Metagenome / Metatranscriptome Family F084989

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084989
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	78 residues
Representative Sequence	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH
Number of Associated Samples	85
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.78 %
% of genes near scaffold ends (potentially truncated)	27.93 %
% of genes from short scaffolds (< 2000 bps)	88.29 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.162 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.225 % of family members)
Environment Ontology (ENVO)	Unclassified (37.838 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.351 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.78% β-sheet: 0.00% Coil/Unstructured: 22.22%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01425	Amidase	8.11
PF08450	SGL	3.60
PF13751	DDE_Tnp_1_6	2.70
PF08592	Anthrone_oxy	1.80
PF02868	Peptidase_M4_C	0.90
PF14490	HHH_4	0.90
PF03070	TENA_THI-4	0.90
PF00208	ELFV_dehydrog	0.90
PF00211	Guanylate_cyc	0.90
PF13538	UvrD_C_2	0.90
PF14099	Polysacc_lyase	0.90
PF01979	Amidohydro_1	0.90
PF13463	HTH_27	0.90
PF04392	ABC_sub_bind	0.90
PF00873	ACR_tran	0.90
PF02656	DUF202	0.90
PF00106	adh_short	0.90
PF07386	DUF1499	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	8.11
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	3.60
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	3.60
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.90
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.90
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.90
COG2902	NAD-specific glutamate dehydrogenase	Amino acid transport and metabolism [E]	0.90
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.90
COG3227	Zn-dependent metalloprotease (Neutral protease B)	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG4446	Uncharacterized conserved protein, DUF1499 family	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
All Organisms	root	All Organisms	37.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
cellular organisms	root	All Organisms → cellular organisms	37.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.22 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.70 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.70 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.80 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.70 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.70 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.90 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.90 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.90 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.70 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.90 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	0.90 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.90 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.70 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.90 %
Cupriavidus sp. ISTL7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. ISTL7	0.90 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.90 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004268\|Ga0066398_10118279	Not Available	634	Open in IMG/M
3300004633\|Ga0066395_10089652	Not Available	1459	Open in IMG/M
3300005332\|Ga0066388_102793766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	892	Open in IMG/M
3300005363\|Ga0008090_15822425	Not Available	960	Open in IMG/M
3300005445\|Ga0070708_101817001	Not Available	565	Open in IMG/M
3300005454\|Ga0066687_10066600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1729	Open in IMG/M
3300005467\|Ga0070706_101978768	Not Available	528	Open in IMG/M
3300005471\|Ga0070698_101499345	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005536\|Ga0070697_101543856	Not Available	593	Open in IMG/M
3300005764\|Ga0066903_102940070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	924	Open in IMG/M
3300005764\|Ga0066903_105674552	Not Available	656	Open in IMG/M
3300009792\|Ga0126374_10248363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1160	Open in IMG/M
3300010046\|Ga0126384_10027107	Not Available	3763	Open in IMG/M
3300010047\|Ga0126382_11004742	Not Available	731	Open in IMG/M
3300010048\|Ga0126373_11133295	Not Available	848	Open in IMG/M
3300010359\|Ga0126376_11692564	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300010361\|Ga0126378_10030450	All Organisms → cellular organisms → Bacteria → Proteobacteria	4822	Open in IMG/M
3300010361\|Ga0126378_10984999	Not Available	947	Open in IMG/M
3300010361\|Ga0126378_12053403	Not Available	652	Open in IMG/M
3300010361\|Ga0126378_12549590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300010362\|Ga0126377_11283182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300010366\|Ga0126379_12126148	Not Available	663	Open in IMG/M
3300010366\|Ga0126379_13633983	Not Available	517	Open in IMG/M
3300010376\|Ga0126381_101110658	Not Available	1142	Open in IMG/M
3300010398\|Ga0126383_10323873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1550	Open in IMG/M
3300011120\|Ga0150983_12536316	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300011120\|Ga0150983_14048415	Not Available	567	Open in IMG/M
3300012203\|Ga0137399_10684628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300012205\|Ga0137362_10891654	Not Available	760	Open in IMG/M
3300012208\|Ga0137376_10481498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1077	Open in IMG/M
3300012362\|Ga0137361_10719068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300012685\|Ga0137397_10416235	Not Available	1001	Open in IMG/M
3300012918\|Ga0137396_10663533	Not Available	770	Open in IMG/M
3300012922\|Ga0137394_10786731	Not Available	798	Open in IMG/M
3300012923\|Ga0137359_10331228	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300012923\|Ga0137359_11572819	Not Available	545	Open in IMG/M
3300012925\|Ga0137419_11098528	Not Available	662	Open in IMG/M
3300012944\|Ga0137410_11451317	Not Available	597	Open in IMG/M
3300016294\|Ga0182041_10779553	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300016319\|Ga0182033_10593439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	961	Open in IMG/M
3300016371\|Ga0182034_11762780	Not Available	545	Open in IMG/M
3300016404\|Ga0182037_10031196	All Organisms → cellular organisms → Bacteria	3394	Open in IMG/M
3300016422\|Ga0182039_10570524	Not Available	986	Open in IMG/M
3300016422\|Ga0182039_11040485	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300016445\|Ga0182038_11343809	Not Available	639	Open in IMG/M
3300017970\|Ga0187783_10194573	Not Available	1490	Open in IMG/M
3300020579\|Ga0210407_10051479	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300020579\|Ga0210407_10668733	Not Available	806	Open in IMG/M
3300020579\|Ga0210407_10998820	Not Available	638	Open in IMG/M
3300020580\|Ga0210403_10396376	Not Available	1127	Open in IMG/M
3300020580\|Ga0210403_11186078	Not Available	589	Open in IMG/M
3300021405\|Ga0210387_11211696	Not Available	655	Open in IMG/M
3300021420\|Ga0210394_10563337	Not Available	1002	Open in IMG/M
3300021432\|Ga0210384_11629832	Not Available	551	Open in IMG/M
3300021559\|Ga0210409_10826968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300021560\|Ga0126371_10191712	Not Available	2135	Open in IMG/M
3300021560\|Ga0126371_10260704	Not Available	1850	Open in IMG/M
3300021560\|Ga0126371_10354861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1602	Open in IMG/M
3300022525\|Ga0242656_1106952	Not Available	554	Open in IMG/M
3300025939\|Ga0207665_10285820	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300030967\|Ga0075399_11281216	Not Available	534	Open in IMG/M
3300030969\|Ga0075394_11996655	Not Available	595	Open in IMG/M
3300031057\|Ga0170834_102478746	Not Available	928	Open in IMG/M
3300031122\|Ga0170822_10559950	Not Available	643	Open in IMG/M
3300031128\|Ga0170823_14188982	Not Available	1147	Open in IMG/M
3300031231\|Ga0170824_115384132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1255	Open in IMG/M
3300031231\|Ga0170824_116029689	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300031231\|Ga0170824_119387836	Not Available	706	Open in IMG/M
3300031231\|Ga0170824_121496892	Not Available	861	Open in IMG/M
3300031446\|Ga0170820_15938734	Not Available	1759	Open in IMG/M
3300031446\|Ga0170820_17855860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2202	Open in IMG/M
3300031469\|Ga0170819_16774393	Not Available	570	Open in IMG/M
3300031543\|Ga0318516_10062543	Not Available	2050	Open in IMG/M
3300031545\|Ga0318541_10131132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1366	Open in IMG/M
3300031572\|Ga0318515_10260403	Not Available	930	Open in IMG/M
3300031573\|Ga0310915_10292690	Not Available	1150	Open in IMG/M
3300031573\|Ga0310915_10735641	Not Available	695	Open in IMG/M
3300031679\|Ga0318561_10747721	Not Available	537	Open in IMG/M
3300031708\|Ga0310686_100868201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2577	Open in IMG/M
3300031720\|Ga0307469_12059114	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031720\|Ga0307469_12513729	Not Available	503	Open in IMG/M
3300031754\|Ga0307475_10192511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1629	Open in IMG/M
3300031771\|Ga0318546_10075962	All Organisms → cellular organisms → Bacteria → Proteobacteria	2157	Open in IMG/M
3300031795\|Ga0318557_10216596	Not Available	875	Open in IMG/M
3300031820\|Ga0307473_10712745	Not Available	706	Open in IMG/M
3300031845\|Ga0318511_10218470	Not Available	850	Open in IMG/M
3300031879\|Ga0306919_10162749	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300031879\|Ga0306919_10926036	Not Available	668	Open in IMG/M
3300031879\|Ga0306919_11303026	Not Available	550	Open in IMG/M
3300031890\|Ga0306925_10215241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2072	Open in IMG/M
3300031896\|Ga0318551_10439856	Not Available	744	Open in IMG/M
3300031910\|Ga0306923_10176653	Not Available	2438	Open in IMG/M
3300031910\|Ga0306923_11022624	Not Available	896	Open in IMG/M
3300031910\|Ga0306923_11285942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	777	Open in IMG/M
3300031912\|Ga0306921_11123205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300031954\|Ga0306926_10849781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1097	Open in IMG/M
3300031962\|Ga0307479_10833708	Not Available	897	Open in IMG/M
3300031981\|Ga0318531_10151976	Not Available	1037	Open in IMG/M
3300032001\|Ga0306922_11360243	Not Available	715	Open in IMG/M
3300032010\|Ga0318569_10031991	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300032035\|Ga0310911_10059154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2017	Open in IMG/M
3300032042\|Ga0318545_10166172	Not Available	786	Open in IMG/M
3300032043\|Ga0318556_10268903	Not Available	890	Open in IMG/M
3300032059\|Ga0318533_10708616	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300032174\|Ga0307470_10341354	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300032174\|Ga0307470_11118840	Not Available	635	Open in IMG/M
3300032180\|Ga0307471_101046857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. ISTL7	982	Open in IMG/M
3300032180\|Ga0307471_102872775	Not Available	611	Open in IMG/M
3300032205\|Ga0307472_101002819	Not Available	782	Open in IMG/M
3300032261\|Ga0306920_101390370	Not Available	1006	Open in IMG/M
3300032261\|Ga0306920_103305285	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.29%
Loam	Environmental → Terrestrial → Soil → Loam	10.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	9.01%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066398_101182791	3300004268	Tropical Forest Soil	MPKDPLAREQEMVVEVACHALTRTIAQYSPVGTDTLPIAAVAISRMFANLISSLSSAPEIVDVVNRQIEQCGYRLVSTRRH*
Ga0066395_100896522	3300004633	Tropical Forest Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNQQIEQCGYRLIRTRRH*
Ga0066388_1027937661	3300005332	Tropical Forest Soil	MPKDPLAREQEMVVQVACHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIQQCGYRLISARRH*
Ga0008090_158224251	3300005363	Tropical Rainforest Soil	MPKDPLTREQEMVVQVARQALTRTIEQYSPVGTDTLPIATVAISRMFADLINNLSGAADIVDIINRQIEQTGYRLIETRRH*
Ga0070708_1018170011	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPKDPLAREQEMVVQIACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH*
Ga0066687_100666003	3300005454	Soil	MQKDPLAREQEMVVQIACHALTRTIEQYSPVGTDTLPIAAVAISRMLADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH*
Ga0070706_1019787681	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSGAPEIVDLVNRQIEQCGYRLTRRH*
Ga0070698_1014993451	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHPLAREQEMVIQVACHALTRTIEQYSPVGADTLPIAAVAISRMFADLINNLSGAPEIVDIVNRQIEQCGYRLTRRH*
Ga0070697_1015438561	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPKDPLAREQEMVVQIACNALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH*
Ga0066903_1029400703	3300005764	Tropical Forest Soil	MPKDPLAREQEMVVQVACHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISARRH*
Ga0066903_1056745521	3300005764	Tropical Forest Soil	MPKDPFAREQEMVVQVACHALKRTIEQYSPVGTDTLPIAAVAISRMFVDLINSLSSASEIVDVVNRQIEQCGYR
Ga0126374_102483632	3300009792	Tropical Forest Soil	MTHTIRGDRMPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNQQIEQCGYRLIRTRRH*
Ga0126384_100271076	3300010046	Tropical Forest Soil	MPKDPLAREQEMVVQVACHALTRTIAQYSPVGTDTLPIAAVAISRMFANLISSLSSAPEIVDVVNRQIEQCGYRLVSTRRH*
Ga0126382_110047421	3300010047	Tropical Forest Soil	MTHTIRGDRMPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNQQIEQCGYRL
Ga0126373_111332952	3300010048	Tropical Forest Soil	MPKDPLAREQEMVIQVARHALTRTIEQYSPAGTDTLPIVAVAISRIFADLINSLSSATDTVDVINRQIEQSGYRLIETRRR*
Ga0126376_116925641	3300010359	Tropical Forest Soil	ASYKKAHAKRDEQRMPKDTLAREQEIVVQAARCALTRTIEQYSPIGTDTLPITMVAISRMFADLINNLSSAPEIVDIVNRQIQQCGYRLISARRH*
Ga0126378_100304506	3300010361	Tropical Forest Soil	MPKDPLAREQEMVVEVACHALTRTIAQYSPVGTDTLPIAAVAISRMFANLISSLSIAPEIVDVVNRQIEQCGYRLVSTRRH*
Ga0126378_109849992	3300010361	Tropical Forest Soil	MPKDTLAREQEIVVQAARCDLTRTIEQYSPIGTDTLPITMVAISRMFADLINNVSSAADIVDVINRHIEQTGYRLIETQRH*
Ga0126378_120534031	3300010361	Tropical Forest Soil	MPKNPLAREREMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFADLINSLSSAPDVIEIVNRQIEKCGYRLIQTRRH*
Ga0126378_125495902	3300010361	Tropical Forest Soil	MPKDPLAREQEMVVQVACHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVN
Ga0126377_112831823	3300010362	Tropical Forest Soil	MPKDPLAREQEMVVQVACHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINSLSSAPEILDVVNRQIERCGY
Ga0126379_121261482	3300010366	Tropical Forest Soil	RLNRSQDPLARGQEMVVQVACHALTRTIQQYSPVGTDTQPIAAVAISRMFADLINNLSSAPEIVDIVNRQIQQCGYRLINARRH*
Ga0126379_136339832	3300010366	Tropical Forest Soil	MPKDPLAREQDMVVQIACRALTRTIEQYSPVGTDILPIAALAISRMFADLIYSLSSGSEIVDVVNRQIEQCGYRLISTRRH*
Ga0126381_1011106583	3300010376	Tropical Forest Soil	MPKDPLAREQEIVVQVARHALTRAIEQYSPVGTDTLPIATVAISRMFADLINNLSSAADVVDIINRQIEQTGYRLIETRRY*
Ga0126383_103238732	3300010398	Tropical Forest Soil	MPKDPLAREQELVVQVACHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISARRH*
Ga0150983_125363162	3300011120	Forest Soil	MVVQIACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH*
Ga0150983_140484152	3300011120	Forest Soil	RMPKHPLAREQEMVIQVACHALTRTIEQYSPVGADTLPIAAVAISRMFADLINNLSGAPEIVDIVNRQIEQCGYRLTRRH*
Ga0137399_106846281	3300012203	Vadose Zone Soil	MPKHPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYWLTRRH*
Ga0137362_108916542	3300012205	Vadose Zone Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH*
Ga0137376_104814981	3300012208	Vadose Zone Soil	MPKDTFAREQEMVIQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINGLSSASEIVDVVNRQIEQCGYRLVSTRRH*
Ga0137361_107190681	3300012362	Vadose Zone Soil	MPKDPLAREQEMVVQIACHAVTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH*
Ga0137397_104162351	3300012685	Vadose Zone Soil	MPKDTFAREQEMVIQVACHALTRTIEPYSPVGTDTLPIAAVAISRMFADLINGLSSASEIVDVVNRQIEQCGYRLVSTRRH*
Ga0137396_106635332	3300012918	Vadose Zone Soil	EMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNQQIEQCGYRLIRTRRH*
Ga0137394_107867312	3300012922	Vadose Zone Soil	MPKDPLAREQEMVVQIACHALMRTIEQYSPVGTDTLPIAAVAIGRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH*
Ga0137359_103312282	3300012923	Vadose Zone Soil	MPKDPLAREQEMVVQIACHALMRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSGAPEIVDIVNRHIEQCGYRLTRRH*
Ga0137359_115728191	3300012923	Vadose Zone Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNRQIEQCGYRLIRTRRH*
Ga0137419_110985281	3300012925	Vadose Zone Soil	MPKHPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH*
Ga0137410_114513171	3300012944	Vadose Zone Soil	IQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINGLSSASEIVDVVNRQIEQCGYRLVSTRRR*
Ga0182041_107795532	3300016294	Soil	MPKDPLAREQEMVVQVACHALTRTIQEYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIQQCGYRLISARRH
Ga0182033_105934392	3300016319	Soil	MVVQVASHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISARRH
Ga0182034_117627801	3300016371	Soil	MPKDTLAREQEIVVQAARCALTRTIEQYSPIGTDTLPITTIAISRMFADLINNVSSAADIVDVINRHIEQTAYRLIETRRH
Ga0182037_100311962	3300016404	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDTVDIVNRQIEQCGYRLVRTRRH
Ga0182039_105705242	3300016422	Soil	MPKDTLAREQEIVVQAARCALTRTIEQYSPIGTDTLPITTVAISRMFADLINIVSSAADIVDVINRHIEQTGYRLIETRRH
Ga0182039_110404851	3300016422	Soil	MPKDPLAREQEMVVQVACHALTRTIQQYSPVGTDTLPIVAVSQMFADLISNLSSAPEIVDIVNRQIEQCGFRLISARR
Ga0182038_113438091	3300016445	Soil	MPTGLLAREQEIVIQAARHALTRTIEQYSPAGTDTLPIATVAIGRMFADFINSLSSTADIVNVINRQIEESGYRLVETRRH
Ga0187783_101945733	3300017970	Tropical Peatland	MPKDTLAREQEIVVQAARCALTRTIEQYSPIGTDTLPITTVAISRMFADLINHVSSAADIVDVINRHIEQTGYRLIETRRH
Ga0210407_100514793	3300020579	Soil	MPKDPLAREQEMVVQIACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH
Ga0210407_106687331	3300020579	Soil	MPKHPLAREQEMVIQVACHALTRTIEQYSPVGADTLPIAAVAISRMFADLINNLSGAPEIVDIVNRQIEQCGYRLTRRH
Ga0210407_109988202	3300020579	Soil	MPKDPLAREREMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNRQIEQCGYRLIRTRRH
Ga0210403_103963762	3300020580	Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNRQIEQCGYRLIRTRRH
Ga0210403_111860781	3300020580	Soil	TFAREQEMVIQVACHALTRTIEQYSPVGTDTMPIAAVAISRMFADLINGLSSASEIVDVVNRQIEQCGYRLVSTRRH
Ga0210387_112116961	3300021405	Soil	MPKDTFAREQEMVVRVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINGLSSASEIVDVVNRQIEQCGYRLVSTRRH
Ga0210394_105633373	3300021420	Soil	MVVQIACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH
Ga0210384_116298321	3300021432	Soil	MPKDTFAREQEMVIQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINGLSSASEIVDVVNRQIEQCGY
Ga0210409_108269681	3300021559	Soil	MPKDTFAREQEMVIQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH
Ga0126371_101917123	3300021560	Tropical Forest Soil	MPKDPLAREQEMVVEVACHALTRTIAQYSPVGTDTLPIAAVAISRMFANLISSLSSAPEIVDVVNRQIEQCGYRLVSTRRH
Ga0126371_102607045	3300021560	Tropical Forest Soil	MPKGLLAREQEIVIQAARHALTRTIEQYSPVGTDTLPIATVAISRMFADLINGLSIAADIVNVINRQIEESGYRLVETRRH
Ga0126371_103548612	3300021560	Tropical Forest Soil	MPKDPLAREQEMVVQVACHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISARRH
Ga0242656_11069521	3300022525	Soil	MPKDPLAREQEMVVQIACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLTRRH
Ga0207665_102858202	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINGLSSASEIVDVVNRQIEQCGYRLVSTRRH
Ga0075399_112812161	3300030967	Soil	MLKDVLAREQDIVVRTARHALTRTIEQYSPAGTDTTPIAAAAISSMFADLVARLSMAPDLVGIINRQIE
Ga0075394_119966552	3300030969	Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNQQIEQCGYRLIRTRRD
Ga0170834_1024787462	3300031057	Forest Soil	MLKDVLAREQDIVVRTARHALTRTIEQYSPAGTDTTPIAAAAISSMFADLVARLSMAPDLVGIINRQIERSGYRLVKIRRD
Ga0170822_105599501	3300031122	Forest Soil	MLKDVLAREQDIVVRTARHALTRTIEQYSPAGTDTTPIAAAAISSMFADLVARPSMAPDLVGIINRQIERSGYRLVKIRRD
Ga0170823_141889822	3300031128	Forest Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNRQIEQCGYRLIRTRRY
Ga0170824_1153841322	3300031231	Forest Soil	MPKDPLAREQEMVVQVACHALTRTIQQYSPVGTDTLPIAAVAVSRMFADLISNLSSAPEIVDIVNRQIEQCGYRLISARRH
Ga0170824_1160296891	3300031231	Forest Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNRQIEQCGYRLVRTRRY
Ga0170824_1193878362	3300031231	Forest Soil	MPKDPLAREQEMVVQVACHALRRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQRGYRLISTRRH
Ga0170824_1214968922	3300031231	Forest Soil	MLKDVLAREQDIVVRTARHALTRTIEQYSPAGTDTTPIAAAAISSMFADLVARLSMAPDLVGIINRQIEHSGYRLVKIRRD
Ga0170820_159387341	3300031446	Forest Soil	MPKDPLAREQEMVVQIACNALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH
Ga0170820_178558603	3300031446	Forest Soil	MPKDILAREQDIVVRTARHALTRTIEQYSPAGTDTAPIAAVAISGMFADLVARLSMAPDLEGIINRQIEIRRN
Ga0170819_167743932	3300031469	Forest Soil	MRKDPLAREQEMVVQIACNALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEMVDIVNRQIEQCGYRLIS
Ga0318516_100625432	3300031543	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQIEQCGYRLVRTRRH
Ga0318541_101311322	3300031545	Soil	MPKNPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFADLINSLSSAPDVIEIVNRQIEKCGCRLIQTRRH
Ga0318515_102604032	3300031572	Soil	MPKNPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFADLINSLSSAPDVIEIVNRQIEKCGYRLIQTRRH
Ga0310915_102926902	3300031573	Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNQQIEQCGYRLIRIRRH
Ga0310915_107356412	3300031573	Soil	MPKNPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFADLINSLSSAPDVIEIVNRQIEKCGCRLIQ
Ga0318561_107477211	3300031679	Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNQQIE
Ga0310686_1008682012	3300031708	Soil	MPKDTLAREQDIVVQAARHALTRTIEQYSPIGTDTLPIATVAISRMFADLINNVSSAADIVDVINRQIEQTGYRLIGTRRH
Ga0307469_120591141	3300031720	Hardwood Forest Soil	EMVIQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH
Ga0307469_125137291	3300031720	Hardwood Forest Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNRQI
Ga0307475_101925112	3300031754	Hardwood Forest Soil	MPKDPLAREQEMVVQVACHALTRAIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIADIVNRQIEQCGYRLISTRRH
Ga0318546_100759621	3300031771	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQIE
Ga0318557_102165962	3300031795	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQMEQCGYR
Ga0307473_107127453	3300031820	Hardwood Forest Soil	MPKDTFAREQEMVIQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTQRH
Ga0318511_102184701	3300031845	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQMEQCGYRLV
Ga0306919_101627492	3300031879	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNREIEQCGYRLVRTRRH
Ga0306919_109260362	3300031879	Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFAGLINSLSSAPDVVDVVNRQIEQCGYWLIRIRRH
Ga0306919_113030261	3300031879	Soil	MPKDPLAREQEMVVQVACQALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSLSSAPYIVDVVNRQIEQCGYRVVRTRQLVS
Ga0306925_102152411	3300031890	Soil	MVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQIEQCGYRLVRTRRH
Ga0318551_104398562	3300031896	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQMEQCGYRLVRTRRH
Ga0306923_101766531	3300031910	Soil	MPKDPLAREQEMVIQVARHALTRTIEQYSPVGTDTLPITTAAISRMFADLINSLSSASDIVDVVNRQIEQSGYRLVETRRH
Ga0306923_110226241	3300031910	Soil	REQEIVIQVARHALTRTIEQYSPVGTDTLPIATVAVSRMFADLINSLSSAADIVDVVNRQIEQSGYRLIRTRGH
Ga0306923_112859422	3300031910	Soil	MVVQVACHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIQQCGYRLISARRH
Ga0306921_111232052	3300031912	Soil	MPKDPLAREQEMVVQVACHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIQQCGYRLISARRH
Ga0306926_108497811	3300031954	Soil	MPKDPLAREQEMVVQVACHVLTRTIQQYSPVGTDTLPIVAVSQMFADLISNLSSAPEIVDIVNRQIQQCGYRLISARRH
Ga0307479_108337081	3300031962	Hardwood Forest Soil	MPKDLLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLIRHAAALKNVLS
Ga0318531_101519761	3300031981	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQIEQCGYRLVR
Ga0306922_113602431	3300032001	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQ
Ga0318569_100319911	3300032010	Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQIEQCGYR
Ga0310911_100591541	3300032035	Soil	QVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINSHSSAPDIVDIVNRQIEQCGYRLVRTRRH
Ga0318545_101661721	3300032042	Soil	MPKDPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFADLINSLSSAPDVIEIVNRQIEKCGCRLIQTRRH
Ga0318556_102689032	3300032043	Soil	MPKNPLAREQEMVIQVACHALTRTIEQYSPVGTDTLPIATAAISRMFADLINSLSSAPDVIEIVNRQIE
Ga0318533_107086162	3300032059	Soil	MPKDPLAREQEMVVQVACHALTRTIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIQQCGYRRH
Ga0307470_103413542	3300032174	Hardwood Forest Soil	MPKDPLAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH
Ga0307470_111188402	3300032174	Hardwood Forest Soil	MPKDPLAREREMVVQVACHALTRTIEQYSPVGTDTLPIAAVAISRMFADLINGLSSASEIVDVVNRQIERCGYRLVSTRRH
Ga0307471_1010468572	3300032180	Hardwood Forest Soil	EMVIQVACHALTRTIEQYSPVGADTLPIAAVAISRMFADLINNLSGAPEIVDIVNRQIEQCGYRLTRRH
Ga0307471_1028727751	3300032180	Hardwood Forest Soil	MPKDTFAREQEMVVQVACHALTRTIEQYSPVGTDTLPIAVVAISRMFADLINGLSSASEIVDVVNRQIERCGYRLVSTRRH
Ga0307472_1010028192	3300032205	Hardwood Forest Soil	MPKDPLAREQEMVVQVACHALTRAIEQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIEQCGYRLISTRRH
Ga0306920_1013903701	3300032261	Soil	MPKDPLAREQEMVVQVARQALTRTIEQYSPVGTDTLPIATVAISRMFADLINNLSGAADIVDIINRQIEQTGYRLIETRQH
Ga0306920_1033052851	3300032261	Soil	QEMVVQVACHALTRPIQQYSPVGTDTLPIAAVAISRMFADLINNLSSAPEIVDIVNRQIQQCGYRLISARRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084989

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences