil	MNEQNRNTFDGDAISQADREFLVSLDDHPLMRHPRYSVPPPPRPNYDGCITIAEKQTAQEMCFPAALEWMLVNYAYYSGAFMGKGGIISLVDGKMGTIASLR
Ga0306926_124447562	3300031954	Soil	MTDAFDGDAVSRADRGFLDSLNNHPLMQHPLYSVPPPPRPNYSGCAAVAERTVRQKACFPAALDWMLINYAYYADAFMGKGGIISLVDGKIGTIAGLR
Ga0318531_105690812	3300031981	Soil	MNEHSTPAANHNTFDGEAISRADREFLKSLSDHPLARHPLYSVPPPLRPNYEGCTTIADRQAAQEACFPAALDW
Ga0306922_110952612	3300032001	Soil	MNKHDALKISADAFDGDAISRADREFLASLADHPLARHPLYSVQPPPRPDYDGCTSIVEKQTAQEMCFPAALDWLLVNYDYYNGAFMGKGGIISLF
Ga0318563_107050321	3300032009	Soil	MSEHNSTNPFDGDAISRADREFLASLGDHPLARHPLYSVPPPPRPDYAGCTTVDERAVAQRACFPGALDGMLVNYAYYTDAFMGKGGIISLVD
Ga0318569_104486172	3300032010	Soil	MTDTFDGDAVSRADREFLDSLDNHPLIQHPLYSVPPPPRPDYAGCTTAAERTARQRACFPAALDWMLINYAYYADAFLGK
Ga0318507_101653721	3300032025	Soil	MNKHRTPEASPDTFDGDAISRADREFLASLGDHLLMRHPLYSVPPPPRPNYNGCISVADRQAAQEACFPAALDWMLVNYAYYADAFMGKGGIISLVDGKIGTIGSLK
Ga0318507_104999082	3300032025	Soil	MNEHGAPGANRNTFDGDAISRADREFLASLGDHPLVRHPLYSVPPPPRPNYEGCTTIVERQTAQQMCFPAALDWMLVNYAYYTGAF
Ga0310911_105136872	3300032035	Soil	MSAFDGEAISKADREFLDSLNNHPLMRHPLYSVPAPPRPNYSGCTTIAEKTAKQIACFPAALDWML
Ga0318533_101998051	3300032059	Soil	MSAFDGEAISKADREFLDSLNNHPLMRHPLYSVPAPPRPNYSGCTTIAEKTAKQIACFPAALDWMLINYAYYADAF
Ga0318533_104185851	3300032059	Soil	MNEQNRNTFDGDAISQADREFLVSLDDHPLMRHPRYSVPPPPRPNYDGCITIAEKQTAQEMCFPAALEWMLVNYAYYSGAFMGKGGI
Ga0318533_112392261	3300032059	Soil	MNEHRTFEANRNTFDGDAISRADREFLASLSDHPLARHPLYSVPPPPRPNYEGCTTIADRQAAQEACFPAALDWMLVNYAYYADAFMGKGGIISLVDGKIGTMGSWK
Ga0318504_101939501	3300032063	Soil	MNEHCAPEANRNTFDGDAISRADREFLASLGDHPLVRHPLYSVPSPPRPNYDGCTTIDERAEAQRACFPAALDWMLVNYAYYTGAF
Ga0318513_106067161	3300032065	Soil	MNEQFDGDAISRADREFLASLDDHPLMRHPLYSVPPPPRPNYDGCTTIAEKQTAQEMCFPAALDWMLVNYAYYAGAFVGKGGII
Ga0318514_103515672	3300032066	Soil	MNEQNRNTFDGDAISQADREFLVSLDDHPLMRHPRYSVPPPPRPNYDGCTTIAEKQTAQEMCFPAALDWILVNYAYYSG
Ga0306924_105498323	3300032076	Soil	MSAFDGEAISKADREFLDGLSNHPLMRHPLYSVPPPPRPNYSGCTTIAEKTAKQIACFPAALDWMLINYAYYAD
Ga0318525_104566472	3300032089	Soil	MSAFDGEAISKADREFLDGLSNHPLMRHPLYSVPPPPRPNYSGCTTIAEKTAKQIACFPAALD
Ga0306920_1008376383	3300032261	Soil	MNEPFDGDAISRADREFLVSLDDHPLMRHPRYSVPPPPRPNYDGCITIAEKQTAQEMCFPAALEWMLVNYAYYSGAFMGKGGIISLVDGKMGTIA
Ga0306920_1037874932	3300032261	Soil	MYKHRTSGASPDTFDGDVISRADREFLASLGDHPLMRHPLYSVPPPPRPNYNGCISVADRQAAQEACFPAALDWMLVNYAYYADAYIGKGGIISLVDGKI
Ga0318519_102962122	3300033290	Soil	MNKHRTLEASPNTFDGDADREFLASLSDHPLMRHPLYSVPPPPRPNYNGCVSVADRQAAQEACFPAALDWMLVNYAYYADAYIGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085296

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences