Metagenome / Metatranscriptome Family F085273

Basic Information
Family ID	F085273
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	57 residues
Representative Sequence	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREEAQFLQKRAS
Number of Associated Samples	81
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.88 %
% of genes near scaffold ends (potentially truncated)	21.62 %
% of genes from short scaffolds (< 2000 bps)	84.68 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Most Common Taxonomy
Group	Bacteria (52.252 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (18.919 % of family members)
Environment Ontology (ENVO)	Unclassified (39.640 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.847 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.77% β-sheet: 16.28% Coil/Unstructured: 63.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05378	Hydant_A_N	28.83
PF09084	NMT1	10.81
PF00578	AhpC-TSA	8.11
PF04072	LCM	1.80
PF03401	TctC	0.90
PF00043	GST_C	0.90
PF13594	Obsolete Pfam Family	0.90
PF13379	NMT1_2	0.90
PF01717	Meth_synt_2	0.90
PF01740	STAS	0.90
PF02538	Hydantoinase_B	0.90
PF00353	HemolysinCabind	0.90
PF02518	HATPase_c	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	57.66
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	10.81
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	10.81
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.80
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.80
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.90
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.90
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.25 %
Unclassified	root	N/A	47.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.25 %
Unclassified	root	N/A	47.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.25 %
Unclassified	root	N/A	47.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.52 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.51 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.11 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	2.70 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.70 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	2.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.80 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	2.70 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.90 %
Rhodovastum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	2.70 %
Rhodoplanes elegans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes elegans	0.90 %
Rhodovastum atsumiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10518740	Not Available	1381	Open in IMG/M
3300002568\|C688J35102_119144720	Not Available	645	Open in IMG/M
3300004808\|Ga0062381_10146321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	783	Open in IMG/M
3300005332\|Ga0066388_100008328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7750	Open in IMG/M
3300005332\|Ga0066388_100687326	Not Available	1632	Open in IMG/M
3300005332\|Ga0066388_101211386	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300005332\|Ga0066388_101599908	All Organisms → cellular organisms → Bacteria → Proteobacteria	1146	Open in IMG/M
3300005332\|Ga0066388_103393635	Not Available	814	Open in IMG/M
3300005332\|Ga0066388_103623520	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005332\|Ga0066388_104034523	Not Available	749	Open in IMG/M
3300005332\|Ga0066388_104392931	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300005332\|Ga0066388_107386832	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300005332\|Ga0066388_107659297	Not Available	541	Open in IMG/M
3300005459\|Ga0068867_100991077	Not Available	761	Open in IMG/M
3300005558\|Ga0066698_10593266	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005558\|Ga0066698_10781294	Not Available	621	Open in IMG/M
3300005618\|Ga0068864_101006078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	827	Open in IMG/M
3300005713\|Ga0066905_100010764	All Organisms → cellular organisms → Bacteria	4333	Open in IMG/M
3300005713\|Ga0066905_100139336	All Organisms → cellular organisms → Bacteria → Proteobacteria	1727	Open in IMG/M
3300005713\|Ga0066905_101714383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300005713\|Ga0066905_102098204	Not Available	526	Open in IMG/M
3300005764\|Ga0066903_100272435	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300005764\|Ga0066903_103507875	Not Available	845	Open in IMG/M
3300005833\|Ga0074472_10041088	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300005833\|Ga0074472_10577077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6707	Open in IMG/M
3300005833\|Ga0074472_11420227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1590	Open in IMG/M
3300005875\|Ga0075293_1063639	Not Available	545	Open in IMG/M
3300005937\|Ga0081455_10006438	All Organisms → cellular organisms → Bacteria	12584	Open in IMG/M
3300006034\|Ga0066656_10102819	All Organisms → cellular organisms → Bacteria → Proteobacteria	1738	Open in IMG/M
3300006046\|Ga0066652_100455657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1178	Open in IMG/M
3300006854\|Ga0075425_100717490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1148	Open in IMG/M
3300007076\|Ga0075435_101339999	Not Available	627	Open in IMG/M
3300007788\|Ga0099795_10013080	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300009012\|Ga0066710_100387730	Not Available	2078	Open in IMG/M
3300009090\|Ga0099827_10863499	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300009176\|Ga0105242_10356890	Not Available	1352	Open in IMG/M
3300009792\|Ga0126374_10286087	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300009792\|Ga0126374_11333223	Not Available	581	Open in IMG/M
3300009814\|Ga0105082_1046188	Not Available	727	Open in IMG/M
3300010046\|Ga0126384_10017181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4616	Open in IMG/M
3300010047\|Ga0126382_10688688	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300010047\|Ga0126382_11185027	Not Available	683	Open in IMG/M
3300010047\|Ga0126382_12515009	Not Available	502	Open in IMG/M
3300010358\|Ga0126370_11359425	Not Available	668	Open in IMG/M
3300010359\|Ga0126376_11022600	Not Available	828	Open in IMG/M
3300010359\|Ga0126376_12714975	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300010359\|Ga0126376_13086749	Not Available	515	Open in IMG/M
3300010360\|Ga0126372_11301260	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	756	Open in IMG/M
3300010361\|Ga0126378_11477034	Not Available	770	Open in IMG/M
3300010362\|Ga0126377_10084163	Not Available	2863	Open in IMG/M
3300010362\|Ga0126377_10569109	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300010362\|Ga0126377_13604253	Not Available	501	Open in IMG/M
3300012200\|Ga0137382_10289426	Not Available	1141	Open in IMG/M
3300012204\|Ga0137374_10154433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2043	Open in IMG/M
3300012207\|Ga0137381_10544140	Not Available	1012	Open in IMG/M
3300012207\|Ga0137381_10992567	Not Available	724	Open in IMG/M
3300012208\|Ga0137376_10843848	Not Available	788	Open in IMG/M
3300012212\|Ga0150985_108614393	Not Available	862	Open in IMG/M
3300012349\|Ga0137387_10174499	Not Available	1538	Open in IMG/M
3300012353\|Ga0137367_11009952	Not Available	567	Open in IMG/M
3300012360\|Ga0137375_10050245	All Organisms → cellular organisms → Bacteria → Proteobacteria	4559	Open in IMG/M
3300012361\|Ga0137360_11097753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	687	Open in IMG/M
3300012362\|Ga0137361_11866642	Not Available	518	Open in IMG/M
3300012469\|Ga0150984_109363607	All Organisms → cellular organisms → Bacteria → Proteobacteria	991	Open in IMG/M
3300012685\|Ga0137397_10018086	All Organisms → cellular organisms → Bacteria	4930	Open in IMG/M
3300012930\|Ga0137407_10377484	Not Available	1309	Open in IMG/M
3300012944\|Ga0137410_10048810	All Organisms → cellular organisms → Bacteria	3010	Open in IMG/M
3300012948\|Ga0126375_10155236	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300012948\|Ga0126375_10432458	Not Available	961	Open in IMG/M
3300012948\|Ga0126375_10520922	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300012948\|Ga0126375_11166001	Not Available	639	Open in IMG/M
3300012971\|Ga0126369_11041148	Not Available	907	Open in IMG/M
3300015241\|Ga0137418_10138611	All Organisms → cellular organisms → Bacteria	2153	Open in IMG/M
3300015245\|Ga0137409_10233609	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	1640	Open in IMG/M
3300015371\|Ga0132258_11300066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1838	Open in IMG/M
3300016387\|Ga0182040_10022338	All Organisms → cellular organisms → Bacteria	3542	Open in IMG/M
3300017944\|Ga0187786_10169638	Not Available	805	Open in IMG/M
3300018028\|Ga0184608_10038346	Not Available	1838	Open in IMG/M
3300018052\|Ga0184638_1304420	Not Available	538	Open in IMG/M
3300018072\|Ga0184635_10216324	Not Available	762	Open in IMG/M
3300018075\|Ga0184632_10125255	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300018081\|Ga0184625_10460693	Not Available	650	Open in IMG/M
3300018081\|Ga0184625_10554484	Not Available	571	Open in IMG/M
3300018468\|Ga0066662_10682221	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300018482\|Ga0066669_10437345	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300019880\|Ga0193712_1123610	Not Available	546	Open in IMG/M
3300019886\|Ga0193727_1039101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1582	Open in IMG/M
3300020170\|Ga0179594_10067959	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300020170\|Ga0179594_10095280	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300020170\|Ga0179594_10310295	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	598	Open in IMG/M
3300021073\|Ga0210378_10113130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodovastum → Rhodovastum atsumiense	1055	Open in IMG/M
3300021560\|Ga0126371_10770847	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300025935\|Ga0207709_11366839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	586	Open in IMG/M
3300027654\|Ga0209799_1046773	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300027669\|Ga0208981_1135033	Not Available	629	Open in IMG/M
3300027735\|Ga0209261_10001129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7245	Open in IMG/M
3300027882\|Ga0209590_10693775	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300027910\|Ga0209583_10271846	Not Available	757	Open in IMG/M
3300027961\|Ga0209853_1041048	Not Available	1317	Open in IMG/M
3300028768\|Ga0307280_10137756	Not Available	836	Open in IMG/M
3300031114\|Ga0308187_10367485	Not Available	559	Open in IMG/M
3300031184\|Ga0307499_10069171	Not Available	908	Open in IMG/M
3300031198\|Ga0307500_10236803	Not Available	558	Open in IMG/M
3300031720\|Ga0307469_10661829	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300031740\|Ga0307468_100162858	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300031910\|Ga0306923_12380835	Not Available	526	Open in IMG/M
3300031945\|Ga0310913_10965907	Not Available	598	Open in IMG/M
3300032174\|Ga0307470_10072392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1866	Open in IMG/M
3300032180\|Ga0307471_101429656	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300032205\|Ga0307472_100699770	Not Available	911	Open in IMG/M
3300034090\|Ga0326723_0358143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes elegans	659	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.99%
Host-Associated	Host-Associated	9.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.28%
Aquatic	Environmental → Aquatic	11.71%
Plants	Host-Associated → Plants	9.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.38%
Sediment	Environmental → Aquatic → Sediment	9.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.50%
Freshwater	Environmental → Aquatic → Freshwater	2.70%
Peat	Environmental → Terrestrial → Peat	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.76%
Loam	Environmental → Terrestrial → Soil → Loam	18.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.80%
Sand	Environmental → Terrestrial → Soil → Sand	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.70%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_105187402	3300000550	Soil	MKGPSLVTMNKRCAYCNEPFRVTDQGIEAMSADNKLVCSEFCAQALREEAQLLQRRAS*
C688J35102_1191447201	3300002568	Soil	MKVPPFVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQKRAS*
Ga0062381_101463212	3300004808	Wetland Sediment	MKAPSLVTMNKRCAYCNEPFRITEQGIEALPAGDQLVCSEFCAQALREESQFLQKRAS*
Ga0066388_1000083285	3300005332	Tropical Forest Soil	MKGPSLVTMNKRCAYCNEPFRVTEQGIEALSADNKLVCSEFCAQALREEAQLLQRRAS*
Ga0066388_1006873263	3300005332	Tropical Forest Soil	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQKRAS*
Ga0066388_1012113862	3300005332	Tropical Forest Soil	MKSLVSVAKRCAYCNEPFRITEQGVEALTAGDKLVCNEFCAQALREEAHLLKRAS*
Ga0066388_1015999081	3300005332	Tropical Forest Soil	MKVPSLVSMNKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQKRAS*
Ga0066388_1033936353	3300005332	Tropical Forest Soil	MKVPSLVSMNKRCAYCSEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQKRAS*
Ga0066388_1036235202	3300005332	Tropical Forest Soil	MKGPSLVTMNKRCAYCNEPFRVTDQGIEALSADNKLVCSEFCAQALREEAQLVQRRAS*
Ga0066388_1040345231	3300005332	Tropical Forest Soil	MKGPSLVTMNKRCAYCNEPFRVTDQGIEALTADNKLVCSEFCAQALREEAQLLQRRAS*
Ga0066388_1043929311	3300005332	Tropical Forest Soil	KSLVSVAKRCAYCNEPFRITEQGVEAHMAGDQLVCNEFCAQALREEAHLIKRAS*
Ga0066388_1073868322	3300005332	Tropical Forest Soil	MKVPSVVSVAKRCAYCNEPFRITEDGVEAYEAGDRLFCNEFCAQALREESN
Ga0066388_1076592971	3300005332	Tropical Forest Soil	MQVPFVSVAKRCAYCKEPFRITEQGVEAHQAGEQLVCSEFCAQAIREEASEMKRAS*
Ga0068867_1009910771	3300005459	Miscanthus Rhizosphere	RCAYCSEPFRITEQGIEALPADNHLVCSEFCAQALREESQFLQKRAS*
Ga0066698_105932661	3300005558	Soil	MKGPSLVTMNKRCAYCNEPFRITEQGIEALSADNQLVCTEFCAQALREEAQLLQRRAS*
Ga0066698_107812942	3300005558	Soil	VMKGPSLVTMNKRCAYCNEPFRVTDQGIEALSADNKLVCTEFCAQALREEAQLLQRRAS*
Ga0068864_1010060782	3300005618	Switchgrass Rhizosphere	MTVPSLISMSKRCAYCSEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQKRAS*
Ga0066905_1000107644	3300005713	Tropical Forest Soil	MKGPSLVTMNKRCAYCNEPFRVTDQGIEALSADNKLVCSEFCAQALREEAQLLQRRAS*
Ga0066905_1001393362	3300005713	Tropical Forest Soil	MNSLVSVAKRCAYCNEPFRITEQGVEAHMAGDQLVCNEFCAQALREEVHLIKRAS*
Ga0066905_1017143832	3300005713	Tropical Forest Soil	VAKRCAYCNEPFRITEQGVEAHMAGDQLVCNEFCAQALREEAHLIKRAS*
Ga0066905_1020982042	3300005713	Tropical Forest Soil	MKVPSLVSMNKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREESQFVQKRAS*
Ga0066903_1002724353	3300005764	Tropical Forest Soil	MKRPSLVTMNKRCAYCNEPFRVTDQGIEALTADNKLVCSEFCAQALREEAQLLQRRAS*
Ga0066903_1035078751	3300005764	Tropical Forest Soil	MQAPLAVSVAKRCAYCNEPFRITEQGVEACRIGDHYVCNEYCAQAISEEASMRRPGP*
Ga0074472_100410881	3300005833	Sediment (Intertidal)	MKPSLVTMGKRCAYCSEPFRITEEGIEALPAGNQLVCSEFCGQALREESQWLQKRAS*
Ga0074472_105770773	3300005833	Sediment (Intertidal)	MKAPSLVTMNKRCAYCNEPFRITEQGIEALTAGDQLVCSEFCAQALREESQFLQKRAS*
Ga0074472_114202272	3300005833	Sediment (Intertidal)	MKPSLVTTGKRCAYCNEPFRITEQGIEALAAGDQLVCSEFCAQALREEAHLLQRRAS*
Ga0075293_10636392	3300005875	Rice Paddy Soil	MPMPSLITTGKRCAYCNEPFRITEQGIEALSAGDKLVCSEFCAQALREESQWVQRRA
Ga0081455_100064387	3300005937	Tabebuia Heterophylla Rhizosphere	MKGPSLVTMNKRCAYCNEPFRVTDQGIEALSTDNKLVCSEFCAQALREEAQLLQRRAS*
Ga0066656_101028192	3300006034	Soil	MKGPSLVTMNKRCAYCNEPFRVTDQGIEALSADNKLVCTEFCAQALREEAQLLQRRAS*
Ga0066652_1004556573	3300006046	Soil	MKSLVSVAKRCAYCNEPFRITEQGVEALSADDKLVCNEFCAQALREEAHLLQRAS*
Ga0075425_1007174902	3300006854	Populus Rhizosphere	MNGPNFVPLAKRCAYCSEPFRMTEQRLEAHRAGDQFVCNEFCAQALCEEAHLQQRAS*
Ga0075435_1013399991	3300007076	Populus Rhizosphere	FIRRRRDMTVPSLISMSKRCAYCSEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQKRAS*
Ga0099795_100130804	3300007788	Vadose Zone Soil	MKVPSLVSMNKRCAYCNEPFRITEQGIEALPADNKLVCSEFCAQALREETQFVQKRAS*
Ga0066710_1003877303	3300009012	Grasslands Soil	MKGPFLVTMNKRCAYCNEPFRITEQGIEALSADNQLVCTEFCAQALREEAQLLQRRAS
Ga0099827_108634992	3300009090	Vadose Zone Soil	MKVPSLVSMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQSLREETQFVQKRAS*
Ga0105242_103568902	3300009176	Miscanthus Rhizosphere	MTVPSLISMSKRCAYCSEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQQRAS*
Ga0126374_102860872	3300009792	Tropical Forest Soil	SVAKRCAYCNEPFRITEQGVEAHMAGDQLVCNEFCAQALREEAHLIKRAS*
Ga0126374_113332231	3300009792	Tropical Forest Soil	MKVPSLVSMNKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREENQFAQKRAS*
Ga0105082_10461881	3300009814	Groundwater Sand	MQVPIVSVAKRCAYCNEPFRITEQGVEAHPAGEQLVCSEFCAQAIREEANQLKCAS*
Ga0126384_100171814	3300010046	Tropical Forest Soil	MKSLVSVAKRCAYCNEPFRITEQGVEAHMAGDQLVCNEFCAQALREEAHLIKRAS*
Ga0126382_106886881	3300010047	Tropical Forest Soil	MKVPSVVSVAKRCAYCNEPFRITEEGVEAYEAGDRLFCNEFCAQALREESNLTRAS*
Ga0126382_111850271	3300010047	Tropical Forest Soil	YCSLVAGAIMKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQKRAS*
Ga0126382_125150091	3300010047	Tropical Forest Soil	MTVPSLISMSKRCAYCSEPFRITEQGIEALPADNQLVCSEFCAQALREESQFAQKRAS*
Ga0126370_113594251	3300010358	Tropical Forest Soil	MKVPSLVSMNKRCAYCNEPFRITEQGIEALPADNQFVCSEFCAQALREENQFVQKRAS*
Ga0126376_110226002	3300010359	Tropical Forest Soil	MKSLVSVAKRCAYCNEPFRITEQGVEALSADDKLVCNEICAQALREEA
Ga0126376_127149751	3300010359	Tropical Forest Soil	LVTMNKRCAYCNEPFRVTDQGIEALSADNKLVCSEFCAQALREEAQLLQRRAS*
Ga0126376_130867491	3300010359	Tropical Forest Soil	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREESQFVQKRAS*
Ga0126372_113012602	3300010360	Tropical Forest Soil	MKVPSLVSTNKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQKRAS*
Ga0126378_114770342	3300010361	Tropical Forest Soil	MKGPSLVTMNKRCAYCNEPFRVTDQGIDALTADNKLVCSEFCAQALREEAQLLQRRAS*
Ga0126377_100841631	3300010362	Tropical Forest Soil	MKVPSKVPSLISMSKRCAYCSEPFRITEQGIEALPADNQLVCSEFCAQALREETQFLQKRAS*
Ga0126377_105691092	3300010362	Tropical Forest Soil	MKVPSGVSVAKRCAYCNEPFRITEDGVEAYEAGDRLFCNEFCAQALREESNLTRAS*
Ga0126377_136042532	3300010362	Tropical Forest Soil	PGAVMKGPSLVTMNKRCAYCNEPFRVTEQGIEALSADNKLVCSEFCAQALREEAQLLQRRAS*
Ga0137382_102894261	3300012200	Vadose Zone Soil	MKVPSLVSMNKRSAYCNEPFRITEHGIEALPADNQLVCSEFCAQSLREETQFVQKRAS*
Ga0137374_101544332	3300012204	Vadose Zone Soil	MKSLVSVAKRCAYCNEPFRITEQGVEAHTAGDKLVCNEFCAQALREKAHLLERAS*
Ga0137381_105441402	3300012207	Vadose Zone Soil	MKVPSLVSMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQALREETQFVQKRAS*
Ga0137381_109925672	3300012207	Vadose Zone Soil	SMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQSLREETQFVQKRAS*
Ga0137376_108438481	3300012208	Vadose Zone Soil	AIMKVPSLVSMNKRCAYCNEPFRITEQGIEALPADNKLVCSEFCAQALREETQFVQKRAS
Ga0150985_1086143932	3300012212	Avena Fatua Rhizosphere	MLVAGANMKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREETQFLQKRAS*
Ga0137387_101744992	3300012349	Vadose Zone Soil	MKAPSLVSMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQSLREETQFVQKRAS*
Ga0137367_110099521	3300012353	Vadose Zone Soil	MKSLVSMAKRCAYCNEPFRITEQGVEAHTAGDKLVCNEFCAQALREKAHLLERAS*
Ga0137375_100502453	3300012360	Vadose Zone Soil	MKVPSLVSMNKRCAYCNEPFRITEHGIEALPADNKLVCSEFCAQALREETQFVQKRAS*
Ga0137360_110977532	3300012361	Vadose Zone Soil	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNKLVCSEFCAQALREEPQFVQKRAS*
Ga0137361_118666422	3300012362	Vadose Zone Soil	VSMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQSLREETQFVQKRAS*
Ga0150984_1093636071	3300012469	Avena Fatua Rhizosphere	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREETQFLQKRAS*
Ga0137397_100180866	3300012685	Vadose Zone Soil	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNKLVCSEFCAQALREEAQFLQKRAS*
Ga0137407_103774842	3300012930	Vadose Zone Soil	MKGPSLVTMSKRCAYCNEPFRITEQGIEALSADNKLVCSEFCAQALREEAQLLQRRAS*
Ga0137410_100488103	3300012944	Vadose Zone Soil	MKMPSLVSMNKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQSLREETQFVQKRAS*
Ga0126375_101552361	3300012948	Tropical Forest Soil	MKGPSLVTMNKRCAYCNEPFRVTEQGIEALSADNKLVCSEFCAQALREEALLLQ
Ga0126375_104324581	3300012948	Tropical Forest Soil	MKVPSLVSMSKRCAYCNEPFRITEQGIEALSADNQLVCSEFCAQALREESQ
Ga0126375_105209221	3300012948	Tropical Forest Soil	MKGPSLVTMNKRCAYCNEPFRVTDQGIEALSADNKLVCSEFCAKALREEAQ
Ga0126375_111660011	3300012948	Tropical Forest Soil	TMNKRCAYCNEPFRVTEQGIEALSADNKLVCSEFCAQALREEAQLLQRRAS*
Ga0126369_110411481	3300012971	Tropical Forest Soil	MKGSSLVTMNKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREEAQLLQRRAS*
Ga0137418_101386112	3300015241	Vadose Zone Soil	MKVPSLVSMNKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQSLREETQFVQKRAS*
Ga0137409_102336092	3300015245	Vadose Zone Soil	MKMPSLVSMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQSLREETQFVQKRAS*
Ga0132258_113000662	3300015371	Arabidopsis Rhizosphere	MQVPTVVSVAKRCAYCDEPFRITEQGVEAYQVEDKLVCNEFCAQAISEEAQWRRRAS*
Ga0182040_100223387	3300016387	Soil	MQATLAVSVAKGCAYCNEPFRITEQGVEACRIGDHYVCNEYCAQAIREEASMRRPGP
Ga0187786_101696382	3300017944	Tropical Peatland	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREETQFLQKRAS
Ga0184608_100383461	3300018028	Groundwater Sediment	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNKLVCSEFCAQALREEAQFLQKRAS
Ga0184638_13044201	3300018052	Groundwater Sediment	MKVPSLVTTGKRCAYCNEPFRITDEGIEAHTAGDKLVCGEFCAQALREESQLLQKRAS
Ga0184635_102163242	3300018072	Groundwater Sediment	MKVPSLVTTGKRCAYCNEPFRITDEGIEALTAGDKLVCGEFCAQALREETQLLQKRAS
Ga0184632_101252552	3300018075	Groundwater Sediment	MKVPSLVTTGKRCAYCNEPFRITEQGIEALTAGDKLVCSEFCAQALREETQLQQKRAS
Ga0184625_104606932	3300018081	Groundwater Sediment	MKSLVSLAKRCAYCNEPFRITEQGVEALSADDKLVCNEFCAQALREEAHLLKRAS
Ga0184625_105544841	3300018081	Groundwater Sediment	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNKLVCSEFCAQALREEAQFVQKRAS
Ga0066662_106822211	3300018468	Grasslands Soil	MKGPSLVTMNKRCAYCNEPFRITEQGIEALSADNQLVCTEFCAQALREEAQLLQRRAS
Ga0066669_104373452	3300018482	Grasslands Soil	MKAPSLVSMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQSLREESQFVQKRAW
Ga0193712_11236101	3300019880	Soil	MKVPSLVSMSKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQALREEAQFVQKRAS
Ga0193727_10391012	3300019886	Soil	MKVPSLVSMSKRCAYCDEPFRITEQGIEALPADNKLVCSEFCAQALREEAQFLQKRAS
Ga0179594_100679592	3300020170	Vadose Zone Soil	MKVPSLVSMNKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQSLREETQFVQKRAS
Ga0179594_100952802	3300020170	Vadose Zone Soil	MKVPSLVSMNKRCAYCNEPFRITEQGIEALPADNKLVCSEFCAQALREETQFVQKRAS
Ga0179594_103102951	3300020170	Vadose Zone Soil	MKVPSLVSMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQALREETQFVQKR
Ga0210378_101131302	3300021073	Groundwater Sediment	MKVPSLVTTGKRCAYCNEPFRITEQGIEALTAGDKLVCSEFCAQALREETQLLQKRAS
Ga0126371_107708472	3300021560	Tropical Forest Soil	MKGPSLVTMNKRCAYCNEPFRVTDQGIEALTADNKLVCSEFCAQALREEAQLLQRRAS
Ga0207709_113668391	3300025935	Miscanthus Rhizosphere	HATLNRQVRWSHKFTRRRRDMTVPSLISMSKRCAYCSEPFRITEQGIEALPADNQLVCSEFCAQALREESQFLQKRAS
Ga0209799_10467732	3300027654	Tropical Forest Soil	MKSLVSVAKRCAYCNEPFRITEQGVEAHMAGDQLVCNEFCAQALREEVHLIKRAS
Ga0208981_11350331	3300027669	Forest Soil	MKVPSLVSMSKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQSLREETQFVQKRAS
Ga0209261_100011295	3300027735	Wetland Sediment	MKAPSLVTMNKRCAYCNEPFRITEQGIEALTAGDQLVCSEFCAQALREESQFLQKRAS
Ga0209590_106937752	3300027882	Vadose Zone Soil	MKVPSLVSMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQSLREETQFVQKRAS
Ga0209583_102718461	3300027910	Watersheds	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNKLVCSEFCAQALREETQFLQKRAS
Ga0209853_10410481	3300027961	Groundwater Sand	AKRCAYCKEPFRITEEGVEAHPAGEQLVCSEFCAQAIREEADEMKRAS
Ga0307280_101377561	3300028768	Soil	MKVPSLVSMSKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQALREETQFLQKRAS
Ga0308187_103674851	3300031114	Soil	MSKRCAYCNEPFRITEQGIEAFPADNKLVCSEFCAQALREEAQFLQKRAS
Ga0307499_100691712	3300031184	Soil	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPAGDQLVCSEFCAQSLREEAQFLQKRAS
Ga0307500_102368031	3300031198	Soil	VSMSKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQALREEAQFVQKRAS
Ga0307469_106618292	3300031720	Hardwood Forest Soil	MKGPSLVTMNKRCAYCNEPFRVTDQGIEALSADNKLVCSEFCAQALREEAHLLQRRAS
Ga0307468_1001628582	3300031740	Hardwood Forest Soil	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREETQFVQKRAS
Ga0306923_123808352	3300031910	Soil	MQAPLAVSVAKRCAYCNEPFRITEQGVEACRIGDHYVCNEYCAQAISEEASMRRPGP
Ga0310913_109659071	3300031945	Soil	MQAPSAVLVAKRCAYCNEPFRITEQGVEACRIGDHYVCNEYCAQAISEEASMRRPGP
Ga0307470_100723922	3300032174	Hardwood Forest Soil	MKVPSLVSMSKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQALREETQFVQKRAS
Ga0307471_1014296561	3300032180	Hardwood Forest Soil	MKVPSKVPSLVSMNKRCAYCNEPFRITEHGIEALPADNQLVCSEFCAQALREETQFVQKRAS
Ga0307472_1006997702	3300032205	Hardwood Forest Soil	MKVPSLVSMSKRCAYCNEPFRITEQGIEALPADNQLVCSEFCAQALREEAQFLQKRAS
Ga0326723_0358143_236_412	3300034090	Peat Soil	MKVPSLVSMNRRCAYCNEPFRITEQGIEALPADNKLVCSEFCAQALREESQFAQKRAS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085273

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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