NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F085135

Metagenome Family F085135

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085135
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 40 residues
Representative Sequence IHAEFGFEIGFVPSGNSSVTLPYTRDKGALPWQPILGLKLL
Number of Associated Samples 10
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.90 %
% of genes from short scaffolds (< 2000 bps) 1.80 %
Associated GOLD sequencing projects 6
AlphaFold2 3D model prediction Yes
3D model pTM-score0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.15
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005652|Ga0056135_10412251Not Available672Open in IMG/M
3300005652|Ga0056135_10505596Not Available565Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont100.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005652Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1Host-AssociatedOpen in IMG/M
3300005653Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1Host-AssociatedOpen in IMG/M
3300005970Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2Host-AssociatedOpen in IMG/M
3300005999Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.2Host-AssociatedOpen in IMG/M
3300007818Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2Host-AssociatedOpen in IMG/M
3300008215Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.1Host-AssociatedOpen in IMG/M
3300027044Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027624Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027658Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027661Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0056135_1014926313300005652Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVLSGNSYVTLMYTKDKGVLPWQPIMRLKLL*
Ga0056135_1017376023300005652Marine Gutless Worms SymbiontMRHIDAEFGLEIGFVLSGNSSATLPYTRDKGALPWQPILGPKLL*
Ga0056135_1017473713300005652Marine Gutless Worms SymbiontFGFEIGFVLSGNSSVTLPYIRDKGALPWKPILGLK*
Ga0056135_1018622213300005652Marine Gutless Worms SymbiontAEFGFEIGFVPSGNTSVTLPYTRDNGALPWQPILGQKLL*
Ga0056135_1021213513300005652Marine Gutless Worms SymbiontFGFEIGFVLSGNSSVTLPYTRDKGALPWQPILRLKLL*
Ga0056135_1021400713300005652Marine Gutless Worms SymbiontEFGFEIGFVPSGNSSVTLPYYTRDKGALPWQQIFGQKLL*
Ga0056135_1022462233300005652Marine Gutless Worms SymbiontMQHIRAEFGFEIGFVPSGNSSVTLPYTRNKGALPWQPILVIKLL*
Ga0056135_1023152743300005652Marine Gutless Worms SymbiontLYMRHIRAEFGFEIGFMLSANLSVALPYTRDKGALTWQSIWD*
Ga0056135_1024665033300005652Marine Gutless Worms SymbiontMQHINAEFGFGIGFVQSGNSSITPPYTRDKGALPWPQILGQKLL*
Ga0056135_1027022323300005652Marine Gutless Worms SymbiontMRHIHAQFGFEIGFMLPGNLSVTLPYRRDKGASPRQP
Ga0056135_1027944013300005652Marine Gutless Worms SymbiontFSCKRHIHAEFGFEIGFVPSGNSSMTLPYTRDKGALPWQPILELKLL*
Ga0056135_1032078323300005652Marine Gutless Worms SymbiontCMQHIHAEFGFEIGFVLSGNSSVTLPYTRDKGALPWQPILGLK*
Ga0056135_1032226213300005652Marine Gutless Worms SymbiontIHAEFGFEIGFVPSGYSSVTLPYTRDKGALPWQPILGQKLL*
Ga0056135_1038859613300005652Marine Gutless Worms SymbiontFDSEIGFVLSGNSSVTLPYTRDKGALPWQPILGVK*
Ga0056135_1039013243300005652Marine Gutless Worms SymbiontAEFGFEIGFVPSGNSSMTLPYARDKGALLWQPILGLKLL*
Ga0056135_1041225123300005652Marine Gutless Worms SymbiontMQHTHAEFGFEIGFVQPWNSSMTLLYTRDKGALPWRPILGLKLL*
Ga0056135_1042377613300005652Marine Gutless Worms SymbiontRHIHAEFGFEIGFVPSGNSSVTLPYTKDKGALPWQPILRLKLLEMHTNAFL*
Ga0056135_1043300113300005652Marine Gutless Worms SymbiontKRHIHAELGFEIGFVPSGYSSVTLPYTSDKGALPCQPIFGQKLL*
Ga0056135_1043309723300005652Marine Gutless Worms SymbiontHAEFGFEIGFVPLGNSSMTLPYTRDKGALPWQPILGLKLL*
Ga0056135_1047953713300005652Marine Gutless Worms SymbiontHIHAEFGFEIGFVLSGNSSVTLPYTRDKGALPWQPILG*
Ga0056135_1050559633300005652Marine Gutless Worms SymbiontMQHIPAEFGFEIGFVLSWNSSVTLPYTRNKWALPWQPILV
Ga0056135_1053018213300005652Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVPSGNSSMTLPYTRDKGALPWQPI
Ga0056135_1053330113300005652Marine Gutless Worms SymbiontFEIGFVLSWNSSVTLPYAVNKGALPWQPILVLKLL*
Ga0056135_1053900213300005652Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVPSGNSSMTLPYARDKGALLW*
Ga0056135_1054572723300005652Marine Gutless Worms SymbiontGFEIGFVPSGNSSVTLPYTRDKGALPWQPILGLKSL*
Ga0056135_1056920113300005652Marine Gutless Worms SymbiontFGFEIGFVLSENSSVILLYRRVKGALTWQPILGLKLL*
Ga0056133_1007529963300005653Marine Gutless Worms SymbiontEFGFEIGFVPSGNSFVTLPYTRDKGALPWQLILGQILL*
Ga0056133_1007748053300005653Marine Gutless Worms SymbiontMLYIDAEFGFEIGFHLSANSSVTVPYTRDKGALLWQPFWD*
Ga0056133_1008133733300005653Marine Gutless Worms SymbiontSCMQHIHAEFGFEIGFVLSGNSPVTLLYTRDKSVLK*
Ga0056133_1012625313300005653Marine Gutless Worms SymbiontMHNIHAEFGFEIGFVLLGNSFVTLPYTRDKGALPRQP
Ga0056133_1016069333300005653Marine Gutless Worms SymbiontEFGFEIGFVPSGNSSVTLPYTRDKGALPWQPILGQKLL*
Ga0056133_1023134713300005653Marine Gutless Worms SymbiontHTDAEFDFEIRFVLSGNSSLTLPYTRDKGVLPWQPILGLKFP*
Ga0056133_1029345613300005653Marine Gutless Worms SymbiontEFGFEIGFVLSGNSSVTLPYTRNKGALPRQPILVLKLL*
Ga0056133_1037058613300005653Marine Gutless Worms SymbiontIHAEFGFEIGFVPSGNSSVTLPYTRDKGALPWQPILGLKLL*
Ga0056133_1037779923300005653Marine Gutless Worms SymbiontMQHIHAEFGFETRFVLSGNSSVTLPYTANKGALPWQPILVLKLV*
Ga0056133_1039163513300005653Marine Gutless Worms SymbiontGFEIGFVPSGNSSVTLPYTRDKGALPWQPMLGLKLL*
Ga0056133_1041057723300005653Marine Gutless Worms SymbiontIHAEFGFEIGFVPSGNSSVTLPYTKDKGALPWQPILGLKLV*
Ga0056133_1042678513300005653Marine Gutless Worms SymbiontMQHIHAEFGFQIGFVLSGNSSVTLPYTRDKGALPWQPILGLKLL
Ga0056133_1046052913300005653Marine Gutless Worms SymbiontAEFDSEIGFVLSGNSSVTLPYTRDKGALPWQPILGLK*
Ga0056133_1047225413300005653Marine Gutless Worms SymbiontMQLIHAEFGFEIGFVPSENSSVTLPYTRDKGALPWQPILGLK
Ga0056133_1050087723300005653Marine Gutless Worms SymbiontFSCMQHIHAEFGFEIGFVPSGNSSMTLPYTRDKGVLPWQPILGLKLL*
Ga0056133_1052692413300005653Marine Gutless Worms SymbiontIHAEFGFEIGFVLSENSYLTLLYTKDKGALPWQPILGLKLL*
Ga0056133_1053763013300005653Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVLSGNSSVTLPYTREKGALPWQPI
Ga0056133_1054069313300005653Marine Gutless Worms SymbiontEIGFVPSGNSAVTLPYTRDKGALPWQPILGLKLL*
Ga0056133_1056381013300005653Marine Gutless Worms SymbiontHIHAEFGFEIGFVPSGNSSVTLPYTRDKGALPWQPILGPKLL*
Ga0056133_1056811423300005653Marine Gutless Worms SymbiontMQHIHAEFGFETGFVLSGNSSMTLPYTGNKGALPWQPILVLKLL*
Ga0056133_1058124313300005653Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVPSGNSSMTLPYTRDKGALPWQPILGL
Ga0056133_1058359613300005653Marine Gutless Worms SymbiontIRAEFGFEIGFVLSWNSSVTLPYTRNKGALPWQPILVLKLV*
Ga0056133_1058888613300005653Marine Gutless Worms SymbiontMRHIRAEFGFEIGFMLSANLSVALPYTRDKGALTWQST
Ga0056133_1059334223300005653Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVLSWNSSVTLPYTMNKGALPWQPILVIKLL*
Ga0056134_1003036013300005970Marine Gutless Worms SymbiontMQHINAEFGFGMGFVQSGNSSMTLPYTRDKGALPWQPILGQKLL*
Ga0056134_1015593233300005970Marine Gutless Worms SymbiontMQHIHAEFGFEIGFHLSANSSVTLPYIRDKGALPWQPILGLKL
Ga0056134_1017700233300005970Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVLSGNSSVTLSYTRDKGRLPRQPILGLKLV*
Ga0056134_1021592813300005970Marine Gutless Worms SymbiontQIHAEFGFEIGFVPSGNSSVTLPYTKDKGALPWQPILGLKLV*
Ga0056134_1022411513300005970Marine Gutless Worms SymbiontMQHIHAEFGFEIRFVLSGNSSVTLPYTRNKGALPWQPILVLKLL*
Ga0056134_1029330813300005970Marine Gutless Worms SymbiontMQHIRAEFGFDFEIGFALLGNSSVTLPYTRDKGALPWQPILGQKCYKCT*
Ga0056134_1031238813300005970Marine Gutless Worms SymbiontHAEFGFEIGFVPLGNSSVTLPYTRVKGVLPRQPILGQKLL*
Ga0056134_1032883123300005970Marine Gutless Worms SymbiontHAEFGFEIGFVPSGNSYVTLPYTRDKGVLPWQPILVLKLL*
Ga0056134_1038258113300005970Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVPSGNSSMTLPYTRDKGALPWQPILGLKL
Ga0056134_1042744023300005970Marine Gutless Worms SymbiontMQHMRVEFGFETGIVLSGNSSVTFPYTRDKGALLRQPIWD*
Ga0056136_100635923300005999Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVPSGNSSMTLPYARDKGALLWQPILGLKLL*
Ga0056136_105621823300005999Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVPSENSCMTLRYKRDKGALAWQPILGLKLL*
Ga0056109_104471013300007818Marine Gutless Worms SymbiontAEFGFEIGFVLSGNSSVILPYTRDKRVLPWQPILGP*
Ga0056109_109250313300007818Marine Gutless Worms SymbiontHIHAEFGFEIGFVQPGNSSVTLPYTRDKGALPWQQILGQKLL*
Ga0056109_111044023300007818Marine Gutless Worms SymbiontMQHIRAEFGFETGFALSRNSSVTLPYTRDKGALLWQPILGQK
Ga0056109_115237623300007818Marine Gutless Worms SymbiontHAEFGFEIGFVPSGNSSMTLPYTRDKGALPWQPIWD*
Ga0056108_112329323300008215Marine Gutless Worms SymbiontMQHINAKFGFGIGFVQSGNSSITLTYTRDKGALPW
Ga0056108_122602013300008215Marine Gutless Worms SymbiontHAEFGFEIGFVLSGNSSVTLPYTRDKKVLPWQPILRP*
Ga0056108_130027813300008215Marine Gutless Worms SymbiontHTEFGFEIGFVPSGNSSLTLPYTRDKGALPWQPILGLRLL*
Ga0056108_130346313300008215Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVPSGNSSMTLPYTRDKGALPWQPILGLKLL*
Ga0056108_131584613300008215Marine Gutless Worms SymbiontEFGFEIGFVLLGNSSVTLPYTSDKMALPWQPILGLKLL*
Ga0056108_131802013300008215Marine Gutless Worms SymbiontHAEFGYEIGFVQPGNSFVTLPYTRDKGALPWQPILGQKLL*
Ga0056108_135817613300008215Marine Gutless Worms SymbiontRHIHAEFGFEIGFVPSGNLSVTLPYTRDKGALPWQPILALKLL*
Ga0056108_140162323300008215Marine Gutless Worms SymbiontHAEFGFEIGFVPSGNSSVTLPYTRDKGALPWQPILG*
Ga0056108_140827813300008215Marine Gutless Worms SymbiontRHVYAEFDSEIGFVLSGNSSVTLPYTRDKAALPWQPILGVK*
Ga0056108_140922413300008215Marine Gutless Worms SymbiontMQHVHAEFGFDIGFVLSENSSVTLPYTRDKGALPWQPI
Ga0056108_141158723300008215Marine Gutless Worms SymbiontMQNIHAEFGFEIGFVPSGNSSMTLPYTRDKGALPWQPILGLKL
Ga0056108_146018613300008215Marine Gutless Worms SymbiontFEIGFVPSGNSSVTLPYTRDKGALPCQAIFGLKLL*
Ga0056108_146319613300008215Marine Gutless Worms SymbiontMQHIHAVFGFEIGFVPLENLSVTLPYTRDKGALPWQPISGQKLL
Ga0056108_149857613300008215Marine Gutless Worms SymbiontIHAEFGFEIGFVPSGNSSMTLPYTRDKGALPWQPILGLKLL*
Ga0056108_151422213300008215Marine Gutless Worms SymbiontEFGFEIGFVLSRNSSVTLPYTRDKGALPWQPTLGLILL*
Ga0056108_152877413300008215Marine Gutless Worms SymbiontEFGFEIGFVPSGNSSLTLSYTRDKGALPWQPILGLKLL*
Ga0056108_154321113300008215Marine Gutless Worms SymbiontMQRIHAEFGFEIGFVLSGNSSVTLPYTRDKGALPW
Ga0056108_155870913300008215Marine Gutless Worms SymbiontHAEFGFEIGFVPSGNSSMTLPYTRDKGALPWQPILGLKLL*
Ga0056108_155942413300008215Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVLSGNSSMTVPYTGNKGALPW
Ga0209785_103087413300027044Marine Gutless Worms SymbiontMQHIHAEFGFEIGFALSGNSSVTLPYTRDKGALPW
Ga0209785_104182213300027044Marine Gutless Worms SymbiontESGFEIGFFVLSENSSVTLAYTRDKGALPWQPILRLKLL
Ga0209785_104842813300027044Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVLSGNSSVTLPYTRNKGALPWQPI
Ga0209789_1006454813300027624Marine Gutless Worms SymbiontKPHIHAEFGFEIGFMPLGNSSVTLPYTRDKGALPWQPILGQKFL
Ga0209789_1009401623300027624Marine Gutless Worms SymbiontQHIHAEFGFEIGFLLSGNSSVTLPYTRDKGALPWKPIMD
Ga0209789_1016229713300027624Marine Gutless Worms SymbiontMRHIRTESGFEIGFVLSWNSSVTVRYTRDKSALPWQQ
Ga0209789_1019374713300027624Marine Gutless Worms SymbiontSCMQHIHAEFGFEIGFVLSGNSSVTLLYTRDKEALP
Ga0209789_1019863313300027624Marine Gutless Worms SymbiontFGFEIGFVPSGNSYVTLPNTRDKGALLGQPILELKWL
Ga0209789_1023532223300027624Marine Gutless Worms SymbiontMQHIHAEFGFEIGFVLSGNSFVTLSYTRDKRPLPWQPML
Ga0209789_1030056513300027624Marine Gutless Worms SymbiontHAEFGFEIGFVLSGNSSLTLLYTRGKGALPWQPILGLKLL
Ga0209789_1033573613300027624Marine Gutless Worms SymbiontMQHIHAEFGFDIGFVPSGNSSMTLPYTRDKGALPWQP
Ga0209259_102620033300027658Marine Gutless Worms SymbiontMQHMHAEFGFEIGFVPSGNSSVTLPYTRDKGTLPWQPIL
Ga0209259_106793013300027658Marine Gutless Worms SymbiontRKRHIHAEFGFEIGFVPSGNSSVTLPYTRDKGALPWQPILGQKLL
Ga0209259_110992913300027658Marine Gutless Worms SymbiontFSCMQHIHAEIGSEIGFVLSGNSSVTLPYTRDKRVLPWQPILGP
Ga0209259_118781113300027658Marine Gutless Worms SymbiontHIHAEFGFEIGFVLSGNSSVTLPYTRDKGALPWQPILG
Ga0209259_130409513300027658Marine Gutless Worms SymbiontSCKRHIHAEFGFEIGFVPSGNSYVTLPYTRDKGALPWQPILGVKLL
Ga0209259_135346613300027658Marine Gutless Worms SymbiontMQHIRAEFGFEIGFVPSGNSSVTLPYTRNKGALPWQP
Ga0209259_135429513300027658Marine Gutless Worms SymbiontRAEFGFEIGFMLSWNSSVTLPYTRNKGALPWQPILGLKLL
Ga0209259_137579413300027658Marine Gutless Worms SymbiontQHIHAEFGFEMGFVLSGNSSLALPYTRDKAALPWQPILGQKLL
Ga0209259_141852923300027658Marine Gutless Worms SymbiontMQHIHAEFGFEIGFLLSGNSSVTLPYTRDKGALPWKP
Ga0209259_141923513300027658Marine Gutless Worms SymbiontMQHMRAEFGFETGIVLSGNSSLTLPYTRDKGALLW
Ga0209459_1006157623300027661Marine Gutless Worms SymbiontMRHSHAEFGFEIGFMLSGNLFVTLPYTRDKAGLPWQSIFELKLL
Ga0209459_1009556613300027661Marine Gutless Worms SymbiontFMRNIHTEFGFEIGFVPSGNSSVTLPYTRYKWALPWQPILGLKLL
Ga0209459_1023045013300027661Marine Gutless Worms SymbiontIHAEFGFEIGFVPSGYSSVTLPYTRDKGALPWQPILGQKLL
Ga0209459_1030551913300027661Marine Gutless Worms SymbiontAEFGFEIGFVPSGNSSVTLPYTRDKGALPWQPILGLKLL
Ga0209459_1038713613300027661Marine Gutless Worms SymbiontAEFGFEIGFVPSGNTSVTLPYTRDNGALPWQPILGQKLL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.