Metagenome Family F084990

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084990
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	58 residues
Representative Sequence	GRSGQYRVDRLIMRYGIDAKLFDWSDEITADCPRKQARNLNDQCGARCPDLSKVV
Number of Associated Samples	51
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.04 %
% of genes near scaffold ends (potentially truncated)	68.47 %
% of genes from short scaffolds (< 2000 bps)	93.69 %
Associated GOLD sequencing projects	46
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.676 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (31.532 % of family members)
Environment Ontology (ENVO)	Unclassified (41.441 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.676 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.10% β-sheet: 0.00% Coil/Unstructured: 75.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00126	HTH_1	1.80
PF00805	Pentapeptide	0.90
PF13191	AAA_16	0.90
PF00891	Methyltransf_2	0.90
PF13676	TIR_2	0.90
PF07813	LTXXQ	0.90
PF04392	ABC_sub_bind	0.90
PF03631	Virul_fac_BrkB	0.90
PF04909	Amidohydro_2	0.90
PF13360	PQQ_2	0.90
PF11953	DUF3470	0.90
PF12728	HTH_17	0.90
PF16864	Dimerisation2	0.90
PF00589	Phage_integrase	0.90
PF12833	HTH_18	0.90
PF00563	EAL	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.60
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.90
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.90
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.90
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.90
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.90
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.90
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
All Organisms	root	All Organisms	24.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
cellular organisms	root	All Organisms → cellular organisms	24.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.51 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.90 %
Candidatus Muproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.80 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.90 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.90 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.90 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.90 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.70 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.90 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.90 %
Marinosulfonomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Marinosulfonomonas	0.90 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Collimonas pratensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas pratensis	0.90 %
unclassified Marinosulfonomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Marinosulfonomonas → unclassified Marinosulfonomonas	0.90 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.90 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.90 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.90 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Agrobacterium tumefaciens complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium tumefaciens complex	0.90 %
Marinosulfonomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Marinosulfonomonas → unclassified Marinosulfonomonas → Marinosulfonomonas sp.	0.90 %
Pseudomonas sp. GW456-11-11-14-LB4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW456-11-11-14-LB4	0.90 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.90 %
Collimonas pratensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas pratensis	0.90 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.68 %
Agrobacterium tumefaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium tumefaciens complex → Agrobacterium tumefaciens	0.90 %
Marinosulfonomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Marinosulfonomonas → unclassified Marinosulfonomonas → Marinosulfonomonas sp.	0.90 %
Pseudomonas sp. GW456-11-11-14-LB4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW456-11-11-14-LB4	0.90 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.90 %
Collimonas pratensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas pratensis	0.90 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10565174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300005332\|Ga0066388_100502646	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300005332\|Ga0066388_104036453	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005764\|Ga0066903_102439720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1012	Open in IMG/M
3300005764\|Ga0066903_102494855	Not Available	1001	Open in IMG/M
3300005764\|Ga0066903_102866790	Not Available	935	Open in IMG/M
3300005764\|Ga0066903_106435448	Not Available	612	Open in IMG/M
3300005764\|Ga0066903_107543194	Not Available	561	Open in IMG/M
3300009792\|Ga0126374_10084057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1751	Open in IMG/M
3300009792\|Ga0126374_10099333	Not Available	1647	Open in IMG/M
3300009792\|Ga0126374_10870604	Not Available	695	Open in IMG/M
3300010048\|Ga0126373_10701993	Not Available	1070	Open in IMG/M
3300010048\|Ga0126373_11157399	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300010048\|Ga0126373_11587534	Not Available	719	Open in IMG/M
3300010358\|Ga0126370_10697935	Not Available	891	Open in IMG/M
3300010358\|Ga0126370_10890986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GW456-11-11-14-LB4	802	Open in IMG/M
3300010358\|Ga0126370_11569801	Not Available	628	Open in IMG/M
3300010359\|Ga0126376_10034059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	3476	Open in IMG/M
3300010359\|Ga0126376_10222990	Not Available	1581	Open in IMG/M
3300010359\|Ga0126376_12397408	Not Available	574	Open in IMG/M
3300010360\|Ga0126372_10424616	Not Available	1222	Open in IMG/M
3300010360\|Ga0126372_11927677	Not Available	636	Open in IMG/M
3300010361\|Ga0126378_10871165	Not Available	1008	Open in IMG/M
3300010361\|Ga0126378_10917814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	982	Open in IMG/M
3300010361\|Ga0126378_11660753	Not Available	726	Open in IMG/M
3300010361\|Ga0126378_11763448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium tumefaciens complex → Agrobacterium tumefaciens	704	Open in IMG/M
3300010361\|Ga0126378_12467378	Not Available	594	Open in IMG/M
3300010361\|Ga0126378_13173798	Not Available	523	Open in IMG/M
3300010376\|Ga0126381_100013312	Not Available	9381	Open in IMG/M
3300010376\|Ga0126381_100129891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3276	Open in IMG/M
3300010376\|Ga0126381_100562669	Not Available	1617	Open in IMG/M
3300010376\|Ga0126381_101893928	Not Available	860	Open in IMG/M
3300010376\|Ga0126381_102190934	Not Available	795	Open in IMG/M
3300010376\|Ga0126381_102227028	Not Available	788	Open in IMG/M
3300010376\|Ga0126381_105018333	Not Available	507	Open in IMG/M
3300010937\|Ga0137776_1046381	Not Available	867	Open in IMG/M
3300010937\|Ga0137776_1807984	Not Available	1170	Open in IMG/M
3300012948\|Ga0126375_11817519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300012971\|Ga0126369_12698924	Not Available	581	Open in IMG/M
3300016270\|Ga0182036_10294501	Not Available	1232	Open in IMG/M
3300016270\|Ga0182036_10389368	Not Available	1083	Open in IMG/M
3300016270\|Ga0182036_11465090	Not Available	572	Open in IMG/M
3300016270\|Ga0182036_11856763	Not Available	510	Open in IMG/M
3300016319\|Ga0182033_11596227	Not Available	590	Open in IMG/M
3300016341\|Ga0182035_11843327	Not Available	548	Open in IMG/M
3300016371\|Ga0182034_10137622	Not Available	1815	Open in IMG/M
3300016371\|Ga0182034_10946474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	742	Open in IMG/M
3300016371\|Ga0182034_11200054	Not Available	660	Open in IMG/M
3300016404\|Ga0182037_10287536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1316	Open in IMG/M
3300016404\|Ga0182037_10296135	Not Available	1298	Open in IMG/M
3300016404\|Ga0182037_11167858	Not Available	675	Open in IMG/M
3300016404\|Ga0182037_11433966	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300016404\|Ga0182037_11541321	Not Available	590	Open in IMG/M
3300016404\|Ga0182037_11771099	Not Available	551	Open in IMG/M
3300016422\|Ga0182039_11725967	Not Available	573	Open in IMG/M
3300016422\|Ga0182039_12212048	Not Available	507	Open in IMG/M
3300016445\|Ga0182038_11899405	Not Available	538	Open in IMG/M
3300017823\|Ga0187818_10418516	Not Available	596	Open in IMG/M
3300017942\|Ga0187808_10461249	Not Available	586	Open in IMG/M
3300017943\|Ga0187819_10500526	Not Available	693	Open in IMG/M
3300017955\|Ga0187817_10106436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1768	Open in IMG/M
3300017955\|Ga0187817_10127086	Not Available	1614	Open in IMG/M
3300017955\|Ga0187817_10146462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → Collimonas pratensis	1500	Open in IMG/M
3300017970\|Ga0187783_10130053	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300017970\|Ga0187783_11119396	Not Available	567	Open in IMG/M
3300018058\|Ga0187766_10170841	Not Available	1360	Open in IMG/M
3300018058\|Ga0187766_10791658	Not Available	661	Open in IMG/M
3300018058\|Ga0187766_10925486	Not Available	616	Open in IMG/M
3300018058\|Ga0187766_11381455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300018058\|Ga0187766_11423661	Not Available	509	Open in IMG/M
3300018060\|Ga0187765_10479118	Not Available	783	Open in IMG/M
3300018060\|Ga0187765_11066288	Not Available	558	Open in IMG/M
3300021444\|Ga0213878_10401283	Not Available	597	Open in IMG/M
3300021560\|Ga0126371_10294457	Not Available	1748	Open in IMG/M
3300021560\|Ga0126371_10664952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1190	Open in IMG/M
3300021560\|Ga0126371_10948660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Marinosulfonomonas → unclassified Marinosulfonomonas → Marinosulfonomonas sp.	1003	Open in IMG/M
3300021560\|Ga0126371_12226021	Not Available	662	Open in IMG/M
3300021560\|Ga0126371_12881554	Not Available	583	Open in IMG/M
3300021560\|Ga0126371_13576979	Not Available	524	Open in IMG/M
3300031546\|Ga0318538_10361620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	784	Open in IMG/M
3300031573\|Ga0310915_11056325	Not Available	565	Open in IMG/M
3300031719\|Ga0306917_11189620	Not Available	592	Open in IMG/M
3300031736\|Ga0318501_10620946	Not Available	594	Open in IMG/M
3300031833\|Ga0310917_10096992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1892	Open in IMG/M
3300031879\|Ga0306919_10793233	Not Available	728	Open in IMG/M
3300031879\|Ga0306919_11291535	Not Available	553	Open in IMG/M
3300031890\|Ga0306925_11005788	Not Available	850	Open in IMG/M
3300031890\|Ga0306925_11557301	Not Available	645	Open in IMG/M
3300031896\|Ga0318551_10885445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300031910\|Ga0306923_10454350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1453	Open in IMG/M
3300031941\|Ga0310912_10927386	Not Available	670	Open in IMG/M
3300031942\|Ga0310916_10962254	Not Available	714	Open in IMG/M
3300031945\|Ga0310913_11205881	Not Available	527	Open in IMG/M
3300031947\|Ga0310909_10849466	Not Available	752	Open in IMG/M
3300031954\|Ga0306926_11923285	Not Available	668	Open in IMG/M
3300031962\|Ga0307479_11177167	Not Available	731	Open in IMG/M
3300032001\|Ga0306922_12133384	Not Available	542	Open in IMG/M
3300032001\|Ga0306922_12215287	Not Available	529	Open in IMG/M
3300032035\|Ga0310911_10049317	All Organisms → cellular organisms → Bacteria → Proteobacteria	2187	Open in IMG/M
3300032035\|Ga0310911_10261756	Not Available	991	Open in IMG/M
3300032035\|Ga0310911_10797630	Not Available	546	Open in IMG/M
3300032076\|Ga0306924_10394030	Not Available	1586	Open in IMG/M
3300032094\|Ga0318540_10214673	Not Available	928	Open in IMG/M
3300032261\|Ga0306920_101311744	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300032261\|Ga0306920_104401369	Not Available	505	Open in IMG/M
3300032783\|Ga0335079_11281911	Not Available	733	Open in IMG/M
3300033289\|Ga0310914_10983990	Not Available	744	Open in IMG/M
3300033289\|Ga0310914_11029760	Not Available	724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.79%
Aquatic	Environmental → Aquatic	7.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.79%
Freshwater	Environmental → Aquatic → Freshwater	5.41%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.91%
Loam	Environmental → Terrestrial → Soil → Loam	8.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.41%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.41%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	1.80%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	31.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.41%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.41%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	1.80%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_105651742	3300004633	Tropical Forest Soil	VLRITCDKCGRSGQYRVDRLIMRYGIDAKLFDWSDEIVADCPRKQAQNLNDQCGARCPDLSKVV*
Ga0066388_1005026461	3300005332	Tropical Forest Soil	MKSPMNGAEARRVITCDLCERSGQYRVDRLIMRYGIDAKLFDWCDEITAVCPRKMAKNMYDASGAKCPDLSKVV*
Ga0066388_1040364531	3300005332	Tropical Forest Soil	VLRITCDKCGRSGQYRVDRLIMRCGLDAKLFEWSDEITADCPRKQARNLNDQCGARCPDLSKVV*
Ga0066388_1067411991	3300005332	Tropical Forest Soil	YRVDHLIEQYGIDSKLFDWEPEADCPRKQAGNLNDQCGARCPDLSKVV*
Ga0066903_1024397201	3300005764	Tropical Forest Soil	LIERYGIDAKLFEWEPEANCPRKLARNENDPCGARFPYLSKPYPA*
Ga0066903_1024948551	3300005764	Tropical Forest Soil	LNVECDKCGRRGRYRLDRLIARYGIDAKLFDWEPEADCPRKMARNEHDARCPDLSNVV*
Ga0066903_1028667901	3300005764	Tropical Forest Soil	VTAPSSSATSSESSKCDKCGRFGRYHLERLIGQYGIDAKLFDWEPEADCQRKIARNDYDPCGARCPDPSKVV*
Ga0066903_1064354483	3300005764	Tropical Forest Soil	CGRSGQYRVDRLIMRYGIDAKLFDWSDEIVADCPRKQAQNLNDQCGARCPDLSKVV*
Ga0066903_1075431942	3300005764	Tropical Forest Soil	CDKWGRRGRYRLDRLIERYGIDTKLFDWEPEADCPRKVARNQYDPCGARCPDLSKVV*
Ga0126374_100840571	3300009792	Tropical Forest Soil	RVDRLILRYGIDAKLFDWEPEADCPRKVARNEYDPCGARFPYLSKVV*
Ga0126374_100993334	3300009792	Tropical Forest Soil	MSLRRPGTGARRPGPYRVDRIDAKLFEWTDEITTDCWHEQGKNLNVILGAGCPDLPKVVSPISL*
Ga0126374_108706041	3300009792	Tropical Forest Soil	HGSYSLGETAAKQKMVRLVCDKCGRRGWYRLDRLIEQYGLDAKLFDWEPEADCPRKMARNEHDPRGARCPDLSKVV*
Ga0126373_107019933	3300010048	Tropical Forest Soil	VLRITCDKCGRSGQYRVDRLIIRYGIDAKLFEWSDEITADCPRKQARNLNDQCGARCPDLSKVV*
Ga0126373_111573992	3300010048	Tropical Forest Soil	RITCDKCGRSGQYDVDRLIMRYGIDVKLFEWSDEITADCPRKQARNLNDQCGARCPDEPKVV*
Ga0126373_115875341	3300010048	Tropical Forest Soil	VLRITCDKCGRSGEYRVDRLILRYGIDAKLFDWEPEADCPRKVARNEYDPCGARFPYLSKVV*
Ga0126370_106979351	3300010358	Tropical Forest Soil	ITCDKCGRCGQDRVDRLILRYGIDAKLFDWSDEITADCPRKQAKNLDDQCGARCPDLPKVV*
Ga0126370_108909862	3300010358	Tropical Forest Soil	VLRVECGRRGSYPLDRLIERYGIDAKLFDWSAQITADCPRKHSGNLYDQCGARCPDLSKVV*
Ga0126370_115698011	3300010358	Tropical Forest Soil	DKCGRKGRYHLYRLIERYSIDAKLFDWSDEITADCPRKQAKNLNDTCGARCPDLSKVV*
Ga0126376_100340597	3300010359	Tropical Forest Soil	PLGWLFKQYGIDAKLFDWQPEANCPRKVARNDHDPCGARCPDLAKVV*
Ga0126376_102229901	3300010359	Tropical Forest Soil	TCDKCGRSGQYRVDRLIMRCGLDAKLFEWSDEITADCPRKQARNLNDQCGALCPDLSKVV
Ga0126376_123974082	3300010359	Tropical Forest Soil	MKSPMNGAEARRVITCDLCGRSGQYRVDRLIMRYGIDAKLFDWCDEITAVCPRKMAKNMYDASGAKCPDLSKVV*
Ga0126372_104246161	3300010360	Tropical Forest Soil	VVGKLTVLLRITCDKCGRSGQCRVDRLIMRYGIDAKLFDWSDEIMADCPRRHSGNLYDQCGARCPDLHKVV*
Ga0126372_119276772	3300010360	Tropical Forest Soil	MSLRRPGTGARRFGPYRVDRLILRYGIDAKLFEWTDEITTDCWRKQAKNLNVIRGAVCPDLP
Ga0126378_108711652	3300010361	Tropical Forest Soil	MNGAEARRVITCDLCGRSGQYRVDRLIMRYGIDAKLFDWCDESTAVCPRKMAKNKYDASGAKCPDLSKVV*
Ga0126378_109178143	3300010361	Tropical Forest Soil	RFGRYHVERLIERYGIDAKLFEWDPAADCPRKVARNEHDPCGARFPYLSKVV*
Ga0126378_116607531	3300010361	Tropical Forest Soil	CGRSGQYRVDRLIMSYGIDVKLFDWCDEITADCPRKQARNMNDQCGARCPDLPKVP*
Ga0126378_117634481	3300010361	Tropical Forest Soil	VLRVECDKCGRRGQYRVDYLIEQYGIDAKLFDWEPEADCPRKQANNLNDICGARCPDLHKVV*
Ga0126378_124673782	3300010361	Tropical Forest Soil	ECGKCGRRGRYDLHRLIERYGVDTKLFDWSDEITADCPRKQARNLNDQCGTRCPDLPKVL
Ga0126378_131737981	3300010361	Tropical Forest Soil	LRSGQYHVDRLILRYGIDAKLFDWSDEVTADCPRKVVRNEHDPCGGRFPYLSKVV*
Ga0126381_1000133128	3300010376	Tropical Forest Soil	VAAKVSTVSIHLIEQYGIDTKLFDGQAGNLNNQCGARCPDLSKVV*
Ga0126381_1001298916	3300010376	Tropical Forest Soil	VLRITCDKCGRSGQYRVDHLIMRYGIDAKLFDWTDEITADCPHKQARNLNDQCGVRCPDLSKVV*
Ga0126381_1005626694	3300010376	Tropical Forest Soil	GRRGWYRLDRLIEQYGLDAKLFDWEPEADCPRKMARNEHDPRGARCPDLSKVV*
Ga0126381_1018939282	3300010376	Tropical Forest Soil	LLACGCRGRYHLHRLIERYGIDVKLFDWSDEITAPDCPRKRARNCGARCPDLPKVL*
Ga0126381_1021909342	3300010376	Tropical Forest Soil	GELAVLRVTCDKCGRSGQYRVDRLIMRYGIDAKLSTWSDEITADCPRRHSKNLYDQCGARCPDLSKVV*
Ga0126381_1022270281	3300010376	Tropical Forest Soil	LRITCDKCGRCGQDRVDRLILRYGIDAKLFDWSDEITADCPRKRAMNLNDICGA
Ga0126381_1050183331	3300010376	Tropical Forest Soil	VLRITCDKCGRSGQYRVDHLIMRYGIDAKLFEWSDEITADCPRRHFGNLYDQRGARCPDLSKVV*
Ga0137776_10463811	3300010937	Sediment	VECDKCGRKGQYRLDRLIEQYGIDAKLFDWEPEADCPRKQAKNLNDTCGARCPDLSKVV*
Ga0137776_18079841	3300010937	Sediment	IERYGIDAKLFGWEPEADCPRKAARNEHDPCGASFPYLSKVV*
Ga0126375_118175191	3300012948	Tropical Forest Soil	GRSGQYRVDRLIMRYGIDAKLFDWSDEITADCPRKQARNLNDQCGARCPDLSKVV*
Ga0126369_126989241	3300012971	Tropical Forest Soil	LRSGQYHVDRLFLRYGIDAKLFDWEPEADCLRKVARNEYDPYGARCPDLSKVV*
Ga0182036_102945013	3300016270	Soil	RRGRYHLHRLIERYGIDAKLFDWSDEITADCPRKQANNLNDICGARCPDLSKVV
Ga0182036_103893681	3300016270	Soil	KCGRRGRYNLHRLIERYDIDAKLFEREPEADCPRKRSRNLYDQCGARCPDLSKVV
Ga0182036_114650901	3300016270	Soil	VPTLCLIMRYGLDAKLFEWEPEADCPRKVARNEHDPCGARCPDLSK
Ga0182036_118567631	3300016270	Soil	QCRLDRLIERYGIDAKLFDWEPEADCPRKVARNEHDPCGARCPDLSKVV
Ga0182033_115962271	3300016319	Soil	VVDELTVLQVEYEKCGRSGQYRLDQLIMCQGVDAKLFEWSDEITADCSREQTRNLNDQCGARRPDLSKV
Ga0182035_118433272	3300016341	Soil	MLTGARRSGPYRVDRLIARYGIDAKLFEWTDEITTDAGTQAKNLNDICSARCPGLPAVV
Ga0182034_101376221	3300016371	Soil	GRRGRYRLDRLIEPYGINAKLFEWSDEISPDCPRKLAKNLNDQCGARCPDLPKVM
Ga0182034_109464741	3300016371	Soil	NVECDKCGRRGRYHVHRLVERYGIDAKLFDWSEADCPRKQARSLNDQCRARCPDLPKVV
Ga0182034_112000541	3300016371	Soil	VVDELTVLQVEYEKCGRSGQYRLDQLIMCQGVDAKLFEWSDEITADCSREQTRNLNDQCGARRPDPSKVV
Ga0182037_102875361	3300016404	Soil	GQYRVDHLIEQYGIDAKLFDWEPEADCPRKQAKNLNDICGAQCPDLSRVV
Ga0182037_102961353	3300016404	Soil	VLRVECDKCGRRGNYPVDRLIERYGIDAKLFDFEPEADCPRKGARNDYDPCGARCPDLAKVV
Ga0182037_111678581	3300016404	Soil	ITCDKCGRSGQYDVDRLIMRYGIDVKLFEWSDEVTADCPRKQARNFNGQCPDLSKVV
Ga0182037_114339662	3300016404	Soil	ECDKCGRKGQYRVDHLIEQYGLDAKLFDWEPEADCPRKQAKNLNDICGARCPDLSKVV
Ga0182037_115413212	3300016404	Soil	GQYRVDHLIEQYGIDAKLFDWEPEADCPRKQAKNLNDQCGARCPDLSKVV
Ga0182037_117710991	3300016404	Soil	GRSGQYHVDRLIMRYGIDAKLFDWSDEITADCPRRHSKNLYDQCGARCPDLHKVV
Ga0182039_117259671	3300016422	Soil	CGRSGQYRFDRLIMRYGVNAKLFEWSDEIMAGCPSTHSGNLYDQCGARCRTYQRYFSGRF
Ga0182039_122120481	3300016422	Soil	VLRVECDKCGRRRNYPVDRLIERYGIDAKLFDFEPEADCPRKGARNDYDPCGARCP
Ga0182038_118994053	3300016445	Soil	VGRRGRYRLDRLIEPYGINAKLFEWSDEITADSPRKLAKNLNDQCG
Ga0187818_104185161	3300017823	Freshwater Sediment	LYHLDRLIERYGIDAKLFDWMDEITADCPRKQAASLNDICGARCPDLPKVV
Ga0187808_104612492	3300017942	Freshwater Sediment	GNYRLARLIAKYGLDAKLFVWTDELTADCPRKQARSQIDQCGAICPDLPRVV
Ga0187819_105005261	3300017943	Freshwater Sediment	GRRGLYHLDRLIERYGIDAKLFDWSDEITADCPRKQAMNLNDVCGVRCPDLPRVV
Ga0187817_101064362	3300017955	Freshwater Sediment	LNVECDKCGRRGLYHLDRLIERYGIDAKLFDWMDEITADCPRKRAANVNDVCGARCPDLPKVV
Ga0187817_101270862	3300017955	Freshwater Sediment	GLYHLDRLIERYGIDAKLFDWMDEITADCPRKQAMNLNDVCGVRCPDLPRVV
Ga0187817_101464621	3300017955	Freshwater Sediment	NVECDKCGRRGLYHLDRLIERYGIDAKLFDWSDEITADCPRKQAMNLNDVCGVRCPDLPRVV
Ga0187783_101300533	3300017970	Tropical Peatland	CGRRGRYRLDRLIERDGIDAKPFDWSDEITADCPSKQAKNLNNQCGARCPDLHKVA
Ga0187783_111193962	3300017970	Tropical Peatland	YHLERLIEQYGIDAKLFDWEPEADCPRKIARNDYDPCGIRCPDLAKVV
Ga0187766_101708411	3300018058	Tropical Peatland	MDDNRLDRLIERYGTDAKLFDWSDEITADCPRKQAMNLNDICGARCPDLSKVV
Ga0187766_102697861	3300018058	Tropical Peatland	VCRRRDVITVQCDTCGRFGRYHVDRLIERYGIDAKLFEWEPEANCPRKVARNEHDPCGARFPYLSKVV
Ga0187766_107916582	3300018058	Tropical Peatland	YHVDRLIERYGIDAKLFDWEPEADCPRKVASNEHDPCGARCPELSKVV
Ga0187766_109254861	3300018058	Tropical Peatland	RSGQYRVDRLIMRYGIDAKLFEWSDEITADCPRKQARNLNDQCGARCPDLSKVV
Ga0187766_113814552	3300018058	Tropical Peatland	NVGCDKCGRFGGYHLERPVERYGIEAKPFEWSDEITADCPPKQAKNLNDICGARCPEQRPEPK
Ga0187766_114236611	3300018058	Tropical Peatland	YHVDRLIERYGIDAKLFGWEPEADCPRKAARNEHDPCGASFPYLSKVV
Ga0187765_104791181	3300018060	Tropical Peatland	AVYHVARLIERYGIDAKLFEWEPQADCPRKVARNERDPCGARFPYLSKVV
Ga0187765_110662882	3300018060	Tropical Peatland	VVDELTVLQVEYEKCGRSGQYRLDQLIMCQGVDAKLFEWSDEITADCSREQTRNLNDQCGARCPGLPKVV
Ga0213878_104012831	3300021444	Bulk Soil	GSGGALDVLTVECDKCGRFGRYHVDRVIERYGIDVKLFEWEPEVDCRRKIARNDYDPVRQRE
Ga0126371_102944571	3300021560	Tropical Forest Soil	MKSPMNGAEARRVITCDLCGRSGQYRVDRLIMRYGIDAKLFDWCDEITAVCPRKMAKNMYDASGAKCPDLSKVV
Ga0126371_106649522	3300021560	Tropical Forest Soil	VLRITCDKCGRSGQYRVDRLIMRYGIDAKLFAWSDEIKADCPRKQAPNLNDQRGARCPDLSKVV
Ga0126371_109486601	3300021560	Tropical Forest Soil	SGQYRVDRLIMRYGIDAKLFEWSDQITADCPRKQARNLNDPCGARCLDLSKVV
Ga0126371_122260212	3300021560	Tropical Forest Soil	VLRITCDKCGRSGQYRVDRLIIRYGIDAKLFEWSDEITADCPRKQARNLNDQCGARCPDLSKVV
Ga0126371_128815541	3300021560	Tropical Forest Soil	LRSGQYHVDRLILRYGIDAKLFDWSDEVTADCPRKVVRNEHDPCGGRFPYLSKVV
Ga0126371_135769791	3300021560	Tropical Forest Soil	NFDQKNWLPDKCGRRGRYRLDRLIEQYGLDAKLFEWEPEADCPRKVARNEHDSCGARCPDLSKVV
Ga0318538_103616203	3300031546	Soil	RYRLDRLIEQYGIDAKLFDCEPEADCPRKLVKNFYNPCGARSYFPHVVG
Ga0310915_110563251	3300031573	Soil	VVDELTVLQVEYEKCGRSGQYRLDQLIMCQGVDAKLFEWSDEITADCSREQTRNLNDQCGARRPDLSKVV
Ga0306917_111896202	3300031719	Soil	MLTGARRSGPYRVDRLIARYGIDAKLFDWSDEITADYPRKQAKKLNDVCGARRRDLPKAV
Ga0318501_106209462	3300031736	Soil	RSGQYRVDRLTMRYGIDAKLFDWSDEITADCPRKQARNLNDQCGAQCPDLSKVV
Ga0310917_100969921	3300031833	Soil	MLTGARRSGPYRVDRLIARYGIDAKLFDWSDEITADYPRKQAKKLNDVCGARRRDLPKAA
Ga0310917_109664172	3300031833	Soil	RLDRLIEQYGIDAKLFDWEPEADCPRKQAKNLNDICGARCPDLSRVV
Ga0306919_107932331	3300031879	Soil	YGIDAKLFDWEPEADCPRKVARNEHDPCGARFPYLSKVV
Ga0306919_112915351	3300031879	Soil	STRAECTKRGHRRRYRLDRLIERYGIDAKLFDRTDEITADCPRKQAMNLSDICGARCPDLPKVV
Ga0306925_110057881	3300031890	Soil	VVDELTVLQVEYEKCGRSGQYRLDQLIMCQGVDAKLFEWSDEITADCSREQTRNLNDQCG
Ga0306925_115573012	3300031890	Soil	GRFGRYHVDRLIERYGIDAKLFDWEPEADCPRKVASNEHDPCGARCPELSKVV
Ga0318551_108854451	3300031896	Soil	VLRVECDKCGREGQYRVDHLIEQYGIDAKLFDWEPEADCPRKQAKNLNDICGAQCPDLSRVV
Ga0306923_104543503	3300031910	Soil	VLNVECAKCGRRGRYRLDRLIERYGIDAKLFDWTDEITADRPRKQAKNICGARCPDLPKV
Ga0310912_109273862	3300031941	Soil	VLNIECDKCGRKGQYRVDHLIEQYGIDAKLFDWEPEADCPRKQAKNLNDICGARCPDLSKVV
Ga0310916_109622543	3300031942	Soil	GRYMLARLVARYGIDAKLFDWSDEITADCPRKQAKNFNDQCSARCPDLPKVV
Ga0310913_112058812	3300031945	Soil	RSGQYRLDRLIMRYGIDAKLFEWPDEITADCPRKQQAKNLNDACGARCPDLPKVV
Ga0310909_108494661	3300031947	Soil	FGRYHVDRLIERYGIDAKLFDFEPKADCPRKIARNDYDPCGARCPNLAKVV
Ga0306926_119232851	3300031954	Soil	MAGPLGPFGRYHLDRLIERYGIAELFEWSDEITTDCPRKQAKNLNDICGARCPDLPKVV
Ga0307479_111771671	3300031962	Hardwood Forest Soil	GRRGRYHLHRLIERYGIDAKLFEWSDELTADCAQAGQEPQRICGARCPDLPKVV
Ga0306922_121333841	3300032001	Soil	RITCDRCSRSGQYRVDRLIMRYGIDAKLFEWSDEITADCPRKQANNLNDQCGARCPDLSKVV
Ga0306922_122152871	3300032001	Soil	TVLRITCDKCGRSGQYRVDRLIMRYGIDAKLFAWSDEIKADCPRKQAPNLNDQRGARCPDLSKVV
Ga0310911_100493174	3300032035	Soil	LRITCDKCGRSGQYRVDRLILRYGIDAKLFDWSDEITADCPRKQANNLNDTCGARCPDLPKVV
Ga0310911_102617562	3300032035	Soil	RSGQYRLDRLILRCGIDAKLFDWLDEITADCPRKQARNLNDQCGARCPDLSKVV
Ga0310911_107976301	3300032035	Soil	VWPYHVDRLIERYGIDAKLFEWEPEADCPRKVARNEHDPCGARFPYLSKVV
Ga0306924_103940303	3300032076	Soil	MAGPLGPFGRYHLDRLIERYGITELFEWSDEITTDCPRKQAKNLNDICGARCPDLPKVV
Ga0318540_102146734	3300032094	Soil	RVDHLIEQYGIDAKLFDWEPEADCPRKQAKNLNDICGARCPDLSKVVSRPSPAGLWRARG
Ga0306920_1013117443	3300032261	Soil	HRWQTGRAAHSLVDKCVRSGHYRVDRLTIRYGIDAKLFDWSDEITADCPRKHSGNLYDQCGARCPDLSKVV
Ga0306920_1044013691	3300032261	Soil	TVLRVECDKCGRKGQYRVDHLIEQYGIDAKLFDSEPEADCPRKQAKNLNDICGARCPDLSKVV
Ga0335079_112819111	3300032783	Soil	LRVECDKSADAGAIEIDRLIERYSIDAKLSDFKPEADCPRKIARNPYDACGAWCPDLSKV
Ga0310914_109839902	3300033289	Soil	MLTGARRSGLYRVDRLILRYGIDAKLFEWTDEITTDCWRKQAKNLNDICSARCPDLPKVV
Ga0310914_110297601	3300033289	Soil	KCGRKGQYRVDHLIEQYGIDAKLFDWEPEADCPRKQAKNLNDICGAQCPDLSRVV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084990

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences