Metagenome Family F085219

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F085219
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	63 residues
Representative Sequence	MQLQVGDRLADETGEWEITVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERINVKRA
Number of Associated Samples	92
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.32 %
% of genes near scaffold ends (potentially truncated)	42.34 %
% of genes from short scaffolds (< 2000 bps)	80.18 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.468 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.036 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.441 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 32.95% Coil/Unstructured: 67.05%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00072	Response_reg	9.01
PF04392	ABC_sub_bind	8.11
PF09972	DUF2207	5.41
PF00589	Phage_integrase	2.70
PF00561	Abhydrolase_1	0.90
PF16657	Malt_amylase_C	0.90
PF01370	Epimerase	0.90
PF02518	HATPase_c	0.90
PF14534	DUF4440	0.90
PF00691	OmpA	0.90
PF13274	DUF4065	0.90
PF00296	Bac_luciferase	0.90
PF02417	Chromate_transp	0.90
PF13546	DDE_5	0.90
PF14346	DUF4398	0.90
PF01936	NYN	0.90
PF01738	DLH	0.90
PF05721	PhyH	0.90
PF11578	DUF3237	0.90
PF13432	TPR_16	0.90
PF04851	ResIII	0.90
PF02567	PhzC-PhzF	0.90
PF13091	PLDc_2	0.90
PF00106	adh_short	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	8.11
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.90
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.90
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.90
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.90
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.47 %
Unclassified	root	N/A	31.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.47 %
Unclassified	root	N/A	31.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.47 %
Unclassified	root	N/A	31.53 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	34.23 %
Unclassified	root	N/A	31.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	34.23 %
Unclassified	root	N/A	31.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	34.23 %
Unclassified	root	N/A	31.53 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.90 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	31.53 %
Unclassified	root	N/A	31.53 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %
Actinobacteria bacterium 13_1_40CM_4_65_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	0.90 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	31.53 %
Unclassified	root	N/A	31.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
Hylemonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella	0.90 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.90 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %
Actinobacteria bacterium 13_1_40CM_4_65_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	31.53 %
Unclassified	root	N/A	31.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.90 %
Desulfatibacillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum	0.90 %
Hylemonella gracilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella → Hylemonella gracilis	0.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %
Actinobacteria bacterium 13_1_40CM_4_65_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	31.53 %
Unclassified	root	N/A	31.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
Variovorax sp. KK3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. KK3	0.90 %
Desulfatibacillum aliphaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum aliphaticivorans	0.90 %
Hylemonella gracilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella → Hylemonella gracilis	0.90 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %
Actinobacteria bacterium 13_1_40CM_4_65_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005178\|Ga0066688_10796006	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300005179\|Ga0066684_10239610	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300005179\|Ga0066684_11075493	Not Available	515	Open in IMG/M
3300005180\|Ga0066685_10000466	All Organisms → cellular organisms → Bacteria	14221	Open in IMG/M
3300005186\|Ga0066676_10833849	Not Available	622	Open in IMG/M
3300005186\|Ga0066676_11118535	Not Available	518	Open in IMG/M
3300005446\|Ga0066686_10302156	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1088	Open in IMG/M
3300005536\|Ga0070697_100068156	All Organisms → cellular organisms → Bacteria	2912	Open in IMG/M
3300005555\|Ga0066692_10267855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1080	Open in IMG/M
3300005568\|Ga0066703_10622460	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300005586\|Ga0066691_10382888	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300005586\|Ga0066691_10754579	Not Available	574	Open in IMG/M
3300005713\|Ga0066905_100834936	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum aliphaticivorans	801	Open in IMG/M
3300005841\|Ga0068863_100413444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. KK3	1321	Open in IMG/M
3300007076\|Ga0075435_100518027	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300007255\|Ga0099791_10068376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hylemonella → Hylemonella gracilis	1608	Open in IMG/M
3300007255\|Ga0099791_10121226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1213	Open in IMG/M
3300007265\|Ga0099794_10006319	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4787	Open in IMG/M
3300007265\|Ga0099794_10201458	Not Available	1019	Open in IMG/M
3300009012\|Ga0066710_100322346	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300009038\|Ga0099829_10427470	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300009038\|Ga0099829_11460306	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300009088\|Ga0099830_10899058	Not Available	732	Open in IMG/M
3300009090\|Ga0099827_10151578	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300009553\|Ga0105249_13468905	Not Available	508	Open in IMG/M
3300009813\|Ga0105057_1082752	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300009817\|Ga0105062_1136803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300009837\|Ga0105058_1164260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300010029\|Ga0105074_1091415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	569	Open in IMG/M
3300010029\|Ga0105074_1109635	Not Available	528	Open in IMG/M
3300010047\|Ga0126382_10705301	Not Available	847	Open in IMG/M
3300010047\|Ga0126382_10785728	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	810	Open in IMG/M
3300010304\|Ga0134088_10119779	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1245	Open in IMG/M
3300010358\|Ga0126370_10116249	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1886	Open in IMG/M
3300010398\|Ga0126383_11401031	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300010400\|Ga0134122_11783818	Not Available	646	Open in IMG/M
3300011270\|Ga0137391_10968327	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	693	Open in IMG/M
3300011271\|Ga0137393_10789903	Not Available	812	Open in IMG/M
3300012096\|Ga0137389_10026026	All Organisms → cellular organisms → Bacteria	4184	Open in IMG/M
3300012096\|Ga0137389_10624725	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300012202\|Ga0137363_10610558	All Organisms → cellular organisms → Bacteria → Acidobacteria	921	Open in IMG/M
3300012205\|Ga0137362_10788312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300012206\|Ga0137380_11250372	Not Available	627	Open in IMG/M
3300012207\|Ga0137381_10825664	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	803	Open in IMG/M
3300012349\|Ga0137387_10386155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1015	Open in IMG/M
3300012351\|Ga0137386_10463005	Not Available	913	Open in IMG/M
3300012360\|Ga0137375_10326032	Not Available	1375	Open in IMG/M
3300012361\|Ga0137360_10096594	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2251	Open in IMG/M
3300012362\|Ga0137361_10155391	Not Available	2048	Open in IMG/M
3300012362\|Ga0137361_10879768	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012362\|Ga0137361_10899879	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	803	Open in IMG/M
3300012363\|Ga0137390_10102071	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300012363\|Ga0137390_10665071	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012506\|Ga0157324_1042311	Not Available	562	Open in IMG/M
3300012532\|Ga0137373_10755759	Not Available	721	Open in IMG/M
3300012582\|Ga0137358_10360044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300012922\|Ga0137394_10923816	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	728	Open in IMG/M
3300012927\|Ga0137416_10660409	Not Available	915	Open in IMG/M
3300012929\|Ga0137404_10006951	All Organisms → cellular organisms → Bacteria	7702	Open in IMG/M
3300012929\|Ga0137404_10347714	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300012944\|Ga0137410_11155241	Not Available	665	Open in IMG/M
3300015241\|Ga0137418_10315610	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300015264\|Ga0137403_10319451	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300015358\|Ga0134089_10332362	Not Available	637	Open in IMG/M
3300016270\|Ga0182036_10184526	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300016294\|Ga0182041_11848825	Not Available	560	Open in IMG/M
3300016422\|Ga0182039_10051832	All Organisms → cellular organisms → Bacteria	2799	Open in IMG/M
3300017656\|Ga0134112_10185355	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	810	Open in IMG/M
3300017659\|Ga0134083_10429140	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300017792\|Ga0163161_10511995	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300017997\|Ga0184610_1000889	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6724	Open in IMG/M
3300018029\|Ga0187787_10473471	Not Available	509	Open in IMG/M
3300018052\|Ga0184638_1040890	Not Available	1683	Open in IMG/M
3300018052\|Ga0184638_1041850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1664	Open in IMG/M
3300018053\|Ga0184626_10058404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1619	Open in IMG/M
3300018056\|Ga0184623_10003011	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7223	Open in IMG/M
3300018056\|Ga0184623_10027939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2531	Open in IMG/M
3300018056\|Ga0184623_10045475	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1998	Open in IMG/M
3300018056\|Ga0184623_10147642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1087	Open in IMG/M
3300018076\|Ga0184609_10478967	Not Available	569	Open in IMG/M
3300018468\|Ga0066662_12177152	Not Available	582	Open in IMG/M
3300018482\|Ga0066669_10531424	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1022	Open in IMG/M
3300019789\|Ga0137408_1204723	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300021073\|Ga0210378_10225548	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	712	Open in IMG/M
3300024279\|Ga0247692_1053848	Not Available	625	Open in IMG/M
3300024283\|Ga0247670_1107823	Not Available	516	Open in IMG/M
3300024347\|Ga0179591_1099518	All Organisms → cellular organisms → Bacteria	2444	Open in IMG/M
3300026296\|Ga0209235_1120682	Not Available	1100	Open in IMG/M
3300026296\|Ga0209235_1243905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300026332\|Ga0209803_1151441	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	897	Open in IMG/M
3300026335\|Ga0209804_1015059	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4105	Open in IMG/M
3300026537\|Ga0209157_1058842	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1988	Open in IMG/M
3300027273\|Ga0209886_1001868	All Organisms → cellular organisms → Bacteria	2747	Open in IMG/M
3300027384\|Ga0209854_1020253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1076	Open in IMG/M
3300027511\|Ga0209843_1045043	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300027561\|Ga0209887_1009483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2576	Open in IMG/M
3300027577\|Ga0209874_1017896	Not Available	2033	Open in IMG/M
3300027655\|Ga0209388_1035933	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1424	Open in IMG/M
3300027655\|Ga0209388_1068911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1019	Open in IMG/M
3300027846\|Ga0209180_10336033	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	862	Open in IMG/M
3300027875\|Ga0209283_10004907	All Organisms → cellular organisms → Bacteria	7671	Open in IMG/M
3300027957\|Ga0209857_1037819	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	873	Open in IMG/M
3300028814\|Ga0307302_10116018	Not Available	1285	Open in IMG/M
3300031890\|Ga0306925_10025328	All Organisms → cellular organisms → Bacteria	5990	Open in IMG/M
3300031912\|Ga0306921_10003698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	15540	Open in IMG/M
3300031913\|Ga0310891_10157101	Not Available	741	Open in IMG/M
3300032075\|Ga0310890_10352816	Not Available	1076	Open in IMG/M
3300032174\|Ga0307470_10468962	Not Available	910	Open in IMG/M
3300032205\|Ga0307472_100134141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	1778	Open in IMG/M
3300034176\|Ga0364931_0314941	Not Available	520	Open in IMG/M
3300034417\|Ga0364941_138432	Not Available	607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.50%
Host-Associated	Host-Associated	4.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.49%
Aquatic	Environmental → Aquatic	9.01%
Plants	Host-Associated → Plants	4.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.68%
Sediment	Environmental → Aquatic → Sediment	8.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Floodplain	Environmental → Terrestrial → Floodplain	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.80%
Freshwater	Environmental → Aquatic → Freshwater	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.07%
Sand	Environmental → Terrestrial → Soil → Sand	9.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.70%
Loam	Environmental → Terrestrial → Soil → Loam	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.12%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.61%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	9.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066688_107960062	3300005178	Soil	MQLQIGDQLSDETGEWEVVNRPRTTAGGKVAHVRVRRVDQPALVEERTWGAHERIEGTRG
Ga0066684_102396101	3300005179	Soil	MQLQIGDRLSDETGEWEVVNRPHTTAGGKTAHARVRRVDQPAVIEERTWGAHERVVVKRG
Ga0066684_110754931	3300005179	Soil	MQLQIGDRLSDETGEWEVVNRPRTTAGGKVAHVLVRRVDQPALVEERTWGAHERVEVTRG
Ga0066685_1000046614	3300005180	Soil	MQLQIGDRLSDETGEWEVVNRPRTTAGGKVAHVRVRRVDQPALVEERTWGAHERIEGARG
Ga0066676_108338491	3300005186	Soil	MQLQVGDRLIDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEERTWGAHERIAVK
Ga0066676_111185351	3300005186	Soil	MQLQIGDQLSDETGEWEVVNRPRTTAGGKVAHVRVRRVDQPALVEERTWGAHERIEGARG
Ga0066686_103021564	3300005446	Soil	DETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERINVRRA*
Ga0070697_1000681563	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MQLKVGDRLVDETGEWEVIRRPYTAAGGKIAHAHVRRVAQPAVNEFRTWGALERISVKRA
Ga0066692_102678552	3300005555	Soil	VELQVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERIAVRRATAEEGKR*
Ga0066703_106224601	3300005568	Soil	MQLQIGDRLSDETGEWEVVNRPRTTAGGKVAHVRVRRVDQPALVEERTWGAHERIEVTRG
Ga0066691_103828884	3300005586	Soil	RISDETGEWEVANRPHTTAGGKIAHARVRRVDQPAVVEERTWGAHEHVEVKRG*
Ga0066691_107545793	3300005586	Soil	DETGEWEVVNRPHTTAGGKTAHARVRRVDQPAVIEERTWGAHERVVVKRA*
Ga0066905_1008349361	3300005713	Tropical Forest Soil	ISDETGEWEVANRPHTTAGGKVAHVRVRRVDQPAVVEERTWGAHERVEVKRV*
Ga0068863_1004134441	3300005841	Switchgrass Rhizosphere	ETGEWEVANRPHTTAGGKIAHARVRRVDQPAVVEERTWGAHERVEVKRG*
Ga0075435_1005180271	3300007076	Populus Rhizosphere	RASSSSSTTRILPMQLQIGDRLSDETGEWEVVNRPHTTAGGKTAHVRVRRVDQPAVIEERTWGAHERVVVKRG*
Ga0099791_100683764	3300007255	Vadose Zone Soil	MQLKVGDRLIDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERIAVRRATAEE
Ga0099791_101212262	3300007255	Vadose Zone Soil	MQLKVGDRLIDETGEWEVTVQPYTSPGGKNVHTRVRRMDQPATAEDRTWGTHERINVRRVTTEEGKR*
Ga0099794_100063195	3300007265	Vadose Zone Soil	MQLKVGDRLIDETREWEVTVQPYTSPGGKNVHTRVRRMDQPATAEDRTWGTHERINVRRV
Ga0099794_102014582	3300007265	Vadose Zone Soil	MQLKVGDRLIDETGEWEVTVRPYTSGGKNVHARVRRVDQPATAEERTWSAHERISVKRATAEEGKR*
Ga0066710_1003223463	3300009012	Grasslands Soil	MGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEERTWGAHERIAVRRG
Ga0099829_104274702	3300009038	Vadose Zone Soil	VCELGDRIADETGEWEVTVRPYISPGGKNVHARVRRLDQPATAEDRTWGAHELINVKRTTAEKGKR*
Ga0099829_114603062	3300009038	Vadose Zone Soil	DRLVDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEDRTWGAHERIAVKRATAEEGKR*
Ga0099830_108990581	3300009088	Vadose Zone Soil	MQLQVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEDRTWGAHERIAVKRATAEEGKR*
Ga0099827_101515783	3300009090	Vadose Zone Soil	MIRVLPMQLQVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEERTWGAHERIAVRRG*
Ga0105249_134689053	3300009553	Switchgrass Rhizosphere	APATMRILPMQLQVGDRLSDETGEWEVANRPHTTAGGKIAHARVRRVDQPAVVEERTWGAHERVEVKRG*
Ga0105057_10827521	3300009813	Groundwater Sand	VGHRFSDESAEWEIASRPHTTGGGKIVHARVRRVDQPAVMEDRTWGAHERISVKRT*
Ga0105062_11368032	3300009817	Groundwater Sand	LPMQLQVGHRFSDESGEWEIASRPHTTGGGKIVHARVRRVDQPAVMEDRTWGAHERISVKRT*
Ga0105058_11642601	3300009837	Groundwater Sand	MQLQVGHRFSDESGEWEIASHPHTTGGGKIVHARVRRVDQPAVMEDRTWGAHERIS
Ga0105074_10914152	3300010029	Groundwater Sand	ADETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEVRTWGAHERIAVRRATAEEGKR*
Ga0105074_11096351	3300010029	Groundwater Sand	MQLKVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEDRTWGAHERIGVRRATAEEGTR*
Ga0126382_107053012	3300010047	Tropical Forest Soil	MQLKIGDRIADETGEWEVAARPHTTAGGKVAHVRVRRVDQPAVVEERTWGAHERVEVKRA
Ga0126382_107857282	3300010047	Tropical Forest Soil	MQLQIGDRLAEETGEWEVANRPHTTTGGKVAHVRVRRVDQPTVVEERTWGAHERIEVKRG
Ga0134088_101197793	3300010304	Grasslands Soil	MQLKVGDRFVDETGEWEVTVRPYISPGGKNVHARVRRMDQPATAEDRTWGAHERINVKRTPAEEGNR*
Ga0126370_101162493	3300010358	Tropical Forest Soil	MQLKIGDRISDETGEWEVANRPHTTAGGKVAHVLVRRVDQPAVVEERTWGAHERVEVKRA
Ga0126383_114010312	3300010398	Tropical Forest Soil	MQLKAGDRITDETGEWEVANRPHTTAGGKVVHVRVRRVDQPAVVEERTWGAHERVEVKRA
Ga0134122_117838182	3300010400	Terrestrial Soil	MQLQVGDRLSDETGEWEVANRPHTTAGGKIAHARVRRVDQPAVVEERTWGAHERVEVKRG
Ga0137391_109683273	3300011270	Vadose Zone Soil	MIRVLPMQLKVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEERTWGAHERIAVRR
Ga0137393_107899032	3300011271	Vadose Zone Soil	MQLKVGDRLVDETVEWEFTVRPYTSPGGKNVHARVRRMDQPATAEDRTWGAHERINVKRATTEEGKR*
Ga0137389_100260263	3300012096	Vadose Zone Soil	MQLKVGDWLADETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEDRTWGAHERINVKRP
Ga0137389_106247252	3300012096	Vadose Zone Soil	VCELGDRIADETGEWEVTIRPYTSPGGKNVHARVRRLDQPATAEDRTWGAHERINVKRTTAEKGKR*
Ga0137363_106105581	3300012202	Vadose Zone Soil	RISDETGEWEVANRPHTTAGGKIAHARVRRVDQPAVVEERTWGAHERVEVKRG*
Ga0137362_107883123	3300012205	Vadose Zone Soil	SDETGEWEVVNRPHTTAGGKIAHVRVRKVDQPALVEERTWGAHERVEVRRG*
Ga0137380_112503722	3300012206	Vadose Zone Soil	MQLQVGDRITDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEDRTWGAHERINVKRA
Ga0137381_108256641	3300012207	Vadose Zone Soil	SSTARVLPMQLQVGDRLIDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWSAHERISVKRATAE*
Ga0137387_103861553	3300012349	Vadose Zone Soil	MQHQVGDRRIDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWSAHERISVKRATAE*
Ga0137386_104630052	3300012351	Vadose Zone Soil	MQLQVGDRLIDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWSAHERISVKRATAE*
Ga0137375_103260321	3300012360	Vadose Zone Soil	TTRVLPMQLKVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEDRTWGAHERIAMRRG*
Ga0137360_100965943	3300012361	Vadose Zone Soil	MIRVLPMELQVGDRLTDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEERTWGARERIAVRRGWQHDF*
Ga0137361_101553911	3300012362	Vadose Zone Soil	MQLKVGDRLADETGEWEVTVRPYTSPGGRNVHARVRKMDQPATAEDRTWGAHERINVRR
Ga0137361_108797682	3300012362	Vadose Zone Soil	MELQVGDRIADETGEWEVTVRPYTSPGGKNVHARVRRLDQPATAEERTWGAHERINVRRA
Ga0137361_108998793	3300012362	Vadose Zone Soil	RVLPMQLQVGDRFIDETGEWEVTVRPYTSPGGKNVYARVRRVDQPATAEERTWGAHERIAVRRA*
Ga0137390_101020715	3300012363	Vadose Zone Soil	MDLQVGDRIADETGEWEVTVRPYISPGGKNVHARVRRLDQPATAEDRTWGAHERINVKRTTAEEGKR*
Ga0137390_106650711	3300012363	Vadose Zone Soil	SRRLFVDETGEWEVVGRPYSTAGGKIAHARVRRVDQPASAAERTWGAHERIAVRR*
Ga0157324_10423111	3300012506	Arabidopsis Rhizosphere	IGDRISDETGEWEVVGRPYTTAGGKTAHVRVRRVDQPAVVEERSWGAHEHVAVKRA*
Ga0137373_107557591	3300012532	Vadose Zone Soil	MQLKVGDRLVDETGEWEVTVQPYTSPGGKNVHARVPRMDQPATAEERTWGAHDHISVKRATSEEGKR*
Ga0137358_103600442	3300012582	Vadose Zone Soil	MEDYVSSSTTRILPMQLQIGDRLSDETGEWEVVNRPHTTAGGKTAHARVRRVDQPAVIEERTWGAHERVVVKRA*
Ga0137394_109238162	3300012922	Vadose Zone Soil	MQLQIGDRLSDETGEWEVVNRPHTTAGGKVAHARVRRVDQPAVVEERTWGAHERVEVKRG
Ga0137416_106604093	3300012927	Vadose Zone Soil	MEDYVSSSTTRILPMQLQIGDRLLDETGEWKVVNRPHTTAGGKTAHARVRRVDQPAVIEERTWGAHERVVVKRA*
Ga0137404_100069519	3300012929	Vadose Zone Soil	MARMAKPDTRAPSSSSSTRILPMQLQIGDRLSDETGEWEVVNRPHTTAGGKTAHVRVRRVDQPAVVEERTWGAHERVTVKRP*
Ga0137404_103477144	3300012929	Vadose Zone Soil	MQLQVGDRLIDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERVSVKRTTAEEGKR*
Ga0137410_111552411	3300012944	Vadose Zone Soil	MELQVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERIAVRRATSEEDK*
Ga0137418_103156101	3300015241	Vadose Zone Soil	MEDYVSSSTTRILPMQLQIGDRLLDEPGEWEVVNRPHTTAGGKTAHARVRRVDQPAVIEERTLGAHERVV
Ga0137403_103194512	3300015264	Vadose Zone Soil	MQLQVGDRLIDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERVSVKRATAEEGKR*
Ga0134089_103323622	3300015358	Grasslands Soil	MQLMVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERIAVRRATSEEGKR*
Ga0182036_101845264	3300016270	Soil	AAPPATRVLPMQLKIGDRISDETGEWEVANRPHTTAGGKVAHVRVRRVDQPAVVEERTWGAHERVEVKRA
Ga0182041_118488252	3300016294	Soil	QLKIGDRISDETGEWEVANRPHTTAGGKVAHVRVRRVDQPAVVEERTWGAHERVEVKRA
Ga0182039_100518322	3300016422	Soil	MQLKIGDRISDETGEWEVANRPHTTAGGKVAHVRVRRMDQPAVVEERTWGAHERVEVKRA
Ga0134112_101853553	3300017656	Grasslands Soil	VLPMQLKVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERIAVRRATSEEGKR
Ga0134083_104291401	3300017659	Grasslands Soil	MQLKVGGRLVDATGEWEVTVRPYTSPGGKNVHARVRRVDQPATADERTWGAHERINVKRA
Ga0163161_105119951	3300017792	Switchgrass Rhizosphere	ASSAPATMRILPMQLQVGDRLSDETGEWEVANRPHTTAGGKIAHARVRRVDQPAVVEERTWGAHERVEVKRG
Ga0184610_100088911	3300017997	Groundwater Sediment	MQLKVGDRLIDETGEWEVTVWPYTSPGGKNVHARVRRVDQPAIAEERTWGAHERISVKRR
Ga0187787_104734712	3300018029	Tropical Peatland	MQLQVGDRISDETGEWEVANRPHTTAGGKIAHARLRKVDQPAVIEERTWGAHERVEVKRG
Ga0184638_10408904	3300018052	Groundwater Sediment	MQLQVGDRLIDETGEWEVTVQPYTSPGGKNVHARVRRMDQPATAEDRTWGAHERIAVRRATAEEGK
Ga0184638_10418501	3300018052	Groundwater Sediment	RILPMQLRIGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERINVKRA
Ga0184626_100584042	3300018053	Groundwater Sediment	MQLKVGDRLADETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERIAVRRATPEEGKR
Ga0184623_1000301113	3300018056	Groundwater Sediment	MELWIGDRLIDETGEWEVIGQPYTSGGGKSAHARIQRVDQPASATDRTWGAHERIAVRRS
Ga0184623_100279391	3300018056	Groundwater Sediment	DRLIDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEERTWGARERISVKRA
Ga0184623_100454753	3300018056	Groundwater Sediment	MELQVGDRFVDETGEWEITVRPYTSPGGKNVHARVRRMDQPATAEERTWGAHERIAVRRA
Ga0184623_101476421	3300018056	Groundwater Sediment	ADETGEWEVTVRPYTSPGGKNVHARVRKMDQPATAEERTWGAHERIAVRRATAEEGKR
Ga0184609_104789672	3300018076	Groundwater Sediment	SSSTTRVLPMQLKVGDRLADETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEERTWGAHERISVKRATTKEGKR
Ga0066662_121771521	3300018468	Grasslands Soil	TTRILPMQLQIGDRLSDETGEWEVVNRPHTTAGGKTAHARVRRVDQPAVVEERTWGAHERVVVKRG
Ga0066669_105314242	3300018482	Grasslands Soil	MQLQIGDRLSDETGEWEVVNRPRTTAGGKVAHVRVRRVDQPALVEERTWGAHERIEGTRG
Ga0137408_12047234	3300019789	Vadose Zone Soil	MQLQVGDRLIDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERVSVKRTTAEEGKR
Ga0210378_102255481	3300021073	Groundwater Sediment	IADETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEERTWGAHERINVRRA
Ga0247692_10538481	3300024279	Soil	PMQLQVGDRITDETGEWEVANRPHTTAGGKIAHVRVRRVDQPAVVEDRTWGAHERVEVKR
Ga0247670_11078232	3300024283	Soil	GDRITDETGEWEVANRPHTTAGGKIAHVRVRRVDQPAVVEDRTWGAHERVEVKRG
Ga0179591_10995182	3300024347	Vadose Zone Soil	MQLQVGDRISDETGEWEVANRPHTTAGGKIAHARVRRVDQPAVLEERTWGAHERVEVKRG
Ga0209235_11206822	3300026296	Grasslands Soil	MQLKVGDRLIDETGEWEVTVQPYTSPGGKNVHTRVRRMDQPATAEDRTWGTHERINVRRVTTEEGKR
Ga0209235_12439051	3300026296	Grasslands Soil	VELQVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERIAVRRATAEEGKR
Ga0209803_11514411	3300026332	Soil	QLQIGDRLSDETGEWEVVNRPHTTAGGKTAHARVRRVDQPAVIEERTWGAHERVVVKRG
Ga0209804_10150591	3300026335	Soil	SSSSTTRILPMQLQIGDRLSDETGEWEVVNRPHTTAGGKTAHARVRRVDQPAVIEERTWGAHERVVVKRG
Ga0209157_10588424	3300026537	Soil	MQLQVGDRLADETGEWEITVRPYTSPGGKNVHARVRRVDQPATAEERTWGAHERINVKRA
Ga0209886_10018682	3300027273	Groundwater Sand	MQLQVGHRFSDESAEWEIASRPHTTGGGKIVHARVRRVDQPAVMEDRTWGAHERISVKRT
Ga0209854_10202532	3300027384	Groundwater Sand	MQLQVGHRFSDESGEWEIASRPHTTGGGKIVHARVRRVDQPAVMEDRTWGAHERISVKRT
Ga0209843_10450431	3300027511	Groundwater Sand	PAETRVLPMHLKVGDRLVDETGEWEVTVRPYTFPGGKNVHARVRRVDQPATAEDRTWGAHERIAVGR
Ga0209887_10094834	3300027561	Groundwater Sand	MQLQVGHRFSDESGEWEIASHPHTTGGGKIVHARVRRVDQPAVMEDRTWGAHERISVKRT
Ga0209874_10178963	3300027577	Groundwater Sand	MQLKVGDRLVDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEDRTWGAHEKVSVKRATEEGKR
Ga0209388_10359334	3300027655	Vadose Zone Soil	RVLPMQLKVGDRLIDETGEWEVTVQPYTSPGGKNVHTRVRRMDQPATAEDRTWGTHERINVRRVTTEEGKR
Ga0209388_10689112	3300027655	Vadose Zone Soil	MQLQIGDRLSDETGDWEVINRPHTTAGGKVAHVRVRRVDQPALIEERTWGAHERVEVRRG
Ga0209180_103360332	3300027846	Vadose Zone Soil	MQLQVGDRFADETGEWEVTVRPYTSPGGKTVHARVRRIDQPATAEERTWGAPERIAVRRATAEEGKR
Ga0209283_1000490711	3300027875	Vadose Zone Soil	MQLQVGDRLVDETGEWEVTVRPYTSPGGKNVHARIRRMDQPATAEDRTWGAHERISVKRATAEEAK
Ga0209857_10378191	3300027957	Groundwater Sand	PDAPASVRVLPMQLQVGHRFSDESGEWEIASRPHTTGGGKIVHARVRRVDQPAVMEDRTWGAHERISVKRT
Ga0307302_101160182	3300028814	Soil	MPPPLPPGTTRVLPMQLQVGDRITDETGEWEVTVRPYTSPGGKNVHARVRRMDQPATAEDRTWGAHERINVKRA
Ga0306925_100253282	3300031890	Soil	MQLKIGDRISDETGEWEVANRPHTTAGGKVAHVRVRRVDQPAVVEERTWGAHERVEVKRA
Ga0306921_1000369822	3300031912	Soil	TRVLPMQLKIGDRISDETGEWEVANRPHTTAGGKVAHVRVRRMDQPAVVEERTWGAHERVEVKRA
Ga0310891_101571011	3300031913	Soil	QIGDRISDETGEWEVVSRPYTTAGGKTAHVRVRRVDQPAVVEERSWGAHEHVAVKRA
Ga0310890_103528161	3300032075	Soil	LPMQLQIGDRISDETGEWEVVSRPYTTAGGKTAHVRVRRVDQPAVVEERSWGAHEHVAVKRA
Ga0307470_104689622	3300032174	Hardwood Forest Soil	MQLQVGDRISDETGEWEVANRPHTTAGGKIAHARVRRVDQPAVVEERTWGAHERVEVKRG
Ga0307472_1001341413	3300032205	Hardwood Forest Soil	SPASATRILPMQLQIGDRISDETGEWEVVGRPHTTAGGKTAHVRVRRVDQPAVVEERSWGAHERVAVKRA
Ga0364931_0314941_160_363	3300034176	Sediment	MQLQIGDRLVDETGEWEVTVRPYTSPGGKNVHARVRKMDQPATAEDRTWGAHERIAVRRATSEEGKR
Ga0364941_138432_32_214	3300034417	Sediment	MQLQIGDRLSDETGDWEVVNRPHTTAGGKTAHVRVRRVDQPALVEDRTWGAHERVEVTRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085219

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences