Metagenome / Metatranscriptome Family F085247

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085247
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	46 residues
Representative Sequence	VIALEVADLVLIASRTLGLDTGQVLDLLDPAAAEHALAQARPGSE
Number of Associated Samples	101
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.09 %
% of genes near scaffold ends (potentially truncated)	99.10 %
% of genes from short scaffolds (< 2000 bps)	92.79 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.072 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.838 % of family members)
Environment Ontology (ENVO)	Unclassified (41.441 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (43.243 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.10% β-sheet: 0.00% Coil/Unstructured: 58.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01402	RHH_1	73.87
PF01636	APH	1.80
PF02781	G6PD_C	1.80
PF13419	HAD_2	0.90
PF07690	MFS_1	0.90
PF08240	ADH_N	0.90
PF07730	HisKA_3	0.90
PF01526	DDE_Tnp_Tn3	0.90
PF02151	UVR	0.90
PF00296	Bac_luciferase	0.90
PF07505	DUF5131	0.90
PF00067	p450	0.90
PF00589	Phage_integrase	0.90
PF10094	DUF2332	0.90
PF07992	Pyr_redox_2	0.90
PF00400	WD40	0.90
PF13350	Y_phosphatase3	0.90
PF08751	TrwC	0.90
PF00583	Acetyltransf_1	0.90
PF01520	Amidase_3	0.90
PF01037	AsnC_trans_reg	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	1.80
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG2124	Cytochrome P450	Defense mechanisms [V]	0.90
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.90
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.90
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.90
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.90
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.90
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.90
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.07 %
Unclassified	root	N/A	27.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.07 %
Unclassified	root	N/A	27.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.07 %
Unclassified	root	N/A	27.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.66 %
Unclassified	root	N/A	27.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.95 %
Unclassified	root	N/A	27.93 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.83 %
Unclassified	root	N/A	27.93 %
Candidatus Dormibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter	0.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.80 %
unclassified Candidatus Dormibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.80 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	0.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.80 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.90 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	0.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.80 %
Nonomuraea cypriaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea cypriaca	0.90 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	0.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005445\|Ga0070708_100372779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1346	Open in IMG/M
3300005467\|Ga0070706_100304275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1487	Open in IMG/M
3300005467\|Ga0070706_101870280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300005471\|Ga0070698_101619115	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005518\|Ga0070699_101785120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300006904\|Ga0075424_102086380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	597	Open in IMG/M
3300009672\|Ga0116215_1265712	Not Available	749	Open in IMG/M
3300009792\|Ga0126374_10467972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300010046\|Ga0126384_10023338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4022	Open in IMG/M
3300010046\|Ga0126384_10114733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2015	Open in IMG/M
3300010361\|Ga0126378_10371075	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300010869\|Ga0126359_1429631	Not Available	615	Open in IMG/M
3300010876\|Ga0126361_11034528	Not Available	746	Open in IMG/M
3300012201\|Ga0137365_10821974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300012285\|Ga0137370_10572884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300012349\|Ga0137387_11181555	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012355\|Ga0137369_10076454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2818	Open in IMG/M
3300012357\|Ga0137384_10333909	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300012358\|Ga0137368_10137945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1820	Open in IMG/M
3300012359\|Ga0137385_10200290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1743	Open in IMG/M
3300012363\|Ga0137390_11128507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300012948\|Ga0126375_11352633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300012971\|Ga0126369_10543710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300014058\|Ga0120149_1177095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300016270\|Ga0182036_10183125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1521	Open in IMG/M
3300016319\|Ga0182033_11594756	Not Available	590	Open in IMG/M
3300016357\|Ga0182032_11679767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300016387\|Ga0182040_10252240	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300017955\|Ga0187817_11011818	Not Available	532	Open in IMG/M
3300017970\|Ga0187783_11049899	Not Available	587	Open in IMG/M
3300017974\|Ga0187777_11206398	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300018001\|Ga0187815_10161480	Not Available	948	Open in IMG/M
3300018058\|Ga0187766_10950645	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300018058\|Ga0187766_11049977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300018086\|Ga0187769_11040168	Not Available	620	Open in IMG/M
3300020150\|Ga0187768_1014390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1652	Open in IMG/M
3300020582\|Ga0210395_10966878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300020582\|Ga0210395_11436743	Not Available	503	Open in IMG/M
3300021403\|Ga0210397_10058120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2501	Open in IMG/M
3300021404\|Ga0210389_10514329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	942	Open in IMG/M
3300021406\|Ga0210386_10561608	Not Available	986	Open in IMG/M
3300021560\|Ga0126371_12262379	Not Available	656	Open in IMG/M
3300025910\|Ga0207684_11455314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300026294\|Ga0209839_10109812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	936	Open in IMG/M
3300026527\|Ga0209059_1290802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300027783\|Ga0209448_10194498	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300027874\|Ga0209465_10378130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300027879\|Ga0209169_10248017	Not Available	933	Open in IMG/M
3300027882\|Ga0209590_10306351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea cypriaca	1020	Open in IMG/M
3300028747\|Ga0302219_10404854	Not Available	534	Open in IMG/M
3300028773\|Ga0302234_10522289	Not Available	507	Open in IMG/M
3300028801\|Ga0302226_10237564	Not Available	775	Open in IMG/M
3300028877\|Ga0302235_10437567	Not Available	558	Open in IMG/M
3300029882\|Ga0311368_10152838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1884	Open in IMG/M
3300029997\|Ga0302302_1335887	Not Available	538	Open in IMG/M
3300030013\|Ga0302178_10291604	Not Available	753	Open in IMG/M
3300030057\|Ga0302176_10094493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1167	Open in IMG/M
3300030494\|Ga0310037_10303781	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300030494\|Ga0310037_10429848	Not Available	543	Open in IMG/M
3300030503\|Ga0311370_10647455	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300030524\|Ga0311357_10332806	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300031028\|Ga0302180_10334307	Not Available	772	Open in IMG/M
3300031234\|Ga0302325_10741548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1402	Open in IMG/M
3300031236\|Ga0302324_100356727	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300031546\|Ga0318538_10203352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1058	Open in IMG/M
3300031564\|Ga0318573_10199938	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300031680\|Ga0318574_10083334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1748	Open in IMG/M
3300031681\|Ga0318572_10970338	Not Available	505	Open in IMG/M
3300031682\|Ga0318560_10264658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300031713\|Ga0318496_10106351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1510	Open in IMG/M
3300031723\|Ga0318493_10594894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300031724\|Ga0318500_10109801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1264	Open in IMG/M
3300031747\|Ga0318502_10632022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300031748\|Ga0318492_10108265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1372	Open in IMG/M
3300031748\|Ga0318492_10397783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300031768\|Ga0318509_10770887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300031770\|Ga0318521_10701466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300031771\|Ga0318546_10700101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	713	Open in IMG/M
3300031771\|Ga0318546_10841768	Not Available	646	Open in IMG/M
3300031792\|Ga0318529_10315463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300031796\|Ga0318576_10079136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1474	Open in IMG/M
3300031805\|Ga0318497_10172739	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300031819\|Ga0318568_10536793	Not Available	729	Open in IMG/M
3300031821\|Ga0318567_10383958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300031846\|Ga0318512_10408468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	683	Open in IMG/M
3300031860\|Ga0318495_10097762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1320	Open in IMG/M
3300031890\|Ga0306925_10925241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300031890\|Ga0306925_10926417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	894	Open in IMG/M
3300031897\|Ga0318520_11079556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300031910\|Ga0306923_11116558	Not Available	848	Open in IMG/M
3300031912\|Ga0306921_11216926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300031941\|Ga0310912_10239077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1396	Open in IMG/M
3300031942\|Ga0310916_10864125	Not Available	760	Open in IMG/M
3300031947\|Ga0310909_10872794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	740	Open in IMG/M
3300032010\|Ga0318569_10488587	Not Available	574	Open in IMG/M
3300032044\|Ga0318558_10080906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1494	Open in IMG/M
3300032044\|Ga0318558_10243725	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300032054\|Ga0318570_10517578	Not Available	544	Open in IMG/M
3300032064\|Ga0318510_10240864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	741	Open in IMG/M
3300032065\|Ga0318513_10272337	Not Available	821	Open in IMG/M
3300032076\|Ga0306924_11081092	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300032090\|Ga0318518_10224214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300032091\|Ga0318577_10360366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300032160\|Ga0311301_10216491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3241	Open in IMG/M
3300032180\|Ga0307471_102630429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300032783\|Ga0335079_10244756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1974	Open in IMG/M
3300033134\|Ga0335073_12050540	Not Available	521	Open in IMG/M
3300033289\|Ga0310914_11800615	Not Available	517	Open in IMG/M
3300033290\|Ga0318519_10633038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300034172\|Ga0334913_005030	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.40%
Aquatic	Environmental → Aquatic	2.70%
Plants	Host-Associated → Plants	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.68%
Peat	Environmental → Terrestrial → Peat	11.71%
Freshwater	Environmental → Aquatic → Freshwater	2.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.11%
Loam	Environmental → Terrestrial → Soil → Loam	7.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.84%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.41%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.80%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070708_1003727793	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VIALEIADLVVIAGRTLGLDTGPVLDLFDLAAAEHALALARPRSEPGDPAAEAA
Ga0070706_1003042754	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VIALEVADLAVIASRTLGLDTDRVLDLLDVAAAERALDRARPGSDP
Ga0070706_1018702801	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VIALEIADLVVIAGRTLGLDTGPVLDLFDLAAAEHALALARLRSEPGDPAA
Ga0070698_1016191151	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIALELADLVVIASRTLGLDTGGVVDLLDPVAAERALALVRPGDAPGDPAGLAAT
Ga0070699_1017851202	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VITLEVADLVVIASRTLGLDTGPILDLLDLAAAEHALAQAR
Ga0075424_1020863803	3300006904	Populus Rhizosphere	MIGLGVGDLVIIAERTLRMDTSEVLDLLDPAAAEQ
Ga0116215_12657121	3300009672	Peatlands Soil	VIELEVADLVLIASRTLGLSTGQVLDLVDVAAAENALAEAQPGSGSAGPA
Ga0126374_104679724	3300009792	Tropical Forest Soil	MIELSVADLVLIASRTLAVDTDRVFDVFDVAAAEHAL
Ga0126384_100233381	3300010046	Tropical Forest Soil	VITLELADLVVIASRTLGLETGQVLELLDTAAAGEALAQAQPGSGSG
Ga0126384_101147331	3300010046	Tropical Forest Soil	VIALEVADLVVIASRTLGLDTGQVLDLLDLTAAEHA
Ga0126378_103710751	3300010361	Tropical Forest Soil	VIALEVADLVLIASRTLGLDTGQVLDLLDPPAAERALAQVRPGPGPGDPAGLA
Ga0126359_14296312	3300010869	Boreal Forest Soil	VIALEVADLVLIASRTLGLDTGQVLDLLDPAAAEHALAQARPGSEPAD
Ga0126361_110345282	3300010876	Boreal Forest Soil	VIVLEVADLVVIASRTLGLDTTAALELVDPAAAELALGQVR
Ga0137365_108219743	3300012201	Vadose Zone Soil	VITLEVADLVVIASRTLGLDTAQVLDLLDTTAAEHALAQARPGSEPGDLA
Ga0137370_105728842	3300012285	Vadose Zone Soil	VITLEVADLVVIASRTLGLDTAQVLDLLDTTAAEHALAQARPGSEPGDLATA
Ga0137387_111815551	3300012349	Vadose Zone Soil	VIALEVADLVVIASRTLGLDTDQVLDLLDPAAAERALAQAGPGREPGDPGR
Ga0137369_100764541	3300012355	Vadose Zone Soil	VIALEVADLVLIASRALDLDTDGVLNLLDSAAAEAALAQARSGGDRADPASRAGG
Ga0137384_103339093	3300012357	Vadose Zone Soil	VIALEVADLVLIASRTLGLDTGQVLDLVDVAAAENALAAAQPGSESADPALRAAALLHA
Ga0137368_101379453	3300012358	Vadose Zone Soil	VIALQLADLVVVAGRTLELNTGQVLDLLDPVAAEVALAQARPRGDAE
Ga0137385_102002903	3300012359	Vadose Zone Soil	VIALEVADLAVIASRTLGLDTDRVLDLLDVAAAERALDRARPGSDPADPAG
Ga0137390_111285073	3300012363	Vadose Zone Soil	VIALGLADLVIIASRTLKLDTGQVLDLLDTAAAGHALAQAQR
Ga0126375_113526332	3300012948	Tropical Forest Soil	VITLEVADLVVIAGRTLGLDTADVLDLLDPAAAEHALAEARAGSKPGDIATGAAALLH
Ga0126369_105437101	3300012971	Tropical Forest Soil	VIELEVADLVVIAGRALGLDTSQVLDLLDPAAAEQALAQARPASEPSERATPGVPA
Ga0120149_11770953	3300014058	Permafrost	MIAIEVAALVVIASRTLELDTGQVLGLLDPAAAKALE
Ga0182036_101831253	3300016270	Soil	VITLEVADLVVIASRTLGLETGQVLELLDTAAAGQAMAQARPGSGSGDPAA
Ga0182033_115947562	3300016319	Soil	VITLEVADLVVIASRTLGLETGQVLDLLDTAAAGQALIQA
Ga0182032_116797672	3300016357	Soil	VITLDVADLVVIAGRTLRLDTGQVLDLLDPAAAERALALVRPGSG
Ga0182040_102522403	3300016387	Soil	VIALEVADLVVIAGRTIGLRTGQVLDLLDAGAAEIALARARPGMDSGK
Ga0187817_110118182	3300017955	Freshwater Sediment	VITLEVADLVIIASRTIGLGTGQVLDLLDADAAEIALARARPGTDP
Ga0187783_110498991	3300017970	Tropical Peatland	VITLDLADLVVIAGRTLGLDTGQVLDLLDPAPAEHALALVRP
Ga0187777_112063981	3300017974	Tropical Peatland	VIALEVADLVLIASRTLGLGTGQVLDLLDPVAAERALDQARRGS
Ga0187815_101614801	3300018001	Freshwater Sediment	VIGLEVADLVLIASRTLGLDTGQVLDLVDVAAAENALAAAQPGSESAG
Ga0187766_109506451	3300018058	Tropical Peatland	VIALEVADLILIAGRTLGLDTGQVLDLLDPAAAEHALDQARP
Ga0187766_110499772	3300018058	Tropical Peatland	VISLEVAALVLIAGRTLGLATAQVLALLDPAAAERAL
Ga0187769_110401681	3300018086	Tropical Peatland	VIALEVADLVLIASRTLGLDTGQVLDLLDPAAAGHALAQARPGSGPASWRPD
Ga0187768_10143901	3300020150	Tropical Peatland	VIALEVADLVLIASRTLGLDAGQVLDLLDPAAAEH
Ga0210395_109668781	3300020582	Soil	VIALEVADLVLIADRTLGLDTGQVLDLVNVAAAENALAEAQQGSGS
Ga0210395_114367431	3300020582	Soil	VIALEVADLVLIASRTLGLGTGQVLDLLDPAAAEHALAEARP
Ga0210397_100581204	3300021403	Soil	VIALEVADLVVIAARTRRLDTAQVLDLLDPAAAERALAR
Ga0210389_105143291	3300021404	Soil	MITLEVADLVVIASRTLGLDTGQVLDLLDSATAEFALSQARPGDDLDDLAGHAAV
Ga0210386_105616081	3300021406	Soil	VIALEVADLVVIASRTLGLGTGQVLDRLDADAAEIALDRARPGQDPGDPADQA
Ga0126371_122623792	3300021560	Tropical Forest Soil	VIALELADLVVIAGRTLGLDTGQVIDLLDPGAAERALAQVCPGDAPGDPAGLAATLLRA
Ga0207684_114553141	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VIALEFADLIVIASHTLALDTGQVLDLLDPAAAELALDQARPGSESEPA
Ga0209839_101098121	3300026294	Soil	VISLEVADLVLIASRTLGLDTGQVLDLLDPAAAEHALAQARP
Ga0209059_12908022	3300026527	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALVRPGGG
Ga0209448_101944983	3300027783	Bog Forest Soil	VIALEVADLVLIASRTLGLDTGQVLDLLDPAAAEHALAQARPGSE
Ga0209465_103781301	3300027874	Tropical Forest Soil	VIELEVADLVLIAGRALGLDTGQVLDLLDPGAAEQALADARPVSEPGYRPSPG
Ga0209169_102480171	3300027879	Soil	VIALEVADLVLIASRTLGLGTGQVLDLLDPAAAEHALAEARPGSEPG
Ga0209590_103063511	3300027882	Vadose Zone Soil	VIALEVADLAVIASRTLGLDTDRVLDLLDAAAAGR
Ga0302219_104048542	3300028747	Palsa	MITLEVADLVVIASRTLGLDTGQVLGLLDATAAESALAQARLGRDPGDPAGRAAALLDA
Ga0302234_105222892	3300028773	Palsa	VITLEVADLVVIAGRTLGLDTAQVLDLLDPAAAERALAQARPGRDTG
Ga0302226_102375644	3300028801	Palsa	VIALEIADLVLIASRTLGLDTGQVLDLLDVAAAEHALAQA
Ga0302235_104375672	3300028877	Palsa	VIALGVADLVLIASRTLGLDTGQVLDLVDVAAAENALAEA
Ga0311368_101528381	3300029882	Palsa	MITLEVADLVVIASRTLGLDTGQVLGLLDATAAESALAQ
Ga0302302_13358872	3300029997	Palsa	MITLEVADLVVIASRTLGLDTGQVLGLLDATAAESALAQARLGRDPGDPAGRAAALLDAL
Ga0302178_102916041	3300030013	Palsa	VIALEIADLVLIASRTLGLDTGQVLDLLDVAAAEHALAQ
Ga0302176_100944931	3300030057	Palsa	VITLEVADLVVIAARALGLDTAQVLDLLDPAAAERALAQAR
Ga0310037_103037811	3300030494	Peatlands Soil	VIALEVADLVLIASRTLGLDTGQVLDLLDPAAAEHAL
Ga0310037_104298482	3300030494	Peatlands Soil	VIELEVADLVLIASRTLGLSTGQVLDLVDVAAAENALAE
Ga0311370_106474551	3300030503	Palsa	VTALEVEDLILIASHTLGVDTGQVLGLLDVAAAERALGEARPAGDPAADAA
Ga0311357_103328061	3300030524	Palsa	VIALELADLILIAGRTLGLDTGQVLGLLDVAAAERALDQARPAGHPAADAA
Ga0302180_103343071	3300031028	Palsa	VIALEIADLVLIASRTLGLDTGQVLDLLDVAAAEHALAQARPGSEPGDPAA
Ga0302325_107415481	3300031234	Palsa	VIALEIADLVLIASRTLGLDTGQVLDLLDVAAAEHALAQARPGSEPGDPAAGA
Ga0302324_1003567275	3300031236	Palsa	VIALEIADLVLIASRTLGLDTGQVLDLLDVAAAEHALAQARPGSEPGDPAAGAGALLHA
Ga0318538_102033523	3300031546	Soil	VITLELADLVVIASRTLGLETGQVLELLDTAAAGQALAQAQPGSGSGDPASPAVP
Ga0318573_101999381	3300031564	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALVRPGSGPGDPAGL
Ga0318574_100833343	3300031680	Soil	VITLEVADLVVIASRTLGLETGQVLELLDTAAAGQALAQAQPGSGSGDPATP
Ga0318572_109703381	3300031681	Soil	VIALEVADLVLSASRTLGLDTGQVLDLLDPAAAEHALD
Ga0318560_102646583	3300031682	Soil	MIELEVADLVVIAGRALALDTGQVLDLLDPAAAERALD
Ga0318496_101063511	3300031713	Soil	VITLEVADLVVIASRTLGLETGQVLELLDTAAAGQAMAQAR
Ga0318496_107495201	3300031713	Soil	MIELEVADLVVIAGRALALDTGQVLDLLDPAAAERALDQARPVSEPSDRLTPGAPAI
Ga0318493_105948941	3300031723	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALVRLGSGPGDPAGLAAVLL
Ga0318500_101098013	3300031724	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALVRPGSGPGDPAGQAAGR
Ga0318502_106320221	3300031747	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALVRPGS
Ga0318492_101082653	3300031748	Soil	VITLEVADLVVIASRTLGLETGQVLDLLDTAAAGQALI
Ga0318492_103977833	3300031748	Soil	MIELEVADLVVIAGRTLGLDTGLVLDLLDPAAAESAL
Ga0318509_107708872	3300031768	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALVRPGSGPGD
Ga0318521_107014662	3300031770	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALV
Ga0318546_107001011	3300031771	Soil	VITLEVADLVVIASRTLGLDTGEVLDLLDVAAAERALALVRP
Ga0318546_108417681	3300031771	Soil	VIALEVADLALIASRTLGLDTGQVLDLLDPAAAERALAQARPGSEPADP
Ga0318529_103154631	3300031792	Soil	VIALQVADLVLIASRTLGLDTGQVLDLLDPAAAERALAQARPGSEPADPAT
Ga0318576_100791363	3300031796	Soil	VITLELADLVVIASRTLGLETGQVLELLDTAAAGQALA
Ga0318497_101727391	3300031805	Soil	MIALEVADLVIIASRTLRLDTGLVLDLLDPAAAESALAQARPDSEPGDQGRDLPGRLR
Ga0318568_105367933	3300031819	Soil	VIALEVADLILIASRTLGLDTGQVLDLLDLDAAEHALD
Ga0318567_103839583	3300031821	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALA
Ga0318512_104084681	3300031846	Soil	VIELELADLVVIAGRTLGLDTDGVLDVLDAAGAERALAMVRP
Ga0318495_100977621	3300031860	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALVRPGSGPGDPAGLAA
Ga0306925_109252413	3300031890	Soil	MIALEVADLVIIASRTLRLDTGLVLDLLDPAAAESALAQAR
Ga0306925_109264171	3300031890	Soil	VIALEVADLVLSASRTLGLDTGQVLDLLDLAAAEHALDQARPGSESASPATCA
Ga0318520_110795563	3300031897	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALVRPGSGPGDPAGLAAV
Ga0306923_111165581	3300031910	Soil	VITLEVADLVVIAGRTLGLDAAQVLDLLDPAAAERALAQAQPGRDTGHLAR
Ga0306921_112169261	3300031912	Soil	VIALEVADLALIASRTLGLDTGQVLDLLDPAAAERALDQARPGSDPADPAACAA
Ga0310912_102390776	3300031941	Soil	VVITLEVADLVVIAGRTIGLRTGQVLDLLDAGAAEIALARARPG
Ga0310916_108641251	3300031942	Soil	VIALQVADLVLIASRTLGLDTGQVLDLLDPAAAEHALDQARPGSEPANPATCA
Ga0310909_108727943	3300031947	Soil	VITLEVADLVVIASRTLGLETGQVLDLLDTAAAGQALIQAQPGS
Ga0318569_104885872	3300032010	Soil	VIALEVADLILIASRTLGLDTGQVLDLLDLDAAEHALDQARPGSESAS
Ga0318558_100809061	3300032044	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERA
Ga0318558_102437251	3300032044	Soil	VITLEVADLVVIAGRTIGLRTGQVLDLLDAGAAEIALARARPGRD
Ga0318570_105175782	3300032054	Soil	VITLEVADLVVIASRTLGLETGQVLDLLDTAAAGQALIQAQPG
Ga0318510_102408643	3300032064	Soil	VIELELADLVVIAGRMLGLDTDGVLDVLDSAGAERALALIRPGGGPGDPAGLAATLLR
Ga0318513_102723372	3300032065	Soil	VITLEVADLVVIASRTLGLDTGEVLDLLDPAAADRALALVRPGRRAAARA
Ga0306924_110810921	3300032076	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALALVRPGSGP
Ga0318518_102242141	3300032090	Soil	VIALEVADLVLIASRTLGLDTGQVLDLLDPAAAERALAQARPGSEPADPAT
Ga0318577_103603663	3300032091	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERALAL
Ga0311301_102164911	3300032160	Peatlands Soil	VITLEVADLVVIAGRALGLDMAQVLDLLDPAAAERALAQARPGRGTGGLA
Ga0307471_1026304292	3300032180	Hardwood Forest Soil	MIELEVADLVVIAGRALGLDTGQVLDLLDPAAAERALDQARPVSEPSDRFTPGAP
Ga0335079_102447565	3300032783	Soil	VIALEVADLVVIASRTLGLDTGQVLDLLDPAAAEH
Ga0335073_120505402	3300033134	Soil	VIELEVADLVLIASRTLGLDTRQVLDLLDPAAAGHALAQARPGTEPGDPGTCAAVL
Ga0310914_118006151	3300033289	Soil	VIALEVADLALIASRTLGLDTGQVLDLLDPAAAERALDQARPGSDPA
Ga0318519_106330381	3300033290	Soil	VITLEVADLVVIASRTLGLDTGQVLDLLDPAAAERAL
Ga0334913_005030_3_128	3300034172	Sub-Biocrust Soil	VIALDVADLVVIAGRTLQLDTDQVLELLDLTAADHALAEARS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085247

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences