Metagenome / Metatranscriptome Family F085149

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085149
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	61 residues
Representative Sequence	MQKVYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNVEEYEVNA
Number of Associated Samples	86
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.59 %
% of genes near scaffold ends (potentially truncated)	18.02 %
% of genes from short scaffolds (< 2000 bps)	81.98 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (48.649 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (27.027 % of family members)
Environment Ontology (ENVO)	Unclassified (78.378 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.775 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.10% β-sheet: 28.09% Coil/Unstructured: 52.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.128.1.5: GatB/GatE catalytic domain-like	d1zq1c3	1zq1	0.70349
d.58.5.0: automated matches	d6mm2a1	6mm2	0.684
d.58.4.12: Hypothetical protein YdhR	d2hiqa_	2hiq	0.67102
d.58.29.0: automated matches	d4p2fa_	4p2f	0.66801
d.128.1.0: automated matches	d2bvca2	2bvc	0.66145

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF12779	WXXGXW	4.50
PF00924	MS_channel	1.80
PF01541	GIY-YIG	0.90
PF00004	AAA	0.90
PF07750	GcrA	0.90
PF13489	Methyltransf_23	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.80
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.80
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.35 %
Unclassified	root	N/A	48.65 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	49.55 %
Unclassified	root	N/A	48.65 %
cellular organisms	root	All Organisms → cellular organisms	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.04 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	12.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.04 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	12.61 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.04 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	12.61 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.04 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12.61 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.04 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	12.61 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	0.90 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.04 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.61 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.90 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.04 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.61 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	0.90 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.04 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12.61 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	0.90 %
Klebsiella pneumoniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000206\|M3P_c10081814	Not Available	511	Open in IMG/M
3300000756\|JGI12421J11937_10041156	Not Available	1570	Open in IMG/M
3300002835\|B570J40625_100345408	All Organisms → Viruses → Predicted Viral	1478	Open in IMG/M
3300002835\|B570J40625_101549278	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	543	Open in IMG/M
3300003277\|JGI25908J49247_10033403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1438	Open in IMG/M
3300003277\|JGI25908J49247_10077539	Not Available	824	Open in IMG/M
3300003388\|JGI25910J50241_10032640	All Organisms → Viruses → Predicted Viral	1749	Open in IMG/M
3300003393\|JGI25909J50240_1023333	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300003395\|JGI25917J50250_1003113	All Organisms → Viruses → Predicted Viral	4551	Open in IMG/M
3300003404\|JGI25920J50251_10055021	All Organisms → Viruses → Predicted Viral	1034	Open in IMG/M
3300003412\|JGI25912J50252_10025500	All Organisms → Viruses → Predicted Viral	1839	Open in IMG/M
3300003412\|JGI25912J50252_10108959	Not Available	663	Open in IMG/M
3300003986\|Ga0063233_10194991	Not Available	621	Open in IMG/M
3300004126\|Ga0066179_10154095	Not Available	623	Open in IMG/M
3300004126\|Ga0066179_10193613	Not Available	566	Open in IMG/M
3300004448\|Ga0065861_1146898	Not Available	878	Open in IMG/M
3300004460\|Ga0066222_1264861	Not Available	877	Open in IMG/M
3300004763\|Ga0007746_1037610	All Organisms → Viruses → Predicted Viral	1569	Open in IMG/M
3300005517\|Ga0070374_10094677	All Organisms → Viruses → Predicted Viral	1556	Open in IMG/M
3300005517\|Ga0070374_10168096	All Organisms → Viruses → Predicted Viral	1135	Open in IMG/M
3300005527\|Ga0068876_10769410	Not Available	510	Open in IMG/M
3300005581\|Ga0049081_10326291	Not Available	524	Open in IMG/M
3300005582\|Ga0049080_10004284	All Organisms → Viruses → Predicted Viral	4980	Open in IMG/M
3300005582\|Ga0049080_10016831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	2547	Open in IMG/M
3300005582\|Ga0049080_10026641	All Organisms → Viruses → Predicted Viral	2018	Open in IMG/M
3300005582\|Ga0049080_10076700	All Organisms → Viruses → Predicted Viral	1144	Open in IMG/M
3300005582\|Ga0049080_10137291	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	822	Open in IMG/M
3300005582\|Ga0049080_10289561	Not Available	529	Open in IMG/M
3300005662\|Ga0078894_10370816	All Organisms → Viruses → Predicted Viral	1295	Open in IMG/M
3300005662\|Ga0078894_10583188	Not Available	997	Open in IMG/M
3300007562\|Ga0102915_1275944	Not Available	543	Open in IMG/M
3300008110\|Ga0114343_1076654	All Organisms → Viruses → Predicted Viral	1211	Open in IMG/M
3300008111\|Ga0114344_1004336	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6241	Open in IMG/M
3300008113\|Ga0114346_1124914	All Organisms → Viruses → Predicted Viral	1139	Open in IMG/M
3300008267\|Ga0114364_1150297	Not Available	643	Open in IMG/M
3300009068\|Ga0114973_10145710	All Organisms → Viruses → Predicted Viral	1318	Open in IMG/M
3300009151\|Ga0114962_10571754	Not Available	590	Open in IMG/M
3300009154\|Ga0114963_10257932	Not Available	986	Open in IMG/M
3300009164\|Ga0114975_10088626	All Organisms → Viruses → Predicted Viral	1796	Open in IMG/M
3300009165\|Ga0105102_10945165	Not Available	500	Open in IMG/M
3300010157\|Ga0114964_10218290	Not Available	913	Open in IMG/M
3300010885\|Ga0133913_12606436	All Organisms → Viruses → Predicted Viral	1227	Open in IMG/M
3300011010\|Ga0139557_1008146	All Organisms → Viruses → Predicted Viral	2121	Open in IMG/M
3300012012\|Ga0153799_1029148	All Organisms → Viruses → Predicted Viral	1069	Open in IMG/M
3300012663\|Ga0157203_1014635	All Organisms → Viruses → Predicted Viral	1219	Open in IMG/M
3300012665\|Ga0157210_1004416	All Organisms → Viruses → Predicted Viral	3002	Open in IMG/M
3300013004\|Ga0164293_10046718	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3510	Open in IMG/M
3300013004\|Ga0164293_10965238	Not Available	534	Open in IMG/M
3300013004\|Ga0164293_11026159	Not Available	513	Open in IMG/M
3300013285\|Ga0136642_1019177	All Organisms → Viruses → Predicted Viral	2015	Open in IMG/M
3300017761\|Ga0181356_1081256	Not Available	1077	Open in IMG/M
3300017780\|Ga0181346_1020445	All Organisms → Viruses → Predicted Viral	2784	Open in IMG/M
3300017780\|Ga0181346_1200865	Not Available	719	Open in IMG/M
3300017785\|Ga0181355_1111337	Not Available	1126	Open in IMG/M
3300019784\|Ga0181359_1156734	Not Available	775	Open in IMG/M
3300020151\|Ga0211736_10882698	Not Available	784	Open in IMG/M
3300020161\|Ga0211726_10715939	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1210	Open in IMG/M
3300020162\|Ga0211735_10182937	Not Available	1782	Open in IMG/M
3300020162\|Ga0211735_10215473	Not Available	564	Open in IMG/M
3300020172\|Ga0211729_10768840	Not Available	741	Open in IMG/M
3300020205\|Ga0211731_10491405	Not Available	587	Open in IMG/M
3300020205\|Ga0211731_10509767	All Organisms → Viruses	1759	Open in IMG/M
3300020527\|Ga0208232_1006542	All Organisms → Viruses → Predicted Viral	1896	Open in IMG/M
3300020527\|Ga0208232_1007740	Not Available	1718	Open in IMG/M
3300020563\|Ga0208082_1062473	Not Available	620	Open in IMG/M
3300021121\|Ga0214173_101823	Not Available	2739	Open in IMG/M
3300021962\|Ga0222713_10443302	Not Available	789	Open in IMG/M
3300022407\|Ga0181351_1099135	All Organisms → Viruses → Predicted Viral	1129	Open in IMG/M
3300027125\|Ga0255106_1026487	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	825	Open in IMG/M
3300027136\|Ga0255107_1065933	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	576	Open in IMG/M
3300027143\|Ga0255105_1041557	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	797	Open in IMG/M
3300027336\|Ga0255128_1098121	Not Available	551	Open in IMG/M
3300027468\|Ga0209247_1012064	All Organisms → Viruses → Predicted Viral	1143	Open in IMG/M
3300027581\|Ga0209651_1204445	Not Available	514	Open in IMG/M
3300027586\|Ga0208966_1058038	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300027608\|Ga0208974_1006791	Not Available	3861	Open in IMG/M
3300027608\|Ga0208974_1068165	Not Available	991	Open in IMG/M
3300027608\|Ga0208974_1068947	Not Available	984	Open in IMG/M
3300027644\|Ga0209356_1008593	All Organisms → Viruses → Predicted Viral	3658	Open in IMG/M
3300027679\|Ga0209769_1168742	Not Available	687	Open in IMG/M
3300027708\|Ga0209188_1069845	Not Available	1490	Open in IMG/M
3300027708\|Ga0209188_1075506	All Organisms → Viruses → Predicted Viral	1413	Open in IMG/M
3300027708\|Ga0209188_1182613	Not Available	767	Open in IMG/M
3300027732\|Ga0209442_1014198	All Organisms → Viruses → Predicted Viral	3816	Open in IMG/M
3300027744\|Ga0209355_1007609	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5769	Open in IMG/M
3300027785\|Ga0209246_10084501	All Organisms → Viruses → Predicted Viral	1239	Open in IMG/M
3300027797\|Ga0209107_10359385	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	672	Open in IMG/M
3300027969\|Ga0209191_1225253	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	726	Open in IMG/M
3300031784\|Ga0315899_10709740	Not Available	933	Open in IMG/M
3300031784\|Ga0315899_10835970	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	838	Open in IMG/M
3300031857\|Ga0315909_10226740	All Organisms → Viruses → Predicted Viral	1456	Open in IMG/M
3300033816\|Ga0334980_0209962	Not Available	779	Open in IMG/M
3300033992\|Ga0334992_0001795	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16805	Open in IMG/M
3300033993\|Ga0334994_0103062	All Organisms → Viruses → Predicted Viral	1673	Open in IMG/M
3300033993\|Ga0334994_0290120	Not Available	836	Open in IMG/M
3300033994\|Ga0334996_0191063	Not Available	1102	Open in IMG/M
3300033996\|Ga0334979_0227065	All Organisms → Viruses → Predicted Viral	1089	Open in IMG/M
3300034019\|Ga0334998_0411168	Not Available	774	Open in IMG/M
3300034062\|Ga0334995_0115021	All Organisms → Viruses → Predicted Viral	2008	Open in IMG/M
3300034082\|Ga0335020_0000257	Not Available	42207	Open in IMG/M
3300034082\|Ga0335020_0478106	Not Available	593	Open in IMG/M
3300034093\|Ga0335012_0024007	All Organisms → Viruses → Predicted Viral	3617	Open in IMG/M
3300034102\|Ga0335029_0192077	All Organisms → Viruses → Predicted Viral	1363	Open in IMG/M
3300034102\|Ga0335029_0309179	Not Available	993	Open in IMG/M
3300034104\|Ga0335031_0844725	Not Available	507	Open in IMG/M
3300034105\|Ga0335035_0205867	All Organisms → Viruses → Predicted Viral	1208	Open in IMG/M
3300034108\|Ga0335050_0340038	Not Available	698	Open in IMG/M
3300034110\|Ga0335055_0435067	Not Available	536	Open in IMG/M
3300034118\|Ga0335053_0239862	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1169	Open in IMG/M
3300034279\|Ga0335052_0275120	Not Available	939	Open in IMG/M
3300034356\|Ga0335048_0025985	All Organisms → Viruses → Predicted Viral	4037	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	96.40%
Marine	Environmental → Aquatic → Marine	3.60%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	44.14%
Lake	Environmental → Aquatic → Freshwater → Lake	41.44%
River	Environmental → Aquatic → Freshwater → River	3.60%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.70%
Coastal	Environmental → Aquatic → Marine → Coastal	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	41.44%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	36.94%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.41%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.70%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.90%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	27.03%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	20.72%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	9.91%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.01%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.11%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.41%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.60%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.70%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.80%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.90%
Lotic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.90%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.90%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000206	Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003986	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (v2)	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020563	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021121	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 epilimnion	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300027125	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_8h	Environmental	Open in IMG/M
3300027136	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_8h	Environmental	Open in IMG/M
3300027143	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_8h	Environmental	Open in IMG/M
3300027336	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepC_8d	Environmental	Open in IMG/M
3300027468	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
M3P_100818142	3300000206	Lotic	MQIIYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNIEEFEVNA*
JGI12421J11937_100411561	3300000756	Freshwater And Sediment	MQKVYVLQAQGLGENEYEFYNIGVYDSTDNLENAKQNFTREMNDNGLEDVVLNVEEYEVNA*
B570J40625_1003454082	3300002835	Freshwater	MQTMYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVVLNVEEYLVNA*
B570J40625_1015492782	3300002835	Freshwater	MQTMYVLQVQGLGDNEYEFCNVGVYDSVDNLENAKQNFTRKWQDDGLLDVVFNVEEFAVNA*
JGI25908J49247_100334034	3300003277	Freshwater Lake	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQHEVDANA*
JGI25908J49247_100775391	3300003277	Freshwater Lake	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYEVDANA*
JGI25910J50241_100326406	3300003388	Freshwater Lake	MQIMYVLQAQGLGDNEYEYYNIGVYDSVANLETAKQNFTQEWEADGLTDVQFAVEEFEVNANA*
JGI25909J50240_10233334	3300003393	Freshwater Lake	MQIIYVLQAXGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYEVDANA*
JGI25917J50250_10031139	3300003395	Freshwater Lake	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELRLEDVELNVEQYEVDANA*
JGI25920J50251_100550214	3300003404	Freshwater Lake	MQIMYVLQAQGLGDNEYEYYNVGVYDSVDSLEXAKQNFTQEWEAGGLTDVQFAVEEFEV
JGI25912J50252_100255002	3300003412	Freshwater Lake	MQIMYVLQAQGLGDNEYEYYNVGVYDSVDSLENAKQNFTQEWEAGGLTDVQFAVEEFEVNA*
JGI25912J50252_101089591	3300003412	Freshwater Lake	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYEVDAN
Ga0063233_101949912	3300003986	Freshwater Lake	MQIMYVLQAQGLGDNEYEYYNVGVYDSVDSLERAKQNFTQEWEAGGLTDVQFAVEEFEVNANA*
Ga0066179_101540952	3300004126	Freshwater Lake	MQTIFVLQAQGLGDNEYEFYNVGVYDSISNLENAKQNFTREWQAGGLTDVVFNVEEYEVNSNA*
Ga0066179_101936131	3300004126	Freshwater Lake	MQTVYVLQAQGLGDNEYEFYNVGVYDSVDSLENAKQNFTREWYDDGLTDVVFNVDEYEVNA*
Ga0065861_11468981	3300004448	Marine	MQKMYVLQAQGFGDNENEFYNIGVYDSIDSLENAKQNLTREAYDDGLTDVVLNVEEFEVNA*
Ga0066222_12648611	3300004460	Marine	MQKMYVLQAQGFGDNENEFYNIGVYDSVDSLENAKQNLVREAYDDGLTDVVLNVEEFEVNA*
Ga0007746_10376101	3300004763	Freshwater Lake	MQIMYVLQAQGLGDNEYEYYNVGVYDSVDSLERAKQNFTQEWEAGGLTDVQFAVEEFEVNA*
Ga0070374_100946772	3300005517	Freshwater Lake	MQTVYVLQAQGLGDNEYEFYNVGVYDSVDSLENAKQNFTREWYDNGLTDVVFNVDEYEVNA*
Ga0070374_101680961	3300005517	Freshwater Lake	GLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQHEVDANA*
Ga0068876_107694102	3300005527	Freshwater Lake	MQKMYVLQAQGLGDNEYEFYNVGVYDSISNLENAKQNFTSEWQAGGLTDVVFNVEEYEVNANA*
Ga0049081_103262911	3300005581	Freshwater Lentic	MQKVYVLQAQGLGENEYEFYNIGVYDSIDNLENAKQNFTRDMHDNGLEDVVLNVEEYEVNA*
Ga0049080_1000428420	3300005582	Freshwater Lentic	MQIMYVLQAQGLGDNEYEYYNIGVYDSVANLERAKQNFTQEWEADGLTDVQFAVEEFEVNANA*
Ga0049080_100168314	3300005582	Freshwater Lentic	MKIVFVLQAQGFGDNENEFYNIGVYDSIDNLNNAKENCIREAYDDGITEVVFNIEEFEVNA*
Ga0049080_100266414	3300005582	Freshwater Lentic	MQTMYVLQAQGLGDNEYEFYNVGVYDSVDNLENAKQNFTREWYDDGLTDVQFAVEEFEVNA*
Ga0049080_100767003	3300005582	Freshwater Lentic	MQKVYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNIEEFEVNA*
Ga0049080_101372913	3300005582	Freshwater Lentic	MQTVYVLQAQGLGDNEYEFYNVGVYDSVDSLENAKQNFTREWYDGGLTDVVFNVDEYEINA*
Ga0049080_102895611	3300005582	Freshwater Lentic	KVYVLQAQGLGENEYEFYNIGVYDSTDNLENAKQNFTREMNDNGLEDVVLNVEEYEVNA*
Ga0078894_103708163	3300005662	Freshwater Lake	MQKVYVLQAQGLGENEYEFYNVGVYDSIDNLENAKQNFTREMNDNGLEDVVLNVEEYEVNA*
Ga0078894_105831883	3300005662	Freshwater Lake	MQKVYVLQAQGLGENEYEFYNIGVYDSIDNLENAKQKFTSDMHNNGLEDVVLNVEEYEVNANA*
Ga0102915_12759441	3300007562	Estuarine	MQIIYVLQAQGLGDNEYEFYNVGVYDSISNLKNAKQNFTREWEAGGLTDVVLNVEEFEVNA*
Ga0114343_10766543	3300008110	Freshwater, Plankton	MQKVYVLQAQGLGDNEYEFYNVGVYDSISNLERAKQNFTSEWAAGGLEDVEFNVEEYTVNANA*
Ga0114344_10043362	3300008111	Freshwater, Plankton	MQKVYVLQAQGFGDNEYEFCNIGVYDSISNLENAKQKFTSEWEADGLTDVVLNVEEYKVNA*
Ga0114346_11249141	3300008113	Freshwater, Plankton	MQTIFVLQAQGLGDNEYEFYNVGVYDSISNLERAKQNFTSEWAAGGLEDVEFNVEEYTVNANA*
Ga0114364_11502972	3300008267	Freshwater, Plankton	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWDAGRLEDVELNVEQYEVDANA*
Ga0114973_101457104	3300009068	Freshwater Lake	MQKVYVLQAQGFGDNENEFYNIGVYDSVDSLENAKQNLVREAYDDGLTDVVLNVEEFEVNA*
Ga0114962_105717542	3300009151	Freshwater Lake	VRYNKFLNNAIGAKTMQKVYVLQAQGFGDDEDAFYNIGVYDSIDSLENAKQNLTREAYDDCFTDVVLNVEEFEVNA*
Ga0114963_102579323	3300009154	Freshwater Lake	MQKVYVLQAQGFGDDEDAFYNIGVYDSVDSLENAKQNLTREAYDDCFTDVVLNVEEFEVNA*
Ga0114975_100886266	3300009164	Freshwater Lake	MQKVYVLQVQGWGDDEDAFYNTGVYDSIDSLENAKQNLVREAYDDGLTDVVLNVEEFEVNA*
Ga0105102_109451651	3300009165	Freshwater Sediment	MQTMYVLQAQGLGENEYEFYNIGVYDSIDNLENAKQNFTREWQADGLTDVVLNVEEYEVNANA*
Ga0114964_102182901	3300010157	Freshwater Lake	MQKVYVLQAQGFGDNENEFYNIGVCDSVDSLENAKQNLTREAYDDCFTDVVLNVEEFEVNA*
Ga0133913_126064363	3300010885	Freshwater Lake	MQKVYVLQAQGLGENEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNVEEFEVNA*
Ga0139557_10081462	3300011010	Freshwater	MYVLQAQGLGDNEYEYYNVGVYDSVDSLERAKQNFTQEWEAGGLTDVQFAVEEFEVNA*
Ga0153799_10291483	3300012012	Freshwater	MQTVYVLQAQGLGDNEYEFYNVGVYDSVDSLENAKQNFTREWYDGGLTDVVFNXXXXVEYYVD*
Ga0157203_10146354	3300012663	Freshwater	MQKVYVLQAQGLGDNEYEFYNVGVYDSIDNLENAKQNFTRDMNDNGLEDVVLNVEEYEVNA*
Ga0157210_10044163	3300012665	Freshwater	MQKVYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEEVVLNVEEYEVNA*
Ga0164293_100467185	3300013004	Freshwater	MYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVVLNVEEYLVNA*
Ga0164293_109652381	3300013004	Freshwater	MQTMYVLQAQGLGENEYEFYNIGVYDSIDNLENAKQKFTRDMHNNGLEDVVLNVEEYEVNANA*
Ga0164293_110261592	3300013004	Freshwater	MQKVYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNVEEYEVNA*
Ga0136642_10191771	3300013285	Freshwater	IGAKTMQKVYVLQAQGFGDNEYEFYNIGVYNSIDNLENAKQNCVREAYDDGLIDVVLNVEEFEVNA*
Ga0181356_10812566	3300017761	Freshwater Lake	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVE
Ga0181346_10204456	3300017780	Freshwater Lake	MQIMYVLQAQGLGDNEYEFYNIGVYDSVDSLENAKQNFTQEWEAGGLTDVQFAVEEFEVN
Ga0181346_12008653	3300017780	Freshwater Lake	VLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYEVDANA
Ga0181355_11113371	3300017785	Freshwater Lake	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEVAKQNFINEWAAGGLEDVELNVEQYEVDANA
Ga0181359_11567342	3300019784	Freshwater Lake	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYEVDANA
Ga0211736_108826982	3300020151	Freshwater	MQIIYVLQAQGLGDNEYEFYNVGVYDSISNLERAKQNFTQEWAAGGLEDVVLNVEQYEVNANA
Ga0211726_107159393	3300020161	Freshwater	MQIIYVLQAQGLGDNEYEFYNVGVYDSISNLERAKQNFTSEWAAGGLEDVVLNVEQYEVNANA
Ga0211735_101829372	3300020162	Freshwater	MQIMYVLQAQGLGDNEYEFYSVGVYDSTANLERAKQNFTQEWAAGGLEDVVLNVEQYEVNANA
Ga0211735_102154732	3300020162	Freshwater	MQIIYVLQAQGLGDNEYEFYNVGIYDSISNLERAKQNFTSEWAAGGLEDVVLNVEQYEVNAN
Ga0211729_107688401	3300020172	Freshwater	MQIIYVLQAQGLGDNEYEFYNVGVYDSISNLERAKQNFTSEWAAGGLEDVVLNVEQYEVNANT
Ga0211731_104914052	3300020205	Freshwater	MQKVYVLQAQGLGDNEYEFYNIGVYDSISNLENAKQNFTRECYDDGLLDVVLNVDEYEVN
Ga0211731_105097671	3300020205	Freshwater	MHIMYVLQAQGLGDNEYEYYNVGVYDSIANLETAKQNFTQEWEAGGLTDVQFAVEEFEVNANA
Ga0208232_10065425	3300020527	Freshwater	MQTMYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVVLNVEEYLVN
Ga0208232_10077404	3300020527	Freshwater	MQKVYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQKFTRDMHNNGLEDVVLNVEEYEVNANA
Ga0208082_10624731	3300020563	Freshwater	MQKVYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWEADGLEDVEFNVEQYEVDANA
Ga0214173_1018235	3300021121	Freshwater	MQKVYVLQVQGWGDDEDAFYNTGVYDSIDSLENAKQNLVREAYDDGLTDVVTAIEPVTVD
Ga0222713_104433022	3300021962	Estuarine Water	MQKVYVLQAQGLGNNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNIEEFEVN
Ga0181351_10991351	3300022407	Freshwater Lake	MQIMYVLQAQGLGDNEYEYYNVGVYDSVDSLERAKQNFTQEWEAGGLTDVQFAVEE
Ga0255106_10264873	3300027125	Freshwater	RTMQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYEVDANA
Ga0255107_10659331	3300027136	Freshwater	LQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYEVDANA
Ga0255105_10415571	3300027143	Freshwater	AQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYEVDANA
Ga0255128_10981212	3300027336	Freshwater	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYE
Ga0209247_10120641	3300027468	Freshwater Lake	MQTVYVLQAQGLGDNEYEFYNVGVYDSVDSLENAKQNFTREWYDNGLTDVVFNVDEYEVN
Ga0209651_12044452	3300027581	Freshwater Lake	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQHEVDANA
Ga0208966_10580381	3300027586	Freshwater Lentic	MQIMYVLQAQGLGDNEYEYYNVGVYDSVDSLERAKQNFTQEWEAGGLTDVQFAVEEFEVN
Ga0208974_10067911	3300027608	Freshwater Lentic	VLQAQGLGENEYEFYNIGVYDSTDNLENAKQNFTREMHDDGLLDVVLNVEEYEVNA
Ga0208974_10681653	3300027608	Freshwater Lentic	MQKVYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNIEEFEVN
Ga0208974_10689472	3300027608	Freshwater Lentic	MQIMYVLQAQGLGDNEYEFYNIGVYDSVDSLENAKQNFTRECNDDGLLDVVLNVEEFEVN
Ga0209356_10085931	3300027644	Freshwater Lake	MQIMYVLQAQGLGDNEYEYYNIGVYDSVANLETAKQNFTQEWEADGLTDVQFAVEEFEVNANA
Ga0209769_11687422	3300027679	Freshwater Lake	MQTIFVLQAQGLGDNEYEFYNVGVYDSISNLENAKQNFTREWQAGGLTDVVFNVEEYEVNSNA
Ga0209188_10698453	3300027708	Freshwater Lake	MQKVYVLQAQGFGDNENEFYNIGVYDSVDSLENAKQNLTREAYDDCFTDVVLNVEEFEVN
Ga0209188_10755063	3300027708	Freshwater Lake	MQKVYVLQAQGFGDDEDAFYNIGVYDSVDSLENAKQNLTREAYDDCFTDVVLNVEEFEVN
Ga0209188_11826131	3300027708	Freshwater Lake	MQKVYVLQAQGWGDSEDAFYNIGVYDSIDSLENAKQNCIREAYDDELEVVLNVEEFEVNA
Ga0209442_10141984	3300027732	Freshwater Lake	MQIMYVLQAQGLGDNEYEYYNVGVYDSVDSLENAKQNFTQEWEAGGLTDVQFAVEEFEVN
Ga0209355_10076094	3300027744	Freshwater Lake	MQIMYVLQAQGLGDNEYEYYNIGVYDSVDSLENAKQNFTQEWEAGGLTDVQFAVEEFEVN
Ga0209246_100845014	3300027785	Freshwater Lake	MQIIYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWDAGGLEDVELNVEQYEVDANA
Ga0209107_103593853	3300027797	Freshwater And Sediment	MQTVYVLQAQGLGDNEYEFYNVGVYDSVDSLENAKQNFTREWYDGGLTDVVFNVDEYEIN
Ga0209191_12252532	3300027969	Freshwater Lake	MQKVYVLQVQGWGDDEDAFYNTGVYDSIDSLENAKQNLVREAYDDGLTDVVLNVEEFEVN
Ga0315899_107097403	3300031784	Freshwater	MQKVYVLQAQGFGDNEYEFCNIGVYDSISNLENAKQKFTSEWEADGLTDVVLNVEEYEVN
Ga0315899_108359703	3300031784	Freshwater	LQAQGLGDNEYEFYNVGVYDSISNLERAKQNFTSEWAAGGLEDVEFNVEEYTVNANA
Ga0315909_102267402	3300031857	Freshwater	MQKVYVLQAQGLGDDEDAFYNIGVYDSISNLENAKQNFTSEWEADGLTDVVLNVEEFEVN
Ga0334980_0209962_554_745	3300033816	Freshwater	MQKVYVLQAQGLGDNEYEFYNVGVYSSVAKLEAAKQNFINEWAAGGLEDVELNVEQYEVDANA
Ga0334992_0001795_14841_15017	3300033992	Freshwater	MYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVVLNVEEYLVNA
Ga0334994_0103062_260_451	3300033993	Freshwater	MQKVYVLQAQGLGENEYEFYNIGVYDSISNLENAKQKFTREMNDNGLEDVVLNVEEYEVNANA
Ga0334994_0290120_684_836	3300033993	Freshwater	MQTMYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVV
Ga0334996_0191063_36_221	3300033994	Freshwater	MQKVYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVVLNVEEYEVN
Ga0334979_0227065_86_277	3300033996	Freshwater	MQKVYVLQAQGLGENEYEFYNIGVYDSIDNLENAKQKFTSDMHNNGLEDVVLNVEEYEVNANA
Ga0334998_0411168_185_391	3300034019	Freshwater	MFKKEQTMQTMYVLQVQGLGDNEYEFCNVGVYDSVDNLENAKQNFTRKWQDDGLLDVVFNVEEFAVNA
Ga0334995_0115021_595_780	3300034062	Freshwater	MQKVYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVVLNVEEYLVN
Ga0335020_0000257_42040_42207	3300034082	Freshwater	LQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVVLNVEEYLVNA
Ga0335020_0478106_193_378	3300034082	Freshwater	MQKVYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEEVVLNVEEYEVN
Ga0335012_0024007_328_513	3300034093	Freshwater	MQTVYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVELNVEEYEVN
Ga0335029_0192077_786_977	3300034102	Freshwater	MQTVYVLQAQGLGDNEYEFYNVGVYDSVSNLETAKQNFINEWAAGGLEDVEINVEKYEVNANT
Ga0335029_0309179_488_679	3300034102	Freshwater	MQTMYVLQAQGLGDNEYEFYNVGVYDSISNLENAKQNFTREWQADGLTDVVLNVEEYEVNANA
Ga0335031_0844725_187_378	3300034104	Freshwater	MQKVYVLQAQGLGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNVEEYEVNANA
Ga0335035_0205867_986_1171	3300034105	Freshwater	MQTVYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVVLNVEEYLVN
Ga0335050_0340038_524_697	3300034108	Freshwater	MQKVYVLQAQGLGDNEYEFYNVGVYDSISNLERAKQNFTSECAEGGLEDVVLNVEEYL
Ga0335055_0435067_268_444	3300034110	Freshwater	MYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVVLNVEEYEVNA
Ga0335053_0239862_1015_1167	3300034118	Freshwater	LGDNEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNVEEYEVNA
Ga0335052_0275120_147_332	3300034279	Freshwater	MQTMYVLQAQGLGENEYEFYNIGVYDSIDNLENAKQNFTREMNDNGLEDVVLNVEEYEVN
Ga0335048_0025985_2262_2438	3300034356	Freshwater	MYVLQAQGLGDNEYEFYNVGVYDSTANLERAKQKFTQEWAEGGLEDVELNVEEYEVNA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085149

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences