Metagenome Family F085106

Basic Information
Family ID	F085106
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	55 residues
Representative Sequence	MIEDKELGVKIAENSDEKFWTETKEKCEEAIKAEKRNIKINEKLIELCKKELS
Number of Associated Samples	58
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.57 %
% of genes near scaffold ends (potentially truncated)	13.51 %
% of genes from short scaffolds (< 2000 bps)	81.08 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (63.964 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (19.820 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Hypersaline (saline) (27.928 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1Bog_all_C_04069130 2Ga0066647_105152851 3Ga0071116_11188372 4Ga0075122_100043716 5Ga0075122_101582661 6Ga0075116_100182962 7Ga0075116_102797052 8Ga0075116_103350592 9Ga0075125_100174764 10Ga0075125_100277943 11Ga0075125_100313732 12Ga0075125_100618543 13Ga0075125_100806572 14Ga0075125_100999981 15Ga0075125_101369852 16Ga0075125_102994952 17Ga0075125_103510502 18Ga0075124_103526391 19Ga0114880_10829954 20Ga0114918_101040594 21Ga0114918_101772935 22Ga0114918_101816344 23Ga0114918_102319623 24Ga0114918_102445093 25Ga0114918_102629793 26Ga0114918_104146052 27Ga0114918_104387993 28Ga0114918_105711182 29Ga0114918_106616892 30Ga0114918_106848692 31Ga0114918_107506671 32Ga0114918_107581222 33Ga0113563_131906571 34Ga0114919_102092292 35Ga0136651_102537543 36Ga0116243_100476946 37Ga0116248_100973306 38Ga0116251_100445293 39Ga0164320_100364042 40Ga0172365_101646445 41Ga0172364_102145703 42Ga0172363_102397523 43Ga0172362_101546754 44Ga0172362_104870074 45Ga0172362_108819552 46Ga0172362_109759683 47Ga0172381_102608924 48Ga0172381_103550032 49Ga0172381_113954051 50Ga0075321_10155872 51Ga0180007_1001043210 52Ga0180007_1001156510 53Ga0180007_108151622 54Ga0180431_108111002 55Ga0180432_108958672 56Ga0222673_10287552 57Ga0222685_10425723 58Ga0222685_10454612 59Ga0222667_10208351 60Ga0222700_10037445 61Ga0222658_10535272 62Ga0222658_11034592 63Ga0222658_11062171 64Ga0210003_13820372 65Ga0208769_11662132 66Ga0208195_10390106 67Ga0208458_11906151 68Ga0208197_10468915 69Ga0207997_10324653 70Ga0207997_10467873 71Ga0207997_10483962 72Ga0207997_11545742 73Ga0207997_11749622 74Ga0208940_12032272 75Ga0208916_101020985 76Ga0233415_101213641 77Ga0233415_102471572 78Ga0233418_100378011 79Ga0233413_101382383 80Ga0272441_102158771 81Ga0265297_100478114 82Ga0265297_100820354 83Ga0265297_105360252 84Ga0307928_100240335 85Ga0307928_100293815 86Ga0307928_101083223 87Ga0307928_101100261 88Ga0307928_101166123 89Ga0307928_101282173 90Ga0307928_103380971 91Ga0307928_103438162 92Ga0307928_104713452 93Ga0307431_10473884 94Ga0307429_10550063 95Ga0307434_10284491 96Ga0307380_106666862 97Ga0307379_113473301 98Ga0307376_107200021 99Ga0307376_107500762 100Ga0307992_12096161 101Ga0315288_1001126910 102Ga0315288_101279504 103Ga0315278_105473884 104Ga0315274_113548792 105Ga0315274_120443422 106Ga0315284_103708092 107Ga0315284_105320974 108Ga0315287_129097422 109Ga0315273_100361309 110Ga0315273_114734033 111Ga0316626_100073631
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1Bog_all_C_04069130 2Ga0066647_105152851 3Ga0071116_11188372 4Ga0075122_100043716 5Ga0075122_101582661 6Ga0075116_102797052 7Ga0075116_103350592 8Ga0075125_100277943 9Ga0075125_100806572 10Ga0075125_100999981 11Ga0075125_101369852 12Ga0075125_102994952 13Ga0114880_10829954 14Ga0114918_101772935 15Ga0114918_101816344 16Ga0114918_102445093 17Ga0114918_102629793 18Ga0114918_105711182 19Ga0113563_131906571 20Ga0136651_102537543 21Ga0116243_100476946 22Ga0164320_100364042 23Ga0172363_102397523 24Ga0172362_104870074 25Ga0172381_102608924 26Ga0172381_113954051 27Ga0075321_10155872 28Ga0180007_1001043210 29Ga0180007_1001156510 30Ga0180431_108111002 31Ga0208458_11906151 32Ga0233418_100378011 33Ga0265297_100478114 34Ga0307434_10284491 35Ga0307380_106666862 36Ga0307376_107200021 37Ga0315288_1001126910 38Ga0315288_101279504 39Ga0315274_113548792 40Ga0315274_120443422 41Ga0315284_103708092 42Ga0315287_129097422 43Ga0315273_114734033 44Ga0316626_100073631
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.21% β-sheet: 7.41% Coil/Unstructured: 49.38%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF09956	DUF2190	4.50
PF03237	Terminase_6N	3.60
PF13385	Laminin_G_3	3.60
PF04860	Phage_portal	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	36.04 %
Unclassified	root	N/A	63.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	27.93 %
Unclassified	root	N/A	63.96 %
Viruses	superkingdom	All Organisms → Viruses	8.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Unclassified	root	N/A	63.96 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.62 %
Unclassified	root	N/A	63.96 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	2.70 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.80 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	21.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Unclassified	root	N/A	63.96 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.70 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Unclassified	root	N/A	63.96 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	21.62 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.62 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Unclassified	root	N/A	63.96 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.62 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Unclassified	root	N/A	63.96 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	1.80 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.62 %
Parcubacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.11 %
Unclassified	root	N/A	63.96 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300013127\|Ga0172365_10164644	Not Available	1375	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10214570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1286	Open in IMG/M
(restricted) 3300013130\|Ga0172363_10239752	Not Available	1215	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10154675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1692	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10487007	Not Available	848	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10881955	Not Available	593	Open in IMG/M
(restricted) 3300013133\|Ga0172362_10975968	Not Available	559	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10121364	Not Available	1167	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10247157	Not Available	833	Open in IMG/M
(restricted) 3300027995\|Ga0233418_10037801	Not Available	1301	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	11.71%
Environmental	Environmental	88.29%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	81.98%
Solid Waste	Engineered → Solid Waste	5.41%
Terrestrial	Environmental → Terrestrial	6.31%
Wastewater	Engineered → Wastewater	6.31%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	6.31%
Freshwater	Environmental → Aquatic → Freshwater	22.52%
Landfill	Engineered → Solid Waste → Landfill	5.41%
Marine	Environmental → Aquatic → Marine	23.42%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	36.04%
Soil	Environmental → Terrestrial → Soil	6.31%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	3.60%
Coastal	Environmental → Aquatic → Marine → Coastal	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.60%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.80%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	1.80%
Inlet	Environmental → Aquatic → Marine → Inlet	2.70%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.70%
Lake	Environmental → Aquatic → Freshwater → Lake	17.12%
Oceanic	Environmental → Aquatic → Marine → Oceanic	13.51%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	34.23%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	6.31%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	16.22%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	13.51%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.80%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	1.80%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.90%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	34.23%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	6.31%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.60%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	6.31%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.90%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	13.51%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.90%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	3.60%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	1.80%
Lake Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Lake Water	0.90%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	5.41%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.90%
Marine Hydrothermal Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent	0.90%
Marine Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment	0.90%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	16.22%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.80%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	15.32%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.70%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	16.22%
Sinkhole	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Sinkhole	0.90%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300004186	Groundwater microbial communities from aquifer - Crystal Geyser CG18_big_fil_WC_8/21/14_2.50	Environmental	Open in IMG/M
3300005077	Water filled karst sinkhole microbial communities from Little Salt Spring, North Port, Florida - Phototrophic mat 2014	Environmental	Open in IMG/M
3300005915	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKB	Environmental	Open in IMG/M
3300005918	Saline lake microbial communities from Ace Lake, Antarctica- Antarctic Ace Lake Metagenome 02UKC	Environmental	Open in IMG/M
3300005935	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKN	Environmental	Open in IMG/M
3300005936	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKS	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_04069130	2140918008	Soil	MERLKMIEDKELGLKISENSDETFWTETKEKCLEAVAAEHRNLKINETMIALCDKQLKLSGSPGK
Ga0066647_105152851	3300004186	Groundwater	LIENKELGVKIAEDSSESFWIETKEKCLEAIKAEERNLKINKKMIELCEQ
Ga0071116_11188372	3300005077	Sinkhole	MIENEELGLKIAETTDEAFWTETKEKCEQAILAEERNLKINKTIIALCEEQLKCT*
Ga0075122_100043716	3300005915	Saline Lake	MIENHALGIKVAENTDEKFWTDTKEKCEEAIKSENRNIEINKVLIKLCEKQLS*
Ga0075122_101582661	3300005915	Saline Lake	MIENKELGIKIAENTNESFWTDMKEKCEQAIESEKRNLKINRQMIELCEKELS*
Ga0075116_100182962	3300005918	Saline Lake	MIENHGLGIKVAENTDESFWTETKEKCEEAIKSENRNIEINKVLIKLCEKQLS*
Ga0075116_102797052	3300005918	Saline Lake	MEINKELGIKVAENTDEKFWTDTREKCVEAIAAEYRNLKINEKMMVLCDEELKLFGKPNNKKI*
Ga0075116_103350592	3300005918	Saline Lake	KMIEDKELGLKVAETTDESFWTETKEKCEEAIAAEERNLKINHRMIELCDEELKLFG*
Ga0075125_100174764	3300005935	Saline Lake	MIEDKELGLKVAETTDESFWTETKEKCEEAIAAEERNLKINHRMIELCDEELKLFA*
Ga0075125_100277943	3300005935	Saline Lake	MIEDEKLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLALCTKELS*
Ga0075125_100313732	3300005935	Saline Lake	MMENKELGVKIAEDTDEAFWTDTKEKCEEALKAEARNIKINEKMLELCVDELK*
Ga0075125_100618543	3300005935	Saline Lake	MIENKELGVKIAETTDESFWTETKEKCEKAIEAEERNLKINQKMIELCDKELS*
Ga0075125_100806572	3300005935	Saline Lake	MIEEKELGVKIAENTDEKFWAEMKEKCTEAIKAEERNTKINKKMIQLADEELTK*
Ga0075125_100999981	3300005935	Saline Lake	MIENKELGVKIAETTDESFWTDTKEKCLKAIDAENRNIKINQTMLALCEEELK*
Ga0075125_101369852	3300005935	Saline Lake	MIEDKELGLKVSENSDETFWLETKEKCLEAIKAENRNLMINKKMLELCEEELN*
Ga0075125_102994952	3300005935	Saline Lake	MIEDEKLGVKIAEDTDEEFWINTKEKCLKAIDAEERNLKINRTMITLCEEQLS*
Ga0075125_103510502	3300005935	Saline Lake	MIENKELGVKIAETTDESFWEDTKEKCLKAIEAENRNIKINQTMLALCKKELS*
Ga0075124_103526391	3300005936	Lake Water	ELGVKIAETTDESFWTDTKEKCLKAIEAENRNIKINQTMLALCKKELS*
Ga0114880_10829954	3300008450	Freshwater Lake	MLENEELGVKIAENTDEVFWSETKEKCEEAIKAEKRNIKINKKMIELCDEQLKLFGKPNK
Ga0114918_101040594	3300009149	Deep Subsurface	MIEDEKLGLKIAENSDEKFWTETKEKCEEAIETEKRNLKINHRMLELCEEELKK*
Ga0114918_101772935	3300009149	Deep Subsurface	MIENEDLGVKIAENTDEAFWTDTKKKCEDAIAAEERNLKINHKMLELCEKELS*
Ga0114918_101816344	3300009149	Deep Subsurface	FKMIENEELGLKIAENSDEKFWTETKEKCSEAIAAEERNLKINHRMIEL*
Ga0114918_102319623	3300009149	Deep Subsurface	MIENKELGVKIAENTDEKFWAETKEKCEEAIKSEERNIKINEVLIELCKKQLS*
Ga0114918_102445093	3300009149	Deep Subsurface	MQENKELGIKIAENTDEAFWEDMKDKCEEALKAETRNIKINEHMLKLAKEELK*
Ga0114918_102629793	3300009149	Deep Subsurface	MIENEELGLKIAENTDEQFWTETKEKCNQAIAAEHRNLKINEKMLGLCEEELKKLAD*
Ga0114918_104146052	3300009149	Deep Subsurface	MIENEELGVKVAENTDEEFWTNTKEKCIEAIAAEERNLKINRTMIKLCEENLK*
Ga0114918_104387993	3300009149	Deep Subsurface	MIEDEKLGLKISENSDETFWTETKEKCEEAIKAEERNLKINHRLLKLCDEELK*
Ga0114918_105711182	3300009149	Deep Subsurface	VKIAVDSNEAFWAEQKENIIKANEAEARNAKIRANMLALCEKELK*
Ga0114918_106616892	3300009149	Deep Subsurface	MIENKELGVKVSESSDETFWTETKQKCLEAIEAEKRNLKINEKMLQLCEEELKLFG*
Ga0114918_106848692	3300009149	Deep Subsurface	MIENEELGVKIAEDANEVFWTETKEKCLSAIDAEHRNLKINKKMIELCDEQLSLFGMPDN
Ga0114918_107506671	3300009149	Deep Subsurface	MIEDEKLGIKIAETTDESFWTETKEKCEKAIEAEERNLKINKRMIELCEEELKR*
Ga0114918_107581222	3300009149	Deep Subsurface	MIEDKKLGLKVAENTDEKFWTETKEKCEEALKVEARNIKINQKMKELCEEQLS*
Ga0113563_131906571	3300009167	Freshwater Wetlands	MIEEKSRSMKIAESSDEEFWTETRQKCEEALKAEARNQKINQVILELCKRELSSNA*
Ga0114919_102092292	3300009529	Deep Subsurface	MIEDKKLGIKIAEDTDEKFWTETKEKCEEAIKAEHRNIKINEVLIKLCEKQLS*
Ga0136651_102537543	3300010330	Marine Hydrothermal Vent	MIENKELGVKIAETTDESFWTEQKEQIIKANEAEARNAKIRAMMLELCEKELN*
Ga0116243_100476946	3300010344	Anaerobic Digestor Sludge	MIEDEELGLKIAESSDEAYWHELKNKCIKAIEAEERNLKINKRMIELCDEQLKIITSYVG
Ga0116248_100973306	3300010351	Anaerobic Digestor Sludge	MIEDEELGLKIAENSDEAYWTELKEKCTKAIETAERNIKVDKKVIELCDIELKNITSYVD
Ga0116251_100445293	3300010365	Anaerobic Digestor Sludge	MIEDEELGLKIAENSDEAYWTELKEKCTKAIETAERNIKVDKKVIELCDIELKIITSYVG
Ga0164320_100364042	3300013098	Marine Sediment	MEKIEGIAEIAENTDEVFWIETKKKCVDATAAEQRNLKINETMIALCDEQLKLFGEPNR*
(restricted) Ga0172365_101646445	3300013127	Sediment	MIEEKELGLKIAENTDEAFWTETKQKCMEAIAAEERNLKINKRIIELCNEQLKA*
(restricted) Ga0172364_102145703	3300013129	Sediment	MIEEKELGLKIAENTDEAFWTETKQKCMEAIAAEERNLKINHRIIELCNEQLKA*
(restricted) Ga0172363_102397523	3300013130	Sediment	MIENEELGLKIAENTDEAFWTETKKKCEDAIAAEERNMKINKKMIELCEEQLKTFHSYVG
(restricted) Ga0172362_101546754	3300013133	Sediment	MIENEELGLKIAENTDEAFWAETKKKCEDAIAAEERNMKINKKMIELCEEQLKTFHSYVG
(restricted) Ga0172362_104870074	3300013133	Sediment	MIEDEKLGLKIAEDSDEAFWTDTKEKCEKAIEAEKRNIKINEVLIKLCQE
(restricted) Ga0172362_108819552	3300013133	Sediment	MIEDKSLGLKIAENTDEAFWTETLQKCKEAILAEERNLKINRSIIALCELQLKKD*
(restricted) Ga0172362_109759683	3300013133	Sediment	MIEEKELGLKIAENTDEAFWTETKQKCTEAIAAEERNLKINKVLIELCEQQLKLFG*
Ga0172381_102608924	3300014204	Landfill Leachate	MIENKDLGVKIAENQDEVFWTETKEKCQEAIKAETRNIEINKKIIELCDEQIKKLDL*
Ga0172381_103550032	3300014204	Landfill Leachate	MIEDAELGLKIAENSDEAYWHELKEKCIKAIETAERNIKVDKKVIELCEIELKNITSYIG
Ga0172381_113954051	3300014204	Landfill Leachate	MIEDKDLGIEIAENTDEKFWTETKEKCQETIKAEIRNIKVNNKIISLCDEELNKFTK*
Ga0075321_10155872	3300014300	Natural And Restored Wetlands	MIEDEKLGLKIAENSDEKFWTETREKCIEAVAVEERNLKINKRMIELCEQELEKDI*
Ga0180007_1001043210	3300014656	Groundwater	MIEDKKLGLKVAENTDEMFWEETKEKCLDAIKVEHRNLKINEKLLELCKEQLKLFG*
Ga0180007_1001156510	3300014656	Groundwater	MNEIKELGVKIAENTDEKFFTDLKEKCEEALKAEERNIKINNKMLELCKEELS*
Ga0180007_108151622	3300014656	Groundwater	MIEDKKLGLKVAENTDEKFWEETKEKCLDAIKAEHRNIKINEKLLELCKEQLKLFG*
Ga0180431_108111002	3300017987	Hypersaline Lake Sediment	MIDDEEMGLKVAEDSEEKFWIETKEKCEEGIKSAKRNLKINEELLKLAKKELREFS
Ga0180432_108958672	3300017989	Hypersaline Lake Sediment	MIDDEEMGLKVAEDSEEKFWIETKEKCEEGIKSAKRNLKINEGLLKLAKKELREFS
Ga0222673_10287552	3300022821	Saline Water	MIENHGLGIKVAENTDESFWTETKEKCEEAIKSENRNIEINKVLIKLCEKQLS
Ga0222685_10425723	3300022874	Saline Water	MMENKELGVKIAEDTDEAFWTDTKEKCEEALKAEARNIKINEKMLELCVDELK
Ga0222685_10454612	3300022874	Saline Water	MIEDKELGLKVSENSDETFWLETKEKCLEAIKAENRNLMINKKMLELCEEELN
Ga0222667_10208351	3300022890	Saline Water	MIENHALGIKVAENTDEKFWTDTKEKCEEAIKSENRNIEINKVLIKLCEKQLS
Ga0222700_10037445	3300023061	Saline Water	MENKELGVKIAEDTDEEFWADTKEKCEEALKAEARNIKINEKMLELCVDELK
Ga0222658_10535272	3300023257	Saline Water	MIEDKELGLKVAETTDESFWTETKEKCEEAIKAEKRNLKINETMIELCDDELKK
Ga0222658_11034592	3300023257	Saline Water	SHVWENEQMIENHGLGIKVAENTDESFWTETKEKCEEAIKSENRNIEINKVLIKLCEKQL
Ga0222658_11062171	3300023257	Saline Water	MLEDKELGVKIAETTDEAFWTETKEKCLQAISAEERNLKINKTMIALCDEQIKGKV
Ga0210003_13820372	3300024262	Deep Subsurface	MIEDEKLGLKIAENSDEKFWTETKEKCEEAIETEKRNLKINHRMLELCEEELKK
Ga0208769_11662132	3300025697	Saline Lake	MEINKELGIKVAENTDEKFWTDTREKCVEAIAAEYRNLKINEKMMVLCDEELKLFGKPNNKKI
Ga0208195_10390106	3300025713	Anaerobic Digestor Sludge	MIEDEELGLKIAENSDEAYWTELKEKCTKAIETAERNIKVDKKVIELCDIELKNITSYVG
Ga0208458_11906151	3300025714	Anaerobic Digestor Sludge	MIEDEELGLKIAENSDEAYWTELKEKCTKAIETAERNIKVDKKVIELCDIELK
Ga0208197_10468915	3300025720	Anaerobic Digestor Sludge	MIEDEELGLKIAENSDEAYWHELKEKCIKAIEAEERNLKINKRMIELCEEQLKIITSYVG
Ga0207997_10324653	3300025736	Saline Lake	MIENKELGVKIAETTDESFWTDTKEKCLKAIDAENRNIKINQTMLALCEEELK
Ga0207997_10467873	3300025736	Saline Lake	MIEDKELGLKVAETTDESFWTETKEKCEEAIAAEERNLKINHRMIELCDEELKLFA
Ga0207997_10483962	3300025736	Saline Lake	MIEDEKLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLALCTKELS
Ga0207997_11545742	3300025736	Saline Lake	MIEEKELGVKIAENTDEKFWAEMKEKCTEAIKAEERNTKINKKMIQLADEELTK
Ga0207997_11749622	3300025736	Saline Lake	MIENKELGVKIAETTDESFWTETKEKCEKAIEAEERNLKINQKMIELCDKELS
Ga0208940_12032272	3300025740	Anaerobic Digestor Sludge	MIEDEELGLKIAESSDEAYWHELKEKCIKAIEAEERNLKINKRMIELCEEQLKIITSYVG
Ga0208916_101020985	3300025896	Aqueous	MIEDEELGLKIAENSDEAYWHELKEKCIKAIEAEERNLKINKRMIELCEEQLKIITSYVD
(restricted) Ga0233415_101213641	3300027861	Seawater	MIEDEELGVKIAETSDESFWTETKEKCTEALQAEKRNQKINEKMLELCNEELK
(restricted) Ga0233415_102471572	3300027861	Seawater	MIEDKELGVKIAETTDESFWTETQEKCLKAIEAEKRNMKINEKMLELCKKELS
(restricted) Ga0233418_100378011	3300027995	Sediment	MEINNDLGIKIAENDDEKFWIETKEKCLEAIAAEKRNLKINKKILSLCKKELKLFGKPKK
(restricted) Ga0233413_101382383	3300027996	Seawater	MIEDKELGVKIAETTDEAFWTETKEKCLQAIDTENRNIKINEQMLKLCEQELKAHT
Ga0272441_102158771	3300028920	Marine Sediment	MIENEELGLKIAENTDEAFWTDTKEKCEKAIEAEKRNIKINQRLIGLCDEELK
Ga0265297_100478114	3300029288	Landfill Leachate	MIEDEKLGLKIAENSDEKFWTETKEKCEEGIKSAKRNILLDEKLIELCNEQLKKPTSYIS
Ga0265297_100820354	3300029288	Landfill Leachate	MIEDEKLGLKIAENTDEKFWTETKEKCEEGIKSAKRNILLDEKLIELCDEQLKKFTSYIN
Ga0265297_105360252	3300029288	Landfill Leachate	MIEDESLGLKIAENSDEKFWTETKEKCEEGIKSAERNILLDKKLIELCDEQLKKFTSYIS
Ga0307928_100240335	3300031227	Saline Water	MIENEELGVKIAETTDESFWTDTKEKCLKAIDAENRNIKINQTMLALCKKELS
Ga0307928_100293815	3300031227	Saline Water	MIENKELGVKIAETTDESFWEDTKEKCLKAIEAENRNIKINQTMLALCKKELS
Ga0307928_101083223	3300031227	Saline Water	MIEDKNLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLELCNKELS
Ga0307928_101100261	3300031227	Saline Water	MIEDEKLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLKLCIEELS
Ga0307928_101166123	3300031227	Saline Water	MIENKELGVKIAETTDESFWTEQKENLIKANEAEERNAKIRNNMLALCEKELS
Ga0307928_101282173	3300031227	Saline Water	MIENEELGVKIAETTDESFWTDTKEKCLKAIDAENRNIKINQTMLALCEEQLK
Ga0307928_103380971	3300031227	Saline Water	FRKDTSKMIEDEKLGIKIAENSDEKFWTETKEKCEEALKAEARNIKINEKMLKLCIEELS
Ga0307928_103438162	3300031227	Saline Water	MIEDKELGVKIAENTDEEFWTNTKQKCEDAIDAEERNLKINQTMIKLCEEQLK
Ga0307928_104713452	3300031227	Saline Water	MIENEELGVKIAETTDESFWTEQKENLIKANEAEERNAKIRTTMLKLCNEQLKK
Ga0307431_10473884	3300031278	Salt Marsh	MIEDKELGVKIAEDSDEKFWTETKEKCEEAIKAEKRNIKINEKLIELCKKELS
Ga0307429_10550063	3300031368	Salt Marsh	MIEDKELGVKIAENSDEKFWTETKEKCEEAIKAEKRNIKINEKLIELCKKELS
Ga0307434_10284491	3300031379	Salt Marsh	NKELGVKIAEDSDEKFWTETKEKCEEAIKAEKRNIKINEKLIELCKKELS
Ga0307380_106666862	3300031539	Soil	MIEDKILGIKVAENTDEAFWTETKERCLEGIKAEERNLKINAKMLELCEEELKQLVGIPINERFK
Ga0307379_113473301	3300031565	Soil	MIENEELGVKIAENTDEAFWTETKEKCETALKAEARNVKINEKMLELCKEELS
Ga0307376_107200021	3300031578	Soil	VKIAENTDERFFTELKEKCEEALKSEARNIKINNKMIELCSEELK
Ga0307376_107500762	3300031578	Soil	MIEDKKLGLKVAENSDEKFWTETKEKCEEALKVEARNIKINQKMKELCEEQLS
Ga0307992_12096161	3300031601	Marine	MIENKELGIKVAENTDEEFWTETKQKCLDAIAAENRNIKINQTMLKLCEEQLK
Ga0315288_1001126910	3300031772	Sediment	MIENKELGIKIAEDSNEKFWVETLEKCTEAIATEERNLKINHKILELCKQELQK
Ga0315288_101279504	3300031772	Sediment	MIEDVGLGLKIAENPDEVFWTETKEKCSEAIAAEERNLKINRRLIELCEEQLKDFKKE
Ga0315278_105473884	3300031997	Sediment	MIEDKDLGIKVAENSDEAFWTEQKEKCLEAIKAEERNLKINKRMIALCEEQLK
Ga0315274_113548792	3300031999	Sediment	MIENEELGLKIAETTDEAFWTELKEKCLRAIDAENRNLKINERMIELCDKELEKK
Ga0315274_120443422	3300031999	Sediment	MIENEELGLKIAETSEEKFFTELKEKCEEALEAENRNIKINKMMLELCKEELKDYAH
Ga0315284_103708092	3300032053	Sediment	MIEDKELGIKIAENPDEAFWTETKEKCKDALAAEERNMKINKKMLELCEEELKCT
Ga0315284_105320974	3300032053	Sediment	MIEDVGLGLKIAENLDEVFWTETKEKCSEAIAAEERNLKINRRLIELCEEQLKDFKKE
Ga0315287_129097422	3300032397	Sediment	MIEDKSLGLKIAESSDEHFWIETKEKCLEAVDAEKRNIKINKAILKVCKRELKCI
Ga0315273_100361309	3300032516	Sediment	MIENEELGLKIAETTDEAFWTELKEKCLRAIDAENRNLKINKRMIELCDKELEKK
Ga0315273_114734033	3300032516	Sediment	MIENKELGVKIAENADEVFWRETKQKCQEAIKAEERNIKINGRLIALCEEEL
Ga0316626_100073631	3300033485	Soil	MIENKELGLKIAENSDEVFWTELKEKCLDATKAEERNLKINSHMLKL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters