Metagenome Family F085050

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085050
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	121 residues
Representative Sequence	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Number of Associated Samples	98
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.59 %
% of genes near scaffold ends (potentially truncated)	32.43 %
% of genes from short scaffolds (< 2000 bps)	71.17 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.288 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.514 % of family members)
Environment Ontology (ENVO)	Unclassified (54.054 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.270 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.16% β-sheet: 0.00% Coil/Unstructured: 19.84%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF10518	TAT_signal	24.32
PF01914	MarC	22.52
PF01112	Asparaginase_2	8.11
PF03401	TctC	5.41
PF01425	Amidase	4.50
PF03807	F420_oxidored	4.50
PF10417	1-cysPrx_C	4.50
PF07690	MFS_1	3.60
PF00496	SBP_bac_5	1.80
PF12911	OppC_N	0.90
PF07638	Sigma70_ECF	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	22.52
COG1446	Isoaspartyl peptidase or L-asparaginase, Ntn-hydrolase superfamily	Amino acid transport and metabolism [E]	8.11
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.41
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	4.50
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.29 %
Unclassified	root	N/A	11.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.29 %
Unclassified	root	N/A	11.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.29 %
Unclassified	root	N/A	11.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.76 %
Unclassified	root	N/A	11.71 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.80 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	35.14 %
Unclassified	root	N/A	11.71 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	26.13 %
Unclassified	root	N/A	11.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7.21 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.80 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.13 %
Unclassified	root	N/A	11.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7.21 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.13 %
Unclassified	root	N/A	11.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7.21 %
Leptospirillum	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.13 %
Unclassified	root	N/A	11.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7.21 %
Leptospirillum sp. Group III	species group	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum → Leptospirillum sp. Group III	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	26.13 %
Unclassified	root	N/A	11.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7.21 %
Leptospirillum ferriphilum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum → Leptospirillum sp. Group III → Leptospirillum ferriphilum	1.80 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_106364373	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum → Leptospirillum sp. Group III → Leptospirillum ferriphilum	506	Open in IMG/M
3300004643\|Ga0062591_102327671	Not Available	560	Open in IMG/M
3300005290\|Ga0065712_10168051	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300005293\|Ga0065715_10631547	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum → Leptospirillum sp. Group III → Leptospirillum ferriphilum	689	Open in IMG/M
3300005328\|Ga0070676_10295943	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300005330\|Ga0070690_100320599	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300005331\|Ga0070670_100003834	All Organisms → cellular organisms → Bacteria → Proteobacteria	12531	Open in IMG/M
3300005331\|Ga0070670_100350224	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300005331\|Ga0070670_100592542	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005333\|Ga0070677_10031049	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300005334\|Ga0068869_100118071	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300005334\|Ga0068869_100375164	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300005335\|Ga0070666_10045146	All Organisms → cellular organisms → Bacteria → Proteobacteria	2953	Open in IMG/M
3300005338\|Ga0068868_100110572	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300005340\|Ga0070689_100220534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1555	Open in IMG/M
3300005340\|Ga0070689_100224701	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300005341\|Ga0070691_10734963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	595	Open in IMG/M
3300005344\|Ga0070661_100228078	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300005345\|Ga0070692_10245742	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300005347\|Ga0070668_100223908	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300005354\|Ga0070675_100127143	All Organisms → cellular organisms → Bacteria → Proteobacteria	2169	Open in IMG/M
3300005355\|Ga0070671_100218653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1616	Open in IMG/M
3300005355\|Ga0070671_100589290	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300005356\|Ga0070674_100027878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3704	Open in IMG/M
3300005365\|Ga0070688_100077799	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300005466\|Ga0070685_10085362	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300005544\|Ga0070686_100277919	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300005564\|Ga0070664_100192450	All Organisms → cellular organisms → Bacteria → Proteobacteria	1818	Open in IMG/M
3300005578\|Ga0068854_100636799	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300005615\|Ga0070702_100420272	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300005617\|Ga0068859_101263465	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005718\|Ga0068866_10113876	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300005840\|Ga0068870_10050742	All Organisms → cellular organisms → Bacteria	2193	Open in IMG/M
3300005843\|Ga0068860_101770824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	639	Open in IMG/M
3300009098\|Ga0105245_10207418	All Organisms → cellular organisms → Bacteria → Proteobacteria	1884	Open in IMG/M
3300009101\|Ga0105247_11509736	Not Available	548	Open in IMG/M
3300009148\|Ga0105243_10156291	All Organisms → cellular organisms → Bacteria → Proteobacteria	1961	Open in IMG/M
3300009156\|Ga0111538_10675291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1309	Open in IMG/M
3300009177\|Ga0105248_10696433	Not Available	1146	Open in IMG/M
3300010397\|Ga0134124_10239606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1664	Open in IMG/M
3300010400\|Ga0134122_10327106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1326	Open in IMG/M
3300010401\|Ga0134121_12492133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	559	Open in IMG/M
3300010403\|Ga0134123_10028360	All Organisms → cellular organisms → Bacteria → Proteobacteria	4050	Open in IMG/M
3300011119\|Ga0105246_10179624	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300012898\|Ga0157293_10018980	All Organisms → cellular organisms → Bacteria → Proteobacteria	1252	Open in IMG/M
3300012905\|Ga0157296_10194835	Not Available	642	Open in IMG/M
3300012907\|Ga0157283_10095506	Not Available	786	Open in IMG/M
3300012914\|Ga0157297_10222186	Not Available	667	Open in IMG/M
3300012989\|Ga0164305_11159609	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300013297\|Ga0157378_10285840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1591	Open in IMG/M
3300013308\|Ga0157375_12415026	Not Available	627	Open in IMG/M
3300014325\|Ga0163163_10698494	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300014325\|Ga0163163_13054775	Not Available	522	Open in IMG/M
3300014326\|Ga0157380_10353909	All Organisms → cellular organisms → Bacteria → Proteobacteria	1375	Open in IMG/M
3300014326\|Ga0157380_13287900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	517	Open in IMG/M
3300014745\|Ga0157377_10143227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1471	Open in IMG/M
3300014969\|Ga0157376_10052334	All Organisms → cellular organisms → Bacteria → Proteobacteria	3395	Open in IMG/M
3300015200\|Ga0173480_10010412	All Organisms → cellular organisms → Bacteria → Proteobacteria	3731	Open in IMG/M
3300015201\|Ga0173478_10007803	All Organisms → cellular organisms → Bacteria → Proteobacteria	2654	Open in IMG/M
3300015371\|Ga0132258_10051259	All Organisms → cellular organisms → Bacteria → Proteobacteria	9443	Open in IMG/M
3300015372\|Ga0132256_100425284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1433	Open in IMG/M
3300015374\|Ga0132255_100111240	All Organisms → cellular organisms → Bacteria → Proteobacteria	3742	Open in IMG/M
3300017792\|Ga0163161_10064028	All Organisms → cellular organisms → Bacteria → Proteobacteria	2681	Open in IMG/M
3300017792\|Ga0163161_11032632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	703	Open in IMG/M
3300017965\|Ga0190266_10002730	All Organisms → cellular organisms → Bacteria	3607	Open in IMG/M
3300017965\|Ga0190266_10042079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1549	Open in IMG/M
3300018031\|Ga0184634_10339649	Not Available	689	Open in IMG/M
3300018073\|Ga0184624_10017268	All Organisms → cellular organisms → Bacteria	2636	Open in IMG/M
3300018074\|Ga0184640_10316147	Not Available	709	Open in IMG/M
3300018081\|Ga0184625_10061020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1902	Open in IMG/M
3300018083\|Ga0184628_10008496	All Organisms → cellular organisms → Bacteria → Proteobacteria	4942	Open in IMG/M
3300019356\|Ga0173481_10409602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	666	Open in IMG/M
3300020034\|Ga0193753_10068826	All Organisms → cellular organisms → Bacteria → Proteobacteria	1838	Open in IMG/M
3300021363\|Ga0193699_10278309	Not Available	697	Open in IMG/M
3300022756\|Ga0222622_10026183	All Organisms → cellular organisms → Bacteria	3047	Open in IMG/M
3300022886\|Ga0247746_1026690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1273	Open in IMG/M
3300025271\|Ga0207666_1029497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	836	Open in IMG/M
3300025315\|Ga0207697_10027880	All Organisms → cellular organisms → Bacteria → Proteobacteria	2309	Open in IMG/M
3300025893\|Ga0207682_10020808	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300025901\|Ga0207688_10017121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3938	Open in IMG/M
3300025903\|Ga0207680_10523222	Not Available	846	Open in IMG/M
3300025903\|Ga0207680_10537214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	834	Open in IMG/M
3300025907\|Ga0207645_10012463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5766	Open in IMG/M
3300025908\|Ga0207643_10044566	All Organisms → cellular organisms → Bacteria	2504	Open in IMG/M
3300025920\|Ga0207649_10504563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	920	Open in IMG/M
3300025923\|Ga0207681_10087807	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
3300025923\|Ga0207681_10356127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1172	Open in IMG/M
3300025925\|Ga0207650_10010528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6345	Open in IMG/M
3300025927\|Ga0207687_10233437	All Organisms → cellular organisms → Bacteria → Proteobacteria	1454	Open in IMG/M
3300025930\|Ga0207701_10047800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3949	Open in IMG/M
3300025934\|Ga0207686_10492146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	950	Open in IMG/M
3300025936\|Ga0207670_10078829	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300025937\|Ga0207669_10029272	All Organisms → cellular organisms → Bacteria → Proteobacteria	3043	Open in IMG/M
3300025940\|Ga0207691_10040035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4333	Open in IMG/M
3300025940\|Ga0207691_10295231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1393	Open in IMG/M
3300025941\|Ga0207711_10396365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1282	Open in IMG/M
3300025945\|Ga0207679_11629297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	591	Open in IMG/M
3300025972\|Ga0207668_10509863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1036	Open in IMG/M
3300026023\|Ga0207677_12215888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511	Open in IMG/M
3300026116\|Ga0207674_10167628	All Organisms → cellular organisms → Bacteria → Proteobacteria	2150	Open in IMG/M
3300027911\|Ga0209698_11429317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	503	Open in IMG/M
3300028802\|Ga0307503_10353402	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300028802\|Ga0307503_10373818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	737	Open in IMG/M
3300031538\|Ga0310888_10447513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	765	Open in IMG/M
3300031716\|Ga0310813_10436273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1134	Open in IMG/M
3300032003\|Ga0310897_10301454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	733	Open in IMG/M
3300032017\|Ga0310899_10560705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	568	Open in IMG/M
3300032074\|Ga0308173_10942811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	800	Open in IMG/M
3300032075\|Ga0310890_10492089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	931	Open in IMG/M
3300032211\|Ga0310896_10142646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1126	Open in IMG/M
3300034150\|Ga0364933_072690	Not Available	859	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.66%
Environmental	Environmental	42.34%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.66%
Terrestrial	Environmental → Terrestrial	36.04%
Aquatic	Environmental → Aquatic	6.31%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.84%
Soil	Environmental → Terrestrial → Soil	35.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.02%
Sediment	Environmental → Aquatic → Sediment	6.31%
Roots	Host-Associated → Plants → Roots	1.80%
Floodplain	Environmental → Terrestrial → Floodplain	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	24.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.51%
Loam	Environmental → Terrestrial → Soil → Loam	9.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	24.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	11.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	8.11%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	6.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1063643731	3300004463	Arabidopsis Thaliana Rhizosphere	MGWMEELLGTVPAAAKYRAELETLVRENARLRSENAELKNELTQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATAQS
Ga0062591_1023276712	3300004643	Soil	RENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT*
Ga0065712_101680511	3300005290	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHDMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0065715_106315471	3300005293	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLR
Ga0070676_102959431	3300005328	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0070690_1003205992	3300005330	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT*
Ga0070670_1000038341	3300005331	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT*
Ga0070670_1003502242	3300005331	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLVRENARLRSENAELKNELTQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0070670_1005925421	3300005331	Switchgrass Rhizosphere	MEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRG
Ga0070677_100310491	3300005333	Miscanthus Rhizosphere	MGWMEELLGTVPAVAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHDMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT*
Ga0068869_1001180712	3300005334	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLVRENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT*
Ga0068869_1003751641	3300005334	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARKNARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT*
Ga0070666_100451462	3300005335	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0068868_1001105723	3300005338	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHDMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT*
Ga0070689_1002205341	3300005340	Switchgrass Rhizosphere	GTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGWRYLRDRGFLT*
Ga0070689_1002247012	3300005340	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLYGDAVRTLQYLAQGDYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSHKGRRNLHSRGLAT*
Ga0070691_107349632	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHSENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSG
Ga0070661_1002280782	3300005344	Corn Rhizosphere	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0070692_102457422	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MGWMEELPGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHDMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT*
Ga0070668_1002239081	3300005347	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSHKGRRNLHSRGLAT*
Ga0070675_1001271432	3300005354	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0070671_1002186533	3300005355	Switchgrass Rhizosphere	KYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0070671_1005892902	3300005355	Switchgrass Rhizosphere	GWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLYGDAVRTLQYLAQGDYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSNKGRRYLHSRGLAT*
Ga0070674_1000278784	3300005356	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0070688_1000777991	3300005365	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT*
Ga0070685_100853622	3300005466	Switchgrass Rhizosphere	MEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSHKGRRNLHSRGLAT*
Ga0070686_1002779191	3300005544	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLYGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0070664_1001924503	3300005564	Corn Rhizosphere	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0068854_1006367992	3300005578	Corn Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGWRYLRDRGFLTYAGCKRRTA*
Ga0070702_1004202722	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQVAEMYLHFLVKHAYVAAPGATAQ
Ga0068859_1012634651	3300005617	Switchgrass Rhizosphere	ELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSHKGRRYLHSRGLAT*
Ga0068866_101138763	3300005718	Miscanthus Rhizosphere	SVHMGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0068870_100507421	3300005840	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0068860_1017708241	3300005843	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRG
Ga0105245_102074183	3300009098	Miscanthus Rhizosphere	MEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT*
Ga0105247_115097361	3300009101	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELATLVRENARLHVENAELKNELAQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYG
Ga0105243_101562911	3300009148	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHSKNTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0111538_106752911	3300009156	Populus Rhizosphere	MEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0105248_106964332	3300009177	Switchgrass Rhizosphere	ARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT*
Ga0134124_102396062	3300010397	Terrestrial Soil	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGWRYLRDRGFLT*
Ga0134122_103271062	3300010400	Terrestrial Soil	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQFIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPAPGGSAGYRLSHKGRRYLHSRGMAT*
Ga0134121_124921331	3300010401	Terrestrial Soil	MEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQ
Ga0134123_100283603	3300010403	Terrestrial Soil	MEELLGTVPADAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIVEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0105246_101796242	3300011119	Miscanthus Rhizosphere	MEELLGTVPAAAKYRAELATLARENARLHVENAELKNELAQFIEQWETLDGDAVRTLQYLAQGAYAGADAIARTHNMNFQIVEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0157293_100189802	3300012898	Soil	MEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT*
Ga0157296_101948351	3300012905	Soil	MEELLGTVPAAAKYRAELETLARENARLRSENAELKNELAQYIEQFETLDGDAVRTPQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT*
Ga0157283_100955062	3300012907	Soil	MEELLGTVPAAAKYRAELEILARERLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT*
Ga0157297_102221862	3300012914	Soil	MEELLGTVPAAAKYRAELETLVRENARLRSENAELKNELTQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATA
Ga0164305_111596092	3300012989	Soil	RENARLRSENAELKNELTQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0157378_102858402	3300013297	Miscanthus Rhizosphere	MEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVGRPAPRPKADMT*
Ga0157375_124150261	3300013308	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0163163_106984942	3300014325	Switchgrass Rhizosphere	AAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0163163_130547751	3300014325	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLVRENARLRSENAELKNELTQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPAPDGKAGY
Ga0157380_103539093	3300014326	Switchgrass Rhizosphere	PAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGWRYLRDRGFLTYAGCKRRTA*
Ga0157380_132879001	3300014326	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHSENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHDMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT*
Ga0157377_101432272	3300014745	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARDNARLYVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0157376_100523341	3300014969	Miscanthus Rhizosphere	MEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLYGDAVRTLQYLAQGDYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSNKGRRYLHSRG
Ga0173480_100104124	3300015200	Soil	MEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0173478_100078033	3300015201	Soil	MGWMEELLGTVPAAAKYRAELETLARENARLHSENTELKNELAQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT*
Ga0132258_100512591	3300015371	Arabidopsis Rhizosphere	KYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSHKGRRYLHSRGLAT*
Ga0132256_1004252842	3300015372	Arabidopsis Rhizosphere	MEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT*
Ga0132255_1001112403	3300015374	Arabidopsis Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYFCATAAS*
Ga0163161_100640284	3300017792	Switchgrass Rhizosphere	MGWMEELLGTVPAVAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0163161_110326321	3300017792	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT
Ga0190266_100027301	3300017965	Soil	GTVPAAAKYRAELEMLARENARLDGENAELKNELAQYIEQWETLDGDAVLTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHGYVHPPVPGGKGGYGLSHKGRRYLHSRGLAT
Ga0190266_100420791	3300017965	Soil	MGWMEELLGTVPAAAKYRAELETLARENARLHGENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT
Ga0184634_103396491	3300018031	Groundwater Sediment	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELTQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT
Ga0184624_100172681	3300018073	Groundwater Sediment	MGWMEELLGTVPAAAKYRAELETLVRENARLRSENAELKNELTQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT
Ga0184640_103161471	3300018074	Groundwater Sediment	MGWMEELLDSVPAAAKYRAELETLVRENARLRSENAELKNELTQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT
Ga0184625_100610201	3300018081	Groundwater Sediment	MGWMEELLGTVPAAAKYRAELETLVRENARLRSENAELKNELTQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT
Ga0184628_100084965	3300018083	Groundwater Sediment	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNERAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT
Ga0173481_104096022	3300019356	Soil	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT
Ga0193753_100688263	3300020034	Soil	MEWMEELLGAVPTAGKHRAELENLARENARLKAENAELKTELAQYIEQWETLDGDAVRTLQYLAQDAFESAGAIARTHNMNFQIAEMYLQFLVKHAYVATPAAAAGSGYDLTSKGRRYLLQRGLLK
Ga0193699_102783092	3300021363	Soil	MEWMQELLGAVPAAAKYRAELEQMAAENAGLKAENAQLKSELAQYIEQRETLDGDAVRTLQYLAREAFESAEAIARTHNMNFQIAEMYLQFLVKHAYVAMPAAVAGSGYDLTSKGRRYLRQRGLLK
Ga0222622_100261831	3300022756	Groundwater Sediment	RAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQDVYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT
Ga0247746_10266901	3300022886	Soil	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYG
Ga0207666_10294972	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPK
Ga0207697_100278803	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0207682_100208081	3300025893	Miscanthus Rhizosphere	MGWMEELLGTVPAVAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHDMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0207688_100171213	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHSENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0207680_105232221	3300025903	Switchgrass Rhizosphere	LSKMGSAHMGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLYGDAVRTLQYLAQGDYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSHKGRRYLHSRGLAT
Ga0207680_105372142	3300025903	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0207645_100124634	3300025907	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT
Ga0207643_100445661	3300025908	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT
Ga0207649_105045631	3300025920	Corn Rhizosphere	MEELLGTVPAAAKYRAELETLVRENARLRSENAELKNELTQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0207681_100878073	3300025923	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTYNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT
Ga0207681_103561271	3300025923	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHDMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT
Ga0207650_100105287	3300025925	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0207687_102334371	3300025927	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRR
Ga0207701_100478003	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHSENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHDMNFQIAEMYLHFLVKHAYVAAPGATAQSGYGLTPKGQRYLRDRGFLT
Ga0207686_104921462	3300025934	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0207670_100788293	3300025936	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLYGDAVRTLQYLAQGDYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSHKGRRNLHSRGLAT
Ga0207669_100292721	3300025937	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT
Ga0207691_100400353	3300025940	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVGRPAPRPKADMT
Ga0207691_102952312	3300025940	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSNKGRRYLHSRGLAT
Ga0207711_103963652	3300025941	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGWRYLRDRGFLT
Ga0207679_116292971	3300025945	Corn Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHSKNTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPVPGAKAGYGLSHKGRRYLHSRGLAT
Ga0207668_105098632	3300025972	Switchgrass Rhizosphere	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHDMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGWRYLRDRGFLT
Ga0207677_122158881	3300026023	Miscanthus Rhizosphere	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGY
Ga0207674_101676282	3300026116	Corn Rhizosphere	MGWMEELLGTVPAAAKYRAELETLVRENARLRSENAELKNELTQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIVEMYLHFLVKHAYVAAPGATAQIGYDLTPKGRRYLRDRGFLT
Ga0209698_114293171	3300027911	Watersheds	MEWMEELLGAVPAAAKYRAELEKLAHENARLTSENAELKTELAQYIEQWETLDGDAVRTLQYLAQDAFESAEAIARTHNMNFQIAEMYLHFLVKHAYVAAPAAAAK
Ga0307503_103534021	3300028802	Soil	AELETLVRLRSENAELKNELTQYIEQWETLDGDAVCTLQYLAQGAYASADAIARTHNMNFQIAEMYLQFLVTHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT
Ga0307503_103738182	3300028802	Soil	MGWMEELLDSVPAPAKYRAELETLVRENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSH
Ga0310888_104475132	3300031538	Soil	MGWMEELLGTVPAAAKYRAELEILARENARLRSENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNCQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPK
Ga0310813_104362732	3300031716	Soil	MGWMEELLGTVPAAAKYRAELATLARENARLHVENAELKNELAQFIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIVEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGFLT
Ga0310897_103014541	3300032003	Soil	MGWMEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNSQIAEMYLQFLVTHAYVHPPAPDGKAGYGLSHKGRRYLHSRGLAT
Ga0310899_105607051	3300032017	Soil	MGWMDELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0308173_109428111	3300032074	Soil	MEWMQEMLRVTPQASQYRAQLENLMAENARLKDENAALKDELAQYIEQWETLDGDAVNTLRYLSAGAFDSAQAIATAHAMNIQIAELYLHFLVKHAYVAAPAAAARPVYDLTPKGRRYLQQRGL
Ga0310890_104920891	3300032075	Soil	MEELLGTVPAAAKYRAELETLARENARLHGENTELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRYLRDRGLLT
Ga0310896_101426461	3300032211	Soil	MGWMEELLGTVPAAAKYRAELETLARENARLHVENAELKNELAQYIEQWETLDGDAVRTLQYLAQGAYASADAIARTHNMNFQIAEMYLHFLVKHAYVAAPGATAQSGYDLTPKGRRY
Ga0364933_072690_173_544	3300034150	Sediment	MEALLGTVPAAGKYRAELETLARENTRLHGENAELKNELAQYIEQWETLDGDAVRTLQYLVQDDYASADAIARTHNMNFQIAEMYLQFLVTHAYVHPPAPGGKGGYGLSHKGRRYLHSRGLAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085050

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences