Metagenome / Metatranscriptome Family F085268

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085268
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	53 residues
Representative Sequence	MSVRNGDKARFGRLRKQKILLRKRIREMREAMENKTRTTIVASEQNGTTPLTLDPMG
Number of Associated Samples	71
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.29 %
% of genes near scaffold ends (potentially truncated)	30.63 %
% of genes from short scaffolds (< 2000 bps)	67.57 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.775 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (22.523 % of family members)
Environment Ontology (ENVO)	Unclassified (84.685 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (40.541 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.76% β-sheet: 0.00% Coil/Unstructured: 48.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00072	Response_reg	7.21
PF00118	Cpn60_TCP1	6.31
PF00076	RRM_1	4.50
PF04545	Sigma70_r4	4.50
PF04041	Glyco_hydro_130	1.80
PF07040	DUF1326	0.90
PF03979	Sigma70_r1_1	0.90
PF00069	Pkinase	0.90
PF00691	OmpA	0.90
PF00166	Cpn10	0.90
PF01381	HTH_3	0.90
PF13414	TPR_11	0.90
PF00589	Phage_integrase	0.90
PF01471	PG_binding_1	0.90
PF00535	Glycos_transf_2	0.90
PF03572	Peptidase_S41	0.90
PF13545	HTH_Crp_2	0.90
PF04542	Sigma70_r2	0.90
PF13432	TPR_16	0.90
PF04357	TamB	0.90
PF00196	GerE	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	6.31
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.60
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.80
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	1.80
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.90
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.90
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.90
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.90
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.77 %
Unclassified	root	N/A	25.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.77 %
Unclassified	root	N/A	25.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.77 %
Unclassified	root	N/A	25.23 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.36 %
Unclassified	root	N/A	25.23 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	29.73 %
Unclassified	root	N/A	25.23 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.23 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	24.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.22 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.23 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	24.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.22 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.23 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	24.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.22 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.23 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	24.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.22 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10184293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300000567\|JGI12270J11330_10202140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	677	Open in IMG/M
3300003218\|JGI26339J46600_10140895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300003296\|Ga0006840J48914_111916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	710	Open in IMG/M
3300004295\|Ga0068932_1334649	Not Available	692	Open in IMG/M
3300004401\|Ga0068980_1155426	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300004401\|Ga0068980_1160123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	682	Open in IMG/M
3300004470\|Ga0068967_1267442	Not Available	707	Open in IMG/M
3300004474\|Ga0068968_1471796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	574	Open in IMG/M
3300004476\|Ga0068966_1424443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	719	Open in IMG/M
3300004602\|Ga0068960_1261083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	859	Open in IMG/M
3300004607\|Ga0068948_1273063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300006860\|Ga0063829_1433852	Not Available	522	Open in IMG/M
3300009630\|Ga0116114_1194519	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	505	Open in IMG/M
3300009632\|Ga0116102_1002065	All Organisms → cellular organisms → Bacteria → Acidobacteria	7748	Open in IMG/M
3300009632\|Ga0116102_1029281	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300009643\|Ga0116110_1021080	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300009644\|Ga0116121_1026909	All Organisms → cellular organisms → Bacteria → Acidobacteria	1825	Open in IMG/M
3300009644\|Ga0116121_1047992	Not Available	1344	Open in IMG/M
3300009644\|Ga0116121_1089317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300009646\|Ga0116132_1112659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	834	Open in IMG/M
3300009762\|Ga0116130_1143015	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300011086\|Ga0138564_1027227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	947	Open in IMG/M
3300011086\|Ga0138564_1034006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300011110\|Ga0138578_1245490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	550	Open in IMG/M
3300014151\|Ga0181539_1022951	All Organisms → cellular organisms → Bacteria	3432	Open in IMG/M
3300014155\|Ga0181524_10079077	All Organisms → cellular organisms → Bacteria → Acidobacteria	1917	Open in IMG/M
3300014155\|Ga0181524_10440224	Not Available	562	Open in IMG/M
3300014155\|Ga0181524_10457985	Not Available	547	Open in IMG/M
3300014156\|Ga0181518_10004582	All Organisms → cellular organisms → Bacteria	12259	Open in IMG/M
3300014156\|Ga0181518_10017439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5092	Open in IMG/M
3300014156\|Ga0181518_10258933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	880	Open in IMG/M
3300014156\|Ga0181518_10481000	Not Available	590	Open in IMG/M
3300014158\|Ga0181521_10039907	All Organisms → cellular organisms → Bacteria → Acidobacteria	3393	Open in IMG/M
3300014162\|Ga0181538_10596024	Not Available	577	Open in IMG/M
3300014638\|Ga0181536_10508978	Not Available	523	Open in IMG/M
3300016730\|Ga0181515_1266333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1719	Open in IMG/M
3300017822\|Ga0187802_10043175	All Organisms → cellular organisms → Bacteria → Acidobacteria	1635	Open in IMG/M
3300017925\|Ga0187856_1147457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	889	Open in IMG/M
3300017934\|Ga0187803_10003999	All Organisms → cellular organisms → Bacteria → Acidobacteria	5825	Open in IMG/M
3300017935\|Ga0187848_10003252	All Organisms → cellular organisms → Bacteria → Acidobacteria	12099	Open in IMG/M
3300017935\|Ga0187848_10465088	Not Available	518	Open in IMG/M
3300017938\|Ga0187854_10079288	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300017946\|Ga0187879_10765816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300017988\|Ga0181520_10017814	All Organisms → cellular organisms → Bacteria	8391	Open in IMG/M
3300018007\|Ga0187805_10308491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	728	Open in IMG/M
3300018009\|Ga0187884_10110315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1188	Open in IMG/M
3300018019\|Ga0187874_10303904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300018021\|Ga0187882_1261540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	668	Open in IMG/M
3300018021\|Ga0187882_1335594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300018033\|Ga0187867_10254298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300018033\|Ga0187867_10813761	Not Available	506	Open in IMG/M
3300018035\|Ga0187875_10157743	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1267	Open in IMG/M
3300018035\|Ga0187875_10390386	Not Available	744	Open in IMG/M
3300018038\|Ga0187855_10297494	Not Available	944	Open in IMG/M
3300018040\|Ga0187862_10526743	Not Available	708	Open in IMG/M
3300018043\|Ga0187887_10265111	Not Available	1016	Open in IMG/M
3300018043\|Ga0187887_10427760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300018062\|Ga0187784_10057145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3160	Open in IMG/M
3300018062\|Ga0187784_10224700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1530	Open in IMG/M
3300018062\|Ga0187784_10237710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1483	Open in IMG/M
3300018086\|Ga0187769_10022337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4212	Open in IMG/M
3300018088\|Ga0187771_11107400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300018090\|Ga0187770_10164697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1695	Open in IMG/M
3300018090\|Ga0187770_10185249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1599	Open in IMG/M
3300019211\|Ga0187799_1203065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	630	Open in IMG/M
3300023090\|Ga0224558_1022556	Not Available	3134	Open in IMG/M
3300027625\|Ga0208044_1068979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300027825\|Ga0209039_10058426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1734	Open in IMG/M
3300027854\|Ga0209517_10004707	All Organisms → cellular organisms → Bacteria	17775	Open in IMG/M
3300027854\|Ga0209517_10010208	All Organisms → cellular organisms → Bacteria → Acidobacteria	10507	Open in IMG/M
3300027854\|Ga0209517_10027954	All Organisms → cellular organisms → Bacteria → Acidobacteria	4853	Open in IMG/M
3300027854\|Ga0209517_10273070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1001	Open in IMG/M
3300027905\|Ga0209415_10327308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300028450\|Ga0189898_1021574	Not Available	661	Open in IMG/M
3300030659\|Ga0316363_10408361	Not Available	527	Open in IMG/M
3300032069\|Ga0315282_10002605	All Organisms → cellular organisms → Bacteria	32928	Open in IMG/M
3300032160\|Ga0311301_12391503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	596	Open in IMG/M
3300032770\|Ga0335085_10037618	All Organisms → cellular organisms → Bacteria	6670	Open in IMG/M
3300032805\|Ga0335078_10027702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8408	Open in IMG/M
3300032805\|Ga0335078_11734961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300032805\|Ga0335078_12229979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	576	Open in IMG/M
3300032892\|Ga0335081_10705035	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223	Open in IMG/M
3300032892\|Ga0335081_11194289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300032893\|Ga0335069_10400459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1611	Open in IMG/M
3300033134\|Ga0335073_12114559	Not Available	509	Open in IMG/M
3300033158\|Ga0335077_10493388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1297	Open in IMG/M
3300033402\|Ga0326728_10000333	All Organisms → cellular organisms → Bacteria	190902	Open in IMG/M
3300033402\|Ga0326728_10009372	All Organisms → cellular organisms → Bacteria	23618	Open in IMG/M
3300033402\|Ga0326728_10012816	All Organisms → cellular organisms → Bacteria	18444	Open in IMG/M
3300033402\|Ga0326728_10028432	All Organisms → cellular organisms → Bacteria → Acidobacteria	9683	Open in IMG/M
3300033402\|Ga0326728_10047050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6454	Open in IMG/M
3300033402\|Ga0326728_10125019	All Organisms → cellular organisms → Bacteria → Acidobacteria	2933	Open in IMG/M
3300033402\|Ga0326728_10243636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1725	Open in IMG/M
3300033402\|Ga0326728_11188471	Not Available	508	Open in IMG/M
3300033405\|Ga0326727_10148426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	2780	Open in IMG/M
3300033405\|Ga0326727_10500454	All Organisms → cellular organisms → Bacteria → Acidobacteria	1058	Open in IMG/M
3300033405\|Ga0326727_10766379	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300033405\|Ga0326727_11090834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300033561\|Ga0371490_1001437	All Organisms → cellular organisms → Bacteria	12342	Open in IMG/M
3300033977\|Ga0314861_0003785	All Organisms → cellular organisms → Bacteria → Acidobacteria	14037	Open in IMG/M
3300033977\|Ga0314861_0009869	All Organisms → cellular organisms → Bacteria	6937	Open in IMG/M
3300034091\|Ga0326724_0570910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.15%
Aquatic	Environmental → Aquatic	46.85%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	46.85%
Soil	Environmental → Terrestrial → Soil	39.64%
Peat	Environmental → Terrestrial → Peat	13.51%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	45.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.51%
Lake	Environmental → Aquatic → Freshwater → Lake	0.90%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.51%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.90%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	22.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	19.82%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	12.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	10.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	9.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.11%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.70%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003296	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 41 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004295	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004401	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004470	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004474	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004602	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004607	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006860	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300011030	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 83 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011086	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011110	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019211	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028450	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101842932	3300000567	Peatlands Soil	MSARNGDNARFGRLRKHNILLRKRTREVRDAMENKTRTTIVASE*
JGI12270J11330_102021402	3300000567	Peatlands Soil	MSVRNGDKARFGRLRKHRILLRKRLREIRDAMGSKTTTTAIVAS
JGI26339J46600_101408952	3300003218	Bog Forest Soil	MSVRNGDKARFGRLRRQKILLRKCIREMRDAMKNKTTGTAI
Ga0006840J48914_1119161	3300003296	Peatlands Soil	MSVRNGDKARFGRLRKQRIQLRKRLREVRDATDGKTTTPAIAVSEHDSTASRSLKPAG*
Ga0062386_1001234592	3300004152	Bog Forest Soil	MSVRNGDKARFGRLRRQKILLRKCIREMRDAMKNKTTGTAIPGCKYDSPTSLTLDSIG*
Ga0068932_13346491	3300004295	Peatlands Soil	MSVRNGDKARFGRLRKQKILLRKRIREMREAMETKTRTSIVASE
Ga0068980_11554261	3300004401	Peatlands Soil	MSVRNGDKARFGRLRKQKILLRKRIREMREAMETKTRTSIVASEQN
Ga0068980_11601231	3300004401	Peatlands Soil	MSVRNGDKARFGRLRKHRILLRKRAREIRDAMGSKTATPAIAASEHDGTSSRSLKPIG*
Ga0068967_12674422	3300004470	Peatlands Soil	MSVRNGDKARFGRLRKQKILLRKRIREMREAMETKTRTSIVASEQNGTTPLTLVPMG*
Ga0068968_14717961	3300004474	Peatlands Soil	MSVRNGDKARFGRLRKQRILLRKRIREMRDATETKTARTTIAASESDGASSPSIKLMG*
Ga0068966_14244431	3300004476	Peatlands Soil	RNGDKARFGRLRKQRIRLRKRIREMREAMGTKTARTAIAASESDGTSSPSPQPMG*
Ga0068960_12610833	3300004602	Peatlands Soil	MSARNGDKSRFGRLRRQKILLRKRIREMRDATETKTARTTIAASESDGASSPSIKLMG*
Ga0068948_12730632	3300004607	Peatlands Soil	MSVRNGDKARFGRLRKQKILLRKRIREMREAMENKTRTSIVASEQNGTTPLTLVPMG*
Ga0063829_14338522	3300006860	Peatlands Soil	RNGDKARFGRLRKQKILLRKRIREMREAMETKTRTSIVASEQNGTTPLTLVPMG*
Ga0116108_10694552	3300009519	Peatland	MSVRNGDKARFGRLRRQKILLRKRIREMRDAMKNKTTGTAIPGCKYDSPTSLTLDSIG*
Ga0116114_10150155	3300009630	Peatland	MSVRNGDKARFGRLRRQKILLRKRIREMRDAMKNKTTGTAIPGCKYDSPTSLTLDS
Ga0116114_11945191	3300009630	Peatland	MSVRNGDKARFGRLRKHRILLRKRLREIRDAMESKTTS
Ga0116102_10020659	3300009632	Peatland	MSVRNGDKARFGRLRKHRILLRKRLREIRDAMGSKTTATAIVASEHDGTSSRSLKPIG*
Ga0116102_10292812	3300009632	Peatland	MSVRNGDKARFGRLRKHRILLRKRLREIRDAMESKTTSTVVAASDYDGTASRSLKPTG*
Ga0116110_10210804	3300009643	Peatland	MSVRNGDKARFGRLRKQKILLRKRLREIRDAMGSKTTPTVIAAPESDGTSSRSLKPTG*
Ga0116121_10269092	3300009644	Peatland	MSVRNGDKARFGRLRKHRILLRKRAREIRDTLGSKTATTAIATSENDGKASRSPKPLG*
Ga0116121_10479922	3300009644	Peatland	MSVKNGDKARFGRLRKQKILLRKRIREMREALENKTRTTIVASEQNGTTPLPLDPVG*
Ga0116121_10893173	3300009644	Peatland	MSVRNGDKARFGRLRKQKILLRKRIRELREAMQIKTRTTIVVSEQNGTTPLTLAPLG*
Ga0116132_11126591	3300009646	Peatland	MSVRNGDKARFGRLRKQRILLRKRIREVRDATDGKTTTPAIAASE
Ga0116130_11430151	3300009762	Peatland	MSVKNGDKARFGRLRKQKILLRKRIRELREAMETKTRTTTVASEQNGITPL
Ga0138603_1073652	3300011030	Peatlands Soil	MSVRNGDKARFGRLRRQKILLRKRIREMRDAMKNKITGTAIPGCKYDSPTSLTLDSIG*
Ga0138564_10272273	3300011086	Peatlands Soil	HLISSVEFAKEGIMSVRNGDKARFGRLRKQRILLRKRIREMRDATETKTARTTIAASESDGASSPSIKLMG*
Ga0138564_10340062	3300011086	Peatlands Soil	MSVRNGDKARFGRLRKQKILLRKRILEMREAMENKTRTSIVASEQNGTTPLTLVPM
Ga0138578_12454901	3300011110	Peatlands Soil	MSVRNGDKARFGRLRKHRILLRKRLREIRDAMGSKTTTTAIVASEHEGTSSRSLKPIG*
Ga0181539_10229512	3300014151	Bog	MSARNGDKARFGRLRKRKILLRKRIREMRDAMENKTTGTAIPVCK*
Ga0181524_100790773	3300014155	Bog	MSVRNGDKARFGRLRKHRILLRKRLREIRDAMGTKTTTTAIAASEHDSTSSRSLKPLG*
Ga0181524_104402241	3300014155	Bog	MSVRNGDKARFGRLRKHRILLRKRAREIRDAMGSKTATPAIAASEHDGTSSRSLK
Ga0181524_104579851	3300014155	Bog	MSIRNGDKARFGRLRKQRILLRKRIREMRDATETKTARTTIAA
Ga0181518_100045827	3300014156	Bog	MSVRNGDKARFGRLRKQKILLRKRIREMREAMENKTRTTIVASEQNGTTPLTLDPMG*
Ga0181518_100174397	3300014156	Bog	MSVRNGDKARFGRLRKHRILLRKRAREIRDAMGSKTATPAIAASEHDGTSSRSLKPMG*
Ga0181518_102589332	3300014156	Bog	MSVRNGDKARFGRLRKQRILLRKRIREVRDATDGKTTTPAIAASEHDGTSSRSLKPAG*
Ga0181518_104810001	3300014156	Bog	NGDKARFGRLRKQKILLRKRIREMREAMENKNRATIVASEQNGATPLTLDPVG*
Ga0181521_100399076	3300014158	Bog	MSVRNGDKARFGRLRKHRILLRKRAREIRDAMGSKTATPAIAASEHDGTASRSLKPMG*
Ga0181538_105960242	3300014162	Bog	MSIKNGDKARFGRLRKQKILLRKRIREMREAMENKNRATIVASEQNGATPLTLDPVG*
Ga0181536_105089782	3300014638	Bog	MSVRNGDKARFGRLRKQKILLRKRIRELREAMEIKTRTTIVASEQNGTTPLTLQPMG*
Ga0181515_12663335	3300016730	Peatland	MSVRNGDKARFGRLRKQRILLRKRIREVRDATDGKTTTPAIAASEHDGTSSRSLKPAG
Ga0187802_100431753	3300017822	Freshwater Sediment	MSERNGDKARFGRLRKHKIFLRKRMREQRDATEAKTATTAIAASEYQREKS
Ga0187856_10093208	3300017925	Peatland	MSVRNGDKARFGRLRRQKILLRKRIREMRDAMKNKTTGTAIPGCKYDSPTSLTLDSIG
Ga0187856_11474572	3300017925	Peatland	MSVRNGDKARFGRLRKQRILLRKRIREVRDATDGKTTTPAIAASEHDSTSSRSLKPAG
Ga0187803_1000399910	3300017934	Freshwater Sediment	MSARNGDKARFGRLRKRRILLRKRIRKLRDTMESKTANAVIAASK
Ga0187848_100032526	3300017935	Peatland	MSVRNGDKARFGRLRKHRILLRKRLREIRDAMGSKTTATAIVASEHDGTSSRSLKPIG
Ga0187848_104650881	3300017935	Peatland	MSVRNGDKARFGRLRKQKVLLRKRIRELREAMEIKTRTTIVAAEQNGTTPLTLQPMG
Ga0187854_100592582	3300017938	Peatland	MSVRNGDKARFGRLRRQKILLRKRIREMRDAMKNKTTGTAIPVCKYDSPTSLTLDSIG
Ga0187854_100792881	3300017938	Peatland	MSVRNGDKARFGRLRKHRILLRKRLREIRDAMESKTTSTVVAASDYDGTASRSLKPTG
Ga0187879_107658162	3300017946	Peatland	MSVRNGDKARFGRLRKQKILLRKRIREMREAMENKNRTTIVASEQNGATPLTLDPVG
Ga0181520_100178147	3300017988	Bog	MSIKNGDKARFGRLRKQKILLRKRIREMREAMENKNRATIVASEQNGATPLTLDPVG
Ga0187805_103084911	3300018007	Freshwater Sediment	MSERNGDKARFGRLRKHKIFLRKRMREQRDATEAKTATTAIAAS
Ga0187884_101103151	3300018009	Peatland	MSVRNGDKARFGRLRKQRILLRKRIREVRDATDGKTTTPAI
Ga0187873_11550402	3300018013	Peatland	MSARNGDKARFGRLRKQKILLRKRIREMRDAMKNKTTGTAIPGCKYDSPTSLTLDSIG
Ga0187874_103039042	3300018019	Peatland	MSVKNGDKARFGRLRKQKILLRKRIRELREAMQIKTRTTIVVSEQNGTTPLTLAPLG
Ga0187882_12615402	3300018021	Peatland	MSVRNGDKARFGRLRKQRILLRKRIREVRDATDGKTTTPAIAASENDSTSSRSLKPAG
Ga0187882_13355942	3300018021	Peatland	MSVRNGDKARFGRLRKQKILLRKRIREMREAMENKTRTTIVASEQNGTTPLTL
Ga0187867_102542982	3300018033	Peatland	MSVKNGDKARFGRLRKQKILLRKRIREMREALENKTRTTIVASEQNGTTPLPLDPVG
Ga0187867_108137612	3300018033	Peatland	GVMSVRNGDKARFGRLRKQKILLRKRIREMREAMENKTRTTIVASEQNGTTPLTLDPMG
Ga0187875_101577431	3300018035	Peatland	MSVRNGDKARFGRLRKHRILLRKRAREIRDTLGSKTATTAIATSENDGKASRSPKPLG
Ga0187875_103903861	3300018035	Peatland	MSVKNGDKARFGRLRKQKILLRKRIRELREAMETKTRTTTVASEQNGITPLTLDPLG
Ga0187855_102974942	3300018038	Peatland	MSVRNGDKARFGRLRKQKILLRKRIRELREAMQIKTRTTIVVSEQNGTTPLTLAPLG
Ga0187862_102182902	3300018040	Peatland	MSVRNGDNARFGRLRRQKILLRKRIREMRDAMKNKTTGTAIPGCKYDSPTSLTLDSIG
Ga0187862_105267431	3300018040	Peatland	MSVKNGDKARFGRLRKQKILLRKRIREMREAMENKNRTTIVASEQNGATPLTLDPVG
Ga0187887_102651111	3300018043	Peatland	GGVMSVKNGDKARFGRLRKQKILLRKRIREMREALENKTRTTIVASEQNGTTPLPLDPVG
Ga0187887_104277601	3300018043	Peatland	MSVKNGDKARFGRLRKQKILLRKRIRELREAMENKARTTMIASEQNGATPL
Ga0187784_100571453	3300018062	Tropical Peatland	MSARNGDKARFGRLRKHRILLRKRMREQRDAREAKTATTAIAADGRRGI
Ga0187784_102247003	3300018062	Tropical Peatland	MSVRNGDKARFGRLRKRKILLRKRVREILEAMVNKTPKRAMAAPR
Ga0187784_102377102	3300018062	Tropical Peatland	MSVRNGDKARFGRLRKHRILLRKRLREMRDAMESKRGRTAIAASEYDGTPPPSPKLMG
Ga0187769_100223373	3300018086	Tropical Peatland	MSARNGDKARFGRLRKHRILLRKRMREQRDAREAKTATTAIAASEYQREKS
Ga0187771_111074001	3300018088	Tropical Peatland	MSVRNGDKARFGRLRKHRILLRKRLREMRGAMESKTGRTAIAASEYDGTSP
Ga0187770_101646972	3300018090	Tropical Peatland	MSARNGDKARFGRLRKHRILLRKRMREQRDAREAK
Ga0187770_101852493	3300018090	Tropical Peatland	MSVRNGDKARFGRLRKRKILLRKRVREILEAMADKTPKRALAAPR
Ga0187799_12030651	3300019211	Peatland	MSARNGDKARFGRLRKHRILLRKRMREQRDAREAKTAPTAIAASEYQREKS
Ga0224558_10225565	3300023090	Soil	RKRCVPERNKEGVMSVKNGDKARFGRLRKQKILLRKRIRELREAMETKTRTTTVASEQNGITPLTLDPLG
Ga0208044_10689791	3300027625	Peatlands Soil	MSVRNGDKARFGRLRKQKILLRKRIREMREAMETKTRTSIVASEQNGTTPLTLVPMG
Ga0209039_100584264	3300027825	Bog Forest Soil	MSVRNGDKARFGRLRRQKILLRKCIREMRDAMKNKTTGTAIPGC
Ga0209517_100047079	3300027854	Peatlands Soil	MSVRNGDKARFGRLRKQRIQLRKRLREVRDATDGKTTTPAIAVSEHDSTASRSLKPAG
Ga0209517_100102085	3300027854	Peatlands Soil	MSVRNGDKARFDRLRKRKILLRKRSREMRDAMASKTTRTAIAVPG
Ga0209517_100279543	3300027854	Peatlands Soil	MSVRNGDKARFGRLRKQRILLRKRIREMRDATETKTARTTIAASESDGASSPSIKLMG
Ga0209517_102730701	3300027854	Peatlands Soil	MSVRNGDKARFGRLRKHRILLRKRAREIRDAMGSKTATPAIAASEHDG
Ga0209415_103273083	3300027905	Peatlands Soil	MSVRNGDKARFGRLRRQKILLRKRIREMRDAMKNKTTGTAI
Ga0189898_10215741	3300028450	Peatlands Soil	RNGDKARFGRLRKQKILLRKRIREMREAMETKTRTSIVASEQNGTTPLTLVPMG
Ga0316363_104083611	3300030659	Peatlands Soil	MSVRNGDKARFGRLRKQRILLRKRIREMRDATETKTARTTIAASESDGAS
Ga0315282_1000260512	3300032069	Sediment	MSVRNGDKARFGRLRKHRILLRKRLREMRDAMESKTAKAVIAASK
Ga0311301_123915031	3300032160	Peatlands Soil	MSVRNGDKARFGRLRKHRILLRKRAREIRDAMGSKTATPAIAASEHDGTSSRSLKP
Ga0335085_100376184	3300032770	Soil	MSARNGDKSRFGRLRRQKILLRKSIRELRQAMHNKTTGQPAAIPSKVA
Ga0335078_100277023	3300032805	Soil	MSVRNGDKARFGRLRKQKILLRKRIREIRDAMGSKATTTAIASSEHDATSSRSLKPTG
Ga0335078_117349612	3300032805	Soil	MSVRNGDKARFGRLRKQKILLRKRIREMREAMENKTRTTIVASEQNGTPPLALEPLG
Ga0335078_122299791	3300032805	Soil	MSVRNGDKARFGRLRKHRILLRKRIREIRDARGSKTTTIAIAA
Ga0335081_107050352	3300032892	Soil	MSVRNGDKARFGRLRKHRILLRKRIREIRDAMGSKTTTIAIAASEHEREKS
Ga0335081_111942892	3300032892	Soil	MSVRNGDKARFGRLRKQKIHLRKRIREMREAVENKTQTTIVAYEQNGTTRLTLQPIG
Ga0335069_104004592	3300032893	Soil	MSARNGDKARFGRLRIRKILLRKRIRELRDAMEKKTAAPEILAPR
Ga0335073_121145591	3300033134	Soil	MSVRNGDKARFGRLRKHRILLRKRAREIQGAMASKAAAPATATPESDGSSSRSLKPMG
Ga0335077_104933882	3300033158	Soil	MSVRNGDKGRFGRLRKHRILLRKRIREIRDAMGSKTTTIAIAASEHEREKS
Ga0326728_10000333151	3300033402	Peat Soil	MSARNGDKARFGRLRKHRILLRKRLREIRDAVESKTTTTAIAASEYDGTSSRALKPMG
Ga0326728_1000937213	3300033402	Peat Soil	MSVRNGDKARFGRLRKHRILLRKRLREIRDAMASKTTTAAIVASEHDSTSSRSLKPIG
Ga0326728_100128163	3300033402	Peat Soil	MSIRNGDKARFGRLRKQRILLRKRIREMRDATETKTARTTIPASESDGASSPSIKLMG
Ga0326728_100284325	3300033402	Peat Soil	MSVRNGDKARFGRLRKQKILLRKRIREMREAMENKTRTSMVASEQNGTTPLTLVPMG
Ga0326728_100470503	3300033402	Peat Soil	MSVRNGDKARFGRLRKQKILLRKRIREMREAMENKTRTTIVASEQNGTTPLTLDPMG
Ga0326728_101250192	3300033402	Peat Soil	MSVRNGDKARFGRLRKYRILLRKRAREIRDAMGSKTATPAIAASEHDGTASRSLKLMG
Ga0326728_102436361	3300033402	Peat Soil	MSERNGDKARFGRLRKHRILLRKRLREIRDAMETKTT
Ga0326728_111884712	3300033402	Peat Soil	MSIRNGDKARFGRLRKQRNLLRKHIRDARDAMENKAARTAIPASEYDGTPAVSLKPIG
Ga0326727_101484261	3300033405	Peat Soil	MSVRNGDKARFGRLRKYRILLRKRAREIRDAMGSKTATPAIAASEHDGTSSRSLKPMG
Ga0326727_105004542	3300033405	Peat Soil	MSARNGDKARFGRLRKQRILLRKRIREMRDAMESKTTTIAIGASEYDSASSRPLKPMGEEVGQAEVR
Ga0326727_107663791	3300033405	Peat Soil	MSVRNGDKARFGRLRKGKILLRKHLREMRDAMENKTARTAIAASEHDGTTSPSLKPMG
Ga0326727_110908341	3300033405	Peat Soil	MSARNGDKARFGRLRRQKILLRKRIREMQDAMQTKAA
Ga0371490_100143713	3300033561	Peat Soil	MSVRNGDKARFGRLRKHRILLRKRLREIRDAVESKTTTTAIAASEYDGTSSRALKPMG
Ga0314861_0003785_12140_12295	3300033977	Peatland	MSARNGDKARFGRLRKHRILLRKRLREIRDAMESKTTTRAIAASEYEREKS
Ga0314861_0009869_497_634	3300033977	Peatland	MSERNGDKARFGRLRKRRIFLRKRIREIRDAMQSTKARTAIRPSK
Ga0326724_0570910_2_184	3300034091	Peat Soil	GIMSIRNGDKARFGRLRKQRILLRKRIREMRDATETKTARTTIPASESDGASSPSIKLMG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085268

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences