Metagenome Family F085231

Basic Information
Family ID	F085231
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	60 residues
Representative Sequence	MKEQLMAAGLSYLRAAASCAAALYMSGITDPKTLANAFIAGLLGPLLRAMNPSDNTFGVK
Number of Associated Samples	79
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	74.77 %
% of genes near scaffold ends (potentially truncated)	23.42 %
% of genes from short scaffolds (< 2000 bps)	73.87 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (94.595 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (29.730 % of family members)
Environment Ontology (ENVO)	Unclassified (72.072 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 12199914418 2JGI12421J11937_100125912 3B570J40625_10010244510 4B570J40625_1001456616 5JGI25909J50240_10515491 6JGI25907J50239_11150831 7JGI25920J50251_100014047 8Ga0065861_10805235 9Ga0070374_100728015 10Ga0049085_101653433 11Ga0049082_100634102 12Ga0079957_10027277 13Ga0070748_12517953 14Ga0102828_10196364 15Ga0102859_12640672 16Ga0105736_11312243 17Ga0105746_11832201 18Ga0105747_10779761 19Ga0114880_10575363 20Ga0102829_10317852 21Ga0102829_13404862 22Ga0114980_100351634 23Ga0114980_107917591 24Ga0114980_108563302 25Ga0114978_100415612 26Ga0114978_103185992 27Ga0114978_104470542 28Ga0114979_100298963 29Ga0114979_100319556 30Ga0114979_101158403 31Ga0114979_107186992 32Ga0114974_101273322 33Ga0133913_108917142 34Ga0133913_129273313 35Ga0138308_1076205 36Ga0139557_10266661 37Ga0153799_10535772 38Ga0153801_10261821 39Ga0157203_10286821 40Ga0157210_10258111 41Ga0136641_10193991 42Ga0136641_10254024 43Ga0177922_110916502 44Ga0119960_10678383 45Ga0181350_10490932 46Ga0181347_10901563 47Ga0181362_10074715 48Ga0181362_10838101 49Ga0181365_10080561 50Ga0181365_11171303 51Ga0181365_11644052 52Ga0181344_11717612 53Ga0181356_10550344 54Ga0181356_11050123 55Ga0181358_10230145 56Ga0181358_11909252 57Ga0181357_10163929 58Ga0181357_10188815 59Ga0181346_12307932 60Ga0181348_13092942 61Ga0181355_10612153 62Ga0181355_12297882 63Ga0181359_10456771 64Ga0181359_10535434 65Ga0181359_10594372 66Ga0181359_11380902 67Ga0181359_11973091 68Ga0207193_11543532 69Ga0211726_109270232 70Ga0211726_110086501 71Ga0211729_114075043 72Ga0222713_105007522 73Ga0222712_100529706 74Ga0181354_11588553 75Ga0181351_12052562 76Ga0244775_104469663 77Ga0244775_109525782 78Ga0208926_10375342 79Ga0208133_10711111 80Ga0209769_11477633 81Ga0209297_10545425 82Ga0209087_101051010 83Ga0209296_100319714 84Ga0209296_13986641 85Ga0209088_101280202 86Ga0209246_103388451 87Ga0209246_103536451 88Ga0209107_100098946 89Ga0209107_100322096 90Ga0209354_100714092 91Ga0209298_100453436 92Ga0315274_119851432 93Ga0315905_114469982 94Ga0334980_0184650_591_773 95Ga0334981_0067551_380_562 96Ga0334982_0139838_951_1133 97Ga0335003_0262498_557_739 98Ga0334979_0037158_2237_2419 99Ga0334986_0029192_1418_1600 100Ga0334986_0041444_378_560 101Ga0334986_0284279_629_811 102Ga0334986_0433316_268_450 103Ga0334987_0117999_337_519 104Ga0334987_0255181_859_1041 105Ga0334995_0238095_23_205 106Ga0335031_0004960_3020_3202 107Ga0335036_0183628_1195_1377 108Ga0335036_0361815_494_676 109Ga0335066_0465568_1_153 110Ga0335068_0187748_181_363 111Ga0335017_0003718_7699_7881
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78. 12199914418 2B570J40625_1001456616 3JGI25907J50239_11150831 4Ga0065861_10805235 5Ga0070374_100728015 6Ga0049085_101653433 7Ga0105736_11312243 8Ga0105747_10779761 9Ga0114980_108563302 10Ga0114979_100319556 11Ga0181347_10901563 12Ga0181348_13092942 13Ga0181359_11973091 14Ga0209769_11477633 15Ga0209246_103388451
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1Ga0133913_108917142 2JGI12421J11937_100125912 3JGI25909J50240_10515491 4Ga0065861_10805235 5Ga0070374_100728015 6Ga0049085_101653433 7Ga0079957_10027277 8Ga0114978_100415612 9Ga0114978_104470542 10Ga0114979_100298963 11Ga0114979_100319556 12Ga0133913_129273313 13Ga0157210_10258111 14Ga0136641_10193991 15Ga0119960_10678383 16Ga0181358_11909252 17Ga0181357_10163929 18Ga0181348_13092942 19Ga0181355_10612153 20Ga0181359_10456771 21Ga0181359_11973091 22Ga0211726_109270232 23Ga0211729_114075043 24Ga0222712_100529706 25Ga0209297_10545425 26Ga0209296_100319714 27Ga0334982_0139838_951_1133 28Ga0334995_0238095_23_205 29Ga0335017_0003718_7699_7881
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13539	Peptidase_M15_4	60.36
PF01844	HNH	3.60
PF05257	CHAP	1.80
PF00196	GerE	1.80
PF03354	TerL_ATPase	0.90
PF13671	AAA_33	0.90
PF05065	Phage_capsid	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.90
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	2.70 %
Unclassified	root	N/A	0.00 %
Viruses	superkingdom	All Organisms → Viruses	97.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.70 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	94.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	94.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	0.00 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	94.59 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	94.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	94.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.70 %
Unclassified	root	N/A	0.00 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	94.59 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352003\|2199765701	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	693	Open in IMG/M
3300000756\|JGI12421J11937_10012591	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3227	Open in IMG/M
3300002835\|B570J40625_100102445	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3524	Open in IMG/M
3300002835\|B570J40625_100145661	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2722	Open in IMG/M
3300003393\|JGI25909J50240_1051549	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	854	Open in IMG/M
3300003394\|JGI25907J50239_1115083	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522	Open in IMG/M
3300003404\|JGI25920J50251_10001404	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8634	Open in IMG/M
3300004448\|Ga0065861_1080523	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1594	Open in IMG/M
3300005517\|Ga0070374_10072801	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1791	Open in IMG/M
3300005583\|Ga0049085_10165343	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	743	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	86.49%
Marine	Environmental → Aquatic → Marine	13.51%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	4.50%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.50%
Lake	Environmental → Aquatic → Freshwater → Lake	45.05%
Lentic	Environmental → Aquatic → Freshwater → Lentic	36.94%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.70%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.50%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.24%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	31.53%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.90%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.90%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.50%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.70%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.80%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	16.22%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.21%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.90%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.70%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	29.73%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	17.12%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.80%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.90%
Lake Chemocline	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Chemocline	0.90%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.90%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352003	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2199914418	2199352003	Freshwater	MKEQAIAAGLSYLRAAASCAAALYMSGISDPKTLANAFIAGLIGPLLRGLNHSDKTFGVK
JGI12421J11937_100125912	3300000756	Freshwater And Sediment	MKEQAIAAGLSYLRAAASCAAALYMSGISDPKTLANAFIAGLIGPLLRGLNTADKTFGVK
B570J40625_10010244510	3300002835	Freshwater	MKEQAKAAGLSYLRAAFSCAAALYMSGITDWKTLGNAFIAGLLGPLLRAMNPSDSTFGVK
B570J40625_1001456616	3300002835	Freshwater	MKEQAKAAGLSYLRAAFSCAAALYMSGITDWKTLGNAFIAGLLGPLLRAM
JGI25909J50240_10515491	3300003393	Freshwater Lake	MKDQLMAAGLSYLRHAATCAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPTDKSFGVK
JGI25907J50239_11150831	3300003394	Freshwater Lake	MKDQLMAAGLSYLRHAATCAAALYMSGVTDPKTLANAFLAGLIGPLLRALNP
JGI25920J50251_100014047	3300003404	Freshwater Lake	MKEQLQAAGLSYLRHAATCAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKSFGVK
Ga0065861_10805235	3300004448	Marine	MIEQLKAAGLSYLRAAFSCAAALYMSGITDWKTLGNAFIAGALAPIMRAMNPSDKTYGVK
Ga0070374_100728015	3300005517	Freshwater Lake	MKEQLKAAGMSYLRHALTCVAALYMSGIQDPKVLANAFLAGLIGPLLRASSPKDDKFGVGAK*
Ga0049085_101653433	3300005583	Freshwater Lentic	RAIRSTNMKEQLKAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKTYGVK*
Ga0049082_100634102	3300005584	Freshwater Lentic	MAAGLSYLRHAATCAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKSFGVK*
Ga0079957_10027277	3300005805	Lake	MKDQLIAAGVSYLRHAGTCAAALYMSGVTDPKTLANAFIAGLIGPLLRGLNHSDKTFGIK
Ga0070748_12517953	3300006920	Aqueous	MKEQAKAAGLSYLRAAFSCAAALYMSGITDWKTLGNAFIAGLLGPLLRAMNPSDNTFGV
Ga0102828_10196364	3300007559	Estuarine	MKEQLQAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKTYGVK
Ga0102859_12640672	3300007708	Estuarine	MKEQAIAAGLSYLRAAASCAAALYMSGITDPKTLANAFVAGLLGPLLRAMNPSDKTFGTK
Ga0105736_11312243	3300007861	Estuary Water	LAAGLSYLRHAGTCVAALYMSGISDPKTLAKAFLAGLLAPIMRGLNTSDKTFGVK*
Ga0105746_11832201	3300007973	Estuary Water	MKEQAKAAGLSYLRAAISCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDPTF
Ga0105747_10779761	3300007974	Estuary Water	LSYLRAAISCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDPTFGVK*
Ga0114880_10575363	3300008450	Freshwater Lake	MKEQLKAAGLSYLRHALTCVAALYMSGIQDPKVLANAFLAGLIGPLLRASAPNDNKFGLGAK*
Ga0102829_10317852	3300009026	Estuarine	MKEQAIAAGLSYLRAAVSCAAALYMSGITDPKTLANAFVAGLLGPLLRAMNPSDKTFGTK
Ga0102829_13404862	3300009026	Estuarine	MKDQLMAAGLSYLRHAATCAAALYMSGVKDPKTLANAFLAGLIGPLLRALNPSDKSFGVK
Ga0114980_100351634	3300009152	Freshwater Lake	MKEQAKAAGLSYLRAAFSCAAALYMSGITDPKTLANAFVAGLLGPLLRAMNRSDKTFGAK
Ga0114980_107917591	3300009152	Freshwater Lake	TAGLSYLRAALSCAAALYMSGITDPKTLANAFIAGALAPLMRALNPNDKSFGVK*
Ga0114980_108563302	3300009152	Freshwater Lake	RHAATCAAALYMSGVTDPKTLANAFIAGLIGPLLRSLNTSDKTFGVK*
Ga0114978_100415612	3300009159	Freshwater Lake	MKKQLKAAGLSYLRAAASCAAALYMSGITDPKTLANAFIAGALAPLMRAMNPSDKTYGVK
Ga0114978_103185992	3300009159	Freshwater Lake	MGGFKLKTQFMAAGLSYLRHAATCAAALYMSGITDPKTLANAFLAGLIGPLLRALNSSDKTYGVK*
Ga0114978_104470542	3300009159	Freshwater Lake	MGGLKLKTQLMAAGLSYLRHAATCAAALYMSGITDPKTLANAFLAGLIGPLLRALNSSDKTYGIK*
Ga0114979_100298963	3300009180	Freshwater Lake	MKDQVMAAGLSYLRHAATCAAALYMSGVTDPKTLANAFIAGLIGPLLRSLNTSDKTFGVK
Ga0114979_100319556	3300009180	Freshwater Lake	MGGLKLKTQIQTAGLSYLRAALSCAAALYMSGITDPKTLANAFIAGALAPLMRALNPNDKSFGVK*
Ga0114979_101158403	3300009180	Freshwater Lake	MKDQLKAAGLSYLRAAASCAAALYMSGITDPKTLANAFIAGALAPLMRAMNPSDKTYGVK
Ga0114979_107186992	3300009180	Freshwater Lake	MKDQLLAAGLSYLRAAVSCAAALYMSGITDPKTLANAFIAGALAPLMRAMNPSDKTYGVK
Ga0114974_101273322	3300009183	Freshwater Lake	MGGLKLKTQLMAAGLSYLRAAVSCAAALYMSGITDPKTLANAFVAGLLGPLLRAMNPSDKTFGAK*
Ga0133913_108917142	3300010885	Freshwater Lake	MKEQLMAAGLSYLRAAASCAAALYMSGITDPKTLANAFIAGLLGPLLRAMNPSDNTFGVK
Ga0133913_129273313	3300010885	Freshwater Lake	MGGFKLKTQLQAAGLSYLRAAISCAAALYMSGITDPKILANAFIAGALAPIMRAISPNDKAFGAK*
Ga0138308_1076205	3300010965	Lake Chemocline	MKEQAIAAGLSYLRAAASCAAALYMSGISDPKTLANAFVAGLLGPLLRAMNPSDKTFGAK
Ga0139557_10266661	3300011010	Freshwater	ANRSTTMKEQLQAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLLGPLIRALTPSDKSFGVK*
Ga0153799_10535772	3300012012	Freshwater	MKDQLMAAGLSYLRHAATCAAALYMSGISDPKILANAFLAGLLGPLMRALNSSDKTYGLK
Ga0153801_10261821	3300012017	Freshwater	MGGLKLKTQLMAAGLSYLRHAGTCVAALYMSGISDPKILANAFLAGLLGPVMRGLNTSDKTFGVK*
Ga0157203_10286821	3300012663	Freshwater	MKEQAKAAGLSYLRAAVSCAAALYMSGITDPKTLANAIVAGLLGPLLRAMNPSDNTFGVK
Ga0157210_10258111	3300012665	Freshwater	QLRAFRSKTMKEQAKAAGLSYLRAAVSCAAALYMSGITDWKTLGNAFIAGLLGPLLRALNASDQTFGVK*
Ga0136641_10193991	3300013286	Freshwater	MKDQIKAAGLSYLRAAVSCAAALYMSGITDPQTLANAFVAGALAPLLRALNPSDKTYGVK
Ga0136641_10254024	3300013286	Freshwater	MKEQLQAAGLSYLRAAVSCAAALYMSGITDPKTLANAFIAGALAPLMRAMNPSDKTYGIK
Ga0177922_110916502	3300013372	Freshwater	MKDQLLAAGLSYLRHAGTCVAALYMSGISDPKILANAFLAGLLGPIMRGLNISDKTFGVK
Ga0119960_10678383	3300014811	Aquatic	NPVKEQAKAAGLSYLRAAFSCAAALYMSGITDYKTLGNAFIAGLLGPLLRAMNPSDSTFGVK*
Ga0181350_10490932	3300017716	Freshwater Lake	MGGLKLKTQLIAAGLSYLRHAATCAAGLYMSGISDPKILANAFLAGLLGPLMRALNSSDKTYGVK
Ga0181347_10901563	3300017722	Freshwater Lake	MKKQAIEAGKSYLRHAVACAGALYLSGITDPKILANAFVAGLIGPLLKAITPSDKSFGLGAK
Ga0181362_10074715	3300017723	Freshwater Lake	MKDQLQAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKSFGVK
Ga0181362_10838101	3300017723	Freshwater Lake	MKDQLQAAGLSYLRHAAACAAALYMAGVTDPKTLANAFLAGLIGPLLRALNPSDKSFG
Ga0181365_10080561	3300017736	Freshwater Lake	EKQMKEQVIEAAKSYLRHAVACAGALYLSGISDPKVLANAFVAGLIGPLLRAITPSDKSFGLGAK
Ga0181365_11171303	3300017736	Freshwater Lake	SYLRHAAACAAALYMSGVTDPKTLANAFLAGLLGPLIRALTPSDKSFGVK
Ga0181365_11644052	3300017736	Freshwater Lake	MKDQLQAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLLGPLIRALTPSDKSFGVK
Ga0181344_11717612	3300017754	Freshwater Lake	MGGFKLKKQLQAAGLSYLRAAFSCAAALYMSGITDWKTLGNAFIAGLLGPLLRAMNPSDSTFGVK
Ga0181356_10550344	3300017761	Freshwater Lake	MKEQAIEAGKSYLRHAVACAGALYLSGITDPKVLANAFVAGLIGPLLRAITPSDKSFGLGAK
Ga0181356_11050123	3300017761	Freshwater Lake	MKDQLMAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKSFGVK
Ga0181358_10230145	3300017774	Freshwater Lake	MKDQLMAAGLSYLRHAATCAAALYMSGVTDSKTLANAFLAGLIGPLLRALNPTDKSFGVK
Ga0181358_11909252	3300017774	Freshwater Lake	MGGLKLKTQLMAAGLSYLRHAATCAAALYMSGVTDPKTLANAFLAGLLGPLMRALNTSDKTFGVK
Ga0181357_10163929	3300017777	Freshwater Lake	MKKQAIEAGKSYLRHAVACAGALYLSGITDPKVLANAFVAGLIGPLLKAITPSDKSFGLGAK
Ga0181357_10188815	3300017777	Freshwater Lake	MKEQAIEAGKSYLRHAVACAGALYLSGITDPKVLANAFVAGLIGPLLKAITPSDKSFGLGAK
Ga0181346_12307932	3300017780	Freshwater Lake	MKNQLMAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKSFG
Ga0181348_13092942	3300017784	Freshwater Lake	MKEQLKAAGLSYLRAAISCVGALYLSGITDPKVLANAFLAGLIGPVLKAIAP
Ga0181355_10612153	3300017785	Freshwater Lake	MKEQLTAAGLSYLRHALTCAAALYMSGITDPKVLANAFLAGLIGPLLRASAPNDNTFGLNAKSTTKKGK
Ga0181355_12297882	3300017785	Freshwater Lake	MKDQLQAAGLSYLRHAATCAAALYMSGVTDPKTLANAFLAGLLGPLMRALNTSDKTFGVK
Ga0181359_10456771	3300019784	Freshwater Lake	MKEQLQAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLLGPLIRALTPSDKSFGVK
Ga0181359_10535434	3300019784	Freshwater Lake	MKEQVIEAAKSYLRHAVACAGALYLSGISDPKVLANAFVAGLIGPLLRAITPSDKSFGLGAK
Ga0181359_10594372	3300019784	Freshwater Lake	MKEQLKAAGMSYLRHALTCVAALYMSGIQDPKVLANAFLAGLIGPLLRASAPKDDKFGVGAK
Ga0181359_11380902	3300019784	Freshwater Lake	MKDQLQAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKTFGVK
Ga0181359_11973091	3300019784	Freshwater Lake	MKEQLTAAGLSYLRHAVTCAAVLYMSGITDPKILANAFIAGLVGPLLKAIAPNEKQF
Ga0207193_11543532	3300020048	Freshwater Lake Sediment	MKDQLLAAGVSYLRHAGTCAAALYMSGVTDPKTLANAFIAGLIGPLLRGLNHSDKTFGIK
Ga0211726_109270232	3300020161	Freshwater	MKEQAKAAGLSYLRAAVSCAAALYMSGITDPKTLANAFVAGLLGPLLRAMNPSDKTFGAK
Ga0211726_110086501	3300020161	Freshwater	MKEQAKAAGLSYLRAAVSCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDSTFGVK
Ga0211729_114075043	3300020172	Freshwater	MKEQAIAAGLSYLRAAASCAAALYMSGITDPKTLANAFVAGLIGPILRGLNPSDKNFGVK
Ga0222713_105007522	3300021962	Estuarine Water	MKEQAKAAGLSYLRAAVSCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPNDKAFGTK
Ga0222712_100529706	3300021963	Estuarine Water	MGGLELKTQLQAAGLSYLRAAVSCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDKAFGTK
Ga0181354_11588553	3300022190	Freshwater Lake	MKEQLKAAGMSYLRHALTCVAALYMSGIQDPKVLANAFLAGLIGPLLRAS
Ga0181351_12052562	3300022407	Freshwater Lake	MKDQLMAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPTDKSFGVK
Ga0244775_104469663	3300024346	Estuarine	MKEQLQAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKSFGVK
Ga0244775_109525782	3300024346	Estuarine	MKEQAKAAGLSYLRAAISCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDKAFGTK
Ga0208926_10375342	3300027205	Estuarine	MKEQAKAAGLSYLRAAISCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDPTFGVK
Ga0208133_10711111	3300027631	Estuarine	TTMKEQAKAAGLSYLRAAVSCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDNTFGVK
Ga0209769_11477633	3300027679	Freshwater Lake	MGGLKLKTQLIAAGLSYLRHAATCAAGLYMSGISDPKILANAFLAGLLGPLMRALNS
Ga0209297_10545425	3300027733	Freshwater Lake	VKEQVKAAGLSYLRAAASCAAALYMSGITDPKTLANAFVAGLLGPLLRAMNPADSTFGVK
Ga0209087_101051010	3300027734	Freshwater Lake	MKEQAKAAGLSYLRAAVSCAAALYMSGITDPKTLANAFIAGALAPLMRAMNPSDKTYGVK
Ga0209296_100319714	3300027759	Freshwater Lake	MKEQLMAAGLSYLRHAATCAAALYMSGITDPKILANAFLAGLLGPLMRALNSSDKTYGVK
Ga0209296_13986641	3300027759	Freshwater Lake	MGGLKLKTQLMAAGLSYLRAAVSCAAALYMSGITDPKTLANAFVAGLLGPLLRAMNPSDKTFGAK
Ga0209088_101280202	3300027763	Freshwater Lake	MGGLKLKTQIQTAGLSYLRAALSCAAALYMSGITDPKTLANAFIAGALAPLMRALNPNDKSFGVK
Ga0209246_103388451	3300027785	Freshwater Lake	LQAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLLGPLIRALTPSDKSFGVK
Ga0209246_103536451	3300027785	Freshwater Lake	MKDQLMAAGLSYLRHAAACAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKTFGVK
Ga0209107_100098946	3300027797	Freshwater And Sediment	MKEQAIAAGLSYLRAAASCAAALYMSGITDPKTLANAFIAGLIGPLLRGLNTSDKTFGVK
Ga0209107_100322096	3300027797	Freshwater And Sediment	MGGLKLKTQLMAAGLSYLRHAATCAAALYMSGITDPKTLANAFLAGLIGPLMRALNTSDKTFGLK
Ga0209354_100714092	3300027808	Freshwater Lake	MKDQLMAAGLSYLRHAATCAAALYMSGVTDPKTLANAFLAGLIGPLLRALNPSDKSFGVK
Ga0209298_100453436	3300027973	Freshwater Lake	SQLRAFRSKTMKEQAKAAGLSYLRAAFSCAAALYMSGITDPKTLANAFVAGLLGPLLRAMNRSDKTFGAK
Ga0315274_119851432	3300031999	Sediment	MKEQLQAAGLSYLRAAVSCAAALYMSGITDPKTLANAFIAGALAPLMRAMNPSDKTYGVK
Ga0315905_114469982	3300032092	Freshwater	MKEQLKAAGLSYLRHALTCVAALYMSGIQDPKVLANAFLAGLIGPLLRASAPNDNKFGLGAK
Ga0334980_0184650_591_773	3300033816	Freshwater	MKEQAKAAGLSYLRAAFSCAAALYMSGITDYKTLGNAFIAGLLGPLLRAMNPSDSTFGVK
Ga0334981_0067551_380_562	3300033980	Freshwater	VKEQAKAAGLSYLRAAFSCAAALYMSGITDWKTLGNAFIAGLLGPLLRAMNPSDNTFGVK
Ga0334982_0139838_951_1133	3300033981	Freshwater	MKDQLLAAGLSYLRHAGTCAAALYMSGVTDPKILANAFVAGLLGPLMRGLNTSDKTFGVK
Ga0335003_0262498_557_739	3300033995	Freshwater	MKEQVMAAGLSYLRHAATCAAALYMSGITDPKTLANAFLAGLIGPLLRALNSSDKTYGVK
Ga0334979_0037158_2237_2419	3300033996	Freshwater	MKEQAKAAGLSYLRAAISCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDNTFGVK
Ga0334986_0029192_1418_1600	3300034012	Freshwater	MKEQAIAAGLSYLRAAASCAAALYMSGISDPKTLANAFIAGLIGPLLRGLNPSDKNFGVK
Ga0334986_0041444_378_560	3300034012	Freshwater	MKDQLLAAGLSYLRHAGTCAAALYMSGVTDPKILANSFIAGLIGPLLRGLNHSDKTFGIK
Ga0334986_0284279_629_811	3300034012	Freshwater	MKEQAKADGLSYLRAAFSCAAALYMSGITDWKTLGNAFIAGLLGPLLRAMNPSDTTFGVK
Ga0334986_0433316_268_450	3300034012	Freshwater	MKEQAKAAGLSYLRAAVSCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDPTFGVK
Ga0334987_0117999_337_519	3300034061	Freshwater	MKEQAIAAGLSYLRAAASCAAALYMSGITDPKTLANAFVAGLIGPLLRGLNPSDKNFGVK
Ga0334987_0255181_859_1041	3300034061	Freshwater	MKEQAIAAGLSYLRAAASCAAALYMSGITDPKTLANAFVAGLIGPLLRGLNTSDKTFGVK
Ga0334995_0238095_23_205	3300034062	Freshwater	MKEQAIAAGLSYLRAAVSCAAALYMSGITDPKTLGNAFIAGLIGPLLRALNTSDKNFGVK
Ga0335031_0004960_3020_3202	3300034104	Freshwater	MKDQLLAAGLSYLRHAGTCAAALYMSGVSDPKILANSFIAGLIGPLLRGLNHSDKTFGIK
Ga0335036_0183628_1195_1377	3300034106	Freshwater	MKEQVMAAGLSYLRAAISCAAALYMSGITDPKTLANAFVAGLLGPLMRAMNPSDNTFGVK
Ga0335036_0361815_494_676	3300034106	Freshwater	MKEQAIAAGLSYLRAAASCAAALYMSGISDPKTLANAFVAGLIGPLLRGLNPSDKNFGIK
Ga0335066_0465568_1_153	3300034112	Freshwater	MKEQAKAAGLSYLRAAISCAAALYMSGITDPKTLANAFVAGLLGPLMRAMN
Ga0335068_0187748_181_363	3300034116	Freshwater	MKEQAIAAGLSYLRAAVSCAAALYMSGITDYKTLGNAFIAGLLGPLLRAMNPSDSTFGVK
Ga0335017_0003718_7699_7881	3300034167	Freshwater	MKEQAIAAGLSYLRHAGTCVAALYMSGISDPKILANAFLAGLLGPIMRGLNTSDKTFGVK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085231

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences