Metagenome Family F085061

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085061
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	76 residues
Representative Sequence	MNELDNIHFEFTQFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYDSL
Number of Associated Samples	75
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	8.11 %
% of genes near scaffold ends (potentially truncated)	16.22 %
% of genes from short scaffolds (< 2000 bps)	68.47 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.450 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (26.126 % of family members)
Environment Ontology (ENVO)	Unclassified (56.757 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (54.054 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.28% β-sheet: 0.00% Coil/Unstructured: 54.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13392	HNH_3	27.93
PF04851	ResIII	4.50
PF00512	HisKA	4.50
PF00959	Phage_lysozyme	2.70
PF01555	N6_N4_Mtase	1.80
PF08800	VirE_N	0.90
PF03237	Terminase_6N	0.90
PF01596	Methyltransf_3	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.80
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.80
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.80
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.90
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
All Organisms	root	All Organisms	49.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
cellular organisms	root	All Organisms → cellular organisms	27.93 %
Viruses	superkingdom	All Organisms → Viruses	21.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.01 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	8.11 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	8.11 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.41 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8.11 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.70 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.80 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.70 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	2.70 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	1.80 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	1.80 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.90 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
unclassified Oxalobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae	2.70 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2.70 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	1.80 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	1.80 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.90 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	2.70 %
unclassified Nitrosospira	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira	1.80 %
Roseivirgaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae	1.80 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1.80 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.90 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	2.70 %
Nitrosospira sp. Nsp2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp. Nsp2	1.80 %
Roseivirga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae → Roseivirga	1.80 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	1.80 %
Winogradskyella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella	0.90 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	2.70 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1.80 %
Roseivirga pacifica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae → Roseivirga → Roseivirga pacifica	1.80 %
Nitrosospira sp. Nsp2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp. Nsp2	1.80 %
unclassified Winogradskyella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella	0.90 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.72 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	2.70 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1.80 %
Roseivirga pacifica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae → Roseivirga → Roseivirga pacifica	1.80 %
Nitrosospira sp. Nsp2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp. Nsp2	1.80 %
Winogradskyella sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	0.90 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352003\|2199773408	All Organisms → cellular organisms → Bacteria → Proteobacteria	1950	Open in IMG/M
3300002835\|B570J40625_100002299	All Organisms → cellular organisms → Bacteria	35590	Open in IMG/M
3300002835\|B570J40625_100770250	Not Available	850	Open in IMG/M
3300003394\|JGI25907J50239_1028095	All Organisms → Viruses → Predicted Viral	1215	Open in IMG/M
3300003860\|Ga0031658_1000904	Not Available	5300	Open in IMG/M
3300003860\|Ga0031658_1001238	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	4605	Open in IMG/M
3300003860\|Ga0031658_1018540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	1171	Open in IMG/M
3300003860\|Ga0031658_1041422	Not Available	788	Open in IMG/M
3300003860\|Ga0031658_1069057	Not Available	621	Open in IMG/M
3300003860\|Ga0031658_1075298	Not Available	597	Open in IMG/M
3300003910\|JGI26437J51864_10007500	Not Available	2422	Open in IMG/M
3300006040\|Ga0073914_10007194	All Organisms → Viruses → Predicted Viral	1843	Open in IMG/M
3300009068\|Ga0114973_10013858	All Organisms → cellular organisms → Bacteria	5124	Open in IMG/M
3300009152\|Ga0114980_10104648	All Organisms → Viruses → Predicted Viral	1692	Open in IMG/M
3300009158\|Ga0114977_10283134	Not Available	949	Open in IMG/M
3300009159\|Ga0114978_10042588	Not Available	3176	Open in IMG/M
3300009159\|Ga0114978_10096156	All Organisms → Viruses → Predicted Viral	1961	Open in IMG/M
3300009159\|Ga0114978_10120558	Not Available	1713	Open in IMG/M
3300009163\|Ga0114970_10000307	All Organisms → cellular organisms → Bacteria	35732	Open in IMG/M
3300009164\|Ga0114975_10041674	Not Available	2726	Open in IMG/M
3300009169\|Ga0105097_10037645	Not Available	2595	Open in IMG/M
3300009181\|Ga0114969_10572571	Not Available	622	Open in IMG/M
3300009183\|Ga0114974_10014750	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	5605	Open in IMG/M
3300009183\|Ga0114974_10015655	Not Available	5420	Open in IMG/M
3300009183\|Ga0114974_10651968	Not Available	576	Open in IMG/M
3300009184\|Ga0114976_10322923	Not Available	821	Open in IMG/M
3300009185\|Ga0114971_10751632	Not Available	530	Open in IMG/M
3300010885\|Ga0133913_11808455	Not Available	1529	Open in IMG/M
3300011010\|Ga0139557_1092358	Not Available	501	Open in IMG/M
3300011183\|Ga0136713_1035358	Not Available	650	Open in IMG/M
3300012017\|Ga0153801_1018091	All Organisms → Viruses → Predicted Viral	1256	Open in IMG/M
3300012266\|Ga0136712_1015963	Not Available	827	Open in IMG/M
3300012665\|Ga0157210_1001884	Not Available	5910	Open in IMG/M
3300012665\|Ga0157210_1007086	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae → Roseivirga → Roseivirga pacifica	2140	Open in IMG/M
3300017716\|Ga0181350_1057337	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300017754\|Ga0181344_1115960	Not Available	773	Open in IMG/M
3300019783\|Ga0181361_104715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp. Nsp2	1036	Open in IMG/M
3300020141\|Ga0211732_1010356	Not Available	1184	Open in IMG/M
3300020205\|Ga0211731_10410552	All Organisms → Viruses → Predicted Viral	1177	Open in IMG/M
3300020229\|Ga0194042_1009218	All Organisms → cellular organisms → Bacteria → Proteobacteria	2734	Open in IMG/M
3300020495\|Ga0208720_1022552	Not Available	704	Open in IMG/M
3300020525\|Ga0207938_1021720	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300020572\|Ga0207909_1004475	All Organisms → cellular organisms → Bacteria	3174	Open in IMG/M
3300021075\|Ga0194063_10349254	Not Available	563	Open in IMG/M
3300021079\|Ga0194055_10156556	Not Available	952	Open in IMG/M
3300021140\|Ga0214168_1038148	All Organisms → Viruses → Predicted Viral	1196	Open in IMG/M
3300021340\|Ga0194041_10039077	Not Available	1546	Open in IMG/M
3300021516\|Ga0194045_1000037	All Organisms → cellular organisms → Bacteria	35144	Open in IMG/M
3300022543\|Ga0212119_1053600	Not Available	634	Open in IMG/M
3300023184\|Ga0214919_10652931	Not Available	608	Open in IMG/M
3300027721\|Ga0209492_1048898	All Organisms → Viruses → Predicted Viral	1490	Open in IMG/M
3300027733\|Ga0209297_1041140	All Organisms → Viruses → Predicted Viral	2118	Open in IMG/M
3300027736\|Ga0209190_1000314	All Organisms → cellular organisms → Bacteria	35736	Open in IMG/M
3300027746\|Ga0209597_1004357	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8698	Open in IMG/M
3300027746\|Ga0209597_1010576	All Organisms → cellular organisms → Bacteria	5367	Open in IMG/M
3300027759\|Ga0209296_1032813	Not Available	2846	Open in IMG/M
3300027759\|Ga0209296_1160248	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	1001	Open in IMG/M
3300027770\|Ga0209086_10303916	Not Available	679	Open in IMG/M
3300027777\|Ga0209829_10175765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	955	Open in IMG/M
3300027782\|Ga0209500_10004468	All Organisms → cellular organisms → Bacteria	9250	Open in IMG/M
3300027782\|Ga0209500_10056120	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300027782\|Ga0209500_10256557	Not Available	760	Open in IMG/M
3300027785\|Ga0209246_10042223	All Organisms → Viruses → Predicted Viral	1750	Open in IMG/M
3300027785\|Ga0209246_10224466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp. Nsp2	731	Open in IMG/M
3300027797\|Ga0209107_10454193	Not Available	576	Open in IMG/M
3300027798\|Ga0209353_10116429	All Organisms → Viruses → Predicted Viral	1203	Open in IMG/M
3300027808\|Ga0209354_10052613	All Organisms → Viruses → Predicted Viral	1642	Open in IMG/M
3300027885\|Ga0209450_10000493	Not Available	20275	Open in IMG/M
3300027885\|Ga0209450_10632553	Not Available	780	Open in IMG/M
3300027899\|Ga0209668_10000769	All Organisms → cellular organisms → Bacteria	13319	Open in IMG/M
3300027899\|Ga0209668_10002384	Not Available	8265	Open in IMG/M
3300027899\|Ga0209668_10003063	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7445	Open in IMG/M
3300027899\|Ga0209668_10008791	All Organisms → Viruses → Predicted Viral	4675	Open in IMG/M
3300027899\|Ga0209668_10059487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	2092	Open in IMG/M
3300027899\|Ga0209668_10134362	All Organisms → Viruses → Predicted Viral	1483	Open in IMG/M
3300027899\|Ga0209668_10168346	All Organisms → Viruses → Predicted Viral	1342	Open in IMG/M
3300027899\|Ga0209668_10276712	Not Available	1071	Open in IMG/M
3300027899\|Ga0209668_10328001	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300027942\|Ga0209841_1029217	Not Available	652	Open in IMG/M
3300027969\|Ga0209191_1014985	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	3986	Open in IMG/M
3300027969\|Ga0209191_1015040	All Organisms → cellular organisms → Bacteria	3976	Open in IMG/M
3300027969\|Ga0209191_1270129	Not Available	641	Open in IMG/M
3300031834\|Ga0315290_10465384	Not Available	1105	Open in IMG/M
3300031873\|Ga0315297_10865920	Not Available	751	Open in IMG/M
3300031873\|Ga0315297_11683121	Not Available	508	Open in IMG/M
3300031952\|Ga0315294_11229670	Not Available	605	Open in IMG/M
3300031999\|Ga0315274_11580666	Not Available	617	Open in IMG/M
3300032053\|Ga0315284_10434002	All Organisms → Viruses → Predicted Viral	1611	Open in IMG/M
3300032053\|Ga0315284_10491794	All Organisms → Viruses → Predicted Viral	1490	Open in IMG/M
3300032256\|Ga0315271_11896558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	510	Open in IMG/M
3300032275\|Ga0315270_10298365	Not Available	1010	Open in IMG/M
3300032397\|Ga0315287_12378466	Not Available	572	Open in IMG/M
3300032401\|Ga0315275_11319408	Not Available	781	Open in IMG/M
3300033984\|Ga0334989_0262179	Not Available	932	Open in IMG/M
3300033984\|Ga0334989_0448890	Not Available	652	Open in IMG/M
3300033984\|Ga0334989_0645174	Not Available	501	Open in IMG/M
3300033995\|Ga0335003_0223100	Not Available	888	Open in IMG/M
3300034021\|Ga0335004_0036153	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3533	Open in IMG/M
3300034021\|Ga0335004_0107144	All Organisms → Viruses → Predicted Viral	1861	Open in IMG/M
3300034021\|Ga0335004_0226887	All Organisms → Viruses → Predicted Viral	1147	Open in IMG/M
3300034082\|Ga0335020_0124559	All Organisms → Viruses → Predicted Viral	1306	Open in IMG/M
3300034093\|Ga0335012_0008991	All Organisms → cellular organisms → Bacteria	5995	Open in IMG/M
3300034096\|Ga0335025_0005411	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9573	Open in IMG/M
3300034116\|Ga0335068_0071089	Not Available	1995	Open in IMG/M
3300034116\|Ga0335068_0512564	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300034121\|Ga0335058_0226233	Not Available	1092	Open in IMG/M
3300034121\|Ga0335058_0641036	Not Available	591	Open in IMG/M
3300034122\|Ga0335060_0306760	Not Available	866	Open in IMG/M
3300034167\|Ga0335017_0219976	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae → Roseivirga → Roseivirga pacifica	1084	Open in IMG/M
3300034167\|Ga0335017_0379007	Not Available	771	Open in IMG/M
3300034357\|Ga0335064_0037674	All Organisms → Viruses → Predicted Viral	2662	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.20%
Terrestrial	Environmental → Terrestrial	1.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	98.20%
Soil	Environmental → Terrestrial → Soil	1.80%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	60.36%
Lentic	Environmental → Aquatic → Freshwater → Lentic	30.63%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.80%
Sand	Environmental → Terrestrial → Soil → Sand	1.80%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	50.45%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	16.22%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	9.91%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	7.21%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.31%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.80%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	26.13%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	17.12%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	16.22%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.91%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.21%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.31%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	4.50%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.80%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.80%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352003	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300006040	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_30-Apr-14	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011183	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - JTO22cm metaG	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012266	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA to study Microbial Dark Matter (Phase II) - JTO19cm metaG	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300019783	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.N	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020229	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-12m	Environmental	Open in IMG/M
3300020495	Freshwater microbial communities from Lake Mendota, WI - 20APR2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020525	Freshwater microbial communities from Lake Mendota, WI - 05MAR2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020572	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021075	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L373-20m	Environmental	Open in IMG/M
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental	Open in IMG/M
3300021140	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300021340	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-9m	Environmental	Open in IMG/M
3300021516	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L626-11m	Environmental	Open in IMG/M
3300022543	Indian_combined assembly	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027942	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_30-Apr-14 (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034357	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2199926243	2199352003	Freshwater	MSPFDNIHFEFTQFNRYLDTIIDPREADNDTMEAKVKEAIIQAYSNGFQDGQKAIIDKFPRPSSQGGDEGGREYYDSL
B570J40625_10000229914	3300002835	Freshwater	MSPFDNIHFEFTQFNRYLDTIIDPREADNDTMEAKVKEAIIQAYSNGFQDGQKAIIDKFPRPSSQGGDEGGREYYDSL*
B570J40625_1007702503	3300002835	Freshwater	MNELNNIGAEFASFNRYLDQIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQKSMYKRLPKPHDIGGDEGGREYYDSL*
JGI25907J50239_10280952	3300003394	Freshwater Lake	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSNTGGDEGGREYYDAL*
Ga0031658_10009049	3300003860	Freshwater Lake Sediment	MNPLDNIGAEFANFNRYLDAIIDPRECDDHSLTGKVKEAIVQAYSNGYHDGQQDMFKRLPKPSSQGGEEGGREYYDSL*
Ga0031658_10012384	3300003860	Freshwater Lake Sediment	MNELNNIGAEFANFNRYLDAIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQQSMYKRLPKPHDIGGDEGGREYYDSL*
Ga0031658_10185402	3300003860	Freshwater Lake Sediment	MNTLDNIGAEFAQFTKYLDTIIDPREADNDSLEAKVKEAIVQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGRAYYDSL*
Ga0031658_10414222	3300003860	Freshwater Lake Sediment	MFDNIDRDFNGFSKYLDSVIDPREADNDSLEAKVKEAIIQAYSNGFHDGQQAMADRLPKPTPMGGDEGGREYYESL*
Ga0031658_10690572	3300003860	Freshwater Lake Sediment	MNEIEQLHRYMDTIIDPREADNDTLQAKVKEAIIQAYSNGYHDGQQAMADRLPKPSPNGGEEGGLNYYEAL*
Ga0031658_10752981	3300003860	Freshwater Lake Sediment	MNELNNMGAEFANFNRYLDAIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGESGGREYYDSL*
JGI26437J51864_100075002	3300003910	Freshwater Lake Sediment	MNELDNIHYEFKQFNRYLDAIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGRDYYESL*
Ga0073914_100071942	3300006040	Sand	MNPLDNIGAEFAQFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMYKRLPKPKDLGGDEGGREYYEAL*
Ga0114973_100138585	3300009068	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGRDYYDSL*
Ga0114980_101046482	3300009152	Freshwater Lake	MNELNNIGAEFANFNRYLDAIIDPREAENDTMEAKVKEAIIQAYSNGYHDGQQAMADRLPKPTYNGGDEGGREYYDAL*
Ga0114977_102831342	3300009158	Freshwater Lake	MSTLDNIGDEFAQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL*
Ga0114978_100425883	3300009159	Freshwater Lake	MSTFDNIHYEFTQFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL*
Ga0114978_100961562	3300009159	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL*
Ga0114978_101205584	3300009159	Freshwater Lake	NFNRYLDAIIDPREAENDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEQGGREYYDAL*
Ga0114970_1000030736	3300009163	Freshwater Lake	MSPFDNIHYEFTQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGREYYDAL*
Ga0114975_100416744	3300009164	Freshwater Lake	MSTLDNIGDEFAQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEQGGREYYDAL*
Ga0105097_100376454	3300009169	Freshwater Sediment	MNPLDNIHHEFTQFNRYLDTIIDPREADNDTPQAKVKEAIIQAYSNGYHDGQEAMYKRLPKPSNNGGYEGGREYYDSL*
Ga0114969_105725712	3300009181	Freshwater Lake	MSTLDKIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGDEGGREYYDAL*
Ga0114974_100147501	3300009183	Freshwater Lake	MSPFDNIQYEFTQFNRYLDTIIDPRECENDTMEAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGRDYYESL*
Ga0114974_100156558	3300009183	Freshwater Lake	MNEIDNIGAEFANFNRFLAQIIDPRECENDTMQGMVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGDEGGREYYDAL*
Ga0114974_106519683	3300009183	Freshwater Lake	MNPLDNIYFEFTQFNRYLDAIIDPRECDDDTPQAKVKEAIIQAYSNGYHDGQQAMADRLPKPTYNGGDEG
Ga0114976_103229232	3300009184	Freshwater Lake	MSPFDNIHYEFTQFNRYLDTIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL*
Ga0114971_107516321	3300009185	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGRDYYDSL*
Ga0133913_118084553	3300010885	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGRDYYESL*
Ga0139557_10923582	3300011010	Freshwater	MNPLDNIGAEFANFNRYMDANIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMFKRLPKPSNTGGDE
Ga0136713_10353581	3300011183	Freshwater	IHHEFKQFNRYLDTIIDPREADNDTMEAKVKESIIQAYSNGYHDGQQAMADRLPKPTPMGGDEGGREYYESL*
Ga0153801_10180912	3300012017	Freshwater	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMFKRLPKPSYTGGDEGGREYYDSL*
Ga0136712_10159631	3300012266	Freshwater	MNELNNIGAEFASFNRYLDAIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYDSL*
Ga0157210_100188411	3300012665	Freshwater	MSTLDNIGAEFANFNRFLDTIIDPREADNDSLEAKVKQAIIDAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL*
Ga0157210_10070866	3300012665	Freshwater	MSPFDNIHYEFTQFNRYLDTIIDPRECENDTMEAKVKEAIIQAYSNGYHDGQQDMFKRLPKPTSQGGDEGGREYYDSL*
Ga0181350_10573372	3300017716	Freshwater Lake	MSPFDNIHHEFTQFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPLSQGGEEGGREYYDSL
Ga0181344_11159602	3300017754	Freshwater Lake	MNTLEQLHRYMDTIIDPREADNDTLQAKIKEAIIQAYSNGYHDGQQAMADRLPKPSPNGGEAGGLKYYEAL
Ga0181361_1047152	3300019783	Freshwater Lake	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMFKRLPKPSNLGGDEGGREYYDAL
Ga0211732_10103563	3300020141	Freshwater	MNPLDNIGAEFANFNRYLDAIIDPRECDDQSLTGKVKEAIVQAYSNGYHDGQQDMFKRLPKPSSQGGEEGGDQADRRL
Ga0211731_104105522	3300020205	Freshwater	MNPLDNIHYEFSQFTKYLDTIIDPRECDDDRLQSKVKEAIVQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYDSL
Ga0194042_10092185	3300020229	Anoxic Zone Freshwater	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSNLGGDEGGREYYDAL
Ga0208720_10225523	3300020495	Freshwater	MNELNNIGAEFASFNRYLDQIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQKSMYKRLPKPHDIGGDEGGREYYDSL
Ga0207938_10217203	3300020525	Freshwater	MNELDNIHFEFTQFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYDSL
Ga0207909_10044755	3300020572	Freshwater	MSPFDNIHFEFTQFNRYLDAIIDPREADDDSMHAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGDEGGREYYDSL
Ga0194063_103492541	3300021075	Anoxic Zone Freshwater	MNPLDNIGAEFANFNRYLDAIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGDEGGREYYE
Ga0194055_101565561	3300021079	Anoxic Zone Freshwater	MNPLDNIGAEFANFNRYMDAIIDPRECDDDTPYAKVKEAIIQAYSNGYHDGQQSMFKRLPKPSDNGGDEGGREYYDAL
Ga0214168_10381482	3300021140	Freshwater	MNELDNIHFEFTQFNRYLDAIIDPREADDDSMHAKVKEAIIQAYSNGFQDGQKAIIDKFPRPSSQGGDEGGREYYDSL
Ga0194041_100390773	3300021340	Anoxic Zone Freshwater	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGYHDGQQSMFKRLPKPSDNGGDEGGREYY
Ga0194045_100003745	3300021516	Anoxic Zone Freshwater	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMFKRLPKPSNTGGDEGGREYYDAL
Ga0212119_10536002	3300022543	Freshwater	MNELNNIGAEFASFNRYLDAIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYDSL
Ga0214919_106529311	3300023184	Freshwater	MNEIYNIGAEFANFNRFLDTIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYDSL
Ga0209492_10488981	3300027721	Freshwater Sediment	MNPLDNIHHEFTQFNRYLDTIIDPREADNDTPQAKVKEAIIQAYSNGYHDGQEAMYKRLPKPSNNGGDEGGREY
Ga0209297_10411406	3300027733	Freshwater Lake	MNELNNIGAEFANFNRYLDAIIDPREAENDTMEAKVKEAIIQAYSNGYHDGQQAMADRLPKPTYNGGDEGGREYYDAL
Ga0209190_100031434	3300027736	Freshwater Lake	MSPFDNIHYEFTQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGREYYDAL
Ga0209597_100435710	3300027746	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGREYYDSL
Ga0209597_10105768	3300027746	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGRDYYDSL
Ga0209296_10328131	3300027759	Freshwater Lake	MNEIDNIGAEFANFNRFLAQIIDPRECENDTMQGMVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGDEGGREYYDAL
Ga0209296_11602482	3300027759	Freshwater Lake	MSPFDNIQYEFTQFNRYLDTIIDPRECENDTMEAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGRDYYESL
Ga0209086_103039162	3300027770	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGRDYYDSL
Ga0209829_101757652	3300027777	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPRECDNDSLEAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGRDYYDSL
Ga0209500_100044684	3300027782	Freshwater Lake	MSTFDNIHYEFTQFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL
Ga0209500_100561201	3300027782	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEQGGREYYDAL
Ga0209500_102565572	3300027782	Freshwater Lake	MSTLDNIGDEFAQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQGGRDY
Ga0209246_100422234	3300027785	Freshwater Lake	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSNTGGDEGGREYYDAL
Ga0209246_102244661	3300027785	Freshwater Lake	RYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMFKRLPKPSNLGGDEGGREYYDAL
Ga0209107_104541932	3300027797	Freshwater And Sediment	MNPLDNIGAEFANFNRYLDAIIDPRECDNDTPYAKVKEAIIQAYSNGFHDGQQSMFKRLPKPSYTGGDEGGREYYDAL
Ga0209353_101164292	3300027798	Freshwater Lake	MNELDNIHYEFKQFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSNTGGDEGGREYYDAL
Ga0209354_100526132	3300027808	Freshwater Lake	MSPFDNIHHEFTQFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYDSL
Ga0209450_1000049316	3300027885	Freshwater Lake Sediment	MNELDNIHYEFKQFNRYLDAIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGRDYYESL
Ga0209450_106325533	3300027885	Freshwater Lake Sediment	MNELDNIGAEFASFNRYLDQIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQQSMYKRLPKPHDIGGDEGGREYYDSL
Ga0209668_1000076913	3300027899	Freshwater Lake Sediment	MNPLDNIGAEFANFNRYLDAIIDPRECDDHSLTGKVKEAIVQAYSNGYHDGQQDMFKRLPKPSSQGGEEGGREYYDSL
Ga0209668_100023845	3300027899	Freshwater Lake Sediment	MSTFDNIHYEFTQFNRYLDAIIDSREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL
Ga0209668_1000306312	3300027899	Freshwater Lake Sediment	MNELNNIGAEFANFNRYLDAIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQQSMYKRLPKPHDIGGDEGGREYYDSL
Ga0209668_100087912	3300027899	Freshwater Lake Sediment	MNELNNMGAEFANFNRYLDAIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGESGGREYYDSL
Ga0209668_100594873	3300027899	Freshwater Lake Sediment	MNTLDNIGAEFAQFTKYLDTIIDPREADNDSLEAKVKEAIVQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGRAYYDSL
Ga0209668_101343622	3300027899	Freshwater Lake Sediment	MFDNIDRDFNGFSKYLDSVIDPREADNDSLEAKVKEAIIQAYSNGFHDGQQAMADRLPKPTPMGGDEGGREYYESL
Ga0209668_101683463	3300027899	Freshwater Lake Sediment	MSPLDNIGAEFANFNRFLDTIIDPREADNDSLEAKVKEAIVQAYSNGYHDGQQAMADRLPKPSPTGGEQGGLDYYDSL
Ga0209668_102767122	3300027899	Freshwater Lake Sediment	MNEIEQLHRYMDTIIDPREADNDTLQAKVKEAIIQAYSNGYHDGQQAMADRLPKPSPNGGEEGGLNYYEAL
Ga0209668_103280011	3300027899	Freshwater Lake Sediment	MNPLDNIHYEFSQFTKYLDTIIDPRECDDDRLQSKVKEAIVQAYSNGYHDGQEAMYKRLPKPSPNGGEQGGLEYYESL
Ga0209841_10292172	3300027942	Sand	MNPLDNIGAEFAQFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMYKRLPKPKDLGGDEGGREYYEAL
Ga0209191_10149858	3300027969	Freshwater Lake	MSPFDNIHHEFTQFNRYLDTIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL
Ga0209191_10150406	3300027969	Freshwater Lake	MSTLDNIGDEFAQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEQGGREYYDAL
Ga0209191_12701291	3300027969	Freshwater Lake	MSPFDNIHYEFTQFNRYLDTIIDPREADDDSMQAKVKEAIIQAYSNGYHDGQKAIFDRLPKPMASGGDQG
Ga0315290_104653842	3300031834	Sediment	MNELDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSYTGGDEGGREYYDAL
Ga0315297_108659202	3300031873	Sediment	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMYKRLPKPSYTGGDEGGREYYDAL
Ga0315297_116831211	3300031873	Sediment	MNELDNIHFEFTQFNRYLDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMYKRLPKPSYTGG
Ga0315294_112296702	3300031952	Sediment	MNELDNMGAEFANFNRYLDAIIDPRECDNDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSYTGGDEGGREYYDAL
Ga0315274_115806662	3300031999	Sediment	DNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMYKRLPKPSYTGGDEGGREYYDAL
Ga0315284_104340022	3300032053	Sediment	MNPLDNIGAEFANFNRYMDEIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSYTGGDEGGREYYDAL
Ga0315284_104917942	3300032053	Sediment	MNPLDNIHFEFTQFNRYLDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSYTGGDEGGREYYDAL
Ga0315271_118965582	3300032256	Sediment	NFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSYTGGDEGGREYYDAL
Ga0315270_102983652	3300032275	Sediment	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSYTGGDEGGREYYDAL
Ga0315287_123784661	3300032397	Sediment	MNPLDNIGAEFANFNRYMDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQAMFKRLPKPSYTGGD
Ga0315275_113194081	3300032401	Sediment	MNPLDNIHFEFTQFNRYLDAIIDPREADDDTPQAKVKEAIIQAYSNGFHDGQQSMYKRLPKPSYTGGDEGGREYYDAL
Ga0334989_0262179_707_931	3300033984	Freshwater	MSPFDNIHYEFTQFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGDEGGREYY
Ga0334989_0448890_2_226	3300033984	Freshwater	MNELDNIHFEFTQFNRYLDAIIDPREADDDSMHAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGDEGGREYY
Ga0334989_0645174_148_384	3300033984	Freshwater	MNELNNMGAEFANFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGRDYYDAL
Ga0335003_0223100_153_389	3300033995	Freshwater	MNTIDNIGAEFANFNRFLAQIIDPRECENDTMQGMVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL
Ga0335004_0036153_1135_1350	3300034021	Freshwater	MSTLEQLHRYLDTIIDPREADNDTLQAKVKEAIIQAYSNGFHDGQQAMADRLPKPSPNGGEEGGLKYYEAL
Ga0335004_0107144_222_458	3300034021	Freshwater	MSPFDNIHYEFTQFNRYLDTIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQQDMFKRLPKPTSQGGDEGGREYYDSL
Ga0335004_0226887_690_926	3300034021	Freshwater	MSPFDNIHYEFTQFNRYLDTIIDPRECENDTMEAKVKEAIIQAYSNGYHDGQQDMFKRLPKPTSQGGEEGGREYYDSL
Ga0335020_0124559_368_604	3300034082	Freshwater	MNELDNMGAEFANFNRYLDAIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGDEGGREYYDSL
Ga0335012_0008991_1245_1481	3300034093	Freshwater	MSTFDNIHYEFTQFNRYLDAIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYFESL
Ga0335025_0005411_9304_9540	3300034096	Freshwater	MSPFDNIHYEFTQFNRYLDTIIDPRECDNDTMEAKVKEAIIQAYSNGYHDGQQDMFKRLPKPTSQGGEEGGREYYDSL
Ga0335068_0071089_1284_1499	3300034116	Freshwater	MSTLEQLHRYMDTIIDPREADNDTLQAKVKEAIIQAYSNGYHDGQQAMADRLPKPSPNGGEEGGLKYYEAL
Ga0335068_0512564_72_287	3300034116	Freshwater	MNEIEQLHRYMDTIIDPREADNDTLQAKIKEAIIQAYSNGFHDGQQAMADRLPKPSPNGGEAGGLKYYEAL
Ga0335058_0226233_371_607	3300034121	Freshwater	MNPLDSMGAEFANFNRYLDTIIDPREADNDSLEAKVKEAIIQAYSNGYHDGQEALYKRLPKPSTNGGEQGGLDYYEAL
Ga0335058_0641036_217_453	3300034121	Freshwater	MNTIDNIGAEFANFNRFLAQIIDPRECENDTMQGMVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYDSL
Ga0335060_0306760_455_691	3300034122	Freshwater	MNELDNIHYEFKQFNRYLDAIIDPREADNDTMQAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL
Ga0335017_0219976_117_353	3300034167	Freshwater	MNPLDHIHQEFKQFNRYLDTIIDPREADNDTMEAKVKEAIIQAYSNGYHDGQQAMADRLPKPTPMGGDEGGREYYESL
Ga0335017_0379007_91_327	3300034167	Freshwater	MNELDNIGAEFANFNRYLDAIIDPRECDNDTPYAKVKEAIIQAYSNGYHDGQKAIIDRFPRPSSQGGEEGGREYYESL
Ga0335064_0037674_1864_2100	3300034357	Freshwater	MNELDNIHFEFTQFNRYLDTIIDPREADNDSLTAKVKEAIIQAYSNGYHDGQEAMYKRLPKPTYNGGDEGGREYYDSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085061

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences