Metagenome Family F085261

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085261
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	113 residues
Representative Sequence	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELREPLERLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPGPAG
Number of Associated Samples	93
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.51 %
% of genes near scaffold ends (potentially truncated)	18.92 %
% of genes from short scaffolds (< 2000 bps)	70.27 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.099 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (24.324 % of family members)
Environment Ontology (ENVO)	Unclassified (36.036 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.16% β-sheet: 0.00% Coil/Unstructured: 41.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.128.1.0: automated matches	d5c05a2	5c05	0.61191
a.128.1.0: automated matches	d6a1ia2	6a1i	0.601
a.128.1.0: automated matches	d3n0fa2	3n0f	0.59591
a.268.1.1: PTPA-like	d2ixna1	2ixn	0.5841
a.128.1.0: automated matches	d4fjqa2	4fjq	0.58068

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01022	HTH_5	36.94
PF01597	GCV_H	11.71
PF04143	Sulf_transp	9.91
PF12697	Abhydrolase_6	8.11
PF02754	CCG	5.41
PF02635	DrsE	4.50
PF00462	Glutaredoxin	0.90
PF06271	RDD	0.90
PF13183	Fer4_8	0.90
PF01206	TusA	0.90
PF00581	Rhodanese	0.90
PF07521	RMMBL	0.90
PF13241	NAD_binding_7	0.90
PF13187	Fer4_9	0.90
PF01494	FAD_binding_3	0.90
PF13624	SurA_N_3	0.90
PF07992	Pyr_redox_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0509	Glycine cleavage system protein H (lipoate-binding)	Amino acid transport and metabolism [E]	11.71
COG2391	Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains	General function prediction only [R]	9.91
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	5.41
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	5.41
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.80
COG0425	Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.90
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.90
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.90
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.90
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	45.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.73 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	42.34 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.70 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.80 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	38.74 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.70 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	2.70 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.80 %
Betaproteobacteria bacterium SG8_39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	38.74 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2.70 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	2.70 %
Defluviimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Defluviimonas	1.80 %
Betaproteobacteria bacterium SG8_39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	38.74 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	2.70 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	1.80 %
unclassified Defluviimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Defluviimonas → unclassified Defluviimonas	1.80 %
Betaproteobacteria bacterium SG8_39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	38.74 %
Betaproteobacteria bacterium SCGC AG-212-J23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	2.70 %
Defluviimonas sp. 20V17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Defluviimonas → unclassified Defluviimonas → Defluviimonas sp. 20V17	1.80 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	1.80 %
Betaproteobacteria bacterium SG8_39	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	0.90 %
Unclassified	root	N/A	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003267\|soilL1_10048892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	4019	Open in IMG/M
3300003465\|P52013CM_1005517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9368	Open in IMG/M
3300003465\|P52013CM_1055169	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300004009\|Ga0055437_10002674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3098	Open in IMG/M
3300004013\|Ga0055465_10085741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300004019\|Ga0055439_10324588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	510	Open in IMG/M
3300004062\|Ga0055500_10049316	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300004157\|Ga0062590_100418715	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300004463\|Ga0063356_100158686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2594	Open in IMG/M
3300004463\|Ga0063356_102347260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	815	Open in IMG/M
3300004463\|Ga0063356_103843065	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300004463\|Ga0063356_106160463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	514	Open in IMG/M
3300005183\|Ga0068993_10008316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	2252	Open in IMG/M
3300005445\|Ga0070708_101654732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	595	Open in IMG/M
3300005876\|Ga0075300_1015100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	923	Open in IMG/M
3300005895\|Ga0075277_1081989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	532	Open in IMG/M
3300005897\|Ga0075281_1070573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	573	Open in IMG/M
3300006876\|Ga0079217_10315753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	875	Open in IMG/M
3300006876\|Ga0079217_10490574	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300006918\|Ga0079216_11589273	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300007004\|Ga0079218_10156627	All Organisms → cellular organisms → Bacteria → Proteobacteria	1672	Open in IMG/M
3300009157\|Ga0105092_10091084	All Organisms → cellular organisms → Bacteria → Proteobacteria	1666	Open in IMG/M
3300009157\|Ga0105092_10095301	All Organisms → cellular organisms → Bacteria → Proteobacteria	1628	Open in IMG/M
3300009171\|Ga0105101_10638024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	530	Open in IMG/M
3300009444\|Ga0114945_10041992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2475	Open in IMG/M
3300009444\|Ga0114945_10082387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1789	Open in IMG/M
3300009444\|Ga0114945_10339587	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300009597\|Ga0105259_1002930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3040	Open in IMG/M
3300011407\|Ga0137450_1018655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1132	Open in IMG/M
3300011409\|Ga0137323_1003453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3977	Open in IMG/M
3300011410\|Ga0137440_1012366	Not Available	1378	Open in IMG/M
3300011421\|Ga0137462_1010244	All Organisms → cellular organisms → Bacteria → Proteobacteria	1716	Open in IMG/M
3300011425\|Ga0137441_1007511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2044	Open in IMG/M
3300011428\|Ga0137456_1000146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Defluviimonas → unclassified Defluviimonas → Defluviimonas sp. 20V17	7344	Open in IMG/M
3300011434\|Ga0137464_1048026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1193	Open in IMG/M
3300011441\|Ga0137452_1012731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2564	Open in IMG/M
3300011442\|Ga0137437_1007449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3840	Open in IMG/M
3300011443\|Ga0137457_1138334	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300012034\|Ga0137453_1105070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	558	Open in IMG/M
3300012035\|Ga0137445_1053987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	788	Open in IMG/M
3300012035\|Ga0137445_1099064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	590	Open in IMG/M
3300012038\|Ga0137431_1106418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	789	Open in IMG/M
3300012039\|Ga0137421_1020679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1609	Open in IMG/M
3300012040\|Ga0137461_1181890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	619	Open in IMG/M
3300012041\|Ga0137430_1219437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	544	Open in IMG/M
3300012163\|Ga0137355_1071025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	669	Open in IMG/M
3300012166\|Ga0137350_1033595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	977	Open in IMG/M
3300012227\|Ga0137449_1007823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1909	Open in IMG/M
3300012228\|Ga0137459_1007042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3128	Open in IMG/M
3300012231\|Ga0137465_1029126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1622	Open in IMG/M
3300014265\|Ga0075314_1053206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300014861\|Ga0180061_1049371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	688	Open in IMG/M
3300014865\|Ga0180078_1058835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	654	Open in IMG/M
3300014872\|Ga0180087_1040159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	869	Open in IMG/M
3300015254\|Ga0180089_1097318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	610	Open in IMG/M
3300017939\|Ga0187775_10000510	All Organisms → cellular organisms → Bacteria → Proteobacteria	9458	Open in IMG/M
3300017944\|Ga0187786_10533086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	539	Open in IMG/M
3300018058\|Ga0187766_10075847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2009	Open in IMG/M
3300018059\|Ga0184615_10620328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	561	Open in IMG/M
3300018060\|Ga0187765_10000929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11079	Open in IMG/M
3300018068\|Ga0184636_1161360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	789	Open in IMG/M
3300018083\|Ga0184628_10210131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1019	Open in IMG/M
3300018084\|Ga0184629_10092331	All Organisms → cellular organisms → Bacteria → Proteobacteria	1469	Open in IMG/M
3300019458\|Ga0187892_10000059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	235957	Open in IMG/M
3300021081\|Ga0210379_10203146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300021081\|Ga0210379_10467882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	559	Open in IMG/M
3300021090\|Ga0210377_10063443	All Organisms → cellular organisms → Bacteria → Proteobacteria	2528	Open in IMG/M
3300022563\|Ga0212128_10027412	All Organisms → cellular organisms → Bacteria → Proteobacteria	3673	Open in IMG/M
3300022563\|Ga0212128_10226258	All Organisms → cellular organisms → Bacteria → Proteobacteria	1187	Open in IMG/M
3300025157\|Ga0209399_10020056	All Organisms → cellular organisms → Bacteria → Proteobacteria	2792	Open in IMG/M
3300025165\|Ga0209108_10094034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1621	Open in IMG/M
3300025324\|Ga0209640_10004511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12185	Open in IMG/M
3300025558\|Ga0210139_1128465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	516	Open in IMG/M
3300025569\|Ga0210073_1014124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1549	Open in IMG/M
3300025955\|Ga0210071_1000217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5109	Open in IMG/M
3300025957\|Ga0210089_1004290	All Organisms → cellular organisms → Bacteria → Proteobacteria	1382	Open in IMG/M
3300025965\|Ga0210090_1000313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5224	Open in IMG/M
3300027364\|Ga0209967_1053360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	623	Open in IMG/M
3300027378\|Ga0209981_1042077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	684	Open in IMG/M
3300027462\|Ga0210000_1050041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	670	Open in IMG/M
3300027471\|Ga0209995_1003379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2542	Open in IMG/M
3300027471\|Ga0209995_1041159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	780	Open in IMG/M
3300027543\|Ga0209999_1059842	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300027722\|Ga0209819_10077126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SCGC AG-212-J23	1157	Open in IMG/M
3300027886\|Ga0209486_10551376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	724	Open in IMG/M
3300028592\|Ga0247822_10571912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	902	Open in IMG/M
3300028592\|Ga0247822_10736747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300028812\|Ga0247825_10000822	All Organisms → cellular organisms → Bacteria → Proteobacteria	20095	Open in IMG/M
3300030606\|Ga0299906_10219802	All Organisms → cellular organisms → Bacteria → Proteobacteria	1497	Open in IMG/M
3300030620\|Ga0302046_10730850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	800	Open in IMG/M
3300031229\|Ga0299913_10173787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2129	Open in IMG/M
3300031548\|Ga0307408_101802388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	585	Open in IMG/M
3300031548\|Ga0307408_102513317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	501	Open in IMG/M
3300031716\|Ga0310813_10888479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	807	Open in IMG/M
3300031903\|Ga0307407_11720312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	500	Open in IMG/M
3300031965\|Ga0326597_10160742	All Organisms → cellular organisms → Bacteria → Proteobacteria	2672	Open in IMG/M
3300031995\|Ga0307409_101993341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	610	Open in IMG/M
3300031995\|Ga0307409_102026863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	605	Open in IMG/M
3300032144\|Ga0315910_10511855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_39	926	Open in IMG/M
3300032157\|Ga0315912_10043988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3548	Open in IMG/M
3300032157\|Ga0315912_10047235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	3417	Open in IMG/M
3300032770\|Ga0335085_10152571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2895	Open in IMG/M
3300032770\|Ga0335085_10661632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1167	Open in IMG/M
3300033004\|Ga0335084_10083134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Defluviimonas → unclassified Defluviimonas → Defluviimonas sp. 20V17	3320	Open in IMG/M
3300033417\|Ga0214471_10000635	All Organisms → cellular organisms → Bacteria → Proteobacteria	28923	Open in IMG/M
3300033513\|Ga0316628_101107497	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300033551\|Ga0247830_10000642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12975	Open in IMG/M
3300033551\|Ga0247830_10465980	All Organisms → cellular organisms → Bacteria → Proteobacteria	991	Open in IMG/M
3300034147\|Ga0364925_0037316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1616	Open in IMG/M
3300034177\|Ga0364932_0111180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1040	Open in IMG/M
3300034692\|Ga0373917_0046369	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.59%
Host-Associated	Host-Associated	13.51%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	48.65%
Terrestrial	Environmental → Terrestrial	36.94%
Plants	Host-Associated → Plants	13.51%
Bioremediation	Engineered → Bioremediation	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	34.23%
Sediment	Environmental → Aquatic → Sediment	27.93%
Marine	Environmental → Aquatic → Marine	9.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.01%
Freshwater	Environmental → Aquatic → Freshwater	6.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	5.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.50%
Floodplain	Environmental → Terrestrial → Floodplain	1.80%
Cave	Environmental → Terrestrial → Cave	0.90%
Metal	Engineered → Bioremediation → Metal	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	27.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.81%
Wetlands	Environmental → Aquatic → Marine → Wetlands	9.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.01%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	5.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.50%
Loam	Environmental → Terrestrial → Soil → Loam	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.80%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	27.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.81%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.31%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	5.41%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.50%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.80%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	1.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.90%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	24.32%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	9.01%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	5.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.70%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.80%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.90%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.90%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011410	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012163	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014861	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025157	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025965	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034692	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilL1_100488922	3300003267	Sugarcane Root And Bulk Soil	VRLIAQLEAALKDESSLFRAQLLREDIARLRKLEALAKSAADAEAFRKAGMRIGWTQGDARTHEIREPLLRLLDAVYAAREEETVAAWEALHRARMEKLVGCLSTPVPKPVDP*
P52013CM_10055176	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MAVVKLIGELEKLIALEESLFRAQLLREDVARLRKLEALRQPAADLEAFRKAGMRLGWTQGDARTHELREPLLALLDSVYAGDDRRIGQSWQALHRARMEKLVGCLSTPVPKPLD*
P52013CM_10551692	3300003465	Ore Pile And Mine Drainage Contaminated Soil	MQLIADLERALAAEQSLFRAQLLREDIARLRKLDELRRSVPDLAAFEKAGMRLGWTQGDARTHELREPLQQLLREIYEGNEARITPAWNELHRLRMERLLGCLSTPVPKPAA*
Ga0055437_100026745	3300004009	Natural And Restored Wetlands	MQLLADLERALGAEQSLFRAQLLREDIARLRKLEALTRSAADAEAFKKAGMRLGWTQGDARTAELREPLEALLEAILSGEEARITTAWNELHRARMERLLGCLSTPVPKPAG*
Ga0055465_100857413	3300004013	Natural And Restored Wetlands	MQLLEKLSLLLSEETSLFRAQLLREDIARLQKLQQLARQAPDAEAFRKSGMRIGWTQGDARTHELREPLVRLLDAVYASQEEEILLAWEALHRARMERLVGCLSTPVPKPAG*
Ga0055439_103245882	3300004019	Natural And Restored Wetlands	DLERALGAEQSLFRAQLLREDIARLRKLEALTRSAADAEAFKKAGMRLGWTQGDARTAELREPLEALLEAILSGEEARITTAWNELHRARMERLLGCLSTPVPKPAG*
Ga0055500_100493162	3300004062	Natural And Restored Wetlands	MRLVAELERALETEESPFRAQLLKEDIARLRKLEALTRSAPDAEAFKKAGMRLGWTQGDARTAELREPLEALLEAILSGEEARITTAWNELHRARMERLLGCLSTPVPKPAG*
Ga0062590_1004187153	3300004157	Soil	MQLLHDLERLLAGEESLFRKQLLREDIARLRKLEALAQSSSDLEAFKRAGMRLGWTQGDARTAELRAPLEALLEAVHKGEEQRIGEAWRELHRTRMERLVGCLATPVPKPDGE*
Ga0063356_1001586864	3300004463	Arabidopsis Thaliana Rhizosphere	MRGLYNLRMQLIADLERLLAAEESLFRRQLLREDIGRLRRLEELRRASSDLEAFKQAGMRLGWTQGDARTAELAEPLAAFLQEIYEGNEARITQAWNELHRVRMERLLGCLATPAPKPVA
Ga0063356_1023472602	3300004463	Arabidopsis Thaliana Rhizosphere	MQLIARLEELLRSEQSLFRAQLLREDVARLRKLQALAESAPDLEAFKKAGMRIGWTQGDARTHELAEPLTRLLEAVYASREEELLPAWDALHRARMERLVGCLSTPVPKPVD*
Ga0063356_1038430652	3300004463	Arabidopsis Thaliana Rhizosphere	MQLIAHLEHLVGSEESLFRAQLLREDIARLRKLQELARKAPDAEAFKKSGMRIGWTQGDARTHELREPLGRLLEAVYAAREEDIVRAWEALHRVRMERLVGCLSTPVPKPVD*
Ga0063356_1061604631	3300004463	Arabidopsis Thaliana Rhizosphere	GKEHEEDSHGADYTISAMQLLHDLERLLAGEESLFRKQLLREDIARLRKLEALAQSSSDLEAFKRAGMRLGWTQGDARTAELRAPLEALLEAVHKGEEQRIGEAWQELHRTRMERLVGCLATPVPKPDGE*
Ga0068993_100083165	3300005183	Natural And Restored Wetlands	LGAEQSLFRAQLLREDIARLRKLEALTRSAADAEAFKKAGMRLGWTQGDARTAELREPLEALLEAILSGEEARITTAWNELHRARMERLLGCLSTPVPKPAG*
Ga0070708_1016547322	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLEDLERLVAQEQSLFRAQLLREDIARLRKLQELARTTQDAAAFKKAGMRIGWTQGDARTHELDEPLGQLLEAVYAFELGKRDPQQEADIVECWRELHRIRMERLLGCLATPVPKPPD
Ga0075300_10151001	3300005876	Rice Paddy Soil	MRLLQELERIVAGEESLFRRQLLREDIARLRTLEALARSSADLEAFQKAGMRLGWTQGDARTHELREPLERFLAAVYDAEKVTPDAAGVTQAWNELHRVRMERLLGC
Ga0075277_10819891	3300005895	Rice Paddy Soil	MARLYNLRMQLIAELERLLAAEESLFRRQLLREDIARLGKLQALAESSPDLEAFTKAGMRLGWTQGDARTSEIAPQVRSLLEAVHAHDEARITGAWNELHRVRMERLLGCLSTPVPKPAG
Ga0075281_10705732	3300005897	Rice Paddy Soil	MQLIAELERLLAAEESLFRRQLLREDIARLGKLQALAESSPDLEAFTKAGMRLGWTQGDARTSEIAPQVRSLLEAVHAHDEAGITGAWNELHRVRMERLLGCLSTPVPKPAG*
Ga0079217_103157531	3300006876	Agricultural Soil	VKLIEDLESLIAKEPSMFRAQLLREDVARLRKLQALAATAPDAAAFRKAGARIGWTQGDARTHELGEPLERLLAAVYAFEKDSAPEAPIIAAWEALHRARMEKLVGCLSTPVPRP
Ga0079217_104905742	3300006876	Agricultural Soil	MQLLEKLSLLLSEETSLFRAQLLREDIARLQKLQQLARQAPDAEAFRKSGMRIGWTQGDARTHELREPLERLLDAVFASQEEEILLAWEALHRARMERLVGCLSTPVPRPAG*
Ga0079216_115892731	3300006918	Agricultural Soil	MQLLEKLSLLLSEETSLFRAQLLREDIARLQKLQQLARQAPDAEAFRKSGMRIGWTQVDARTHELREPLERLLDAVYASQEEEILLAWEALHRARMERLVGCLSTPVPKPAG*
Ga0079218_101566272	3300007004	Agricultural Soil	VKLIEDLESLIAKEPSMFRAQLLREDVARLRKLQALAATAPDAAAFRKAGARIGWTQGDARTHELGEPLERLLAAVYAFEKDSAPEAPIIAAWEALHRARMEKLVGCLSTPVPRPVD*
Ga0105092_100910842	3300009157	Freshwater Sediment	MKLIAALEALIQKEQSLFRAQLLREDVARLRKLQELARTAKDAEAFRKSGMRIGWTQGDARTHELREPLERLLAAVYALEKDAGPEAPTVEAWEALHRSRMEKLVGCLSIPVPKPVD*
Ga0105092_100953012	3300009157	Freshwater Sediment	MELIERLEALVGKEESLFRAQLLREDIARLTRLQELARTAKDAEAFRKSGMRIGWTQGDARTHELREPLERLLAAVYAFEKDAAPEAPVVEAWEALHRSRMEKLVGCLSTPVPKPLD*
Ga0105101_106380241	3300009171	Freshwater Sediment	MQLVRDLEHLLESEESLFRAQLLREDLARLGKLRALAQAEPDLGAFMKSGMRLGWTQGDSRTEELREVLMPLLAAVHAFEKGKRDAQQETLIVEAWRTLARVRMERLVGCLSTPVPRPED
Ga0114945_100419921	3300009444	Thermal Springs	MQLIEDLAGWAAKETSLFRAQLLREDIARLRKLQELAKTAPDEPAFRKSGMRIGWTQGDARTHELREPLACLLEAVYAFERNSAPEAPIAEAWEALHRARMERLVGCLSTPVPKPVD*
Ga0114945_100823875	3300009444	Thermal Springs	MQLIGRLELLVGKEESPFRAQLLREDVARLRKLQELAKAAPDEPAFRKSGMRIGWTQGDARTHELREPLERLLGAVYAFERGKRDAAQEALIAEAWEALHRARMERLVGCLSTPVPKPVD
Ga0114945_103395872	3300009444	Thermal Springs	MQLIGRLELLVGKEESPFRAQLLREDLARLRKLQELARTAPDEPAFKKSGMRIGWTQGDARTHELAEPLGRLLAAVYRFVREGAPEAPIAEAWEAVHRARMEKLVGCLSTPVPKPAD*
Ga0105259_10029305	3300009597	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVAAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPKPAG*
Ga0137450_10186552	3300011407	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVAAGMRIGWTQGDTRTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPGPAG*
Ga0137323_10034533	3300011409	Soil	VRLIADLENLLKEEQSLFRGQLLREDIARLRKLQELVKVAPDIAAFKKSGMRIGWTQGDARTHELREPLERLLDAFYAGNEELVADAWQALHRARMEKLVGCLSTPVPRPAD*
Ga0137440_10123662	3300011410	Soil	MQLLADLERALAAEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVAAGMRIGWTQGDTRTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPRPAG*
Ga0137462_10102442	3300011421	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPGPAG*
Ga0137441_10075115	3300011425	Soil	MQLLADLERALAAEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPGPAG*
Ga0137456_10001462	3300011428	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPKPAG*
Ga0137464_10480263	3300011434	Soil	ERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPKPAG*
Ga0137452_10127316	3300011441	Soil	AQLLREDIARLRKLQAIAAEAADAAAFVAAGMRIGWTQGDTRTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPGPAG*
Ga0137437_10074493	3300011442	Soil	MQLLADLERALAAEESLFRAQLLREDLARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELREPLEKLLNEIYARESDARIGAAWHELHRVRMERLLGCLSTPTPKPAG*
Ga0137457_11383342	3300011443	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAVAAEAADAAAFVEAGMRIGWTQGDARTAELREPLERLLNEIYARVSDARISAAWYELHRVRMERLLGCLSTPTPGPAG*
Ga0137453_11050701	3300012034	Soil	MELIGRLETLVAKEESLFRAQLLREDIARLRKLQELAKSAPDAEAFRKAGMRIGWTQGDARTHELREPLVRLLDAVYASQEEEIFLAWEALHRARMERLVGCLSTPVPKPAG*
Ga0137445_10539872	3300012035	Soil	MQLLADLERALAAEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVAAGMRIGWTQGDTRTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPGPAG*
Ga0137445_10990642	3300012035	Soil	MRLIGELERRLAGEQSLFQAQLLREDIARLHKLLALARGAADADAFVKAGMRIGWTQGDARTAELREPLEAFLRAVHARDDDGIALGWDALHRVRMERLLGCLSTPVPRPAD*
Ga0137431_11064183	3300012038	Soil	VRLIADLENLLKEEQSLFRGQLLREDIARLRKLQELVKVAPDIAAFKKSGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPRPAG*
Ga0137421_10206791	3300012039	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAVAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPRPAG*
Ga0137461_11818902	3300012040	Soil	MQLLADLERALAAEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVAAGMRIGWTQGDTRTAELRGPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPKPAG*
Ga0137430_12194371	3300012041	Soil	MQLLADLERALAAEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPKPAG*
Ga0137355_10710252	3300012163	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVAAGMRIGWTQGDTRTAELRGPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPRPAG*
Ga0137350_10335953	3300012166	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELREPLERLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPGPAG*
Ga0137449_10078234	3300012227	Soil	MQLLADLERALAAEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELREPLERLLNEIYARVSDARISAAWYELHRVRMERLLGCLSTPTPGPAG*
Ga0137459_10070426	3300012228	Soil	MRLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPGPAG*
Ga0137465_10291264	3300012231	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVAAGMRIGWTQGDTRTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPTPRPAG*
Ga0075314_10532063	3300014265	Natural And Restored Wetlands	MRLIDDLTVWVAKEPSLFRAQLLREDIARLRRLQELAKSAPDAEAFRKAGMRIGWTQGDARTHELREPLVRLLDAVYASQEEEILLAWEALHRARMERLVGCLSTPVPKPAG*
Ga0180061_10493712	3300014861	Soil	LIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPKPAG*
Ga0180078_10588351	3300014865	Soil	MELIGRLETLVGKEESLFRAQLLREDIARLRKLQELAKSAPDAEAFKKAGMRIGWTQGDARTHELREPLVRLLDAVYASQEEEIFLAWEALHRARMERLVGCL
Ga0180087_10401592	3300014872	Soil	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWYELHRVRMERLLGCLSTPPPKPAG*
Ga0180089_10973182	3300015254	Soil	MRLLEVLKHLLAREQSMFQAQLLREDIARVRRLQELARSAPDTAAFMKSGMSLGWTQGDARTQELREPLEAFLQAVFSGDEGLIVQTWEALHRVRMERLVGCLSTPVPKPFD*
Ga0187775_1000051011	3300017939	Tropical Peatland	MRLLEDLERMVAQEQSLFRAQLLREDIARLRKLQELARTARDATAFKKTGTRIGWTQGDARTHELDEPLEQLLEAVYAFEQGKRDPQQQAHIVECWRELHRLRMERLLGCLATPVPKPSD
Ga0187786_105330861	3300017944	Tropical Peatland	MQIVEDLERALTQEESPFRAQLLREDIARLRKLEALARSAADVTAFKQAGMRIGWTQGDARTHELREPLERLLEAVYAGDEARSVQAWNELHRVRMERL
Ga0187766_100758474	3300018058	Tropical Peatland	MRLIGDLERALAGEESLFRAQLLREDLARLRKLQALAKSVPDREAFLKAGKRIGWTQGDARTHELGEALGALLEEILGYETGDRSAEREARISAAWQELHRTRMERLLGCLSTPVPKPAA
Ga0184615_106203281	3300018059	Groundwater Sediment	MRLLEVLEHLLAREQSMFQAQLLREDIARVRKLQELARSTSDAAAFMKSGMRLGWTQGDSRTQELREPLEAFLQAVFSGDDGLIVQTWEALHRVRMERLVGCLSTPVPKPFD
Ga0187765_1000092915	3300018060	Tropical Peatland	MKLIGDLERALAGEESLFRAQLLREDLARLRKLQALAKSVPDREAFLKAGARIGWTQGDARTHELGETLGALLEEIFGYETGDRSAEREARISAAWQELHRTRMERLLGCLSTPVPKPAA
Ga0184636_11613602	3300018068	Groundwater Sediment	MRLLEVLEHLLAREQSMFQAQLLREDIARVRKLQELARSTSDAAAFMKSGMRLGWTQGDSRTQELREPLEAFLQAVFSGDEGLIVQTWEALHRVRMERLVGCLSTPVPKPFD
Ga0184628_102101312	3300018083	Groundwater Sediment	MQLLADLERALAAEGSLFRAQLLREDLARLRRLQAIAAEAPDAAAFVAAGMRIGWTQGDARTAELREPLEKLLNEIYARESDARIGAAWHELHRVRMERLLGCLSTPTPKPAG
Ga0184629_100923313	3300018084	Groundwater Sediment	MRLLEVLEHLLAREQSMFQAQLLREDIARVRKLQELARSAPDTAAFMKSGMSLGWTQGDARTQELREPLEAFLQAVFSGDEGLIVQTWEALHRVRMERLVGCLSTPVPKPFD
Ga0187892_1000005917	3300019458	Bio-Ooze	MRLLDELERLAAAEQSLFRAQLLREDAARLRRLQEIARTAPDAAAFGRDGARIGWTQGDARTNELSGPLQRLLEEVYAFERGKRDAGQEARIVESWNELHRLRMERLVGCLSSPVPRPSG
Ga0210379_102031461	3300021081	Groundwater Sediment	GFVHGARLYNGCMQLLDDLERLLAREQSMFQAQLLREDIARVRKLQELARSAPDTAAFMKSGMSLGWTQGDARTQELREPLEAFLQAVFSGDEGLIVQTWEALHRVRMERLVGCLSTPVPKPFD
Ga0210379_104678821	3300021081	Groundwater Sediment	MRLLGDLEQLLAREQSMFQAQLLREDIARVRKLQELARSTSDAAGFVKSGMRLGWTQGDVRTQELREPLEAFLQAVFSGDEGLIVQTWEVLHRVRMERLVGCLSTPVPKPFD
Ga0210377_100634433	3300021090	Groundwater Sediment	MRLLEVLEHLLAREQSMFQAQLLREDIARVRKLQELARSTSDAAAFMKSGMRLGWTQGDSRTQELREPLEAFLQAVFSGDEDLIVQTWEVLHRVRMERLVGCLSTPVPKPFD
Ga0212128_100274124	3300022563	Thermal Springs	MQLIEDLAGWAAKETSLFRAQLLREDIARLRKLQELAKTAPDEPAFRKSGMRIGWTQGDARTHELAEPLACLLEAVYAFERNSAPEAPIAEAWEALHRARMERLVGCLSTPVPKPVD
Ga0212128_102262582	3300022563	Thermal Springs	MQLIGRLELLVGKEESPFRAQLLREDLARLRKLQELARTAPDEPAFKKSGMRIGWTQGDARTHELAEPLGRLLAAVYRFVREGAPEAPIAEAWEAVHRARMEKLVGCLSTPVPKPAD
Ga0209399_100200563	3300025157	Thermal Springs	MQLIEDLAGWAAKETSLFRAQLLREDIARLRKLQELAKTAPDEPAFRKSGMRIGWTQGDARTHELREPLACLLEAVYAFERNSAPEAPIAEAWEALHRARMERLVGCLSTPVPKPVD
Ga0209108_100940342	3300025165	Soil	MRLIGDLERRLDGEQSMFQAQLLREDIARLKKLGELARAVADEASFVAAGMRVGWTPDDARTAELREPLEAFLKAAFSNDDARIVRAWEELHRVRMERLLGCLSTPVPKPAD
Ga0209640_100045112	3300025324	Soil	MRLIGDLERRLDGEQSMFQAQLLREDIARLKKLGELARAVADEASFVAAGMRVGWTPDDARTAELREPLEAFLKAAFSNDDARIVRAWEELHRVRMERLLGCLSTPVPKPVD
Ga0210139_11284651	3300025558	Natural And Restored Wetlands	LADLERALGAEQSLFRAQLLREDIARLRKLEALTRSAADAEAFKKAGMRLGWTQGDARTAELREPLEALLEAILSGEEARITTAWNELHRARMERLLGCLSTPVPKPAG
Ga0210073_10141243	3300025569	Natural And Restored Wetlands	MQLLADLERALGAEQSLFRAQLLREDIARLRKLEALTRSAADAEAFKKAGMRLGWTQGDARTAELREPLEALLEAILSGEEARITTAWNELHRARMERLLGCLSTPVPKPAG
Ga0210071_10002173	3300025955	Natural And Restored Wetlands	MRLVAELERALETEESPFRAQLLKEDIARLRKLEALTRSAPDAEAFKKAGMRLGWTQGDARTAELREPLEALLEAILSGEEARITTAWNELHRARMERLLGCLSTPVPKPAG
Ga0210089_10042902	3300025957	Natural And Restored Wetlands	MRLVAELERALETEESPFRAQLLKEDIARLRKLEALTRSAPDAEAFRKAGMRLGWTQGDARTAELREPLEALLEAILSGEEARITTAWNELHRARMERLLGCLSTPVPKPAG
Ga0210090_10003134	3300025965	Natural And Restored Wetlands	MRLVAELERALETEESPFRAQLLKEDIARLRKLEALTRSAPDAEAFKKAGMRLGWTQGDARTAELREPLEALLEAILSGEEARITAAWNELHRARMERLLGCLSTPVPKPAG
Ga0209967_10533602	3300027364	Arabidopsis Thaliana Rhizosphere	VKLIEDLESLVAKEPSMFRAQLLREDVARLRKLQALATAAPDAAAFRKAGARIGWTQGDARTHELREPLERLLDAVFASQEEEILLAWEALHRARMERLVGCLSTPVPKPAG
Ga0209981_10420772	3300027378	Arabidopsis Thaliana Rhizosphere	MQLIARLEELLRSEQSLFRAQLLREDVARLRKLQALAESAPDLEAFKKAGMRIGWTQGDARTHELAEPLTRLLEAVYASREEELLPAWDALHRARMERLVGCLSTPVPKPVD
Ga0210000_10500412	3300027462	Arabidopsis Thaliana Rhizosphere	MQLLEKLSLLLSEETSLFRAQLLREDIARLQKLQQLARQAPDAEAFRKSGMRIGWTQGDARTHELREPLERLLDAVFASQEEEILLAWEALHRARMERLVGCLSTPVPKPAG
Ga0209995_10033792	3300027471	Arabidopsis Thaliana Rhizosphere	VKLIEDLESLIAKEPSMFRAQLLREDVARLRKLQALATAAPDAAAFRKAGARIGWTQGDARTHELAEPLERLLAAVYAFEKDSAPEAPITEAWEALHRARMERLVGCLSTPAPKPVD
Ga0209995_10411593	3300027471	Arabidopsis Thaliana Rhizosphere	MQLIARLEELLRSEQSLFRAQLLREDVARLRKLQALAESAPDLEAFKKAGMRIGWTQGDARTHELAEPLTRLLEAVYASREEELLPAWDALHRARMERLVGCL
Ga0209999_10598421	3300027543	Arabidopsis Thaliana Rhizosphere	SEETSLFRAQLLREDIARLQKLQQLARQAPDAEAFRKSGMRIGWTQGDARTHELREPLERLLDAVFASQEEEILLAWEALHRARMERLVGCLSTPVPKPAG
Ga0209819_100771262	3300027722	Freshwater Sediment	MELIERLEALVGKEESLFRAQLLREDIARLTRLQELARTAKDAEAFRKSGMRIGWTQGDARTHELREPLERLLAAVYAFEKDAAPEAPVVEAWEALHRSRMEKLVGCLSTPVPKPLD
Ga0209486_105513761	3300027886	Agricultural Soil	EDLESLIAKEPSMFRAQLLREDVARLRKLQALAATAPDAAAFRKAGARIGWTQGDARTHELGEPLERLLAAVYAFEKDSAPEAPIIAAWEALHRARMEKLVGCLSTPVPRPVD
Ga0247822_105719122	3300028592	Soil	MELIGRLEVLLESEASLFRAQLLREDIARLKKLEALANSAPDAEAFRKAGMRIGWTQGDARTHELREPLVRLLDAVYASREEEIAAAWEALHRARMEKLVGCLSTPVPKPLD
Ga0247822_107367471	3300028592	Soil	VAKEPSMFRAQLLREDVARLRKLQALAAAAPDAAAFRKAGARIGWTQGDARTHELGEPLERLLAAVYAFEKDSAPEAPIIEAWEALHRARMEKLVGCLSTPVPRPLD
Ga0247825_100008224	3300028812	Soil	VKLIEDLESLIAKEPSMFRAQLLREDVARLRKLQALAAAAPDAAAFRKAGARIGWTQGDARTHELGEPLERLLAAVYAFEKDSAPEAPIIEAWEALHRARMEKLVGCLSTPVPRPLD
Ga0299906_102198023	3300030606	Soil	MFRAQLLREDVARLRKLQALAAGTADAAAFRKAGARIGWTQGDARTHELGEPLERLLEAVYAFEREKRDAAQEALIAESWNALHRARMEKLVGCLSTPVPRPVD
Ga0302046_107308502	3300030620	Soil	MFRAQLLREDVARLRKLQALAAGTADAAAFRKAGARIGWTQGDARTHELGEPLERLLEAVYAFEREKRDAAQEALIAESWNALHRARMEKLVGCLSTPVPKPVD
Ga0299913_101737875	3300031229	Soil	VKLIEDLESLVAKEPSMFRAQLLREDVARLRKLQALAAGTADAAAFRKAGARIGWTQGDARTHELGEPLERLLAAVYAFEKHSAPEAPIIEAWEALHRARMEKLVGCLSTPVPRPAD
Ga0307408_1018023882	3300031548	Rhizosphere	VKLIEDLESLIAKEPSMFRAQLLREDVARLRKLQALASAAPDAAAFRKAGARIGWTQGDARTHELGEPLERLLAAVYAFEKDSAPQAPIIEAWEALHRARMEKLVGCLSTPVPRPLD
Ga0307408_1025133171	3300031548	Rhizosphere	MQLLEKLSAVLAVESSLFQAQLLREDIARLRKLQELAKSAPDAEAFKKAGMRIGWTQGDARTHELREPLERLLDAVYVSQEEEILLAWEALHRARMERLVGCLSTPVPKPAG
Ga0310813_108884792	3300031716	Soil	MQLLHELERLAAAEESLFRRQLFSEDIARLRKLDALRGASDLNSFKKAGMRLGWTQGDARTAEIRPQVEALLEAVFARDEGRIASAWHELHRARMERLLGCLSTPAPKPVA
Ga0307407_117203122	3300031903	Rhizosphere	SWLAKEPSLFRAQLLREDITRLRKLQELASSAPDAEAFKKAGVRIGWTQGDARTHELREPLLRLLDAVYASQEEEILLAWEALHRARMERLVGCLSTPVPKPAG
Ga0326597_101607423	3300031965	Soil	MRLIEDLERRLAGEQSLFQAQLLREDIARLKKLLDLARTAADEGAFVKSGMRIGWTQGDARTVELREPLEAFLQAVHAGDEARIAQAWETLHRVRLERLLGCLSTPVPRPAD
Ga0307409_1019933411	3300031995	Rhizosphere	MRRLYNLRMQLIHDLERLLAAEESLFRQQLLREDIARLRRLEALAGSAPDLPAFVQAAMRLGWTQGDARTAEIVPQVQSLVEAVYRRDEARIAEAWNELHRARMERLLGCLATPVPKPVE
Ga0307409_1020268632	3300031995	Rhizosphere	MQLIARLEELLRSEQSLFRAQLLREDLARLRKLQALAKSAPDLEAFKKAGMRIGWTQGDARTHELAEPLARLLEAVYASREEELFAAWEALLRARMDRLVGCLSTPVPKPAD
Ga0315910_105118552	3300032144	Soil	MRLIAHLELLAGREESPFRAQLLREDVARLRRLQELTRTAPDAEAFMKAGMRIGWTQGDARTHELREPLERLLAAVHASQEQEIFQAWEALHRARMERLVGCLSTPVPKPVD
Ga0315912_100439885	3300032157	Soil	MRLSAHLELLAGREESPFRAQLLREDVARLRRLQELTRTAPDAEAFMKAGMRIGWTQGDARTHELREPLERLLAAVHASQEQEIFQAWEALHRARMERLVGCLSTPVPKPVD
Ga0315912_100472355	3300032157	Soil	MQLMADLELALAAEESLFRAQLLREDIARLRKLQAIAAGAPDAAAFVAAGMRIGWTQGDARTAELREPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPKPAG
Ga0335085_101525712	3300032770	Soil	MRLLEELARLAAQESSLFQAQLLKEDIARLGKLAALAQSAPDLAAFRQAGMRLGWTQGDARTHELREPLEELLEAIYRKDEARITPAWNALHRARMERLVGCLSTPTPKPVD
Ga0335085_106616323	3300032770	Soil	MQLMADLERALAVEESLFRAQLLREDLARLRKLQALAAEAADATAFVNAGMRIGWTAGDARTLELREPLEKLLNEIYARGSDARISAAWHELHRVRMERLLGCLSTPAPRPDG
Ga0335084_100831347	3300033004	Soil	MRLLEELARLAAQESSLFQAQLLKEDIARLGKLAALAQSAPDLAAFRQAGMRLGWTQGDARTHELREPLEELLEAIYRKDEARITPAWNALHRARMERLVGCLSTPAPKPAD
Ga0214471_1000063526	3300033417	Soil	MQLIEDLEGRLAREQSMFQAQLLREDIARLRKLVELAGSTQVTGEFVKSGMRIGWTQGDARTEELSEPLEAFLRAVYAADEALILRTWETLHRVRMERLLGCLSTPAPKPGA
Ga0316628_1011074972	3300033513	Soil	MRGLYNLRMPLIADLERALASEESLFRRQLLREDIARLRRLAELRQSSPDLEAFKKAGMRLGWTQGDARTAELREPLEQFLAEIYALGKGGEDSRVTRAWNELHRVRMERLLGCLATPVPKPAE
Ga0247830_1000064213	3300033551	Soil	MFRAQLLREDVARLRKLQALAAAAPDAAAFRKAGARIGWTQGDARTHELGEPLERLLAAVYAFEKDSAPEAPIIEAWEALHRARMEKLVGCLSTPVPRPLD
Ga0247830_104659803	3300033551	Soil	VKLIEDLESLVAKEPSMFRAQLLREDVARLRKLQALATAVPDAAAFRKAGARIGWTQGDARTHELAEPLERLLAAVYAFEKDSAPEAPITEAWEALHRARMERLVGCLSTPAPKPVD
Ga0364925_0037316_1282_1614	3300034147	Sediment	MGLIEDLERALAGEESLFRAQLLREDIARLRKLQAIAAEAADAAAFVEAGMRIGWTQGDARTAELRGPLEKLLNEIYARESDARISAAWHELHRVRMERLLGCLSTPTPKP
Ga0364932_0111180_3_302	3300034177	Sediment	MQLLDDLEHLLAREQSMFQAQLLREDIARVRKLQELARSTLDAAAFVKSGMRLGWTQGDSRMQELREPLEAFLQAVFSGDEGLIVQTWEALHRVRMERLV
Ga0373917_0046369_134_487	3300034692	Sediment Slurry	MKLIAALEALIQKEQSLFRAQLLREDVARLRKLQELARTAKDAEAFRKSGMRIGWTQGDARTHELREPLERLLAAVYALEKDAGPEAPIVEAWEALHRSRMEKLVGCLSIPVPKPVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085261

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences