NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F085106

Metagenome Family F085106

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F085106
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 55 residues
Representative Sequence MIEDKELGVKIAENSDEKFWTETKEKCEEAIKAEKRNIKINEKLIELCKKELS
Number of Associated Samples 58
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 67.57 %
% of genes near scaffold ends (potentially truncated) 13.51 %
% of genes from short scaffolds (< 2000 bps) 81.08 %
Associated GOLD sequencing projects 54
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (63.964 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake
(16.216 % of family members)
Environment Ontology (ENVO) Unclassified
(19.820 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Hypersaline (saline)
(27.928 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.21%    β-sheet: 7.41%    Coil/Unstructured: 49.38%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF09956DUF2190 4.50
PF03237Terminase_6N 3.60
PF13385Laminin_G_3 3.60
PF04860Phage_portal 0.90



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A63.96 %
All OrganismsrootAll Organisms36.04 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918008|ConsensusfromContig346624Not Available1029Open in IMG/M
3300004186|Ga0066647_10515285Not Available505Open in IMG/M
3300005077|Ga0071116_1118837All Organisms → Viruses → Predicted Viral1306Open in IMG/M
3300005915|Ga0075122_10004371Not Available8556Open in IMG/M
3300005915|Ga0075122_10158266Not Available826Open in IMG/M
3300005918|Ga0075116_10018296All Organisms → Viruses → Predicted Viral3033Open in IMG/M
3300005918|Ga0075116_10279705Not Available611Open in IMG/M
3300005918|Ga0075116_10335059Not Available545Open in IMG/M
3300005935|Ga0075125_10017476All Organisms → Viruses → Predicted Viral3373Open in IMG/M
3300005935|Ga0075125_10027794All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2624Open in IMG/M
3300005935|Ga0075125_10031373All Organisms → Viruses → Predicted Viral2453Open in IMG/M
3300005935|Ga0075125_10061854All Organisms → Viruses → Predicted Viral1659Open in IMG/M
3300005935|Ga0075125_10080657All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1421Open in IMG/M
3300005935|Ga0075125_10099998All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300005935|Ga0075125_10136985Not Available1037Open in IMG/M
3300005935|Ga0075125_10299495All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300005935|Ga0075125_10351050Not Available576Open in IMG/M
3300005936|Ga0075124_10352639Not Available517Open in IMG/M
3300008450|Ga0114880_1082995Not Available1274Open in IMG/M
3300009149|Ga0114918_10104059All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1759Open in IMG/M
3300009149|Ga0114918_10177293Not Available1253Open in IMG/M
3300009149|Ga0114918_10181634All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1234Open in IMG/M
3300009149|Ga0114918_10231962Not Available1057Open in IMG/M
3300009149|Ga0114918_10244509All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1023Open in IMG/M
3300009149|Ga0114918_10262979Not Available977Open in IMG/M
3300009149|Ga0114918_10414605Not Available732Open in IMG/M
3300009149|Ga0114918_10438799Not Available706Open in IMG/M
3300009149|Ga0114918_10571118Not Available600Open in IMG/M
3300009149|Ga0114918_10661689Not Available549Open in IMG/M
3300009149|Ga0114918_10684869Not Available538Open in IMG/M
3300009149|Ga0114918_10750667Not Available510Open in IMG/M
3300009149|Ga0114918_10758122Not Available507Open in IMG/M
3300009167|Ga0113563_13190657Not Available555Open in IMG/M
3300009529|Ga0114919_10209229Not Available1388Open in IMG/M
3300010330|Ga0136651_10253754Not Available884Open in IMG/M
3300010344|Ga0116243_10047694All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium3710Open in IMG/M
3300010351|Ga0116248_10097330All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium2659Open in IMG/M
3300010365|Ga0116251_10044529All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium3494Open in IMG/M
3300013098|Ga0164320_10036404All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1966Open in IMG/M
(restricted) 3300013127|Ga0172365_10164644Not Available1375Open in IMG/M
(restricted) 3300013129|Ga0172364_10214570All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1286Open in IMG/M
(restricted) 3300013130|Ga0172363_10239752Not Available1215Open in IMG/M
(restricted) 3300013133|Ga0172362_10154675All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1692Open in IMG/M
(restricted) 3300013133|Ga0172362_10487007Not Available848Open in IMG/M
(restricted) 3300013133|Ga0172362_10881955Not Available593Open in IMG/M
(restricted) 3300013133|Ga0172362_10975968Not Available559Open in IMG/M
3300014204|Ga0172381_10260892All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1382Open in IMG/M
3300014204|Ga0172381_10355003Not Available1154Open in IMG/M
3300014204|Ga0172381_11395405Not Available505Open in IMG/M
3300014300|Ga0075321_1015587All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1125Open in IMG/M
3300014656|Ga0180007_10010432All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium8238Open in IMG/M
3300014656|Ga0180007_10011565Not Available7695Open in IMG/M
3300014656|Ga0180007_10815162Not Available550Open in IMG/M
3300017987|Ga0180431_10811100Not Available625Open in IMG/M
3300017989|Ga0180432_10895867Not Available609Open in IMG/M
3300022821|Ga0222673_1028755Not Available750Open in IMG/M
3300022874|Ga0222685_1042572All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium858Open in IMG/M
3300022874|Ga0222685_1045461Not Available824Open in IMG/M
3300022890|Ga0222667_1020835Not Available1400Open in IMG/M
3300023061|Ga0222700_1003744All Organisms → Viruses → Predicted Viral2931Open in IMG/M
3300023257|Ga0222658_1053527Not Available891Open in IMG/M
3300023257|Ga0222658_1103459Not Available555Open in IMG/M
3300023257|Ga0222658_1106217Not Available546Open in IMG/M
3300024262|Ga0210003_1382037Not Available516Open in IMG/M
3300025697|Ga0208769_1166213Not Available612Open in IMG/M
3300025713|Ga0208195_1039010All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium2111Open in IMG/M
3300025714|Ga0208458_1190615Not Available651Open in IMG/M
3300025720|Ga0208197_1046891Not Available1791Open in IMG/M
3300025736|Ga0207997_1032465All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2025Open in IMG/M
3300025736|Ga0207997_1046787Not Available1598Open in IMG/M
3300025736|Ga0207997_1048396All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1564Open in IMG/M
3300025736|Ga0207997_1154574Not Available722Open in IMG/M
3300025736|Ga0207997_1174962Not Available663Open in IMG/M
3300025740|Ga0208940_1203227Not Available639Open in IMG/M
3300025896|Ga0208916_10102098Not Available1214Open in IMG/M
(restricted) 3300027861|Ga0233415_10121364Not Available1167Open in IMG/M
(restricted) 3300027861|Ga0233415_10247157Not Available833Open in IMG/M
(restricted) 3300027995|Ga0233418_10037801Not Available1301Open in IMG/M
(restricted) 3300027996|Ga0233413_10138238All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1003Open in IMG/M
3300028920|Ga0272441_10215877Not Available1707Open in IMG/M
3300029288|Ga0265297_10047811All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium3823Open in IMG/M
3300029288|Ga0265297_10082035All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2644Open in IMG/M
3300029288|Ga0265297_10536025Not Available757Open in IMG/M
3300031227|Ga0307928_10024033All Organisms → Viruses → Predicted Viral4145Open in IMG/M
3300031227|Ga0307928_10029381Not Available3678Open in IMG/M
3300031227|Ga0307928_10108322All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1615Open in IMG/M
3300031227|Ga0307928_10110026Not Available1598Open in IMG/M
3300031227|Ga0307928_10116612All Organisms → Viruses → Predicted Viral1539Open in IMG/M
3300031227|Ga0307928_10128217All Organisms → Viruses → Predicted Viral1444Open in IMG/M
3300031227|Ga0307928_10338097Not Available729Open in IMG/M
3300031227|Ga0307928_10343816Not Available720Open in IMG/M
3300031227|Ga0307928_10471345Not Available568Open in IMG/M
3300031278|Ga0307431_1047388All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1265Open in IMG/M
3300031368|Ga0307429_1055006All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1214Open in IMG/M
3300031379|Ga0307434_1028449All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1873Open in IMG/M
3300031539|Ga0307380_10666686Not Available883Open in IMG/M
3300031565|Ga0307379_11347330Not Available580Open in IMG/M
3300031578|Ga0307376_10720002Not Available624Open in IMG/M
3300031578|Ga0307376_10750076Not Available608Open in IMG/M
3300031601|Ga0307992_1209616Not Available719Open in IMG/M
3300031772|Ga0315288_10011269Not Available11259Open in IMG/M
3300031772|Ga0315288_10127950All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2860Open in IMG/M
3300031997|Ga0315278_10547388All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1188Open in IMG/M
3300031999|Ga0315274_11354879All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium689Open in IMG/M
3300031999|Ga0315274_12044342Not Available513Open in IMG/M
3300032053|Ga0315284_10370809All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1777Open in IMG/M
3300032053|Ga0315284_10532097Not Available1419Open in IMG/M
3300032397|Ga0315287_12909742Not Available504Open in IMG/M
3300032516|Ga0315273_10036130Not Available6618Open in IMG/M
3300032516|Ga0315273_11473403Not Available839Open in IMG/M
3300033485|Ga0316626_10007363Not Available5996Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment16.22%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake16.22%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water15.32%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface13.51%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge6.31%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate5.41%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater3.60%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil3.60%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.70%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.70%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake1.80%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.80%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.90%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.90%
SinkholeEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Sinkhole0.90%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.90%
Marine SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment0.90%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.90%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.90%
Marine Hydrothermal VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent0.90%
Lake WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Lake Water0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.90%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.90%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
3300004186Groundwater microbial communities from aquifer - Crystal Geyser CG18_big_fil_WC_8/21/14_2.50EnvironmentalOpen in IMG/M
3300005077Water filled karst sinkhole microbial communities from Little Salt Spring, North Port, Florida - Phototrophic mat 2014EnvironmentalOpen in IMG/M
3300005915Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKBEnvironmentalOpen in IMG/M
3300005918Saline lake microbial communities from Ace Lake, Antarctica- Antarctic Ace Lake Metagenome 02UKCEnvironmentalOpen in IMG/M
3300005935Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKNEnvironmentalOpen in IMG/M
3300005936Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKSEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009529Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaGEnvironmentalOpen in IMG/M
3300010330Marine hydrothermal vent microbial communities from Guaymas Basin, Gulf of California to study Microbial Dark Matter (Phase II) - Marker 14 Mat core 4569-2 3-6 cm metaGEnvironmentalOpen in IMG/M
3300010344AD_JPAScaEngineeredOpen in IMG/M
3300010351AD_USPNcaEngineeredOpen in IMG/M
3300010365AD_USDIcaEngineeredOpen in IMG/M
3300013098Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cmEnvironmentalOpen in IMG/M
3300013127 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cmEnvironmentalOpen in IMG/M
3300013129 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cmEnvironmentalOpen in IMG/M
3300013130 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2EnvironmentalOpen in IMG/M
3300013133 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2EnvironmentalOpen in IMG/M
3300014204Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaGEngineeredOpen in IMG/M
3300014300Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1EnvironmentalOpen in IMG/M
3300014656Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaGEnvironmentalOpen in IMG/M
3300017987Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaGEnvironmentalOpen in IMG/M
3300017989Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaGEnvironmentalOpen in IMG/M
3300022821Saline water microbial communities from Ace Lake, Antarctica - #801EnvironmentalOpen in IMG/M
3300022874Saline water microbial communities from Ace Lake, Antarctica - #1077EnvironmentalOpen in IMG/M
3300022890Saline water microbial communities from Ace Lake, Antarctica - #657EnvironmentalOpen in IMG/M
3300023061Saline water microbial communities from Ace Lake, Antarctica - #1454EnvironmentalOpen in IMG/M
3300023257Saline water microbial communities from Ace Lake, Antarctica - #476EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025697Saline lake microbial communities from Ace Lake, Antarctica- Antarctic Ace Lake Metagenome 02UKC (SPAdes)EnvironmentalOpen in IMG/M
3300025713Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025714Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025720Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025736Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN (SPAdes)EnvironmentalOpen in IMG/M
3300025740Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA6_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300027995 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MGEnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300028920Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Prop-6NEnvironmentalOpen in IMG/M
3300029288Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91EngineeredOpen in IMG/M
3300031227Saline water microbial communities from Ace Lake, Antarctica - #232EnvironmentalOpen in IMG/M
3300031278Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-170EnvironmentalOpen in IMG/M
3300031368Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-230EnvironmentalOpen in IMG/M
3300031379Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-220EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031601Marine microbial communities from Ellis Fjord, Antarctic Ocean - #133EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Bog_all_C_040691302140918008SoilMERLKMIEDKELGLKISENSDETFWTETKEKCLEAVAAEHRNLKINETMIALCDKQLKLSGSPGK
Ga0066647_1051528513300004186GroundwaterLIENKELGVKIAEDSSESFWIETKEKCLEAIKAEERNLKINKKMIELCEQ
Ga0071116_111883723300005077SinkholeMIENEELGLKIAETTDEAFWTETKEKCEQAILAEERNLKINKTIIALCEEQLKCT*
Ga0075122_1000437163300005915Saline LakeMIENHALGIKVAENTDEKFWTDTKEKCEEAIKSENRNIEINKVLIKLCEKQLS*
Ga0075122_1015826613300005915Saline LakeMIENKELGIKIAENTNESFWTDMKEKCEQAIESEKRNLKINRQMIELCEKELS*
Ga0075116_1001829623300005918Saline LakeMIENHGLGIKVAENTDESFWTETKEKCEEAIKSENRNIEINKVLIKLCEKQLS*
Ga0075116_1027970523300005918Saline LakeMEINKELGIKVAENTDEKFWTDTREKCVEAIAAEYRNLKINEKMMVLCDEELKLFGKPNNKKI*
Ga0075116_1033505923300005918Saline LakeKMIEDKELGLKVAETTDESFWTETKEKCEEAIAAEERNLKINHRMIELCDEELKLFG*
Ga0075125_1001747643300005935Saline LakeMIEDKELGLKVAETTDESFWTETKEKCEEAIAAEERNLKINHRMIELCDEELKLFA*
Ga0075125_1002779433300005935Saline LakeMIEDEKLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLALCTKELS*
Ga0075125_1003137323300005935Saline LakeMMENKELGVKIAEDTDEAFWTDTKEKCEEALKAEARNIKINEKMLELCVDELK*
Ga0075125_1006185433300005935Saline LakeMIENKELGVKIAETTDESFWTETKEKCEKAIEAEERNLKINQKMIELCDKELS*
Ga0075125_1008065723300005935Saline LakeMIEEKELGVKIAENTDEKFWAEMKEKCTEAIKAEERNTKINKKMIQLADEELTK*
Ga0075125_1009999813300005935Saline LakeMIENKELGVKIAETTDESFWTDTKEKCLKAIDAENRNIKINQTMLALCEEELK*
Ga0075125_1013698523300005935Saline LakeMIEDKELGLKVSENSDETFWLETKEKCLEAIKAENRNLMINKKMLELCEEELN*
Ga0075125_1029949523300005935Saline LakeMIEDEKLGVKIAEDTDEEFWINTKEKCLKAIDAEERNLKINRTMITLCEEQLS*
Ga0075125_1035105023300005935Saline LakeMIENKELGVKIAETTDESFWEDTKEKCLKAIEAENRNIKINQTMLALCKKELS*
Ga0075124_1035263913300005936Lake WaterELGVKIAETTDESFWTDTKEKCLKAIEAENRNIKINQTMLALCKKELS*
Ga0114880_108299543300008450Freshwater LakeMLENEELGVKIAENTDEVFWSETKEKCEEAIKAEKRNIKINKKMIELCDEQLKLFGKPNK
Ga0114918_1010405943300009149Deep SubsurfaceMIEDEKLGLKIAENSDEKFWTETKEKCEEAIETEKRNLKINHRMLELCEEELKK*
Ga0114918_1017729353300009149Deep SubsurfaceMIENEDLGVKIAENTDEAFWTDTKKKCEDAIAAEERNLKINHKMLELCEKELS*
Ga0114918_1018163443300009149Deep SubsurfaceFKMIENEELGLKIAENSDEKFWTETKEKCSEAIAAEERNLKINHRMIEL*
Ga0114918_1023196233300009149Deep SubsurfaceMIENKELGVKIAENTDEKFWAETKEKCEEAIKSEERNIKINEVLIELCKKQLS*
Ga0114918_1024450933300009149Deep SubsurfaceMQENKELGIKIAENTDEAFWEDMKDKCEEALKAETRNIKINEHMLKLAKEELK*
Ga0114918_1026297933300009149Deep SubsurfaceMIENEELGLKIAENTDEQFWTETKEKCNQAIAAEHRNLKINEKMLGLCEEELKKLAD*
Ga0114918_1041460523300009149Deep SubsurfaceMIENEELGVKVAENTDEEFWTNTKEKCIEAIAAEERNLKINRTMIKLCEENLK*
Ga0114918_1043879933300009149Deep SubsurfaceMIEDEKLGLKISENSDETFWTETKEKCEEAIKAEERNLKINHRLLKLCDEELK*
Ga0114918_1057111823300009149Deep SubsurfaceVKIAVDSNEAFWAEQKENIIKANEAEARNAKIRANMLALCEKELK*
Ga0114918_1066168923300009149Deep SubsurfaceMIENKELGVKVSESSDETFWTETKQKCLEAIEAEKRNLKINEKMLQLCEEELKLFG*
Ga0114918_1068486923300009149Deep SubsurfaceMIENEELGVKIAEDANEVFWTETKEKCLSAIDAEHRNLKINKKMIELCDEQLSLFGMPDN
Ga0114918_1075066713300009149Deep SubsurfaceMIEDEKLGIKIAETTDESFWTETKEKCEKAIEAEERNLKINKRMIELCEEELKR*
Ga0114918_1075812223300009149Deep SubsurfaceMIEDKKLGLKVAENTDEKFWTETKEKCEEALKVEARNIKINQKMKELCEEQLS*
Ga0113563_1319065713300009167Freshwater WetlandsMIEEKSRSMKIAESSDEEFWTETRQKCEEALKAEARNQKINQVILELCKRELSSNA*
Ga0114919_1020922923300009529Deep SubsurfaceMIEDKKLGIKIAEDTDEKFWTETKEKCEEAIKAEHRNIKINEVLIKLCEKQLS*
Ga0136651_1025375433300010330Marine Hydrothermal VentMIENKELGVKIAETTDESFWTEQKEQIIKANEAEARNAKIRAMMLELCEKELN*
Ga0116243_1004769463300010344Anaerobic Digestor SludgeMIEDEELGLKIAESSDEAYWHELKNKCIKAIEAEERNLKINKRMIELCDEQLKIITSYVG
Ga0116248_1009733063300010351Anaerobic Digestor SludgeMIEDEELGLKIAENSDEAYWTELKEKCTKAIETAERNIKVDKKVIELCDIELKNITSYVD
Ga0116251_1004452933300010365Anaerobic Digestor SludgeMIEDEELGLKIAENSDEAYWTELKEKCTKAIETAERNIKVDKKVIELCDIELKIITSYVG
Ga0164320_1003640423300013098Marine SedimentMEKIEGIAEIAENTDEVFWIETKKKCVDATAAEQRNLKINETMIALCDEQLKLFGEPNR*
(restricted) Ga0172365_1016464453300013127SedimentMIEEKELGLKIAENTDEAFWTETKQKCMEAIAAEERNLKINKRIIELCNEQLKA*
(restricted) Ga0172364_1021457033300013129SedimentMIEEKELGLKIAENTDEAFWTETKQKCMEAIAAEERNLKINHRIIELCNEQLKA*
(restricted) Ga0172363_1023975233300013130SedimentMIENEELGLKIAENTDEAFWTETKKKCEDAIAAEERNMKINKKMIELCEEQLKTFHSYVG
(restricted) Ga0172362_1015467543300013133SedimentMIENEELGLKIAENTDEAFWAETKKKCEDAIAAEERNMKINKKMIELCEEQLKTFHSYVG
(restricted) Ga0172362_1048700743300013133SedimentMIEDEKLGLKIAEDSDEAFWTDTKEKCEKAIEAEKRNIKINEVLIKLCQE
(restricted) Ga0172362_1088195523300013133SedimentMIEDKSLGLKIAENTDEAFWTETLQKCKEAILAEERNLKINRSIIALCELQLKKD*
(restricted) Ga0172362_1097596833300013133SedimentMIEEKELGLKIAENTDEAFWTETKQKCTEAIAAEERNLKINKVLIELCEQQLKLFG*
Ga0172381_1026089243300014204Landfill LeachateMIENKDLGVKIAENQDEVFWTETKEKCQEAIKAETRNIEINKKIIELCDEQIKKLDL*
Ga0172381_1035500323300014204Landfill LeachateMIEDAELGLKIAENSDEAYWHELKEKCIKAIETAERNIKVDKKVIELCEIELKNITSYIG
Ga0172381_1139540513300014204Landfill LeachateMIEDKDLGIEIAENTDEKFWTETKEKCQETIKAEIRNIKVNNKIISLCDEELNKFTK*
Ga0075321_101558723300014300Natural And Restored WetlandsMIEDEKLGLKIAENSDEKFWTETREKCIEAVAVEERNLKINKRMIELCEQELEKDI*
Ga0180007_10010432103300014656GroundwaterMIEDKKLGLKVAENTDEMFWEETKEKCLDAIKVEHRNLKINEKLLELCKEQLKLFG*
Ga0180007_10011565103300014656GroundwaterMNEIKELGVKIAENTDEKFFTDLKEKCEEALKAEERNIKINNKMLELCKEELS*
Ga0180007_1081516223300014656GroundwaterMIEDKKLGLKVAENTDEKFWEETKEKCLDAIKAEHRNIKINEKLLELCKEQLKLFG*
Ga0180431_1081110023300017987Hypersaline Lake SedimentMIDDEEMGLKVAEDSEEKFWIETKEKCEEGIKSAKRNLKINEELLKLAKKELREFS
Ga0180432_1089586723300017989Hypersaline Lake SedimentMIDDEEMGLKVAEDSEEKFWIETKEKCEEGIKSAKRNLKINEGLLKLAKKELREFS
Ga0222673_102875523300022821Saline WaterMIENHGLGIKVAENTDESFWTETKEKCEEAIKSENRNIEINKVLIKLCEKQLS
Ga0222685_104257233300022874Saline WaterMMENKELGVKIAEDTDEAFWTDTKEKCEEALKAEARNIKINEKMLELCVDELK
Ga0222685_104546123300022874Saline WaterMIEDKELGLKVSENSDETFWLETKEKCLEAIKAENRNLMINKKMLELCEEELN
Ga0222667_102083513300022890Saline WaterMIENHALGIKVAENTDEKFWTDTKEKCEEAIKSENRNIEINKVLIKLCEKQLS
Ga0222700_100374453300023061Saline WaterMENKELGVKIAEDTDEEFWADTKEKCEEALKAEARNIKINEKMLELCVDELK
Ga0222658_105352723300023257Saline WaterMIEDKELGLKVAETTDESFWTETKEKCEEAIKAEKRNLKINETMIELCDDELKK
Ga0222658_110345923300023257Saline WaterSHVWENEQMIENHGLGIKVAENTDESFWTETKEKCEEAIKSENRNIEINKVLIKLCEKQL
Ga0222658_110621713300023257Saline WaterMLEDKELGVKIAETTDEAFWTETKEKCLQAISAEERNLKINKTMIALCDEQIKGKV
Ga0210003_138203723300024262Deep SubsurfaceMIEDEKLGLKIAENSDEKFWTETKEKCEEAIETEKRNLKINHRMLELCEEELKK
Ga0208769_116621323300025697Saline LakeMEINKELGIKVAENTDEKFWTDTREKCVEAIAAEYRNLKINEKMMVLCDEELKLFGKPNNKKI
Ga0208195_103901063300025713Anaerobic Digestor SludgeMIEDEELGLKIAENSDEAYWTELKEKCTKAIETAERNIKVDKKVIELCDIELKNITSYVG
Ga0208458_119061513300025714Anaerobic Digestor SludgeMIEDEELGLKIAENSDEAYWTELKEKCTKAIETAERNIKVDKKVIELCDIELK
Ga0208197_104689153300025720Anaerobic Digestor SludgeMIEDEELGLKIAENSDEAYWHELKEKCIKAIEAEERNLKINKRMIELCEEQLKIITSYVG
Ga0207997_103246533300025736Saline LakeMIENKELGVKIAETTDESFWTDTKEKCLKAIDAENRNIKINQTMLALCEEELK
Ga0207997_104678733300025736Saline LakeMIEDKELGLKVAETTDESFWTETKEKCEEAIAAEERNLKINHRMIELCDEELKLFA
Ga0207997_104839623300025736Saline LakeMIEDEKLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLALCTKELS
Ga0207997_115457423300025736Saline LakeMIEEKELGVKIAENTDEKFWAEMKEKCTEAIKAEERNTKINKKMIQLADEELTK
Ga0207997_117496223300025736Saline LakeMIENKELGVKIAETTDESFWTETKEKCEKAIEAEERNLKINQKMIELCDKELS
Ga0208940_120322723300025740Anaerobic Digestor SludgeMIEDEELGLKIAESSDEAYWHELKEKCIKAIEAEERNLKINKRMIELCEEQLKIITSYVG
Ga0208916_1010209853300025896AqueousMIEDEELGLKIAENSDEAYWHELKEKCIKAIEAEERNLKINKRMIELCEEQLKIITSYVD
(restricted) Ga0233415_1012136413300027861SeawaterMIEDEELGVKIAETSDESFWTETKEKCTEALQAEKRNQKINEKMLELCNEELK
(restricted) Ga0233415_1024715723300027861SeawaterMIEDKELGVKIAETTDESFWTETQEKCLKAIEAEKRNMKINEKMLELCKKELS
(restricted) Ga0233418_1003780113300027995SedimentMEINNDLGIKIAENDDEKFWIETKEKCLEAIAAEKRNLKINKKILSLCKKELKLFGKPKK
(restricted) Ga0233413_1013823833300027996SeawaterMIEDKELGVKIAETTDEAFWTETKEKCLQAIDTENRNIKINEQMLKLCEQELKAHT
Ga0272441_1021587713300028920Marine SedimentMIENEELGLKIAENTDEAFWTDTKEKCEKAIEAEKRNIKINQRLIGLCDEELK
Ga0265297_1004781143300029288Landfill LeachateMIEDEKLGLKIAENSDEKFWTETKEKCEEGIKSAKRNILLDEKLIELCNEQLKKPTSYIS
Ga0265297_1008203543300029288Landfill LeachateMIEDEKLGLKIAENTDEKFWTETKEKCEEGIKSAKRNILLDEKLIELCDEQLKKFTSYIN
Ga0265297_1053602523300029288Landfill LeachateMIEDESLGLKIAENSDEKFWTETKEKCEEGIKSAERNILLDKKLIELCDEQLKKFTSYIS
Ga0307928_1002403353300031227Saline WaterMIENEELGVKIAETTDESFWTDTKEKCLKAIDAENRNIKINQTMLALCKKELS
Ga0307928_1002938153300031227Saline WaterMIENKELGVKIAETTDESFWEDTKEKCLKAIEAENRNIKINQTMLALCKKELS
Ga0307928_1010832233300031227Saline WaterMIEDKNLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLELCNKELS
Ga0307928_1011002613300031227Saline WaterMIEDEKLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLKLCIEELS
Ga0307928_1011661233300031227Saline WaterMIENKELGVKIAETTDESFWTEQKENLIKANEAEERNAKIRNNMLALCEKELS
Ga0307928_1012821733300031227Saline WaterMIENEELGVKIAETTDESFWTDTKEKCLKAIDAENRNIKINQTMLALCEEQLK
Ga0307928_1033809713300031227Saline WaterFRKDTSKMIEDEKLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLKLCIEELS
Ga0307928_1034381623300031227Saline WaterMIEDKELGVKIAENTDEEFWTNTKQKCEDAIDAEERNLKINQTMIKLCEEQLK
Ga0307928_1047134523300031227Saline WaterMIENEELGVKIAETTDESFWTEQKENLIKANEAEERNAKIRTTMLKLCNEQLKK
Ga0307431_104738843300031278Salt MarshMIEDKELGVKIAEDSDEKFWTETKEKCEEAIKAEKRNIKINEKLIELCKKELS
Ga0307429_105500633300031368Salt MarshMIEDKELGVKIAENSDEKFWTETKEKCEEAIKAEKRNIKINEKLIELCKKELS
Ga0307434_102844913300031379Salt MarshNKELGVKIAEDSDEKFWTETKEKCEEAIKAEKRNIKINEKLIELCKKELS
Ga0307380_1066668623300031539SoilMIEDKILGIKVAENTDEAFWTETKERCLEGIKAEERNLKINAKMLELCEEELKQLVGIPINERFK
Ga0307379_1134733013300031565SoilMIENEELGVKIAENTDEAFWTETKEKCETALKAEARNVKINEKMLELCKEELS
Ga0307376_1072000213300031578SoilVKIAENTDERFFTELKEKCEEALKSEARNIKINNKMIELCSEELK
Ga0307376_1075007623300031578SoilMIEDKKLGLKVAENSDEKFWTETKEKCEEALKVEARNIKINQKMKELCEEQLS
Ga0307992_120961613300031601MarineMIENKELGIKVAENTDEEFWTETKQKCLDAIAAENRNIKINQTMLKLCEEQLK
Ga0315288_10011269103300031772SedimentMIENKELGIKIAEDSNEKFWVETLEKCTEAIATEERNLKINHKILELCKQELQK
Ga0315288_1012795043300031772SedimentMIEDVGLGLKIAENPDEVFWTETKEKCSEAIAAEERNLKINRRLIELCEEQLKDFKKE
Ga0315278_1054738843300031997SedimentMIEDKDLGIKVAENSDEAFWTEQKEKCLEAIKAEERNLKINKRMIALCEEQLK
Ga0315274_1135487923300031999SedimentMIENEELGLKIAETTDEAFWTELKEKCLRAIDAENRNLKINERMIELCDKELEKK
Ga0315274_1204434223300031999SedimentMIENEELGLKIAETSEEKFFTELKEKCEEALEAENRNIKINKMMLELCKEELKDYAH
Ga0315284_1037080923300032053SedimentMIEDKELGIKIAENPDEAFWTETKEKCKDALAAEERNMKINKKMLELCEEELKCT
Ga0315284_1053209743300032053SedimentMIEDVGLGLKIAENLDEVFWTETKEKCSEAIAAEERNLKINRRLIELCEEQLKDFKKE
Ga0315287_1290974223300032397SedimentMIEDKSLGLKIAESSDEHFWIETKEKCLEAVDAEKRNIKINKAILKVCKRELKCI
Ga0315273_1003613093300032516SedimentMIENEELGLKIAETTDEAFWTELKEKCLRAIDAENRNLKINKRMIELCDKELEKK
Ga0315273_1147340333300032516SedimentMIENKELGVKIAENADEVFWRETKQKCQEAIKAEERNIKINGRLIALCEEEL
Ga0316626_1000736313300033485SoilMIENKELGLKIAENSDEVFWTELKEKCLDATKAEERNLKINSHMLKL


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