Metagenome / Metatranscriptome Family F084992

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084992
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	93 residues
Representative Sequence	MSTTTQRLSSLLVATMFIVLLALMATFGVRSADAAQPVGGCPTGYELVTVKYVLKGTGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNNL
Number of Associated Samples	34
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.46 %
% of genes near scaffold ends (potentially truncated)	34.23 %
% of genes from short scaffolds (< 2000 bps)	89.19 %
Associated GOLD sequencing projects	33
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.468 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (69.369 % of family members)
Environment Ontology (ENVO)	Unclassified (69.369 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (81.081 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.23% β-sheet: 14.75% Coil/Unstructured: 59.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00072	Response_reg	1.80
PF00196	GerE	1.80
PF14023	DUF4239	1.80
PF00805	Pentapeptide	0.90
PF05995	CDO_I	0.90
PF01381	HTH_3	0.90
PF14690	zf-ISL3	0.90
PF13560	HTH_31	0.90
PF13358	DDE_3	0.90
PF05901	Excalibur	0.90
PF01610	DDE_Tnp_ISL3	0.90
PF13649	Methyltransf_25	0.90
PF01872	RibD_C	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.90
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.90
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.90
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.90
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
All Organisms	root	All Organisms	31.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
cellular organisms	root	All Organisms → cellular organisms	29.73 %
Viruses	superkingdom	All Organisms → Viruses	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	8.11 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.47 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	8.11 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805012\|FNTS067_GJ87FRN01EXW84	Not Available	512	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c035178	Not Available	905	Open in IMG/M
3300000858\|JGI10213J12805_10325707	Not Available	590	Open in IMG/M
3300000858\|JGI10213J12805_10626511	Not Available	586	Open in IMG/M
3300005535\|Ga0070684_101580090	Not Available	618	Open in IMG/M
3300005562\|Ga0058697_10046931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1642	Open in IMG/M
3300005562\|Ga0058697_10077864	Not Available	1331	Open in IMG/M
3300005562\|Ga0058697_10089572	Not Available	1256	Open in IMG/M
3300005562\|Ga0058697_10122905	Not Available	1103	Open in IMG/M
3300005562\|Ga0058697_10162790	Not Available	983	Open in IMG/M
3300005562\|Ga0058697_10469957	Not Available	636	Open in IMG/M
3300009789\|Ga0126307_10174927	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300009789\|Ga0126307_10237344	Not Available	1465	Open in IMG/M
3300009789\|Ga0126307_10240265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1456	Open in IMG/M
3300009789\|Ga0126307_10538708	Not Available	942	Open in IMG/M
3300009789\|Ga0126307_10714239	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300009789\|Ga0126307_10896494	Not Available	716	Open in IMG/M
3300009789\|Ga0126307_10991682	Not Available	679	Open in IMG/M
3300009789\|Ga0126307_11189642	Not Available	617	Open in IMG/M
3300009789\|Ga0126307_11381667	Not Available	571	Open in IMG/M
3300009840\|Ga0126313_10199182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1536	Open in IMG/M
3300009840\|Ga0126313_10204453	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1517	Open in IMG/M
3300009840\|Ga0126313_10225165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1447	Open in IMG/M
3300009840\|Ga0126313_10695082	Not Available	823	Open in IMG/M
3300009840\|Ga0126313_10734056	Not Available	801	Open in IMG/M
3300009840\|Ga0126313_10801186	Not Available	766	Open in IMG/M
3300009840\|Ga0126313_11459485	Not Available	568	Open in IMG/M
3300010036\|Ga0126305_10009854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	4772	Open in IMG/M
3300010036\|Ga0126305_10045500	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300010036\|Ga0126305_10115100	Not Available	1634	Open in IMG/M
3300010036\|Ga0126305_10247233	Not Available	1146	Open in IMG/M
3300010036\|Ga0126305_10347372	All Organisms → cellular organisms → Bacteria → Terrabacteria group	971	Open in IMG/M
3300010036\|Ga0126305_10939295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	591	Open in IMG/M
3300010036\|Ga0126305_11188853	Not Available	526	Open in IMG/M
3300010037\|Ga0126304_10053814	Not Available	2452	Open in IMG/M
3300010037\|Ga0126304_10204862	Not Available	1291	Open in IMG/M
3300010037\|Ga0126304_10447551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300010037\|Ga0126304_10904752	Not Available	600	Open in IMG/M
3300010037\|Ga0126304_11248903	Not Available	510	Open in IMG/M
3300010038\|Ga0126315_10037112	All Organisms → Viruses → Predicted Viral	2574	Open in IMG/M
3300010038\|Ga0126315_10040236	All Organisms → cellular organisms → Bacteria	2488	Open in IMG/M
3300010038\|Ga0126315_10124292	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300010038\|Ga0126315_10152925	Not Available	1367	Open in IMG/M
3300010038\|Ga0126315_10158652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1343	Open in IMG/M
3300010038\|Ga0126315_10190862	Not Available	1230	Open in IMG/M
3300010038\|Ga0126315_10244105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1094	Open in IMG/M
3300010038\|Ga0126315_10483737	All Organisms → cellular organisms → Bacteria → Terrabacteria group	788	Open in IMG/M
3300010038\|Ga0126315_10728197	Not Available	649	Open in IMG/M
3300010038\|Ga0126315_11069517	Not Available	543	Open in IMG/M
3300010039\|Ga0126309_10007377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	4366	Open in IMG/M
3300010039\|Ga0126309_10075155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1683	Open in IMG/M
3300010040\|Ga0126308_10039704	Not Available	2680	Open in IMG/M
3300010040\|Ga0126308_10227951	Not Available	1205	Open in IMG/M
3300010040\|Ga0126308_10316202	Not Available	1029	Open in IMG/M
3300010040\|Ga0126308_10535048	Not Available	794	Open in IMG/M
3300010040\|Ga0126308_10689630	Not Available	701	Open in IMG/M
3300010040\|Ga0126308_10856465	Not Available	632	Open in IMG/M
3300010041\|Ga0126312_10356713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1036	Open in IMG/M
3300010041\|Ga0126312_10589676	Not Available	798	Open in IMG/M
3300010041\|Ga0126312_10957415	Not Available	625	Open in IMG/M
3300010041\|Ga0126312_11407759	Not Available	517	Open in IMG/M
3300010042\|Ga0126314_10031583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	3320	Open in IMG/M
3300010042\|Ga0126314_10072959	Not Available	2285	Open in IMG/M
3300010042\|Ga0126314_10112460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1863	Open in IMG/M
3300010042\|Ga0126314_10379054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1017	Open in IMG/M
3300010042\|Ga0126314_10496657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	885	Open in IMG/M
3300010042\|Ga0126314_10573617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	822	Open in IMG/M
3300010042\|Ga0126314_10904685	Not Available	652	Open in IMG/M
3300010042\|Ga0126314_11202406	Not Available	566	Open in IMG/M
3300010042\|Ga0126314_11434403	Not Available	519	Open in IMG/M
3300010044\|Ga0126310_10206897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1295	Open in IMG/M
3300010044\|Ga0126310_10310312	All Organisms → cellular organisms → Bacteria → Proteobacteria	1090	Open in IMG/M
3300010044\|Ga0126310_10558261	Not Available	847	Open in IMG/M
3300010044\|Ga0126310_10631058	Not Available	803	Open in IMG/M
3300010044\|Ga0126310_11385248	Not Available	572	Open in IMG/M
3300010045\|Ga0126311_10003581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	8035	Open in IMG/M
3300010045\|Ga0126311_10223297	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1385	Open in IMG/M
3300010045\|Ga0126311_10227953	Not Available	1372	Open in IMG/M
3300010045\|Ga0126311_10535582	Not Available	920	Open in IMG/M
3300010045\|Ga0126311_10767249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	775	Open in IMG/M
3300010045\|Ga0126311_11332435	Not Available	597	Open in IMG/M
3300010045\|Ga0126311_11408050	Not Available	582	Open in IMG/M
3300010045\|Ga0126311_11439311	Not Available	576	Open in IMG/M
3300010045\|Ga0126311_11728563	Not Available	529	Open in IMG/M
3300010166\|Ga0126306_10109545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2008	Open in IMG/M
3300010166\|Ga0126306_10324297	Not Available	1191	Open in IMG/M
3300010166\|Ga0126306_10568872	Not Available	901	Open in IMG/M
3300010166\|Ga0126306_11163651	Not Available	633	Open in IMG/M
3300018465\|Ga0190269_10664166	Not Available	720	Open in IMG/M
3300018466\|Ga0190268_10467426	Not Available	842	Open in IMG/M
3300018466\|Ga0190268_10557482	Not Available	798	Open in IMG/M
3300018466\|Ga0190268_10863959	Not Available	697	Open in IMG/M
3300018875\|Ga0193608_1063479	Not Available	818	Open in IMG/M
3300018877\|Ga0193600_1114440	Not Available	625	Open in IMG/M
3300018877\|Ga0193600_1117645	Not Available	614	Open in IMG/M
3300018890\|Ga0193595_1172989	Not Available	567	Open in IMG/M
3300018910\|Ga0193598_1136742	Not Available	556	Open in IMG/M
3300018918\|Ga0193616_1130617	Not Available	694	Open in IMG/M
3300018920\|Ga0190273_11037429	Not Available	680	Open in IMG/M
3300018946\|Ga0193599_1059531	All Organisms → Viruses → Predicted Viral	1328	Open in IMG/M
3300019132\|Ga0193604_1005243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2630	Open in IMG/M
3300019377\|Ga0190264_10138236	Not Available	1230	Open in IMG/M
3300019377\|Ga0190264_10288713	Not Available	984	Open in IMG/M
3300027638\|Ga0208612_1133928	Not Available	620	Open in IMG/M
3300030496\|Ga0268240_10047923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	909	Open in IMG/M
3300031092\|Ga0308204_10226688	Not Available	595	Open in IMG/M
3300031852\|Ga0307410_11125237	Not Available	682	Open in IMG/M
3300031995\|Ga0307409_100220261	Not Available	1713	Open in IMG/M
3300032159\|Ga0268251_10122087	Not Available	954	Open in IMG/M
3300032159\|Ga0268251_10231561	Not Available	738	Open in IMG/M
3300032159\|Ga0268251_10307909	Not Available	659	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.09%
Host-Associated	Host-Associated	9.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.19%
Plants	Host-Associated → Plants	9.91%
Aquatic	Environmental → Aquatic	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.19%
Phylloplane	Host-Associated → Plants → Phylloplane	8.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.80%
Freshwater	Environmental → Aquatic → Freshwater	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.28%
Sand	Environmental → Terrestrial → Soil → Sand	9.01%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.80%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Loam	Environmental → Terrestrial → Soil → Loam	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	77.48%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	9.01%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	8.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.90%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	69.37%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	9.01%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.80%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805012	Soil microbial communities from sample at FACE Site NTS_067 Nevada Test Site	Environmental	Open in IMG/M
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018877	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018890	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, bundles v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300019132	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS067_00365590	2119805012	Soil	AMSTSQRLSILLVATMFIVLIALMATFGVRSADAAQGPPVQAQGPPIGGCPASFEPGLVPVEAVLAGAGLEDPDPSMDPNGDGQTCLKLLHTGSGTRATWHDNVITR
LCrCPGB2aDRAFT_0351781	3300000095	Soil	MPTTQRLSSLLVATMFIVLLALMATFGVRSADAAQGPPVQAQGPPIGGCPASYEPEGNEPGGLVPVEVVLRGAPLEEADASLDPNGDGYTCLKLLDTGAGTRATWHDNVITR*
JGI10213J12805_103257072	3300000858	Soil	MSTTQRLSSLLVATMFFVLLALMATFGVRSAEAAQPVGGCPTGYELVTVKFVLKGANLEEPDPSMDRNGDGYTCLKLLDTGSGTRATWHDNNL*
JGI10213J12805_106265112	3300000858	Soil	MSTTTQRLSSLLVATMFIVLLALMVTFGVRSAEAAQPVGECPASYEPGLVTVKFVLKGTGLEEPDPSMDPNGDGYTCLKLLDTGSGTRATWHDNNL*
Ga0070684_1015800901	3300005535	Corn Rhizosphere	MSTTTKRLSSLLVATMFVVLIALMATFGVRSADAAQPVGGCPAGYELVTVKYIVKNAPLEEPDPSMDAVNGDGYTCLMLLHTGSGTRATWHDNTL*
Ga0058697_100469311	3300005562	Agave	TTTQRLSSLLVATMFIVLFALMVTFGVRSAGAAQPVGGCPTGYELVTVKFVLKGANLEEPDPSMDGNGDGYTCLKLLDTGSGTRATWHDNNL*
Ga0058697_100778644	3300005562	Agave	LMVTFGVRSADAAQPVGECPTGYELVTVKYVLKGTGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNNL*
Ga0058697_100895722	3300005562	Agave	MSTTTTQRLSSLLVATLFIVLLALMATFGVRTADAAQPVGGCPPGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0058697_101229052	3300005562	Agave	MSTTTQRLSSLLVATMFIVLLALMATFGVRSADAAQPVGGCPTGYELVTVKYVLKGTGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNNL*
Ga0058697_101627901	3300005562	Agave	MSTTAQRLSSLLVATMFIVLLALMATFGVRSADAAQPVGGCPTGYELVTVKFVLKGANLEEPDPSMDPNGDGYTCLKLLDTGSGTRATWHDNNL*
Ga0058697_104699571	3300005562	Agave	MSTTTQRLSSLLVATMFIVLLALMVTFGVRSADAAQPVGGCPTGYELVTVKYVLKGANLEEPDPSMDGNGDGYTCLKLLDTGSGTRATWHDNNL*
Ga0126307_101749272	3300009789	Serpentine Soil	MSTTQRLSSLLVATLFIVLLALMVTFGVRSADAAQPVGECPESYEPGLVTVKFVLKGAGLDEPDPSMDPNGDGYTCLKLLDTGAGTRATWHDNNL*
Ga0126307_102373442	3300009789	Serpentine Soil	MSTTQRLASLLVATLFIVLLALMATFGVRSADAQGPPAQAQGPPVGGCPASYEPGLVPVEVVLAGAGLEEPDPSMDPNGDGYTCLNVFDTGQGRRATWHDNVTPL*
Ga0126307_102402651	3300009789	Serpentine Soil	MSTTTTQRLSSLLVATMFIVLLALMATFGVRSAEAAQPVGECPESYEPGLVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126307_105387081	3300009789	Serpentine Soil	QRLSSLLVATMFIVLLALMATFGVRSADAAPPVGGCPPGYDLVPVEVVVAGAGLEEPDPSMDPNGDGLTCLKILHTGSGTRATWHDNVTPL*
Ga0126307_107142391	3300009789	Serpentine Soil	GVRSADAAQPVGECPTGYDLVRNKVVLEGANLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126307_108964941	3300009789	Serpentine Soil	MFIVLLALTVTFGVRSADAAQPVGECPTGYDLVRNKVVLEGAGLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNT
Ga0126307_109916821	3300009789	Serpentine Soil	MFIVLLTLMATFGVRSADAAQPVGECPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKLLDTGAGTRATWHDNTL*
Ga0126307_111896422	3300009789	Serpentine Soil	MFIVLLALMATFGVRSADAAQPVGECPTGYELVTVKYIVKNAPLEEPDPSMDAVNGDGYTCLKLLGTGAGTRATWHDNTL*
Ga0126307_113816672	3300009789	Serpentine Soil	MSTTTQRLSSLLVATLFIVVLALMATFGVRSAEAAQPVGECPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKLLDTGAGTRATWHDNTL*
Ga0126313_101991823	3300009840	Serpentine Soil	MSTTTTQRLSRLLVATLFIVLLALMATLGVRSADAAQPVGECPTGYELVTVKYGLKGANLEEPDPSMDGNGDGYTCLKILDTGAGTRATWHDNNL*
Ga0126313_102044532	3300009840	Serpentine Soil	MSTTQRLSSLLVATLFIVLLALMVTFGVRSAEAAQPVGECPESYEPGLVTVKFVLKGAGLDEPDPSMDPNGDGYTCLKLLDTGAGTRATWHDNNL*
Ga0126313_102251652	3300009840	Serpentine Soil	MSTTTTQRLSSLLVATMFIVLLALMATFGVRSAEAAQPVGECPESYEPGLVTVKYVVKNAPLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126313_106950822	3300009840	Serpentine Soil	MSTTTQRLSSLLVATLFIVLLALMATFGVRSADAAQPIGECPESYEPGLVTVKFVLKGAGLDEPDPSMDPNGDGYTCLKLLDTGAGTRATWHDNNL*
Ga0126313_107340561	3300009840	Serpentine Soil	MFIVLLALMVTFGVRSADAAQPVGECPEGYDLVRNKVVLKGAGLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126313_108011861	3300009840	Serpentine Soil	MSTTTQRLSSLLVAALFIVLLALMATLGARSADAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLEGAGLEEPDPSMDPNGDGFTCLKILDTGSGTRATWHDNVTPL*
Ga0126313_114594851	3300009840	Serpentine Soil	MSTTTKRLSSLVVATLFIVLIALMATFGVRSADAAQPVGGCPTGYDLVTVKYVLKHTGDEAPDPSMDINGDGYTCLKVLTPQNNHATWHDNNL*
Ga0126305_100098541	3300010036	Serpentine Soil	MSTTTQRLSSLLVATMFIVLLALMATFGVRSADAAPPVGGCPPGYDLVPVEVVVAGAGLEEPDPSMDPNGDGLTCLKILHTGSGTRATWHDNVTPL*
Ga0126305_100455001	3300010036	Serpentine Soil	MSTTTQRLSSLLVATLFIVLLALMATFGVRSAAAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLAGAGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNVTPL*
Ga0126305_101151001	3300010036	Serpentine Soil	VLLALMATFGVRSADAAQEPIGGCPTGYDLVTVKYVLKGAGLDEPDPSMDINGDGWTCLEILDTGSGTRATWHDNNL*
Ga0126305_102472332	3300010036	Serpentine Soil	VMIAFMATFGVRSADAAQPVGECPTGYDLVTVKYIVKNAPLEEPDSSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126305_103473721	3300010036	Serpentine Soil	MSTTQRLSSLLVATLIIVLLALMVTFGVRSADAAQPVGECPESYEPGLVTVKFVLKGAGLDEPDPSMDPNGDGYTCLKLLDTGAGTRATWHDNNL*
Ga0126305_109392951	3300010036	Serpentine Soil	TFGVRSADAAQPVGGCPTGYDLVTVKYVLKHTGDEEPDPSMDINEDGWTCLKVLTPQNNHATWHDNNL*
Ga0126305_111888531	3300010036	Serpentine Soil	TTQRLSSLLVATLFIVVLALMATFGVRSAAAQEGPPVGGCPPGYQLVTVEVVLAGAGLEEPDPSMDPNGDGLTCLKILDTGSGTRATWHDNVIPA*
Ga0126304_100538142	3300010037	Serpentine Soil	MFIVLLALTVTFGVRSADAAQPVGECPTGYDLVRNKVVLEGAGLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126304_102048621	3300010037	Serpentine Soil	MSTTTQRLSSLLVATLFIVVLALMATFGVRSAAAQEGPPVGGCPPGYQLVTVEVVLAGAGLEEPDPSMDPNGDGLTCLKILDTGSGTRATWHDNVIPA*
Ga0126304_104475511	3300010037	Serpentine Soil	KEVHAMSTTTQRLSSLLVATLFIVVLALMATFSVRSADAQEGPPIGGCPESYEPGLVPVEVVLEGAGLEEPDPSMDPNGDGFTCLKILDTGSGTRATWHDNVTPL*
Ga0126304_109047521	3300010037	Serpentine Soil	MFIVLLALMVTFGVRSADAAQPVGECPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDN
Ga0126304_112489031	3300010037	Serpentine Soil	MFIVLLALMVTFGVRSAEAAQPVGECPEGYDLVRNKVVLKGAGLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL
Ga0126315_100371123	3300010038	Serpentine Soil	MSTTQRLSSLLVATMFIVLLALMVTFGVRSAEAAQPVGECPTGYELVTVKFVLKGTGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNNL*
Ga0126315_100402361	3300010038	Serpentine Soil	MEVHAMSTTTTQRLSRLLVATLFIVMLALMATLGVRSADAAQPVGECPTGYELVTVKYGLKGANLEEPDPSMDGNGDGYTCLKILDTGAGTRATWHDNN
Ga0126315_101242923	3300010038	Serpentine Soil	MSTTTQRLSSLLVATLFIVVLALMATFSVRSADAQEGPPIGGCPESYEPGLVPVEVVLEGAGLEEPDPSMDPNGDGFTCLKILDTGSGTR
Ga0126315_101529251	3300010038	Serpentine Soil	MSTTTQRLSSLLVATLFIVLLALMATFGVRSAAAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLAGAGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHD
Ga0126315_101586521	3300010038	Serpentine Soil	MSTTQRRSSLLVATMFIVLLALMATFGVRSAEAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLEGAGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNVTPL*
Ga0126315_101908621	3300010038	Serpentine Soil	MFIVLLALMATFGVRSAEAAQPVGECPESYEPGLVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126315_102441052	3300010038	Serpentine Soil	MSTTTQRLSSLLVATMFIVLLALMVTFGVRSADAAQPVGGCPTGYELVTVKYVLKGANLAEPDPSMDGNGDGYTCLKLLDTGSGTRATWHDNNL*
Ga0126315_104837371	3300010038	Serpentine Soil	MSTTTQRLSSLLVATLFIVLLALMATLGARSADAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLEGAGLEEPDPSMDPNGDGFTCLKILDTGSGTRATWHDNVTPL*
Ga0126315_107281971	3300010038	Serpentine Soil	LLVATLFIVVLALMATFGVRSAEAAQPVGECPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKLLDTGAGTRATWHDNTL*
Ga0126315_110695171	3300010038	Serpentine Soil	MSTTQRLSSLLVATLFIVLLALMATFGVRSAAAQEGPPVGGCPPGYQLVTVEVVLAGAGLEEPDPSMDPNGDGLTCLKILDTGSGTRATWHDNVIPA*
Ga0126309_100073775	3300010039	Serpentine Soil	MFIVLLALMATFGVRSADAAQPVGECPTGYELVTVKYIVKNAPLEEPDPSMDAANGDGYTCLKLLDTGAGTRATWHDNTL*
Ga0126309_100751552	3300010039	Serpentine Soil	MSTTQRLSGLLVATVFFVLLALMVTFGVRSADAQGPPVGGCPPGYDLVTVQFVLNGTGLSQPDPSMDPNGDGMTCLKILHTGSGTRATWHDNTFPQ*
Ga0126308_100397044	3300010040	Serpentine Soil	MPTTTQRLSSLLVATLFIVVLALMATFGVRSAAAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLAGAGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNVTPL*
Ga0126308_102279511	3300010040	Serpentine Soil	MSTTTQRLSSLLVATLFIVVLALMATFGVRSADAAQPVGECPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKLLDTG
Ga0126308_103162021	3300010040	Serpentine Soil	EEKRSWISYARYIRVVLQRTKEVHAMSTTTQRLSSLLVATLFIVLLALMATFGVRSAEAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLEGAGLEEPDPSMDPNGDGFTCLKILDTGSGTRATWHDNVTPL*
Ga0126308_105350482	3300010040	Serpentine Soil	MFIVLLALMATFGVRSADAAQPVGECPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126308_106896301	3300010040	Serpentine Soil	QRLSSLLVATLFIVLLALMATFGVRSAEAAQPVGECPASYEPGLVTVKFVLKGAGLDEPDPSMDGNGDGYTCLKLLDTGSGTRATWHDNNL*
Ga0126308_108564651	3300010040	Serpentine Soil	LSSLLVATMFIVLLALMATFGVRSADAAQPIGGCPPEYDLVTVKYVLKHTGLEEPDPSMDTNGDGYTCLKVLTPQNNHATWHDNNL*
Ga0126312_103567131	3300010041	Serpentine Soil	TTQRLSSLLVATMFIVLLALMVTFGVRSANAAQPVGGCPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126312_105896761	3300010041	Serpentine Soil	KEVHAMSTTTQRLSSLLVATLFIVVLALMATFGVRSAEAAQPIGECPASYEPGLVTVKFVLKGAGLEEPDPSMDPNGDGYTCLKLLDTGSGTRATWHDNNL*
Ga0126312_109574151	3300010041	Serpentine Soil	MSTTQRLSGLLVATVFFVLLALMVTFGVRSANAAQPIGECPTGYDLVTVKYVLKHTGLTEPDPSMDSNGDGYTCLKVLT
Ga0126312_114077591	3300010041	Serpentine Soil	LVATMFIVLLALMVTFGVRSADAAQPVGECPEGYDLVRNKVVLKGAGLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126314_100315834	3300010042	Serpentine Soil	MSTTQRLSSLLVATMFIVLLALMATFGVRSAEAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLEGAGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNVTPL*
Ga0126314_100729591	3300010042	Serpentine Soil	MSTTQRLASLLVATLFIVLLALMATFGVRSADAQGPPAQAQGPPVGGCPASYEPGLVPVEVVLAGAGLEEPDPSMDPNGDGFTCLKILDTG
Ga0126314_101124603	3300010042	Serpentine Soil	MSTTTKRLSSLVVATLFIVLLALMATVGVRSADAAQPVGGCPTGYDLVTVKYVLKHTGDEAPDPSMDINGDGYTCLKVLTPQNNHATWHDNNL*
Ga0126314_103790541	3300010042	Serpentine Soil	ATLFIVVLALMATFGVRSADAAQPVGGCPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL*
Ga0126314_104966571	3300010042	Serpentine Soil	MSTTTQRLSSLLVATLFIVVLALMATFSVRSADAQEGPPIGGCPESYEPGLVPVEVVLEGAGLEEPDPSMDPNGDGFTCLKILDTGSGTRATWHDNVTPL*
Ga0126314_105736171	3300010042	Serpentine Soil	MFIVLLALMATFGVRSAEAAQPVGECPTGYELVTVKYIVKNAPLEEPDPSMDPNGDGYTCLKILHTGAGTRATWHDNTL*
Ga0126314_109046852	3300010042	Serpentine Soil	MEVHAMSTTTTQRLSRLLVATLFIVMLALMATLGVRSADAAQPVGECPTGYELVTVKYVLKGANLEEPDPSMDGNGDGYTCLKILDTGAGTRATWHDNNL*
Ga0126314_112024061	3300010042	Serpentine Soil	KEVHAMSTTQRLSSLLVATLFIVLLALMATFGVRSAAAQEGPPVGGCPPGYQLVTVEVVLAGAGLEEPDPSMDPNGDGLTCLKILDTGSGTRATWHDNVIPA*
Ga0126314_114344031	3300010042	Serpentine Soil	VATLFIVVLALMATFGVRSAEAAQPVGECPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKLLDTGAGTRATWHDNTL*
Ga0126310_102068972	3300010044	Serpentine Soil	MFIVVLALMATFGVRSADAAQPVGGCPAGYELVTVKYVVKNAPLEEPDPSMDHNGDGYTCLKLLDTGSGTRATWHDNTL*
Ga0126310_103103121	3300010044	Serpentine Soil	MFIVLLALMATFGVRSADAAQPVGECPSGYELVTVKYIVKNAPLEEPDPSMDAANGDGYTCLKLLHTGAGTRATWHDNTL*
Ga0126310_105582611	3300010044	Serpentine Soil	MSTTQRRSSLLVATMFIVLLALMATFGVRSADAQGPPVGGCPASYEPGLVPVEVVLAGAGLEEPDPSMDPNGDGYTCLKILHTGSGTRATWHDNVTPL*
Ga0126310_106310581	3300010044	Serpentine Soil	MFIVMIALMATFGVRSADAAQPVGGCPAGYELVTVKYIVKNAPLEEPDPSMDAVNGDGYTCLMLLHTGSGTRATWHDNTL*
Ga0126310_113852481	3300010044	Serpentine Soil	KEVHAMSTTTQRLSSLLVATMFIVLLALMATFGVRSADAAQPIGGCPPEYDLVTVKYVLKHTGLEEPDPSMDTNGDGYTCLKVLTLQNNHATWHDNNL*
Ga0126311_100035811	3300010045	Serpentine Soil	MSTTRRLSSLLVATVFLVLLALMATFGVRSADAAQEPIGGCPTGYDLVTVKYVLKGAGLDEPDPSMDINGDGWTCLEILDTGSGTRATWHDNNL*
Ga0126311_102232971	3300010045	Serpentine Soil	MSTTQRLSSLLVATLFIVLLALMATFGVRSAEAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLEGAGLEEPDPSMDPNGDGFTCLKILDTGSGTRATWHDNVTPL*
Ga0126311_102279532	3300010045	Serpentine Soil	MPTTTQRLSSLLVATLFIVLLALMATFGVRSAAAQGPPDQAQGPPVGGCPASYEPGLVPVEVVLAGAGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNVTPL*
Ga0126311_105355822	3300010045	Serpentine Soil	MFIVVLALMATFGVRSADAAQPVGGCPTGYELVTVKYVVKNAPLEEPDPSMDHNGDGYTCLKLLDTGSGTRATWHDNTL*
Ga0126311_107672491	3300010045	Serpentine Soil	MFIVLLVLMATFGVRSAEAAQPVGECPTGYELVTVKYIVKNAPLEEPDPSMDPNGDGYTCLKILHTGAGTRATWHDNTL*
Ga0126311_113324351	3300010045	Serpentine Soil	TKEVHAMSTTTQRLSSLLVATMFIVLLALMATFGVRSADAAPPVGGCPPGYDLVPVEVVVAGAGLEEPDPSMDPNGDGLTCLKILHTGSGTRATWHDNVTPL*
Ga0126311_114080501	3300010045	Serpentine Soil	MSTTTKRLSSLVVATLFIVLIALMATVGVRSADAAQPVGECPTGYELVTVKYIVKNAPLEEPDPSMDAVNGDGYTCLKLLGTGSGTRATWHDNTL*
Ga0126311_114393111	3300010045	Serpentine Soil	TKEVHAMSTTTQRLSSLLVATMFIVLLALMATFGVRSADAAQPIGGCPPEYDLVTVKYVLKHTGLEEPDPSMDTNGDGYTCLKVLTPQNNHATWHDNNL*
Ga0126311_117285631	3300010045	Serpentine Soil	MSTTQRLSGLLVATVFFVLLALMVTFGVRSANAAQPIGECPTGYDLVTVKYVLKHTGLTEPDPSMDSNGDGYTCLKVLTPQDNHATWHDNNL*
Ga0126306_101095452	3300010166	Serpentine Soil	MSTTRRLSSLLVATVFLVLLALMATFGVRSADAAQEPIGGCPTGYELVTVKYVLKGAGLDEPDPSMDINGDGWTCLEILDTGSGTRATWHDNNL*
Ga0126306_103242971	3300010166	Serpentine Soil	MFIVLLALTVTFGVRSADAAQPVGECPTGYDLVRNKVVLEGAGLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNIL*
Ga0126306_105688721	3300010166	Serpentine Soil	MSTTTQRLSSLLVATLFIVLLALMATLGVRSADAAQPVGECPTGYELVTVKYVLKGANLEEPDPSMDGNGDGYTCLKILDTGAGTRATWHDNNL*
Ga0126306_111636512	3300010166	Serpentine Soil	MSTTTKRLSSLLVATLFIVLIALMATVGVRSADAAQPVGGCPAGYELVTVKYIVKNAPLEEPDPSMDAVNGDGYTCLMLLHTGAGTRATWHDNTL*
Ga0190269_106641661	3300018465	Soil	MSTTQRLSSLLVATLFIVLLALMVTFGVRSAAAQGPPDQAQGPPVGGCPASYDPGLVPFEVVLEGAGLEEPDPSMDPNGAGFTCLKILDTGSGTRATWHDNVTPL
Ga0190268_104674261	3300018466	Soil	MSTTQRLSSLLVATMFIVLLALMVTFGVRSADAAQPVGDCPTGYELVRNKVVLKGAGLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL
Ga0190268_105574821	3300018466	Soil	AMSTATKRLSSLLVATMFIVLIALIATFEVRSADAAQPVGGCPTGYELVTVKYIVKNAPLEEPDPSMDAVNGDGYTCLKLLDTGSGTRATWHDNVTPL
Ga0190268_108639591	3300018466	Soil	MSTTQRLSSLLVATMFFVLLALMATFGVRSAEAAQPVGGCPTGYELVTVKFVLKGANLEEPDPSMDRNGDGYTCLKLLDTGSGTRATW
Ga0193608_10634791	3300018875	Soil	MSTTQRLSGLLVATMFIVLLALMATFGVRSADAAPQGPPVGGCPASFEPGLVPVEVVLAGAGLEEPDASMDPNGDGQTCLKLLDTGQGTRATWHDNVISR
Ga0193600_11144401	3300018877	Soil	TMLFVVLALMAMFGVRSATAQEGPPVGGCPPGYELVPVEVVLEGAGLEEPDPSMDRNEDGLTCLKLLDTGAGTRATWHDNVIPR
Ga0193600_11176451	3300018877	Soil	MSTTQRLSGLLVATMFIVLIALMATFGVRSADAAPQGPPVGGCPASFEPGLVPVEVVLAGAGLEEPDASMDPNGDGLTCLKLLDTGSSTRATWHDNVITR
Ga0193595_11729891	3300018890	Soil	MSTTQRLSGLLVATMFIVLIALMATFGVRSADAAPQGPPVGGCPASFEPGLVPVEVVLEGAGLEEPDASMDPNGDGLTCLKLLDTGSGTRATWHDNVITR
Ga0193598_11367422	3300018910	Soil	MSTTQRLSVLLVATMFIVLIALMATFGVRSADAAPQGPPVGGCPASFEPGLVPVEVVLEGAGLEEPDASMDPNGDGLTCLKLLDTGSGTRATWHDNVITR
Ga0193616_11306171	3300018918	Soil	MSTTQRLSGLLVATMFIVLLALMATFGVRSADAAPQGPPVGGCPASFEPGLVPVEVVLEGAGLEEPDASMDPNGDGLTCLKLLDTGSGTRATWHDNVITR
Ga0190273_110374292	3300018920	Soil	MSTTTKRLSIWLVATMFIVLIALMATVGVRSADAAQPVGGCPTGYELVTVKYIVKNAPLEEPDPSMDAVNGDGYTCLMLLHTGSGTRATWHDNTL
Ga0193599_10595311	3300018946	Soil	MSTTQRLSGLLVATMFIVMIALMATFGVRSADAAPQGPPVGGCPASFEPGLVPVEVVLEGAGLEEPDASMDPNGDGLTCLKLLDTGSGTRATWHDNVITR
Ga0193604_10052431	3300019132	Soil	MSTTQRLSGLLVATMFIVLIALMATFGVRSADAAPQGPPVGGCPASYEPGLVPVRVVLEGAGLEEPDASMDPNGDGLTCLKLLDTGSGTRATWHDNVITR
Ga0190264_101382362	3300019377	Soil	MSTTTQRLSSLLVATLFIVLLALMATFGVRSADAAQGPPPQALGPPIGGCPASYEPGPVPVEVVLKGAGLTEPDASMDPNGDGWTCLKVITTGQGRRASWHDNVITH
Ga0190264_102887132	3300019377	Soil	MSTTTQRLSSLLVATLFIVLLALMATFGVRSADAAQPVGGCPPGYELVTVKYVVKNAPLEEPDPSMDHNGDGYTCLKLLDTGSGTRATWHDNTL
Ga0208612_11339281	3300027638	Polar Desert	LAGRYNVFVLLARMTTFGVRSAAAQGPPVQAQSPPVGGCPASYEPGLVPVEVVLAGAGLDEPDPSMDPNGDGMTCLKLLHTGSGTRATWHDNVIRA
Ga0268240_100479231	3300030496	Soil	ALMVTFGVRSADAAQPVGGCPTGYELVTVKYVLKGANLAEPDPSMDGNGDGYTCLKLLDTGSGTRATWHDNTL
Ga0308204_102266881	3300031092	Soil	MSTTTTKRLSSLLVATMFIVLLALMATFGVRSADAAQPVGECPSGYELVTVKYIVKNAPLEEPDPSMDAVNGDGYTCLKLLHTGAGTRATWHDNTL
Ga0307410_111252371	3300031852	Rhizosphere	MSTTTQRLSSLLVATMFIVLLALMATFGVRSADAAQPVGECPTGYELVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKLLDTGAGTRATWHDNTL
Ga0307409_1002202613	3300031995	Rhizosphere	MSTTTTQRLSSLLVATLFIVLLALMATFGVRSAEAAQPVGECPESYEPGLVTVKYVVKNAPLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL
Ga0268251_101220871	3300032159	Agave	MSTTIQRLSSLLVATMFIVLLALMVTFGVRSADAAQPVGGCPTGYELVTVKYVLKGANLEEPDPSMDPNGDGYTCLKLLDTGSGTRATWHDNNL
Ga0268251_102315611	3300032159	Agave	MSTTTQRLSSLLVATMFIVLLALMATFGVRSADAAQPVGGCPTGYELVTVKYVLKGTGLEEPDPSMDPNGDGYTCLKILDTGSGTRATWHDNNL
Ga0268251_103079091	3300032159	Agave	MSTTQRLSSLLVATMFIVLLALMVTFGVRSADAAQPVGECPEGYDLVRNKVVLKGAGLEEPDPSMDGNGDGYTCLKILDTGSGTRATWHDNTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084992

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences