Metagenome Family F085248

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085248
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	73 residues
Representative Sequence	GTYALLASAYALAGQVDKSRLALAQYQKYYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Number of Associated Samples	68
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.31 %
% of genes near scaffold ends (potentially truncated)	90.99 %
% of genes from short scaffolds (< 2000 bps)	93.69 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.441 % of family members)
Environment Ontology (ENVO)	Unclassified (68.468 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.658 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.79% β-sheet: 0.00% Coil/Unstructured: 35.21%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13181	TPR_8	5.41
PF12833	HTH_18	4.50
PF13432	TPR_16	1.80
PF09423	PhoD	1.80
PF00211	Guanylate_cyc	1.80
PF13414	TPR_11	1.80
PF11306	DUF3108	1.80
PF01047	MarR	1.80
PF09339	HTH_IclR	0.90
PF00753	Lactamase_B	0.90
PF13424	TPR_12	0.90
PF07719	TPR_2	0.90
PF13428	TPR_14	0.90
PF00589	Phage_integrase	0.90
PF01740	STAS	0.90
PF00271	Helicase_C	0.90
PF04542	Sigma70_r2	0.90
PF08281	Sigma70_r4_2	0.90
PF13410	GST_C_2	0.90
PF00994	MoCF_biosynth	0.90
PF00072	Response_reg	0.90
PF03401	TctC	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.80
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.90
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.90
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.90
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.90
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.26 %
Unclassified	root	N/A	38.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.26 %
Unclassified	root	N/A	38.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.26 %
Unclassified	root	N/A	38.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.35 %
Unclassified	root	N/A	38.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.64 %
Unclassified	root	N/A	38.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.74 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	17.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.41 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	11.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.41 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.50 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1.80 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	11.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.50 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.80 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	11.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.50 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	1.80 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.74 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	11.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.50 %
Klebsiella aerogenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	1.80 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_101425299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1205	Open in IMG/M
3300005332\|Ga0066388_101639504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300005332\|Ga0066388_104506042	Not Available	709	Open in IMG/M
3300005332\|Ga0066388_108519575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	510	Open in IMG/M
3300005713\|Ga0066905_100421114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1089	Open in IMG/M
3300005713\|Ga0066905_100541820	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005713\|Ga0066905_101335054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300005713\|Ga0066905_101909952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	549	Open in IMG/M
3300005713\|Ga0066905_102294071	Not Available	504	Open in IMG/M
3300005764\|Ga0066903_102571379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300005764\|Ga0066903_103487781	Not Available	848	Open in IMG/M
3300005764\|Ga0066903_103624109	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005764\|Ga0066903_106360210	Not Available	616	Open in IMG/M
3300005764\|Ga0066903_106634309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	602	Open in IMG/M
3300005764\|Ga0066903_107848703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	548	Open in IMG/M
3300005764\|Ga0066903_107923380	Not Available	545	Open in IMG/M
3300005764\|Ga0066903_107975223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	543	Open in IMG/M
3300006904\|Ga0075424_100943117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	920	Open in IMG/M
3300009012\|Ga0066710_101169175	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300010046\|Ga0126384_10063437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2598	Open in IMG/M
3300010046\|Ga0126384_11007446	Not Available	759	Open in IMG/M
3300010047\|Ga0126382_11149760	Not Available	692	Open in IMG/M
3300010048\|Ga0126373_11475711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300010360\|Ga0126372_11330640	Not Available	748	Open in IMG/M
3300010361\|Ga0126378_10741246	Not Available	1093	Open in IMG/M
3300010373\|Ga0134128_12905479	Not Available	527	Open in IMG/M
3300010398\|Ga0126383_10568057	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300010398\|Ga0126383_10916668	Not Available	963	Open in IMG/M
3300010398\|Ga0126383_12680516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	581	Open in IMG/M
3300012948\|Ga0126375_11702400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300012958\|Ga0164299_11466448	Not Available	531	Open in IMG/M
3300012960\|Ga0164301_11875659	Not Available	506	Open in IMG/M
3300012971\|Ga0126369_12238400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	633	Open in IMG/M
3300016270\|Ga0182036_10814206	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300016270\|Ga0182036_11519554	Not Available	562	Open in IMG/M
3300016294\|Ga0182041_11080316	Not Available	728	Open in IMG/M
3300016319\|Ga0182033_10496315	All Organisms → cellular organisms → Bacteria → Proteobacteria	1048	Open in IMG/M
3300016319\|Ga0182033_10874810	Not Available	795	Open in IMG/M
3300016341\|Ga0182035_10723101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	869	Open in IMG/M
3300016357\|Ga0182032_10412658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300016357\|Ga0182032_10579510	All Organisms → cellular organisms → Bacteria → Proteobacteria	931	Open in IMG/M
3300016371\|Ga0182034_10110378	Not Available	1993	Open in IMG/M
3300016371\|Ga0182034_10634010	Not Available	904	Open in IMG/M
3300016371\|Ga0182034_11415431	Not Available	608	Open in IMG/M
3300016371\|Ga0182034_11466266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	597	Open in IMG/M
3300016387\|Ga0182040_10688703	Not Available	835	Open in IMG/M
3300016404\|Ga0182037_11450057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	608	Open in IMG/M
3300016422\|Ga0182039_10406614	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300016422\|Ga0182039_11457484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300016445\|Ga0182038_10506026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300016445\|Ga0182038_10602833	All Organisms → cellular organisms → Bacteria → Proteobacteria	948	Open in IMG/M
3300016445\|Ga0182038_11765828	Not Available	558	Open in IMG/M
3300021560\|Ga0126371_13275215	Not Available	547	Open in IMG/M
3300021560\|Ga0126371_13848661	Not Available	506	Open in IMG/M
3300031543\|Ga0318516_10054295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2187	Open in IMG/M
3300031561\|Ga0318528_10235955	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300031561\|Ga0318528_10575903	Not Available	604	Open in IMG/M
3300031640\|Ga0318555_10211777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1045	Open in IMG/M
3300031668\|Ga0318542_10418092	Not Available	693	Open in IMG/M
3300031719\|Ga0306917_10035973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3230	Open in IMG/M
3300031724\|Ga0318500_10003429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4796	Open in IMG/M
3300031744\|Ga0306918_10311295	Not Available	1215	Open in IMG/M
3300031747\|Ga0318502_10389115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	828	Open in IMG/M
3300031748\|Ga0318492_10674799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	553	Open in IMG/M
3300031768\|Ga0318509_10387111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300031771\|Ga0318546_10216493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1312	Open in IMG/M
3300031771\|Ga0318546_10596096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300031771\|Ga0318546_10731049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	696	Open in IMG/M
3300031780\|Ga0318508_1054778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1060	Open in IMG/M
3300031781\|Ga0318547_10743598	Not Available	610	Open in IMG/M
3300031795\|Ga0318557_10306762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300031797\|Ga0318550_10655604	Not Available	503	Open in IMG/M
3300031798\|Ga0318523_10492554	Not Available	607	Open in IMG/M
3300031833\|Ga0310917_10735442	Not Available	667	Open in IMG/M
3300031833\|Ga0310917_10802177	Not Available	636	Open in IMG/M
3300031845\|Ga0318511_10358255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella aerogenes	665	Open in IMG/M
3300031846\|Ga0318512_10347733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	741	Open in IMG/M
3300031879\|Ga0306919_10771739	Not Available	739	Open in IMG/M
3300031890\|Ga0306925_10144683	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300031890\|Ga0306925_11281071	Not Available	729	Open in IMG/M
3300031894\|Ga0318522_10228454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	705	Open in IMG/M
3300031897\|Ga0318520_10634315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300031897\|Ga0318520_11038003	Not Available	518	Open in IMG/M
3300031912\|Ga0306921_12642875	Not Available	517	Open in IMG/M
3300031941\|Ga0310912_10092873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2209	Open in IMG/M
3300031941\|Ga0310912_10280060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1289	Open in IMG/M
3300031941\|Ga0310912_10509779	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300031941\|Ga0310912_10803578	Not Available	726	Open in IMG/M
3300031945\|Ga0310913_10286538	Not Available	1160	Open in IMG/M
3300031946\|Ga0310910_10157312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1742	Open in IMG/M
3300031947\|Ga0310909_10404567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1146	Open in IMG/M
3300031954\|Ga0306926_10773152	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300032010\|Ga0318569_10548085	Not Available	539	Open in IMG/M
3300032035\|Ga0310911_10095754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1621	Open in IMG/M
3300032039\|Ga0318559_10208105	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300032042\|Ga0318545_10121463	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300032042\|Ga0318545_10299220	Not Available	578	Open in IMG/M
3300032042\|Ga0318545_10383549	Not Available	507	Open in IMG/M
3300032059\|Ga0318533_10492286	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300032059\|Ga0318533_11215022	Not Available	551	Open in IMG/M
3300032066\|Ga0318514_10655385	Not Available	559	Open in IMG/M
3300032068\|Ga0318553_10091178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1545	Open in IMG/M
3300032076\|Ga0306924_10528097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300032076\|Ga0306924_11855159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	626	Open in IMG/M
3300032089\|Ga0318525_10175723	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300032261\|Ga0306920_100163175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3321	Open in IMG/M
3300032261\|Ga0306920_101661263	All Organisms → cellular organisms → Bacteria → Proteobacteria	906	Open in IMG/M
3300033289\|Ga0310914_10426574	All Organisms → cellular organisms → Bacteria → Proteobacteria	1200	Open in IMG/M
3300033289\|Ga0310914_10641693	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300033289\|Ga0310914_11224728	Not Available	652	Open in IMG/M
3300033290\|Ga0318519_10739262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.10%
Plants	Host-Associated → Plants	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.78%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1014252993	3300005332	Tropical Forest Soil	VRSLHAALDSNPNTVGTYALLASAHALAGQVDKSRLALAQYQKYYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG*
Ga0066388_1016395041	3300005332	Tropical Forest Soil	AYALAGHADKSRLALAQYQKHYPDVTVGSFRSLAPVPLKLATEKYRQQFERLKDGLRKAGMPG*
Ga0066388_1045060422	3300005332	Tropical Forest Soil	VRSLRTALDSNPNTVGTYALLASAYALAGHADKSRLALAQYRKYNPDVTVGSFRSLAPVPLNLTTWKYRQQFERLKGGLRKAGMPG*
Ga0066388_1085195751	3300005332	Tropical Forest Soil	VGTYALLASAYALAGHADKSRLALAEYQKYYPDVTVGSFRSLAPVPLKLTAEKYRRQFERLKEGLRKAGMPV*
Ga0066905_1004211141	3300005713	Tropical Forest Soil	ALAGLADKSRLALGQYQKYYPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG*
Ga0066905_1005418202	3300005713	Tropical Forest Soil	LDSNPNNVGTYALLASAYALGGLADKSRLALAEYQKYHPHVTVGSFRLVSPVPLKLTSQKYQQQFRRLKEGLRKAGMPG*
Ga0066905_1013350542	3300005713	Tropical Forest Soil	ALLASAYALAGLADKSRLALAQYQKYHPKVTAESFRSLSPVPLNLTNQKYQQRFERLKEGLRRAGMPG*
Ga0066905_1019099521	3300005713	Tropical Forest Soil	EAAQSLRAALDSNPNDVGAYALLASAYALGGLEDKSRLALAEYQKYHPDVTVESFRLLFPVPLKLTSQKYQQQFKRLKEGLRKAGMSE*
Ga0066905_1022940712	3300005713	Tropical Forest Soil	EAAQSLRAALDSNPNDVGAYALLASAYALGGLEDKSRLALAEYQKYHPDVTVESFRLLSPVPLKLTSQKYQQQFKRLKEGLRKAGMSE*
Ga0066903_1025713791	3300005764	Tropical Forest Soil	NTVGTYALLASAYALAGHADKSRLALAQYQKHYPDVTVGNFRSLAPVPLKLTTEKYRQQFERLKDGLRKAGMAG*
Ga0066903_1034877811	3300005764	Tropical Forest Soil	YALLASAYALAGFPDKSYLPLLQYRKYQPNVTVGSFRSLSPVPLKLTSQKYRQQFERLKEGLRKAGMPG*
Ga0066903_1036241091	3300005764	Tropical Forest Soil	GTYALLASAYALAGLADKSRAALAQYQKYHPDVTVGSFRSVAPVPLNLTTEKYRQQFERLKGGLRKAGMPG*
Ga0066903_1063602101	3300005764	Tropical Forest Soil	GTYALLASAYALAGLADKSRAALAQYQKYHPDVTVGSFRSLAPVPLNLTTQKYRQQFERLKGGLRKAGMPG*
Ga0066903_1066343092	3300005764	Tropical Forest Soil	ALLASAYALAGQVDKSRLALAQYQRYYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG*
Ga0066903_1078487031	3300005764	Tropical Forest Soil	ALDSNPNTVGTYALLASAYALAGHVDKSRLALAQYQKYYPDVTVGSFRSLSPVPLNLTSPKYRQQFERLKEGLRKAGMPG*
Ga0066903_1079233802	3300005764	Tropical Forest Soil	ALAGLADKSRAALAQYQKYHPDVTVGSFRSVAPVPLNLTTEKYRQQFERLKGGLRKAGMPG*
Ga0066903_1079752231	3300005764	Tropical Forest Soil	SAYALGGLTDKSRLALAEYQKYHPDVTVGSFRLLSPVPLKLTSQKYQQQFRRLKEGLRKAGMPE*
Ga0075424_1009431173	3300006904	Populus Rhizosphere	RFLRTALDSNPNTVGTYALLASAYALAGHADKSRLALAQYQKYNPDVTVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG*
Ga0066710_1011691753	3300009012	Grasslands Soil	VGTYALLASAYALAGHADKSRLALAQYQKYNPNVTVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG
Ga0126384_100634373	3300010046	Tropical Forest Soil	VRSLRAALDSNPNTVGSYALLASAYALAGLGDKSRAALAQYQKYQPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG*
Ga0126384_110074463	3300010046	Tropical Forest Soil	NPNSVGAYALLASAYALGGFADKSRLALAEYQKYHPDVTVGSFRLLSPVPLKLTSQKYQQQFKRLKEGLRKAGMPG*
Ga0126382_111497601	3300010047	Tropical Forest Soil	ALLASAYALAGLADKSRLALAQYQKYHPEVTVGSFRSLSPVPLNLTNQKYQQQFERLKGGLRKAGMPG*
Ga0126373_114757112	3300010048	Tropical Forest Soil	LRAALDSNPNDVGAYGLLASAYALGGLEDKSRLALAEYQKYHPDVTVGSFRLLSPVPLKLTSQKYQQQFKRLKEGLRKAGMPG*
Ga0126372_113306401	3300010360	Tropical Forest Soil	AYALAGHADKSRLALAQYQKHHPEVTVGSFRNLSPVPLNLTNQKYQQQFERLKEGLRRAGMPG*
Ga0126378_107412464	3300010361	Tropical Forest Soil	LLASAYALAGLADKSRLALGQYQKYYPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG*
Ga0134128_129054792	3300010373	Terrestrial Soil	LLASAYALAGHADKSRLALAQYQKYNPNVTVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG*
Ga0126383_105680573	3300010398	Tropical Forest Soil	RAALDSNPNTVGTYALLASAYALPGHADKSRLALAEYQKYYPDVTVGSFRSLAPVPLKLTAEKYRRQFERLKDGLRKAGMPG*
Ga0126383_109166682	3300010398	Tropical Forest Soil	AYALAGHADKSRLALAQYRKYNPDVTVGSFRSLAPVPLNLTTWKYRQQFERLKGGLRKAGMPG*
Ga0126383_126805161	3300010398	Tropical Forest Soil	ALDSNPNNVGTYALLASAYALGGLTDKSRLALAEYQKYHPDVAVGSFRLLSPVPLKLTSQKYQQQFRRLKEGLRKAGMPE*
Ga0126375_117024001	3300012948	Tropical Forest Soil	GQIDKSRLALAQYQQYYPDVTVGSLRSLAPVPLRLTTEKYRQQFERLKDGLRKAGMPG*
Ga0164299_114664481	3300012958	Soil	ALLASAYALAGHADKSRSALAQYQKYNPDVTVGSFRSLAPVPLNLTTQKYRQQFERLKEGLRKAGMPG*
Ga0164301_118756591	3300012960	Soil	VGTYALLASAYALAGHADKSRSALAQYQKYNPDVTVGSFRSLAPVPLNLTTRKYRQQFERLKEGVRKAGMPG*
Ga0126369_122384001	3300012971	Tropical Forest Soil	TVGTYALLASAYALAGLADKSRLALGQYQKYYPDVTVVSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG*
Ga0182036_108142061	3300016270	Soil	NTVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0182036_115195541	3300016270	Soil	LDSNPNTVGTYALLASAYALAGHVDKSRLALAQYQKYYPDVTVDSFRSLAPVSLKLTTEKYRRQFERLKDGLRKAGMPG
Ga0182041_110803161	3300016294	Soil	DSNPNTVGTYALLASAYALAGHADKSRLALAQYQKHYPDLTVGSFRSLAPVPLKLTTEKYRQQFERLKDGLRKAGMPG
Ga0182033_104963151	3300016319	Soil	TYALLASAYALAGHVDKSRLALAQYQKYYPDVTVDSFRSLAPVSLKLTTEKYRRQFERLKDGLRKAGMPG
Ga0182033_108748101	3300016319	Soil	NPTTVGTYALLASAYALAGLADKSRLALGQYQKYYPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG
Ga0182035_107231011	3300016341	Soil	SAYALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLKLTSQKYRRQFERLKEGLRKAGMPG
Ga0182032_104126583	3300016357	Soil	GTYALLASAYALAGHADKSRLALAQYQKHYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKDGLRKAGMLG
Ga0182032_105795103	3300016357	Soil	TVGTYALLASAYALAGHADKSRLALAQFQKYNPDVTVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG
Ga0182034_101103786	3300016371	Soil	AYALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLNLTSQKYRRQFERLKEGVALAWLR
Ga0182034_106340102	3300016371	Soil	ALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLKLTSQKYRRQFERLKEGLRKAGMP
Ga0182034_114154311	3300016371	Soil	ALDSNPNTVGTYALLASAYALAGHADKSRLALAQYQKYNPDVTVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG
Ga0182034_114662661	3300016371	Soil	NTVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVTVGSFRSLAPVPLNLTSEKYRQQFERLKDGLRKAGMPG
Ga0182040_106887031	3300016387	Soil	NPNTVGTYALLASAYALAGHADKSRLALAQFQKYNPDVTVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG
Ga0182037_114500571	3300016404	Soil	ALDSNPNNVGTYALLASAYALGGLTDKSRLALAEYQKYHPDVTVGSFRLVSPVPLKLTSQKYQQQFERLKDGLRKAGMPG
Ga0182039_104066141	3300016422	Soil	ALLASAYALGGLADKSRLALAEYQKYHPDVTVGSFRLLSPVPLKLTSQKYQQQFRRLKEGLRKAGMPG
Ga0182039_114574843	3300016422	Soil	AYALAGLGDKSRAALAQYQEYQPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG
Ga0182038_105060262	3300016445	Soil	MVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVAVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGM
Ga0182038_106028331	3300016445	Soil	VRSLRTALDSNPNTVGTYALLASAYALAGHADKSRLALAQYRKYNPDVMVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG
Ga0182038_117658282	3300016445	Soil	RSLRAALDSNPNTVGTYALLASAYALAGLADKSRAALAQYQKYHPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG
Ga0126371_132752151	3300021560	Tropical Forest Soil	ALLASAYALGGLEDKSRLALAEYQKYHPDVTVESFRLLSPVPLKLTSQKYQQQFNRLKEGLRKAGMSE
Ga0126371_138486611	3300021560	Tropical Forest Soil	AFLASAYALAGHADKSHVALAQYQKYHPDVTVGSFRSLAPVPLNLTSQKYRQQFERVKDGLRKAGMPG
Ga0318516_100542951	3300031543	Soil	VRSLRAALDSNPNMVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVAVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0318528_102359551	3300031561	Soil	LDSNPITVGTYALLASAYALAGLADKSRSALAQYQKYYPDITVGSFRSLSPVPLKLTTEKYQQQFERLKEGLRKAGMPG
Ga0318528_105759031	3300031561	Soil	GHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLKLTSQKYRRQFERLKEGLRKAGMPG
Ga0318555_102117774	3300031640	Soil	ALGGLTDKSRLALAEYQKYHPDVTVGSFRLVSPVPLKLTSQKYQQQFERLKDGLRKAGMP
Ga0318542_104180921	3300031668	Soil	SLRAALDSNPNTVGSYALLASAYALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLKLTSQKYRRQFERLKEGLRKAGMPG
Ga0306917_100359731	3300031719	Soil	VAYALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLNLTSQKYRRQFERLKEGVALAWLR
Ga0318500_100034292	3300031724	Soil	MVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVAVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0306918_103112951	3300031744	Soil	LAGHADKSRLALAQYQKHYPDVTVGSFRSLAPVPLKLTNEKYRQQFERLKDGLRKAGMPG
Ga0318502_103891152	3300031747	Soil	LRAALDSNPNMVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVAVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0318492_106747992	3300031748	Soil	TYALLASAYALGGLADKSRLALAEYQKYHPDVTVGSFRLVSPVPLKLTSQKYQQQFERLKDGLRKAGMPG
Ga0318509_103871111	3300031768	Soil	LRAALDSNPNNVGTYALLASAYALGGLADKSRLALAEYQKYHPDVTVGSFRLVSPVPLKLTSQKYQQQFRRLKEGLRKAGMPG
Ga0318546_102164931	3300031771	Soil	RAALDSNPNTVGTYALLASAYALAGLADKSRLALVQYQRHYPDVTVSSFRSLSPVPLKLTNQKYQQQFKRLKQGLRKAGMPG
Ga0318546_105960962	3300031771	Soil	VAYALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLNLTSQKYRRQFERLKEGVA
Ga0318546_107310491	3300031771	Soil	PNTVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVTVGSFRSLAPVPLNLTSEKYRQQFERLKDGLRKAGMPG
Ga0318508_10547782	3300031780	Soil	VRSLHASLDSNPNTVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVAVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0318547_107435981	3300031781	Soil	SLRASLDSNPNTVGSYALLASAYALAGLGDKSRAALAQYQEYQPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG
Ga0318557_103067622	3300031795	Soil	MRSLRAALDSNPNTVGTYALLASAYALAGHADKSRLALAQYQKHYPDVTVGSFRSLAPVPLKLTNEKYRQQFERLKDGLRKAGMPG
Ga0318550_106556041	3300031797	Soil	ALLASAYALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLKLTSQKYRRQFERLKEGLRKAGMPG
Ga0318523_104925541	3300031798	Soil	LLASAYALAGLADKSRAALAQYQKYHPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG
Ga0310917_107354421	3300031833	Soil	SYALLASAYALAGLGDKSRAALAQYQEYQPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG
Ga0310917_108021773	3300031833	Soil	SNPNNVGTYALLASAYALAGFADKSHLALAQYQKYYPDVAVGSFRSLSPVPLNLTSPKYRQQFEGLKEGLRKAGMPG
Ga0318511_103582553	3300031845	Soil	AALDSNPNNVGTYALLASAYALGGLTDKSRLALAEYQKYHPDVTVGSFRLVSPVPLKLTSQKYQQQFRRLKEGLRKAGMPG
Ga0318512_103477331	3300031846	Soil	SNPSTVGTYALLASAYALAGLADKSRLALAQYQKYNPDVMVGSFRSLVPVPLNLTSQKYRQQFERVKEGLRKAGMPG
Ga0306919_107717392	3300031879	Soil	ASAYALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLKLTSQKYRRQFERLKEGLRKAGMPG
Ga0306925_101446833	3300031890	Soil	LDSNPNTVGSYALLASAYALAGLGDKSRAALAQYQEYQPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG
Ga0306925_112810713	3300031890	Soil	MRSLRAALDSNPNTVGTYALLASAYALAGHAGKSRLALVQYQKHYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKDGLRKAGMPG
Ga0318522_102284543	3300031894	Soil	GLADKSRLALAQYQKYNPDVMVGSFRSLVPVPLNLTSQKYRQQFERVKEGLRKAGMPG
Ga0318520_106343152	3300031897	Soil	LASAYALAGLADKSRSALAQYQKYYPDITVGSFRSLSPVPLKLTTEKYQQQFERLKEGLRKAGMPG
Ga0318520_110380033	3300031897	Soil	TYALLASAYALAGHAGKSRLALVQYQKHYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKDGLRKAGMPG
Ga0306921_126428751	3300031912	Soil	GHVDKSRLALAQYQKYYPDVTVDSFRSLAPVSLKLTTEKYRRQFERLKDGLRKAGMPG
Ga0310912_100928731	3300031941	Soil	SLRAALDSNPNTVGTYALRASAYALAGQVDKSRLALAQYQKYYPDVTVGSFRSLAPVPLNLTSEKYRQQFERLKDGLRKAGMPG
Ga0310912_102800601	3300031941	Soil	VAYALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLKLTSQKYRRQFERLKEGLRKAGMPG
Ga0310912_105097791	3300031941	Soil	TALDSNPNTVGTYALLASAYALAGHADKSRLALAQYQKYNPDVTVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG
Ga0310912_108035782	3300031941	Soil	VDKSRLALAEYQRYYPDVTVGSFRSLAPVPLNLTSQKYRRQFERLKEGVALAWLR
Ga0310913_102865382	3300031945	Soil	VRSLRASLDSNPNTVGSYALLASAYALAGLGDKSRAALAQYQEYQPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG
Ga0310910_101573126	3300031946	Soil	SLRAALDSNPNNVGTYALLASAYALGGLADKSRLALAEYQKYHPDVTVGSFRLVSPVPLKLTSQKYQQQFERLKDGLRKAGMPG
Ga0310909_104045672	3300031947	Soil	GTYALLASAYALAGLADKSRAALAQYQKYHPDVTVGSFRSLAPVPLNLTTEKYRQQFERLKDGLRKAGMPG
Ga0306926_107731522	3300031954	Soil	LDSNPNNVGTYALLASAYALGGLADKSRLALAEYQKYHPDVTVGSFRLLSPVPLKLTSQKYQQQFRRLKEGLRKAGMPG
Ga0318569_105480851	3300032010	Soil	LLASAYALAGHVDKSRLALAQYQKYYPDVTVDSFRSLAPVSLKLTTEKYRRQFERLKDGLRKAGMPG
Ga0310911_100957541	3300032035	Soil	AYALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLKLTSQKYRRQFERLKEGLRKAGMPG
Ga0318559_102081053	3300032039	Soil	VGTYALLASAYALAGHADKSRLALAQYRKYNPDVMVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG
Ga0318545_101214631	3300032042	Soil	AFDSNPNMVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVAVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0318545_102992201	3300032042	Soil	ASAYALAGHAGKSRLALVQYQKHYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKDGLRKAGMPG
Ga0318545_103835491	3300032042	Soil	ARSLRAALDSNPNNVGAYALLASAYALGGLADKSRLALAEYQKYHPDVTVGSFRLVSPVPLKLTSQKYQQQFRRLKEGLRKAGMPG
Ga0318533_104922861	3300032059	Soil	VGTYALLASAYALAGQVDKSRLALAQYQKYYPDVAVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0318533_112150222	3300032059	Soil	DSNPNTVGTYALLASAYALAGHADKSRLALAEYQKYYPDVTVGSFRSLAPVPLKLTAEKYRRQFERLKEGLRKAGMPV
Ga0318514_106553852	3300032066	Soil	SNPNTDGTYALLASAYALAGHADKSRLALAQYQKHYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKDGLRKAGMPG
Ga0318553_100911783	3300032068	Soil	GQVDKSRLALAQYQKYYPDVAVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0306924_105280973	3300032076	Soil	ALAGHVDKSRLALAEYQRYYPDVTVGSFRSLAPVPLNLTSQKYRRQFERLKEGVALAWLR
Ga0306924_118551591	3300032076	Soil	ASAYALAGQVDKSRLALAQYQKYYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0318525_101757231	3300032089	Soil	SNPNMVGTYALLASAYALAGQVDKSRLALAQYQKYYPDVAVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG
Ga0306920_1001631751	3300032261	Soil	GHAGKSRLALVQYQKHYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKDGLRKAGMPG
Ga0306920_1016612631	3300032261	Soil	ALDSNPNTVGTYALLASAYALAGHADKSRLALAQYRKYNPDVTVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG
Ga0310914_104265743	3300033289	Soil	YALAGLADKSRLALAEYQKYYPDVTVGSFRSLAPVPLKLTAEKYRRQFERLKDGLRKAGMPG
Ga0310914_106416933	3300033289	Soil	AVRSLRTALDSNPNTVGTYALLASAYALAGHADKSRLALAQYRKYNPDVMVGSFRSLAPVPLNLTTRKYRQQFERLKEGLRKAGMPG
Ga0310914_112247282	3300033289	Soil	AALDSNPNTVGTYALLASAYALAGHADKSRLALAQYQKHYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKDGLRKAGMPG
Ga0318519_107392621	3300033290	Soil	GTYALLASAYALAGQVDKSRLALAQYQKYYPDVTVGSFRSLAPVPLKLTTEKYRQQFERLKEGLRKAGMPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085248

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences