Metagenome / Metatranscriptome Family F085027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	74 residues
Representative Sequence	MAFLTRKIDSSKFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA
Number of Associated Samples	74
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.78 %
% of genes near scaffold ends (potentially truncated)	19.82 %
% of genes from short scaffolds (< 2000 bps)	88.29 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.658 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (30.631 % of family members)
Environment Ontology (ENVO)	Unclassified (72.072 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.856 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.71% β-sheet: 37.25% Coil/Unstructured: 48.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
d.17.2.1: Amine oxidase N-terminal region	d1w7ca3	1w7c	0.61825
f.6.1.1: Leukocidin (pore-forming toxin)	d6u2sa_	6u2s	0.61728
b.30.5.1: beta-Galactosidase, domain 5	d1yq2a4	1yq2	0.61724
f.69.1.1: Perfringolysin N-terminal-like	d3hvna3	3hvn	0.6109
d.20.1.3: RWD domain	d2daxa1	2dax	0.60669

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF07813	LTXXQ	14.41
PF06186	DUF992	6.31
PF00782	DSPc	5.41
PF01594	AI-2E_transport	3.60
PF02586	SRAP	2.70
PF13586	DDE_Tnp_1_2	0.90
PF00313	CSD	0.90
PF00441	Acyl-CoA_dh_1	0.90
PF16884	ADH_N_2	0.90
PF07238	PilZ	0.90
PF17200	sCache_2	0.90
PF13683	rve_3	0.90
PF06041	DUF924	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	57.66
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	3.60
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.70
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.90
COG3803	Uncharacterized conserved protein, DUF924 family	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.05 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.24 %
Unclassified	root	N/A	42.34 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24.32 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.80 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.80 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.80 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.70 %
Rhabdonatronobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhabdonatronobacter	1.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.80 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.90 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Rhabdonatronobacter sediminivivens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhabdonatronobacter → Rhabdonatronobacter sediminivivens	1.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.80 %
Hyphomicrobium sulfonivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans	0.90 %
Bradyrhizobium ottawaense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	0.90 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.90 %
Bradyrhizobium frederickii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium frederickii	0.90 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Rhabdonatronobacter sediminivivens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhabdonatronobacter → Rhabdonatronobacter sediminivivens	1.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.80 %
Bradyrhizobium sp. 139	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	0.90 %
Hyphomicrobium sulfonivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans	0.90 %
Bradyrhizobium ottawaense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	0.90 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.90 %
Bradyrhizobium frederickii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium frederickii	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_101430783	Not Available	576	Open in IMG/M
3300009518\|Ga0116128_1093763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	892	Open in IMG/M
3300009519\|Ga0116108_1153942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	682	Open in IMG/M
3300009519\|Ga0116108_1161520	Not Available	663	Open in IMG/M
3300009523\|Ga0116221_1038674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2295	Open in IMG/M
3300009524\|Ga0116225_1181733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	953	Open in IMG/M
3300009525\|Ga0116220_10212705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	839	Open in IMG/M
3300009547\|Ga0116136_1047556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1219	Open in IMG/M
3300009623\|Ga0116133_1037614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1197	Open in IMG/M
3300009630\|Ga0116114_1098458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhabdonatronobacter → Rhabdonatronobacter sediminivivens	779	Open in IMG/M
3300009632\|Ga0116102_1039017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1544	Open in IMG/M
3300009637\|Ga0116118_1015231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2936	Open in IMG/M
3300009640\|Ga0116126_1054367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1555	Open in IMG/M
3300009640\|Ga0116126_1060871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1441	Open in IMG/M
3300009640\|Ga0116126_1132558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300009641\|Ga0116120_1093311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	998	Open in IMG/M
3300009645\|Ga0116106_1029906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1874	Open in IMG/M
3300009645\|Ga0116106_1122254	Not Available	838	Open in IMG/M
3300009646\|Ga0116132_1027941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans	1929	Open in IMG/M
3300009672\|Ga0116215_1149520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1037	Open in IMG/M
3300009683\|Ga0116224_10169008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1051	Open in IMG/M
3300009700\|Ga0116217_10227394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1218	Open in IMG/M
3300009764\|Ga0116134_1021145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2653	Open in IMG/M
3300009764\|Ga0116134_1344373	Not Available	512	Open in IMG/M
3300009824\|Ga0116219_10188983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1182	Open in IMG/M
3300009839\|Ga0116223_10051781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2677	Open in IMG/M
3300009839\|Ga0116223_10052122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2667	Open in IMG/M
3300009839\|Ga0116223_10711126	Not Available	576	Open in IMG/M
3300010341\|Ga0074045_10997591	Not Available	527	Open in IMG/M
3300010343\|Ga0074044_10032124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3689	Open in IMG/M
3300010379\|Ga0136449_100053467	All Organisms → cellular organisms → Bacteria	9024	Open in IMG/M
3300010379\|Ga0136449_101085763	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300010379\|Ga0136449_102051811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	842	Open in IMG/M
3300010379\|Ga0136449_102861561	Not Available	679	Open in IMG/M
3300010379\|Ga0136449_103037851	Not Available	654	Open in IMG/M
3300010379\|Ga0136449_104115265	Not Available	541	Open in IMG/M
3300010379\|Ga0136449_104117761	Not Available	541	Open in IMG/M
3300014152\|Ga0181533_1134880	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300014155\|Ga0181524_10502147	Not Available	515	Open in IMG/M
3300014156\|Ga0181518_10061735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2196	Open in IMG/M
3300014162\|Ga0181538_10474142	Not Available	661	Open in IMG/M
3300014164\|Ga0181532_10424531	Not Available	736	Open in IMG/M
3300014199\|Ga0181535_10514606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium frederickii	691	Open in IMG/M
3300014200\|Ga0181526_10129624	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300014200\|Ga0181526_10758947	Not Available	611	Open in IMG/M
3300014638\|Ga0181536_10105980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1582	Open in IMG/M
3300016750\|Ga0181505_10192576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1330	Open in IMG/M
3300017822\|Ga0187802_10369713	Not Available	565	Open in IMG/M
3300017925\|Ga0187856_1128567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M
3300017928\|Ga0187806_1045863	Not Available	1322	Open in IMG/M
3300017928\|Ga0187806_1135935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	804	Open in IMG/M
3300017931\|Ga0187877_1229446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300017932\|Ga0187814_10184491	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300017935\|Ga0187848_10284879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300017938\|Ga0187854_10176973	Not Available	954	Open in IMG/M
3300017940\|Ga0187853_10530426	Not Available	512	Open in IMG/M
3300017942\|Ga0187808_10403191	Not Available	625	Open in IMG/M
3300017943\|Ga0187819_10761698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300017946\|Ga0187879_10054865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2339	Open in IMG/M
3300017946\|Ga0187879_10070162	Not Available	2036	Open in IMG/M
3300017946\|Ga0187879_10107501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1596	Open in IMG/M
3300017946\|Ga0187879_10128969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1438	Open in IMG/M
3300017946\|Ga0187879_10432633	Not Available	729	Open in IMG/M
3300017955\|Ga0187817_10338476	Not Available	959	Open in IMG/M
3300017955\|Ga0187817_10429775	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300017955\|Ga0187817_10517749	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300017955\|Ga0187817_10746483	Not Available	624	Open in IMG/M
3300017995\|Ga0187816_10306335	Not Available	698	Open in IMG/M
3300018001\|Ga0187815_10162217	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300018001\|Ga0187815_10457844	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300018006\|Ga0187804_10338647	Not Available	660	Open in IMG/M
3300018007\|Ga0187805_10310350	Not Available	726	Open in IMG/M
3300018007\|Ga0187805_10386607	Not Available	649	Open in IMG/M
3300018008\|Ga0187888_1288316	Not Available	633	Open in IMG/M
3300018008\|Ga0187888_1414978	Not Available	507	Open in IMG/M
3300018009\|Ga0187884_10412411	Not Available	543	Open in IMG/M
3300018013\|Ga0187873_1377083	Not Available	517	Open in IMG/M
3300018016\|Ga0187880_1182658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	962	Open in IMG/M
3300018016\|Ga0187880_1228138	Not Available	831	Open in IMG/M
3300018017\|Ga0187872_10021950	Not Available	3688	Open in IMG/M
3300018017\|Ga0187872_10081382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1657	Open in IMG/M
3300018019\|Ga0187874_10164368	Not Available	934	Open in IMG/M
3300018019\|Ga0187874_10406582	Not Available	549	Open in IMG/M
3300018019\|Ga0187874_10473846	Not Available	503	Open in IMG/M
3300018025\|Ga0187885_10262041	Not Available	788	Open in IMG/M
3300018026\|Ga0187857_10170790	Not Available	1024	Open in IMG/M
3300018026\|Ga0187857_10495763	Not Available	547	Open in IMG/M
3300018033\|Ga0187867_10410490	Not Available	750	Open in IMG/M
3300018035\|Ga0187875_10265407	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300018037\|Ga0187883_10079957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1712	Open in IMG/M
3300018037\|Ga0187883_10587498	Not Available	577	Open in IMG/M
3300018037\|Ga0187883_10652471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300018040\|Ga0187862_10251797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhabdonatronobacter → Rhabdonatronobacter sediminivivens	1135	Open in IMG/M
3300018042\|Ga0187871_10756526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300018046\|Ga0187851_10861499	Not Available	509	Open in IMG/M
3300018085\|Ga0187772_10366399	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300018088\|Ga0187771_11147737	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300018090\|Ga0187770_11356840	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300019082\|Ga0187852_1281399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 139	666	Open in IMG/M
3300025500\|Ga0208686_1027882	Not Available	1421	Open in IMG/M
3300025500\|Ga0208686_1028657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1396	Open in IMG/M
3300027696\|Ga0208696_1157186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300027854\|Ga0209517_10538430	Not Available	630	Open in IMG/M
3300030659\|Ga0316363_10348402	Not Available	584	Open in IMG/M
3300032160\|Ga0311301_10080799	All Organisms → cellular organisms → Bacteria	6666	Open in IMG/M
3300032160\|Ga0311301_10171181	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3835	Open in IMG/M
3300032160\|Ga0311301_11071709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1053	Open in IMG/M
3300032160\|Ga0311301_12164940	Not Available	640	Open in IMG/M
3300032160\|Ga0311301_12343520	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300033887\|Ga0334790_084002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300033888\|Ga0334792_131974	Not Available	654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	71.17%
Terrestrial	Environmental → Terrestrial	28.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	71.17%
Soil	Environmental → Terrestrial → Soil	27.03%
Peat	Environmental → Terrestrial → Peat	1.80%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	71.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	39.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	17.12%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	14.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	30.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	22.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	17.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	14.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.11%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.70%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.80%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1014307831	3300004152	Bog Forest Soil	MAFLTRKIDSSKFDDGSSIDVYEISDGDRLIGKKTVRQPATGSVVKITYHLGDQTFDNPDDFMTTYLKAQA*
Ga0116128_10937632	3300009518	Peatland	MAFLTRKIDSSKFDDCSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA*
Ga0116108_11539422	3300009519	Peatland	MVFRTRIIESSKFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAAKLLDRCGG*
Ga0116108_11615202	3300009519	Peatland	MAFLTRKIDSQTFDDGSSTNVYEISDGDRLIGKKMVRHPATGSVVTITYQLGDQTFDNPGAFMTTYLKAQAENA*
Ga0116221_10386744	3300009523	Peatlands Soil	MAFRTRKIDSSKFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQTFDNPDALMTAYLKALMVAG*
Ga0116225_11817332	3300009524	Peatlands Soil	MAFRTRIIDSQTFDDGSSTDVYAISDGDRLIGNKTVRYPATGPVVKITYQLGDQTFDNPDAFMTTYLKADMVAG*
Ga0116220_102127052	3300009525	Peatlands Soil	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDSPDAFMTAYLKALMVAA*
Ga0116136_10475562	3300009547	Peatland	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA*
Ga0116133_10376142	3300009623	Peatland	DDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDQTFDNPDAFMTTYLKALMVAG*
Ga0116114_10984581	3300009630	Peatland	MTFLTRKIDSLKFDDGSSTDVYEILDGDRLIGKKTVRHPATGPVVKITYQLGDQTFDNPDDFMTTYLKAQAENA*
Ga0116102_10390173	3300009632	Peatland	MAFRTRKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA*
Ga0116118_10152311	3300009637	Peatland	MAFLTRKIDSRAFDDGSSADVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDHTLDNPDDFMTTY
Ga0116126_10543672	3300009640	Peatland	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDNPDAFMTTYLKALMVAG*
Ga0116126_10608712	3300009640	Peatland	MAFLTRKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA*
Ga0116126_11325581	3300009640	Peatland	MAFLTRKIDSRAFDDGSSADVYEISDGDRLIGKKTVRHPATGPAIKITYQLGDQTFDNPDDFMTTYLKAQAENA*
Ga0116120_10933112	3300009641	Peatland	MAFLTRKIDSLKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDQTFDNPDAFMTTYLKALMVAG*
Ga0116106_10299062	3300009645	Peatland	MAFLTRKIDSQTFDDGSSTNVYEISDGDRLIGKKMVRHPATGSVVTISYQLGDQTFDNPDAFMTTYLKALMVAG*
Ga0116106_11222542	3300009645	Peatland	SRKSLTVSDHSGATTQWHSGHAKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA*
Ga0116132_10279414	3300009646	Peatland	MAFLTRKIDSLKFDDGSSTDVYEISDGDRLIGKKTVRHAATGSVVKITHQLGDQTFDNPDAFMTTYLKALMVAG*
Ga0116215_11495202	3300009672	Peatlands Soil	MAARFRTRIIDSQTFDDGSSADTYTISDGDRLIGKKTVRHPSTGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA*
Ga0116224_101690082	3300009683	Peatlands Soil	MAFRTRKIDSSKFDNGSGADAYAISDGDRLIGNKTVRYPATGPVVKITYQLGDQTFDSPDAFMTAYLKALMVAA*
Ga0116217_102273942	3300009700	Peatlands Soil	MAARFRTRIIDSQTFDDGSSADFYAISDGDRLIGNKTVRYPATGPVVKITYQLGDQTFDSPDAFMTAYLKALMVAA*
Ga0116134_10211453	3300009764	Peatland	MAFLTRKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGSVVTISYQLGDQTFDNPDAFMTTYLKALMVAG*
Ga0116134_13443731	3300009764	Peatland	MTFRTRIIDSSKFDDGSSTDVYEILDGDRLIGKKTVRHPATGPMVKITYQLGDQSFDNPDAFMTTYLKAQAENA*
Ga0116219_101889831	3300009824	Peatlands Soil	GSCVMAARFRTRIIDSQTFDDGSSADFYAISDGDRLIGNKTVRYPATGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA*
Ga0116223_100517814	3300009839	Peatlands Soil	VAFEPGLKEVLCKCGVKQRHSLTRKIDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDHTLDNPDDFMTTYLKAQVVTA*
Ga0116223_100521222	3300009839	Peatlands Soil	MAARFRTRLIDSQTFDDGSSADTYTISDGDRLIGKKTVRHPSTGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA*
Ga0116223_107111262	3300009839	Peatlands Soil	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDNPD
Ga0074045_109975911	3300010341	Bog Forest Soil	VAFEPGLKEVLCKCGVKQRHSLTRKIDSSKFDDGSSIDVYEISDGDRLIGKKTVRHPATGSVVKITYQLDDQTFDNPDAFMTAYLKAQAENA*
Ga0074044_100321246	3300010343	Bog Forest Soil	MVFRTRIIKSSKFDDGSSTDIYQISDGDRLIGNKTIRHPVTGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA*
Ga0136449_10005346716	3300010379	Peatlands Soil	MAMRFQTRRAEVQTFDDGSSAVVYTISDGDRLIGSKTIRYPATGPRIEITYQLGDQTFDNPDAFMMAYLKAHTVTA*
Ga0136449_1010857631	3300010379	Peatlands Soil	MVFWTRIIDSSKFDDGSSTNVYETSDGDRLIGNKTVQHPATGPVVKITYQLGDQTFDNPDAFMT
Ga0136449_1020518112	3300010379	Peatlands Soil	MAFLTRKIDSSKFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA*
Ga0136449_1028615612	3300010379	Peatlands Soil	MAFRTRKIDSSKFDNGSGADAYAISDGDRLIGNKTVQHPAAGPLVEITYQLGDQTFDNPDALMTAYLKALMVAG*
Ga0136449_1030378512	3300010379	Peatlands Soil	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDNPDAFMTTYLKALMAAG*
Ga0136449_1041152651	3300010379	Peatlands Soil	MAFLTRKIDSSKFDDGFSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDQTFDNPDDFMTTYLKAQAENA*
Ga0136449_1041177612	3300010379	Peatlands Soil	MAFRTRIIDSQTFDDGSSTDVYAISDGDRLIGNKTVQHPATGPVVKITYQLGDQTFDNPDAFMT
Ga0181533_11348802	3300014152	Bog	MAFLTRKIDSLKFDDGSSTDVYEISDGDRLIGKKTVRHPATGPAIKITYQLGDQTFDNPDDFMTTYLKAQAENA*
Ga0181524_105021471	3300014155	Bog	FLTRKIDSRAFDDGSSADVYEISDGDRLIGKKTVRHPATGPAIKITYQLGDQTFDNPDDFMTTYLKAQAENA*
Ga0181518_100617356	3300014156	Bog	MAFLTRKIDSSQFDDGSSTDVYEISDGDRLIGKKTVRHPATGLVVKITYQLGDQIFDNPDAFMATYLKAQAENA*
Ga0181538_104741421	3300014162	Bog	MAFLTRKIDSLKFDDGSSTDVYEISDGDRLIGKKTVRHAATGSVVKITHQLGDQTFDNPDAFMTTYLKALMVA
Ga0181532_104245311	3300014164	Bog	VSDHSGATTQWHSGHAKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA*
Ga0181535_105146061	3300014199	Bog	MAFLTRKIDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGPVVKITYQIGDQTFDSPDAFMTTYLKALMVAG*
Ga0181526_101296241	3300014200	Bog	KFDDGSSTDVYDISDGDRLIGKKTVRHPATGPVVKITYQIGDQTFDSPDAFMTTYLKAPAENV*
Ga0181526_107589471	3300014200	Bog	DGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0181536_101059802	3300014638	Bog	MAFLTRKIDSSQFDDGSSTDVYEISDGDRLIGKKTVGHPATRPVVKITYQLGDQSFDNPDAFMATYLKAQAENA*
Ga0181505_101925763	3300016750	Peatland	MAFLTRKIDSSTFDDGSSTDVYEISDGDRLIGKKTVRHPATGPVVKITYQLGDQAFDNPDAFMTAYLKAQAVTA
Ga0187802_103697131	3300017822	Freshwater Sediment	MVFRTRIIDTSKFDDGSSTDVYEISDGDRLKGYKTVRNPATGAPVEITYQLGDQTFDNPDAFMTAHLKAQAVTA
Ga0187856_11285672	3300017925	Peatland	MAMRFQTRLIESETFDDGSSADVYAISDGDRLIGKKTVRHPATGPVVKITYQLGDQTFDNPDAFMTTYLKALMVAG
Ga0187806_10458631	3300017928	Freshwater Sediment	MELAMAFRTRIIDSSKFDDGSSIDLYAISDGERLIGYKTVRNPATGAPVEITYQLGDQTFDNPDAFMTAHLKAQAVTA
Ga0187806_11359352	3300017928	Freshwater Sediment	MAFRTRIIDSSKFDDGSSTDVYEISDGDRLIGKKTLRHPATGSVVKITYQLGDQTFDNPDALMTAYLKAQAENE
Ga0187877_12294461	3300017931	Peatland	MAFLTRKIDSQTFDDGSSTNVYEISDGDRLIGKKMVRHPATGSVVTISYQLGDQTFDNPDAFMTTYLKALMVAG
Ga0187814_101844911	3300017932	Freshwater Sediment	MVFRTRIIDTSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGPVVKITYQLGDQTFDNPDAFMTTYLKAQAENA
Ga0187848_102848791	3300017935	Peatland	MVFRTRIVDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDQTFDNPDAFMTTYLKALMVAG
Ga0187854_101769732	3300017938	Peatland	MVFRTRIIESSKFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187853_105304261	3300017940	Peatland	MAFRTRKSDSLKFDDGSRTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187808_104031911	3300017942	Freshwater Sediment	MVFRTRIIDSRTFDDGSSTDVYEISDGDRPIGKKTVRHPAAGSVVKITYHLGDQTFDNPDDFMTTYLKAQAENA
Ga0187819_107616982	3300017943	Freshwater Sediment	MAFRTRIIDSSKFNDGSSTDVYEISDGERLIGYKTVRNPAAGAPVEITYQLGDQTFDNPDAFMTEYLKALMVTA
Ga0187879_100548652	3300017946	Peatland	MAFLTRKIDSLKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDQTFDNPDAFMTTYLKALMVAG
Ga0187879_100701624	3300017946	Peatland	MTFRTRIIDSSKFDDGSSTDVYEILDGDRLIGKKTVRHPATGPMVKITYQLGDQSFDNPDAFMTTYLKAQAENA
Ga0187879_101075012	3300017946	Peatland	MAFLTRKIDSQTFDDGSSTNVYEISDGDRLIGKKMVRHPATGSVVTITYQLGDQTFDNPGAFMTTYLKAQAENA
Ga0187879_101289693	3300017946	Peatland	MAFRTRKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187879_104326332	3300017946	Peatland	VAFEPGLKEVLCKCGVKQRHSLTRKIDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDHTLDNPDDFMTTYLKAQVVTA
Ga0187817_103384762	3300017955	Freshwater Sediment	MVFRTRKIDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187817_104297752	3300017955	Freshwater Sediment	MAFLTRKIDSSKFDDGSRTDVYEISDGDRLIGKKTVRHPATGSVVKISYQLGDQSFDNPDDFMTTYLKAQVVTA
Ga0187817_105177491	3300017955	Freshwater Sediment	TRIIDSRTFADGSSTDIYSILDGDRVIGTKTVRHPATGSVVTITYQLGGQSFDNPDAFMATYLKAQAKNA
Ga0187817_107464831	3300017955	Freshwater Sediment	MVFRTRIIDTSKFDDGSSTDVYEISDGDRLKGYKTVRNPATGAPVEITYQLGDQTLDNPDAFMTAHLKAQAVTA
Ga0187816_103063352	3300017995	Freshwater Sediment	MAFLTRKIDSSKFDDGSRTDVYEISDGDRLIGKKTVRHPATGSVVKISYQLGDQTFDNPDAFMTAHLKAQAVTA
Ga0187815_101622172	3300018001	Freshwater Sediment	MVFRTRMIDSSKLDDGSSTDVSEISDGDRLIGKKTVRHPATGPVVKITYQLGDQTFDNPDAFMTAYLKAQAENA
Ga0187815_104578442	3300018001	Freshwater Sediment	MTFRTRKIDSSKFDDSSSTDVYEISDGDRLIGKKTVRHPATGPVVKITYQLGDRTFDNPDAFMTTYLKAQAENA
Ga0187804_103386471	3300018006	Freshwater Sediment	MAFLTRKIDSSKFDDGSSTDVYEILDGDRLTGKKTARHPATGPGVEITYQLDDQTFDNPDAFMTA
Ga0187805_103103501	3300018007	Freshwater Sediment	KFDDGSSADVYEISDGDRLIGKKTVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLRAQAENA
Ga0187805_103866072	3300018007	Freshwater Sediment	MVFRTRMIDSSKLGDGSSTDVSEISDGDRLIGKKTVRHPATGPVVKITYQLGDQTFDNPDAFMTAHLKAQAVTA
Ga0187888_12883162	3300018008	Peatland	MVFRTRIIESSKFDDGSSTDVYEISDGDRLIGNKTVQHPAAGPLVEITYQLGDQTFDNPDAFMTAYLKALMVAAKLLDRCGG
Ga0187888_14149782	3300018008	Peatland	MAFLTRKIDSRAFDDGSSADVYEISDGDRLIGKKTVRHPATGPAIKSTYQLGDQTFDNPDDFMTTYLKAQAENA
Ga0187884_104124112	3300018009	Peatland	MAFLTRKIDSRAFDDGSSADVYEISDGDRLIGKKTVRHPATGPAIKITYQLGDQTFDNPDDFMTTYLKAQAENA
Ga0187873_13770831	3300018013	Peatland	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDNPDAFMTTYLKALMAAG
Ga0187880_11826581	3300018016	Peatland	MAFLTRKIDSRTFDFCKSKTAYEISDGDRLIGKKTVGHPATRPVVKITYQLGNQTFDRPDAFMRAYLKTQAENA
Ga0187880_12281381	3300018016	Peatland	VSDHSGATTQWHSGHAKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187872_100219508	3300018017	Peatland	MAFLTRKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187872_100813823	3300018017	Peatland	MAFLTRKIDSSKFDDCSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA
Ga0187874_101643682	3300018019	Peatland	MTFRTRIIDSSKFDDGSSTDVYEILDGDRLIGKKTVRHPATGPMVKITYQLGDQSFDTPDAFMTTYLKAQAENA
Ga0187874_104065822	3300018019	Peatland	MAFLTRKIDSRTFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDQTFDNPDAFMTTYLKALMVAG
Ga0187874_104738461	3300018019	Peatland	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDNPDAFMTTYLKAQAENA
Ga0187885_102620412	3300018025	Peatland	SDHSGATTQWHSGHAKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187857_101707903	3300018026	Peatland	FDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187857_104957631	3300018026	Peatland	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDNPDAFMTTYLKALMVAG
Ga0187867_104104901	3300018033	Peatland	MAFLTRKIDSRTFDDGSSTDVYEISDGDRLIGKKTVRHPASGSVVKITYQLGDRTFDNPDDFMTTYLKAQAENA
Ga0187875_102654072	3300018035	Peatland	VLCGVKQRHSLTRKIDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDHTLDNPDDFMTTYLKAQAENA
Ga0187883_100799572	3300018037	Peatland	HSGHAKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187883_105874981	3300018037	Peatland	VLCGVKQRHSLTRKIDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDHTLDNPDDFMTTYLKAQVVTA
Ga0187883_106524711	3300018037	Peatland	FLTRKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGSVVTISYQLGDQTFDNPDAFMTTYLKALMVAG
Ga0187862_102517971	3300018040	Peatland	MAFLTRKIDSQTFDDGSSTNVYEISDGDRLIGKKTVRHPATGPAIKITYQLGDQTFDNPDDFMTTYLKAQAENA
Ga0187871_107565262	3300018042	Peatland	MAFLTRKIDSLKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDQTFDNPDAFMMTYLKALMVAG
Ga0187851_108614991	3300018046	Peatland	VLCGVKQRHSLTRKIDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDHTLDNPDDFMTTYLKALMVAG
Ga0187772_103663992	3300018085	Tropical Peatland	MTFRTRKIGSSTFDDGSSTDVYEISDGDRLIGKKTVRHPASGSFVEIAYQLGDQSFDNPDAFMAAYLKAQAVTA
Ga0187771_111477372	3300018088	Tropical Peatland	MTFRTRKIDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPASGSFVEIAYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0187770_113568401	3300018090	Tropical Peatland	MTFRTRKIGSSTFDDGSSTDVYEISDGDRLIGKKTVRHPASGSFVEIAYQLGDQSFDNPDAFMTAYLKAPAVTG
Ga0187852_12813992	3300019082	Peatland	MAFLTRKIDSSKFDDGSSTDVSEISDGDRLIGKKTVRHPATGSVVKITYQLGDQSFDNPDAFMTTYLKAQAENA
Ga0208686_10278823	3300025500	Peatland	RTRKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGPVVKITYQLGDQSFDNPDAFMTAYLKAQAVTA
Ga0208686_10286573	3300025500	Peatland	MAFLTRKIDSSTFDDGSSTDVYEISDGDRLIGKKMVRHPATGSVVTISYQLGDQTFDNPDAFMTTYLKALMVAG
Ga0208696_11571862	3300027696	Peatlands Soil	MAARFRTRIIDSQTFDDGSSADFYAISDGDRLIGNKTVRYPATGPVVKITYQLGDQTFDSPDAFMTAYLKALMVAA
Ga0209517_105384302	3300027854	Peatlands Soil	MAFRTRKIDSSKFDNGSGADVYAISDGDRLIGNKTVQHPAAGPLVEITYQLGDQTFDNPDALMTAYLKALMVAG
Ga0316363_103484021	3300030659	Peatlands Soil	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDNPDAFMTTYLKALM
Ga0311301_100807992	3300032160	Peatlands Soil	MAMRFQTRRAEVQTFDDGSSAVVYTISDGDRLIGSKTIRYPATGPRIEITYQLGDQTFDNPDAFMMAYLKAHTVTA
Ga0311301_101711812	3300032160	Peatlands Soil	MVFWTRIIDSSKFDDGSSTNVYETSDGDRLIGNKTVQHPATGPVVKITYQLGDQTFDNPDAFMTAYLKAQVLSA
Ga0311301_110717092	3300032160	Peatlands Soil	MVFRTRIIDSSKFDDGSSADTYTISDGDRLIGKKTVRHPSTGPVVKITYQLGDQTFDNPDAFMTAYLKALMVAA
Ga0311301_121649402	3300032160	Peatlands Soil	MAFRTRKIDSSKFDDGSSADVYEISDGDRLIGKKTVRHPAIGPAVKITYQLADQTFDNPDAFMTAY
Ga0311301_123435202	3300032160	Peatlands Soil	MAFRTRKIDSSKFDDGSSTDVYEISDGDRLIGKKTVRHPATGPAVKITYQLGDQTFDNPDAFMTTYLKAQAENA
Ga0334790_084002_388_612	3300033887	Soil	MAFLTRKIDSQTFDDSSSTDVYEISDGDRLIGKKTVRHPATGSVVKITYQLGDQTFDNPDAFITAHLKALMVTA
Ga0334792_131974_2_220	3300033888	Soil	MVFRTRIIESSKFDDGSSTDVYEISDEDRLIGNKTVRHPATGPVVKITYQLGDQTFDNPDAFMATYLKALMVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences