Metagenome Family F085232

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085232
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	48 residues
Representative Sequence	MKKQIKRTGDLAPTGVKSTIKGTYGFNEVFDHIFNEARKPDPSWKNN
Number of Associated Samples	79
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	2.70 %
% of genes near scaffold ends (potentially truncated)	12.61 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (46.847 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (29.730 % of family members)
Environment Ontology (ENVO)	Unclassified (48.649 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (48.649 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.33% β-sheet: 0.00% Coil/Unstructured: 78.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03796	DnaB_C	4.50
PF02195	ParBc	3.60
PF00216	Bac_DNA_binding	1.80
PF11753	DUF3310	0.90
PF00959	Phage_lysozyme	0.90
PF13472	Lipase_GDSL_2	0.90
PF06067	DUF932	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	4.50
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	4.50
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.38 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	48.65 %
Viruses	superkingdom	All Organisms → Viruses	29.73 %
Unclassified	root	N/A	21.62 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	46.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.23 %
Unclassified	root	N/A	21.62 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	46.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.23 %
Unclassified	root	N/A	21.62 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Thorarchaeota	phylum	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota	46.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.23 %
Unclassified	root	N/A	21.62 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.50 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Thorarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	46.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.23 %
Unclassified	root	N/A	21.62 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.50 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Thorarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	46.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.23 %
Unclassified	root	N/A	21.62 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	4.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Thorarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	46.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.23 %
Unclassified	root	N/A	21.62 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4.50 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002408\|B570J29032_109011213	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	566	Open in IMG/M
3300003404\|JGI25920J50251_10055970	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1021	Open in IMG/M
3300004112\|Ga0065166_10012460	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	2330	Open in IMG/M
3300004155\|Ga0066600_10031126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1771	Open in IMG/M
3300004240\|Ga0007787_10005548	Not Available	4796	Open in IMG/M
3300004240\|Ga0007787_10188338	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1002	Open in IMG/M
3300005517\|Ga0070374_10660238	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	517	Open in IMG/M
3300005525\|Ga0068877_10701324	Not Available	542	Open in IMG/M
3300005527\|Ga0068876_10274848	Not Available	961	Open in IMG/M
3300005527\|Ga0068876_10379174	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	791	Open in IMG/M
3300005581\|Ga0049081_10276873	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	583	Open in IMG/M
3300005662\|Ga0078894_11469743	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	567	Open in IMG/M
3300005805\|Ga0079957_1066461	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	2107	Open in IMG/M
3300006920\|Ga0070748_1066915	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1404	Open in IMG/M
3300007540\|Ga0099847_1000081	Not Available	28144	Open in IMG/M
3300007542\|Ga0099846_1078158	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1231	Open in IMG/M
3300008114\|Ga0114347_1122701	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	970	Open in IMG/M
3300008266\|Ga0114363_1005945	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	6178	Open in IMG/M
3300008266\|Ga0114363_1023656	All Organisms → Viruses → Predicted Viral	2674	Open in IMG/M
3300008266\|Ga0114363_1029998	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	2305	Open in IMG/M
3300008267\|Ga0114364_1011521	All Organisms → Viruses → Predicted Viral	4018	Open in IMG/M
3300008267\|Ga0114364_1017748	All Organisms → Viruses → Predicted Viral	3028	Open in IMG/M
3300008267\|Ga0114364_1151933	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	636	Open in IMG/M
3300009009\|Ga0105105_10594347	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	645	Open in IMG/M
3300009081\|Ga0105098_10074543	All Organisms → Viruses → Predicted Viral	1424	Open in IMG/M
3300009081\|Ga0105098_10291082	Not Available	782	Open in IMG/M
3300009082\|Ga0105099_10031012	All Organisms → Viruses → Predicted Viral	2753	Open in IMG/M
3300009082\|Ga0105099_11101542	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	509	Open in IMG/M
3300009085\|Ga0105103_10075617	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1726	Open in IMG/M
3300009165\|Ga0105102_10327057	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	800	Open in IMG/M
3300009165\|Ga0105102_10566802	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	624	Open in IMG/M
3300009168\|Ga0105104_10943759	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	508	Open in IMG/M
3300009169\|Ga0105097_10114897	All Organisms → Viruses → Predicted Viral	1474	Open in IMG/M
3300009169\|Ga0105097_10177883	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300010354\|Ga0129333_11691799	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	515	Open in IMG/M
3300011268\|Ga0151620_1001402	Not Available	9254	Open in IMG/M
3300012266\|Ga0136712_1005546	All Organisms → Viruses → Predicted Viral	1321	Open in IMG/M
3300012665\|Ga0157210_1000248	Not Available	26063	Open in IMG/M
3300013004\|Ga0164293_10125751	All Organisms → Viruses → Predicted Viral	1935	Open in IMG/M
3300013006\|Ga0164294_10006428	Not Available	10065	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10259730	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1141	Open in IMG/M
3300013372\|Ga0177922_11223794	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	656	Open in IMG/M
3300015050\|Ga0181338_1014382	Not Available	1272	Open in IMG/M
3300015050\|Ga0181338_1037428	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	728	Open in IMG/M
3300015050\|Ga0181338_1041943	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	679	Open in IMG/M
3300017697\|Ga0180120_10036061	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	2266	Open in IMG/M
3300017700\|Ga0181339_1003830	Not Available	1992	Open in IMG/M
3300017722\|Ga0181347_1115291	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	756	Open in IMG/M
3300017722\|Ga0181347_1210157	Not Available	508	Open in IMG/M
3300017723\|Ga0181362_1028084	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1200	Open in IMG/M
3300017754\|Ga0181344_1013438	All Organisms → Viruses → Predicted Viral	2601	Open in IMG/M
3300017754\|Ga0181344_1080627	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	955	Open in IMG/M
3300017761\|Ga0181356_1035093	All Organisms → Viruses → Predicted Viral	1782	Open in IMG/M
3300017785\|Ga0181355_1168080	Not Available	877	Open in IMG/M
3300019783\|Ga0181361_117403	Not Available	568	Open in IMG/M
3300019784\|Ga0181359_1000999	Not Available	7133	Open in IMG/M
3300019784\|Ga0181359_1127362	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	902	Open in IMG/M
3300020074\|Ga0194113_10044175	All Organisms → Viruses → Predicted Viral	4416	Open in IMG/M
3300020151\|Ga0211736_10753252	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1998	Open in IMG/M
3300020162\|Ga0211735_11191551	All Organisms → Viruses → Predicted Viral	2260	Open in IMG/M
3300021961\|Ga0222714_10014070	Not Available	6601	Open in IMG/M
3300021962\|Ga0222713_10611272	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	634	Open in IMG/M
3300021963\|Ga0222712_10517778	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	702	Open in IMG/M
3300022179\|Ga0181353_1007543	All Organisms → Viruses → Predicted Viral	2647	Open in IMG/M
3300022179\|Ga0181353_1011293	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	2256	Open in IMG/M
3300022179\|Ga0181353_1042277	All Organisms → Viruses → Predicted Viral	1203	Open in IMG/M
3300022179\|Ga0181353_1152294	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	531	Open in IMG/M
3300022200\|Ga0196901_1143418	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	800	Open in IMG/M
3300022407\|Ga0181351_1028297	All Organisms → Viruses → Predicted Viral	2379	Open in IMG/M
3300022407\|Ga0181351_1053941	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1671	Open in IMG/M
3300022407\|Ga0181351_1078287	All Organisms → Viruses → Predicted Viral	1323	Open in IMG/M
3300022543\|Ga0212119_1064150	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	579	Open in IMG/M
3300025543\|Ga0208303_1003952	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	5284	Open in IMG/M
3300025645\|Ga0208643_1110907	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	739	Open in IMG/M
3300027693\|Ga0209704_1062059	All Organisms → Viruses → Predicted Viral	1034	Open in IMG/M
3300027697\|Ga0209033_1048983	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1528	Open in IMG/M
3300027719\|Ga0209467_1123281	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	953	Open in IMG/M
3300027721\|Ga0209492_1000352	Not Available	14438	Open in IMG/M
3300027721\|Ga0209492_1001212	Not Available	7986	Open in IMG/M
3300027721\|Ga0209492_1236532	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300027792\|Ga0209287_10028367	All Organisms → Viruses → Predicted Viral	2032	Open in IMG/M
3300027797\|Ga0209107_10214791	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	943	Open in IMG/M
3300027816\|Ga0209990_10297532	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	723	Open in IMG/M
3300027841\|Ga0209262_10043207	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	2004	Open in IMG/M
3300027892\|Ga0209550_10548423	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	686	Open in IMG/M
3300027899\|Ga0209668_10121322	All Organisms → Viruses → Predicted Viral	1550	Open in IMG/M
3300027917\|Ga0209536_100235573	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	2294	Open in IMG/M
3300028025\|Ga0247723_1003073	Not Available	8492	Open in IMG/M
3300028025\|Ga0247723_1164645	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	510	Open in IMG/M
3300031578\|Ga0307376_10141843	All Organisms → Viruses → Predicted Viral	1667	Open in IMG/M
3300031669\|Ga0307375_10655995	Not Available	610	Open in IMG/M
3300031758\|Ga0315907_10025017	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	5463	Open in IMG/M
3300031758\|Ga0315907_10087122	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	2687	Open in IMG/M
3300031758\|Ga0315907_10178383	All Organisms → Viruses → Predicted Viral	1789	Open in IMG/M
3300031758\|Ga0315907_10181655	All Organisms → Viruses → Predicted Viral	1770	Open in IMG/M
3300031758\|Ga0315907_10259375	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	1439	Open in IMG/M
3300031758\|Ga0315907_11132821	Not Available	553	Open in IMG/M
3300031758\|Ga0315907_11132884	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	553	Open in IMG/M
3300031951\|Ga0315904_10796342	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	779	Open in IMG/M
3300031951\|Ga0315904_11220825	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	576	Open in IMG/M
3300031951\|Ga0315904_11459694	Not Available	506	Open in IMG/M
3300032093\|Ga0315902_11127324	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	573	Open in IMG/M
3300033816\|Ga0334980_0007717	All Organisms → Viruses → Predicted Viral	4740	Open in IMG/M
3300033993\|Ga0334994_0576760	Not Available	509	Open in IMG/M
3300033994\|Ga0334996_0000905	Not Available	19447	Open in IMG/M
3300033995\|Ga0335003_0496465	Not Available	504	Open in IMG/M
3300033996\|Ga0334979_0030922	All Organisms → Viruses → Predicted Viral	3564	Open in IMG/M
3300034062\|Ga0334995_0107038	All Organisms → Viruses → Predicted Viral	2106	Open in IMG/M
3300034093\|Ga0335012_0434131	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Thorarchaeota → Candidatus Thorarchaeota archaeon	636	Open in IMG/M
3300034104\|Ga0335031_0024041	All Organisms → Viruses → Predicted Viral	4459	Open in IMG/M
3300034104\|Ga0335031_0040640	All Organisms → Viruses → Predicted Viral	3374	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.40%
Terrestrial	Environmental → Terrestrial	3.60%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	85.59%
Marine	Environmental → Aquatic → Marine	10.81%
Soil	Environmental → Terrestrial → Soil	1.80%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.80%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	33.33%
Lake	Environmental → Aquatic → Freshwater → Lake	21.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	14.41%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	11.71%
Coastal	Environmental → Aquatic → Marine → Coastal	7.21%
Pond	Environmental → Aquatic → Freshwater → Pond	2.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.70%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.80%
Clay	Environmental → Terrestrial → Soil → Clay	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.80%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	31.53%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	21.62%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	14.41%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	11.71%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.21%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.80%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.90%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	29.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	14.41%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.81%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	9.91%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	6.31%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.41%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.70%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.80%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.80%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.80%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.90%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.90%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012266	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA to study Microbial Dark Matter (Phase II) - JTO19cm metaG	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017700	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019783	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022543	Indian_combined assembly	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027719	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1090112131	3300002408	Freshwater	MKKQIKRTGDLAPRGVRSTIKGTYGFNEVFDHIFNEARKPDPSWKNN*
JGI25920J50251_100559703	3300003404	Freshwater Lake	MKKEIKRTGDLAPRGVKSTIKGTYGFNEVMEQIFTETRKPDPSWKNN*
Ga0065166_100124604	3300004112	Freshwater Lake	MKKLFKAREIQRPGDLAPRDVKSTIRGTYGFNEVFEHIFTEARKPDPSWKNN*
Ga0066600_100311266	3300004155	Freshwater	MKKQIKRTGDLAPRGVRSTIRGTYGFNEVFQHIFNESRRPDETWKLN*
Ga0007787_1000554813	3300004240	Freshwater Lake	MKKLFKANNEIKRPGDLAPTGVKSTIKGTYGFNEVFDHIFTEVRKPDPSWKKN*
Ga0007787_101883384	3300004240	Freshwater Lake	MKKQIKRPGDLAPQGVKSTIRGTYQFNEVFQHIFNESRKPDPSWTR*
Ga0070374_106602382	3300005517	Freshwater Lake	MKKQLKRTGDLAPRGVRSTIKGTYGFNEVFDHIFNEARKPDPSWKNN*
Ga0068877_107013242	3300005525	Freshwater Lake	MKKKPIERPGDLAPKGVKSTIKGEYGFNETFEHIFKESRKPLKQ*
Ga0068876_102748481	3300005527	Freshwater Lake	MKKKPIERPGDLAPKGVKSTIKGEYGFNETFEHIF
Ga0068876_103791742	3300005527	Freshwater Lake	MKKEIKRPEDLAPKGVKSTIKGNYSFNEVFQHIYNEARKPDEAWKSN*
Ga0049081_102768731	3300005581	Freshwater Lentic	MKKQIQRPGDLAPQGVKSTIKGNYSFNEVFEHIYNEARKPDKSWKSN*
Ga0078894_114697432	3300005662	Freshwater Lake	MKLFKANKGIQRPGDLTPKGVKSTIRGNYSFNEVMQHIFNEGRKPDPLWKSN*
Ga0079957_10664617	3300005805	Lake	MKKQIQRPGDLAPQGVKSTIKGNYSFNEVFENIFNQSRKPEESWKRS*
Ga0070748_10669154	3300006920	Aqueous	MKLFKAREIKRPEDLTPRGVKSTIRGTYGFNEVFEHIFNESRKPDPLWKSN*
Ga0099847_100008121	3300007540	Aqueous	MKLFKAQEIKRPGDLAPRGVKSTIRGTYGFNEVFEHIFNESRKPDPLWKSN*
Ga0099846_10781582	3300007542	Aqueous	MKKEIKRPGDLAPRGVKSTIKGEYGFNEVFEHIYKESRKPDPSWTR*
Ga0114347_11227013	3300008114	Freshwater, Plankton	MKKQIQRPGDLAPQGVKSTIKGNYSFNEVFENIFNQSRKPDESWKHN*
Ga0114363_100594516	3300008266	Freshwater, Plankton	MKKQIKRTGDLAPTGVKSTIKGTYGFNEVFDHIFNEARKPDPSWKNN*
Ga0114363_10236562	3300008266	Freshwater, Plankton	MKKEIKRPGDLAPTGVKSTIKGEYDFNEVFDHIYKESRKPDPSWTR*
Ga0114363_10299988	3300008266	Freshwater, Plankton	MKKEIKRTGDLAPRGVKSTIRGTYGFNEVFQHIFIEARRPDKAWKHN*
Ga0114364_10115212	3300008267	Freshwater, Plankton	MKLFKAREIERPGDLAPTGVRSTIKGTYGFNEVFDHIFNEARKPDPSWKNN*
Ga0114364_10177484	3300008267	Freshwater, Plankton	MKKEIKRPGDLAPTGVKSTIKGEYGFNEVFDHIYKESRKPDPSWTR*
Ga0114364_11519333	3300008267	Freshwater, Plankton	MKLFKAREIERPGDLAPKGVKSTIKGTYGFNEVFEHIFTEARKPDPSWKNN*
Ga0105105_105943471	3300009009	Freshwater Sediment	MKLFKANKGIQRPGDLAPKGVKSTIRGTYGFNEVMEHIFNERRKPD
Ga0105098_100745434	3300009081	Freshwater Sediment	MITLFKANKEIKRPGDLAPKGVKSTIKGNYGFNEVMEHIFNEMRKPDPSWKNN*
Ga0105098_102910822	3300009081	Freshwater Sediment	MKKKKEIETPGDLAPLGVKSTIKGNYTFNEVFQHIHKEAHKPIK*
Ga0105099_100310125	3300009082	Freshwater Sediment	MKLFKASKEIKRPGDLAPRGVKNTIRGTYGFNEVMQHIFNESRKPDPSWKKN*
Ga0105099_111015421	3300009082	Freshwater Sediment	MKKLFKANNEIKRPGDLAPRGVKSTIRGTYGFNEVFEHIFTESRKPDPSWKKN*
Ga0105103_100756173	3300009085	Freshwater Sediment	MITLFKANKEIKRPGDLAPRGVKSTIKGNYGFNEVMEHIFNEMRKPDPLWKKN*
Ga0105102_103270572	3300009165	Freshwater Sediment	MVTLFKAKKEIKRPGDLTPKGVKSTIKGNYGFNEVMEHIFNEMRKPDPSWKKN*
Ga0105102_105668022	3300009165	Freshwater Sediment	MKLFKANKGIKRPGDLAPRGVKSTIKGNYGFNEVMEHIFNEMRKPDPSWKKN*
Ga0105104_109437593	3300009168	Freshwater Sediment	MKKLFKANNEIKRPGDLAPTGVRSTIKGTYGFNEVFDHIFNEARKPDPSW
Ga0105097_101148974	3300009169	Freshwater Sediment	MKLFKANKGIQRPGDLAPKGVKSTIKGNYGFNEVMEHIFNEMRKPDPSWKKN*
Ga0105097_101778833	3300009169	Freshwater Sediment	MITLFKANKEIKRPGDLAPRGVKSTIKGNYDFNEVMEHVFNEMRKPDPSWKKN*
Ga0129333_116917993	3300010354	Freshwater To Marine Saline Gradient	MKKQIKRPGDLAPRGVKSTIRGTYEFNEVFQHIFNESRKPDEAWKLN*
Ga0151620_100140211	3300011268	Freshwater	MKKQIQRPGDLAPQGVRSTIKGNYGFNEVFEHIYNEARKPDPAWNQK*
Ga0136712_10055464	3300012266	Freshwater	MKKQIKRTGDLAPRGVRSTIKGTYSFNEVFDHIFNEARKPDLSWKNN*
Ga0157210_100024827	3300012665	Freshwater	MRKLFKAREIERPGDLAPTGVKSTIRGTYGFNEVFEHIFTEARKPDPSWKNN*
Ga0164293_101257514	3300013004	Freshwater	MKKQIKRTGDLAPTGVRSTIKGTYGFNEVFDHIFNEARKPDPSWKNN*
Ga0164294_1000642825	3300013006	Freshwater	MKKLFKTREIQRTGDLAPTGVRSTIKGTYEFNEVFDHIFNEARKPDASWKNN*
(restricted) Ga0172373_102597303	3300013131	Freshwater	MKKEIKRTGDLAPRGVKSTIKGNYSFNEVFQLIYNEARKPDKAWKHN*
Ga0177922_112237943	3300013372	Freshwater	TGDLAPRGVRSTIKGTYEFNEVMEQIFTEARKPDPSWKNN*
Ga0181338_10143827	3300015050	Freshwater Lake	MKKEIKRTGDLAPKGVKSTIKGTYGFNEVMEQIFTETRKPDPS
Ga0181338_10374282	3300015050	Freshwater Lake	MKKQLKRTGDLAPRGVRSTIKGTYEFNEVMEQIFTEARKPDPSWKNN*
Ga0181338_10419434	3300015050	Freshwater Lake	MKKEIKRTGDLAPRGVKSTIKGTYGFNEVMEQIFTETRKPD
Ga0180120_100360617	3300017697	Freshwater To Marine Saline Gradient	MMKLFKAQEIKRPGDLAPRGVKSTIRGTYGFNEVFEHIFNESRKPDPLWKSN
Ga0181339_100383010	3300017700	Freshwater Lake	MKKEIKRTGDLAPRVVKSTIKGTYGFNEVMKQIFTEARKPDPSWK
Ga0181347_11152912	3300017722	Freshwater Lake	MMKLFKAREIERPGDLAPTGVRSTIKGTYGFNEVFDHIFTETRKPDPSWKNN
Ga0181347_12101571	3300017722	Freshwater Lake	MKKEIKRTGDLAPRGVKSTIKGTYGFNEVFDQIFNEARKPDP
Ga0181362_10280842	3300017723	Freshwater Lake	MKKEIKRTGDLAPRGVKSTIKGTYGFNEVMEQIFTETRKTDPSWKNN
Ga0181344_101343810	3300017754	Freshwater Lake	MKKLFKAREIQRPGDLAPRDVKSTIRGTYGFNEVFEHIFTEARKPDPSWKNN
Ga0181344_10806272	3300017754	Freshwater Lake	MKKEIKRPGDLAPTGVKSTIKGDYGFNEVFDHIYKESRKPDPSWTR
Ga0181356_10350935	3300017761	Freshwater Lake	MKKQLKRTGDLAPRGVRSTIKGTYEFNEVMEQIFTEARKPDPSWKNN
Ga0181355_11680805	3300017785	Freshwater Lake	MKKEIKRTGDLAPKGVKSTIKGTYGFNEVMEQIFTETR
Ga0181361_1174032	3300019783	Freshwater Lake	MKKEIKRTGDLAPKGVKSTIKGTYGFNEVMEQIFTETRKPDPSWKNN
Ga0181359_10009996	3300019784	Freshwater Lake	MKKEIKRTGDLAPRGVKSTIKGTYGFNEVMEQIFTETRKPDPSWKNN
Ga0181359_11273623	3300019784	Freshwater Lake	MKKQIKRTGDLAPRGVRSTIKGTYSFNEVFDYIFNEARKPDLSWKNN
Ga0194113_100441753	3300020074	Freshwater Lake	MKKEIKRTGDLAPKGVKSTIKGNYSFNKVFEHIYNEARKPDESWKHK
Ga0211736_107532529	3300020151	Freshwater	MKKEIKRTGDLAPTGVKSTIKGEYDFNEVFEHIYKESRKPDASWTK
Ga0211735_111915515	3300020162	Freshwater	MKKEIKRTGDLAPRGVKSTIRGTYGFNEVFEHIFIEARRPDKAWKHN
Ga0222714_1001407010	3300021961	Estuarine Water	MKKQIQRPGDLAPQGVRSTIKGNYGFNEVFEHIYNEARKPDPAWNQK
Ga0222713_106112721	3300021962	Estuarine Water	MKKQIQRPGDLAPQGVKSTIRGNYSFNEVFENIFNQSRKPDKAWKIK
Ga0222712_105177781	3300021963	Estuarine Water	MKKQIQRPGDLAPQGVKSTIKGNYSFNEVFEHIYNEARKPDPAWNQK
Ga0181353_10075433	3300022179	Freshwater Lake	MKKLFKANNEIKRPGDLAPTGVKSTIKGTYGFNEVFDHIFTEVRKPDPSWKKN
Ga0181353_10112934	3300022179	Freshwater Lake	MKKQIKRPGDLAPQGVRSTIRGTFGFNEVFEHIHNEARKPDPSWKRN
Ga0181353_10422771	3300022179	Freshwater Lake	IFKANKGIQRPGDLTPKGVKSTIRGNYSFNEVMQHIFNEGRKPDPLWKSN
Ga0181353_11522941	3300022179	Freshwater Lake	MKLFKANKGIQRPGDLTPKGVKSTIRGNYSFNEVMQHIFNEGRK
Ga0196901_11434182	3300022200	Aqueous	MKKEIKRPGDLAPRGVKSTIKGEYGFNEVFEHIYKESRKPDPSWTR
Ga0181351_10282975	3300022407	Freshwater Lake	MMKLFKANKGIQRPGDLTPKGVKSTIRGNYSFNEVMQHIFNEGRKPDPLWKSN
Ga0181351_10539413	3300022407	Freshwater Lake	MKKQIKRPGDLAPRGVKSTIRGTYGFNEVFQHIFNESRRPDEAWKLN
Ga0181351_10782874	3300022407	Freshwater Lake	MKKEIKRTGDLAPRGVKSTIKGTYGFNEVFDQIFNEARKPDPSWKNN
Ga0212119_10641503	3300022543	Freshwater	MKKLFKANNEIKRPGDLAPKGVKSTIRGTYGFNEVFEHIFTEARKPDPSWKKN
Ga0208303_10039527	3300025543	Aqueous	MKLFKAQEIKRPGDLAPRGVKSTIRGTYGFNEVFEHIFNESRKPDPLWKSN
Ga0208643_11109072	3300025645	Aqueous	MKLFKAREIKRPEDLTPRGVKSTIRGTYGFNEVFEHIFNESRKPDPLWKSN
Ga0209704_10620592	3300027693	Freshwater Sediment	MKLFKANKGIKRPGDLTPKGVKSTIKGNYGFNEVMEHIFNEMRKPDPSWKKN
Ga0209033_10489833	3300027697	Freshwater Lake	MKKQIKRPGDLAPQGVKSTIRGTYQFNEVFQHIFNESRKPDPSWTR
Ga0209467_11232811	3300027719	Freshwater	MKKQIKTPGDLAPRGVKSTIRGTYEFNEVFEHIYNESRKPDPSWKLK
Ga0209492_100035222	3300027721	Freshwater Sediment	MITLFKANKEIKRPGDLAPRGVKSTIKGNYDFNEVMEHVFNEMRKPDPSWKKN
Ga0209492_10012122	3300027721	Freshwater Sediment	MVTLFKAKKEIKRPGDLTPKGVKSTIKGNYGFNEVMEHIFNEMRKPDPSWKKN
Ga0209492_12365322	3300027721	Freshwater Sediment	MKKKKEIETPGDLAPLGVKSTIKGNYTFNEVFQHIHKEAHKPIK
Ga0209287_100283675	3300027792	Freshwater Sediment	MKKLFKANNEIKRPGDLAPRGVKSTIRGTYGFNEVFEHIFTESRKPDPSWKKN
Ga0209107_102147913	3300027797	Freshwater And Sediment	MKKEIKRTGDLAPRGVRSTIKGTYGFNEVFDHIFNEARKPDSSWKNN
Ga0209990_102975323	3300027816	Freshwater Lake	MKKEIKRPEDLAPKGVKSTIKGNYSFNEVFQHIYNEARKPDEAWKSN
Ga0209262_100432073	3300027841	Freshwater	MKKQIKRTGDLAPRGVRSTIRGTYGFNEVFQHIFNESRRPDETWKLN
Ga0209550_105484233	3300027892	Freshwater Lake	MKKQIKRTGDLAPRGVRSTIKGTYSFNEVFDHIFNETRKPDLSWKNN
Ga0209668_101213225	3300027899	Freshwater Lake Sediment	MKLFKAREIERPADLAPTGVKSTIRGTYGFNEVFEHIFTEARKPDPSWKNN
Ga0209536_1002355733	3300027917	Marine Sediment	MMKLFKAREIKRPEDLTPRGVKSTIRGTHGFNEVFEHIFNESRKPDPLWKSN
Ga0247723_10030734	3300028025	Deep Subsurface Sediment	MMKLFKAREIERPGDLAPTGVKSTIKGTYGFNEVFDHIFNEARKPDPSWKNN
Ga0247723_11646453	3300028025	Deep Subsurface Sediment	GDLAPTGVRSTIKGTYGFNEVFEHIFTEARKPDPSWKNN
Ga0307376_101418434	3300031578	Soil	MKKEIKRPGDLAPRGVKSTIKGEYDFNEVFEHIYKESRKPDPSWTK
Ga0307375_106559953	3300031669	Soil	MKKEIKRPGDLAPRGVKSTIRGTYGFNEVFEHIYKESRKPDPSWTR
Ga0315907_100250177	3300031758	Freshwater	MKKQIQRPGDLAPQGVKSTIKGNYSFNEVFENIFNQSRKPDESWKHN
Ga0315907_100871225	3300031758	Freshwater	MKKQIQRPGDLAPQGVKSTIKGNYSFNEVFEHIYNEARKPDKSWKSN
Ga0315907_101783833	3300031758	Freshwater	MKKQIKRTGDLAPTGVKSTIKGTYGFNEVFDHIFNEARKPDPSWKNN
Ga0315907_101816554	3300031758	Freshwater	MKKEIKRTGDLAPRGVKSTIRGTYGFNEVFQHIFIEARRPDKAWKHN
Ga0315907_102593753	3300031758	Freshwater	MKKEIKRPGDLAPTGVKSTIKGEYDFNEVFDHIYKESRKPDPSWTR
Ga0315907_111328213	3300031758	Freshwater	MKKKPIERPGDLAPKGVKSTIKGEYGFNETFEHIFKESRKPLKQ
Ga0315907_111328841	3300031758	Freshwater	MKKQIKRPGDLAPTGVKSTIKGEYGFNEVFDHIYKESRKPDPSWTR
Ga0315904_107963423	3300031951	Freshwater	MKLFKANKGIQRPGDLTPKGVKSTIRGNYSFNEVMQHIFNEGRKPDPLWKSN
Ga0315904_112208253	3300031951	Freshwater	MKKQIKRPGDLAPRGVKSTIRGTYEFNEVFQHIFIEARRPDKAWKHN
Ga0315904_114596943	3300031951	Freshwater	RQIQDCKAMKKKPIERPGDLAPKGVKSTIKGEYGFNETFEHIFKESRKPLKQ
Ga0315902_111273242	3300032093	Freshwater	MKKQIKRPGDLAPQGVKSTIRGTYQFNEVFQHIFNESRKPDEAWKLN
Ga0334980_0007717_2658_2819	3300033816	Freshwater	MKKLFKANNEIKRPGDLAPRGVKSTIKGTYGFNEVFEHIFTESRKPDPSWKKN
Ga0334994_0576760_84_242	3300033993	Freshwater	MKKLFKTREIQRTGDLAPTGVRSTIKGTYGFNEVFDHIFNEARKPDPSWKNN
Ga0334996_0000905_14618_14776	3300033994	Freshwater	MKKLFKAREIQRTGDLAPRGVKSTIRGTYGFNEVFEHIFTEARKPDPSWKNN
Ga0335003_0496465_285_428	3300033995	Freshwater	MKKQIKRTGDLAPRGVKSTIKGTYGFNEVFDHIFTEARKPDPSWKNN
Ga0334979_0030922_346_489	3300033996	Freshwater	MKKQIKRTGDLAPTGVRSTIKGTYGFNEVFDHIFNEARKPDPSWKNN
Ga0334995_0107038_1374_1535	3300034062	Freshwater	MMKKLFKTREIQRTGDLAPTGVRSTIKGTYGFNEVFDHIFNEARKPDPSWKNN
Ga0335012_0434131_199_354	3300034093	Freshwater	MKLFKAREIERPGDLAPTGVRSTIKGTYGFNEVFDHIFNEARKPDPSWKNN
Ga0335031_0024041_4161_4316	3300034104	Freshwater	MKLFKAREIERPGDLAPTGVKSTIKGTYGFNEVFDHIFNEARKPDPSWKNN
Ga0335031_0040640_1407_1568	3300034104	Freshwater	MKKLFKANNEIKRPGDLAPRGVKSTIRGTYGFNEVFEHIFTEARKPDPSWKKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters